WERAM Information


Tag Content
WERAM ID WERAM-Viv-0105
Ensembl Protein ID VIT_17s0000g04120.t01
Gene Name VIT_17s0000g04120
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
VIT_17s0000g04120 VIT_17s0000g04120.t01 VIT_17s0000g04120.t01
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 2.40e-114 382.4 293 605
HDAC Class-I 4.60e-34 119 419 599
Organism Vitis vinifera
Domain Profile
  HDAC Class-II

            class-2.txt   2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeaglle.kleelkarkatkeelqlvHseehvelletaeklekeelesltvd 88 
+++ +de+ml h+ +e +++ hpE+p+R++ai +l++ag+ + k+ + ar+ t+eelq+vHs ehve++e +++ ++
VIT_17s0000g04120.t01 293 TAVGFDERMLLHSEVEMKSHPHPERPDRLRAIAASLATAGIFPgKCYPILAREITREELQMVHSLEHVETVELTSRILSSYF------ 374
6799***********************************999779**************************99954444433...... PP
class-2.txt 89 sdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkilivDwDvHhGn 176
+ ++y++++s+ aarla+G + +l++++++g++kngfa+vRPPGHHa s+amGFCl+nn+avaa + q +k++livDwDvHhGn
VIT_17s0000g04120.t01 375 TPDTYANEHSALAARLAAGLCADLASAIFSGRAKNGFALVRPPGHHAGVSQAMGFCLHNNAAVAAL-ASQVSGAKRVLIVDWDVHHGN 461
4589***********************************************************995.5666667************** PP
class-2.txt 177 GtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfD 264
Gtqeif+++++vly+SlHR++ g+f+p g+ga +evg+ +eg+ vN++w+ g++gd++y++af++vvlpia+eF+Pd+ ++saGfD
VIT_17s0000g04120.t01 462 GTQEIFEQNKSVLYISLHRHEGGNFYP--GTGASHEVGSMGAEGYCVNIPWSRGGVGDNDYIFAFQHVVLPIASEFAPDFTIISAGFD 547
***************************..*********************************************************** PP
class-2.txt 265 aaegdplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322
aa+gdplg ++vt++++a++t +l l+gg+++++lEGGynl++i+++++av+k+Llg
VIT_17s0000g04120.t01 548 AARGDPLGCCDVTPAGFAKMTDMLNVLSGGKLLVILEGGYNLRSISSSATAVIKVLLG 605
********************************************************96 PP

  HDAC Class-I

            class-1.txt 132 hhakkseasGfcyvnDivlailellk.khkrvlyididlhhGDgveeafyttdrvmtvsfhkyge.effPgtGdlsdvgaekgkyyav 217
hha s+a Gfc n+ +a l + krvl +d d+hhG+g +e f++ + v+ +s+h+++ +f+PgtG ++vg y+v
VIT_17s0000g04120.t01 419 HHAGVSQAMGFCLHNNAAVAALASQVsGAKRVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEGgNFYPGTGASHEVGSMGAEGYCV 506
*************9998887776554389*********************************97527********************* PP
class-1.txt 218 nvPl.kdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksf.nlpllvlGGGGYtlrnvaR 303
n+P + g+ D+ y f++v+ ++ + f P+ ++ G D+ gD+lg+ +++ g+a++ +++ +llv+ GGY+lr ++
VIT_17s0000g04120.t01 507 NIPWsRGGVGDNDYIFAFQHVVLPIASEFAPDFTIISAGFDAARGDPLGCCDVTPAGFAKMTDMLNVLsGGKLLVILEGGYNLRSISS 594
***83568**********************************************************9977899***********9997 PP
class-1.txt 304 cwtye 308
t
VIT_17s0000g04120.t01 595 SATAV 599
76655 PP

Protein Sequence
(Fasta)
MNKLIGMDII GETKYKYNKI EGLNAKSPAL NELDRYGAQS PSSLPEFAVS IRAALPGSLS 60
GAKVWPSKCK RTCSSFMRGC DQNQDLHEGM ILNETCYVNS EHNMVSETLQ NTRLMDGKAE 120
NNLHDQNDQI LLEGFNGQHE NVGLDGINAT PCSDENCREE NTSGTSSRDM ADNLNGSMLP 180
DIISKRVRQQ KEMTLEDMYN DQYDYDDDDD SDWEPLPGPT AVIRWFCVNC TMANQDDVVH 240
CDICGEHKES GILKHGFFAS PFSQEAGLIH TDSEVVERCQ DSRSPNLTSN NSTAVGFDER 300
MLLHSEVEMK SHPHPERPDR LRAIAASLAT AGIFPGKCYP ILAREITREE LQMVHSLEHV 360
ETVELTSRIL SSYFTPDTYA NEHSALAARL AAGLCADLAS AIFSGRAKNG FALVRPPGHH 420
AGVSQAMGFC LHNNAAVAAL ASQVSGAKRV LIVDWDVHHG NGTQEIFEQN KSVLYISLHR 480
HEGGNFYPGT GASHEVGSMG AEGYCVNIPW SRGGVGDNDY IFAFQHVVLP IASEFAPDFT 540
IISAGFDAAR GDPLGCCDVT PAGFAKMTDM LNVLSGGKLL VILEGGYNLR SISSSATAVI 600
KVLLGETPGC ELDNCLPSKS GLRTVLEVLK IQMNFWSTLA STLTKLESEW GSCLVENRKK 660
HTKKRRRAVA PKPWKWGRKT LLYHLLSGHL RYKSKRI 697
Nucleotide Sequence
(Fasta)
ATGAATAAAT TGATAGGAAT GGATATAATT GGTGAGACAA AGTACAAATA CAACAAAATA 60
GAGGGGTTAA ATGCAAAATC TCCGGCTCTC AACGAGTTAG ATCGATACGG GGCTCAGTCA 120
CCTTCCTCGC TGCCCGAATT TGCTGTGAGC ATCAGAGCTG CTCTACCAGG GTCACTCTCT 180
GGTGCCAAGG TCTGGCCTTC CAAGTGCAAA AGAACATGTT CGAGTTTTAT GAGGGGATGT 240
GACCAGAACC AGGATCTTCA TGAAGGAATG ATTCTGAATG AAACTTGTTA TGTGAATTCT 300
GAACATAACA TGGTCTCGGA AACGCTACAA AATACTCGGC TGATGGATGG AAAGGCTGAA 360
AACAATCTTC ATGATCAAAA TGATCAAATT CTACTGGAAG GCTTTAATGG ACAGCATGAA 420
AATGTGGGGT TGGATGGGAT TAATGCTACT CCCTGTTCTG ATGAAAATTG TCGGGAAGAA 480
AATACATCAG GAACATCCAG TAGAGATATG GCAGACAATC TAAATGGAAG CATGCTACCA 540
GATATTATAT CTAAAAGAGT GAGGCAGCAG AAAGAAATGA CTTTGGAAGA TATGTATAAT 600
GACCAATATG ATTATGATGA TGACGATGAT AGTGATTGGG AGCCCTTGCC GGGGCCTACA 660
GCAGTCATAA GGTGGTTTTG TGTCAATTGT ACGATGGCTA ACCAAGACGA TGTTGTACAT 720
TGTGATATAT GTGGGGAACA TAAAGAATCC GGAATCCTCA AGCATGGGTT TTTTGCATCA 780
CCTTTTTCAC AAGAAGCAGG CCTTATTCAT ACTGATTCAG AAGTAGTAGA AAGATGCCAA 840
GACTCACGCT CACCAAATCT CACCTCAAAC AACTCCACTG CTGTGGGTTT TGATGAGAGA 900
ATGTTGCTGC ACTCTGAAGT TGAAATGAAG TCACACCCAC ACCCAGAAAG GCCAGACCGT 960
CTTCGAGCTA TTGCTGCTAG CCTTGCTACT GCAGGTATAT TTCCTGGAAA ATGCTACCCA 1020
ATTTTGGCAA GAGAGATTAC TCGAGAAGAA CTGCAGATGG TCCATTCTTT GGAGCATGTT 1080
GAAACTGTAG AACTTACAAG CCGTATTCTT TCGAGTTATT TCACTCCTGA TACATATGCT 1140
AATGAGCATT CAGCACTTGC TGCTCGGCTT GCAGCTGGTT TATGTGCTGA TCTTGCTTCT 1200
GCAATTTTTT CTGGACGTGC CAAAAATGGT TTTGCTTTGG TTCGCCCTCC TGGTCATCAT 1260
GCTGGTGTTA GTCAGGCGAT GGGGTTCTGC CTCCACAATA ATGCGGCGGT TGCTGCACTA 1320
GCTTCACAGG TTTCAGGGGC TAAGAGGGTG CTAATTGTTG ATTGGGATGT ACATCACGGA 1380
AATGGCACAC AAGAGATATT TGAGCAGAAC AAATCGGTTT TGTATATATC CTTGCATAGA 1440
CATGAAGGGG GAAACTTCTA TCCTGGTACT GGGGCATCAC ACGAGGTGGG CAGTATGGGT 1500
GCAGAAGGAT ACTGTGTGAA TATTCCATGG AGTCGTGGAG GAGTTGGGGA CAATGATTAT 1560
ATTTTTGCAT TCCAGCATGT TGTGCTTCCT ATAGCTTCTG AGTTTGCTCC TGATTTCACC 1620
ATAATATCAG CAGGATTTGA TGCTGCAAGG GGTGATCCCC TTGGTTGCTG TGATGTAACA 1680
CCTGCTGGCT TTGCAAAGAT GACAGATATG TTGAATGTTC TCTCTGGTGG AAAGTTGCTT 1740
GTTATTCTTG AGGGCGGCTA TAATCTTCGT TCAATATCAT CATCTGCCAC TGCAGTGATC 1800
AAGGTACTGC TTGGTGAAAC TCCTGGATGC GAATTGGATA ACTGCTTGCC TTCCAAGTCT 1860
GGCTTGCGAA CTGTTCTGGA AGTCCTGAAA ATTCAGATGA ACTTCTGGTC TACTCTGGCA 1920
TCGACCCTTA CAAAATTGGA GTCAGAATGG GGATCATGTT TAGTTGAAAA CCGAAAAAAG 1980
CATACTAAAA AGAGACGGCG GGCTGTGGCA CCAAAACCAT GGAAATGGGG GCGAAAAACT 2040
TTGTTATATC ATCTTCTGTC TGGCCATCTT CGTTACAAAT CAAAGCGGAT TTAGGTGACT 2100
TCATAGATCT GATTTTTACG CATATGCTTC TTTTACTTGT AATTTTCCCT TTATGCACCC 2160
TTGTATACCA GCTAGTTTCA GGGTAATTTC CTTTTTGTAT GAAATGACGG CTTAATTATA 2220
TTCAAGTGCT TCAGGATAAC TTCTTTTTTC TCATGAAGTC TAATTGTAAT CATGGTTTTA 2280
CATTTCCCTC CCCTTTTCCT TCTACCAGAA GGGGGGA 2318
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Thc-0030 EOY20940 Theobroma cacao 72 0.0 791
WERAM-Prp-0050 EMJ11455 Prunus persica 73 0.0 783
WERAM-Sot-0015 PGSC0003DMT400014582 Solanum tuberosum 67 0.0 740
WERAM-Pot-0130 POPTR_0012s05730.1 Populus trichocarpa 67 0.0 735
WERAM-Sol-0057 Solyc03g119730.2.1 Solanum lycopersicum 66 0.0 728
WERAM-Met-0113 KEH32089 Medicago truncatula 69 0.0 677
WERAM-Art-0072 AT3G18520.1 Arabidopsis thaliana 65 0.0 658
WERAM-Glm-0224 GLYMA17G13000.1 Glycine max 69 0.0 653
WERAM-Arl-0060 fgenesh2_kg.3__ 2057__ AT3G18520.1 Arabidopsis lyrata 67 0.0 648
WERAM-Bro-0099 Bo5g118460.1 Brassica oleracea 71 0.0 642
WERAM-Brr-0115 Bra022329.1-P Brassica rapa 71 0.0 633
WERAM-Amt-0097 ERN15947 Amborella trichopoda 69 1e-179 627
WERAM-Mua-0121 GSMUA_Achr8P20260_001 Musa acuminata 66 4e-176 615
WERAM-Orbr-0079 OB07G13070.1 Oryza brachyantha 64 8e-155 545
WERAM-Org-0071 ORGLA07G0034700.1 Oryza glaberrima 62 2e-154 543
WERAM-Orb-0071 OBART07G04070.1 Oryza barthii 62 5e-154 542
WERAM-Orp-0068 OPUNC07G03920.1 Oryza punctata 64 5e-153 539
WERAM-Orni-0070 ONIVA07G02650.1 Oryza nivara 63 1e-151 534
WERAM-Sem-0037 EFJ34365 Selaginella moellendorffii 62 4e-151 532
WERAM-Tra-0242 Traes_5DS_18DC37E47.1 Triticum aestivum 65 4e-151 532
WERAM-Orl-0056 KN539089.1_FGP007 Oryza longistaminata 63 8e-151 531
WERAM-Orr-0073 ORUFI07G03770.1 Oryza rufipogon 62 2e-149 527
WERAM-Orgl-0069 OGLUM07G03480.1 Oryza glumaepatula 62 2e-149 526
WERAM-Zem-0064 GRMZM2G107309_P01 Zea mays 63 3e-149 526
WERAM-Ors-0064 OS07T0164100-01 Oryza sativa 62 8e-149 525
WERAM-Ori-0081 BGIOSGA024767-PA Oryza indica 62 8e-149 525
WERAM-Sob-0016 Sb02g003690.1 Sorghum bicolor 62 2e-148 523
WERAM-Sei-0111 Si029194m Setaria italica 63 3e-146 516
WERAM-Lep-0070 LPERR07G03600.1 Leersia perrieri 61 5e-146 515
WERAM-Tru-0033 TRIUR3_17245-P1 Triticum urartu 59 4e-141 499
WERAM-Aet-0038 EMT15178 Aegilops tauschii 59 2e-138 490
WERAM-Hov-0036 MLOC_37038.1 Hordeum vulgare 70 2e-137 487
WERAM-Php-0023 PP1S145_70V6.1 Physcomitrella patens 54 3e-128 456
WERAM-Brd-0030 BRADI1G56740.2 Brachypodium distachyon 68 4e-101 366
WERAM-Orm-0067 OMERI07G02600.4 Oryza meridionalis 55 6e-81 299
WERAM-Xim-0160 ENSXMAP00000013063.1 Xiphophorus maculatus 44 1e-77 288
WERAM-Caa-0034 KGT64501 Candida albicans 44 2e-77 287
WERAM-Pof-0022 ENSPFOP00000001799.2 Poecilia formosa 44 3e-77 287
WERAM-Kop-0012 CAY68916 Komagataella pastoris 43 1e-76 285
WERAM-Mel-0037 EGG03660 Melampsora laricipopulina 46 2e-76 284
WERAM-Ran-0209 ENSRNOP00000009295.5 Rattus norvegicus 44 2e-76 284
WERAM-Orn-0011 ENSONIP00000001061.1 Oreochromis niloticus 44 6e-76 283
WERAM-Miv-0034 MVLG_04888T0 Microbotryum violaceum 42 9e-76 282
WERAM-Asm-0181 ENSAMXP00000017644.1 Astyanax mexicanus 46 1e-75 281
WERAM-Pug-0031 EFP89333 Puccinia graminis 44 1e-75 281
WERAM-Tum-0026 CAZ84932 Tuber melanosporum 44 2e-75 281
WERAM-Coi-0028 EAS30926 Coccidioides immitis 44 5e-75 280
WERAM-Mum-0115 ENSMUSP00000033501.8 Mus musculus 44 7e-75 279
WERAM-Asn-0017 CADANIAP00004063 Aspergillus nidulans 42 1e-74 278
WERAM-Tar-0042 ENSTRUP00000010127.1 Takifugu rubripes 41 1e-74 278
WERAM-Ten-0019 ENSTNIP00000004593.1 Tetraodon nigroviridis 45 2e-74 277
WERAM-Yal-0023 CAG79971 Yarrowia lipolytica 43 3e-74 277
WERAM-Xet-0155 ENSXETP00000050501.3 Xenopus tropicalis 44 4e-74 276
WERAM-Dar-0023 ENSDARP00000124246.1 Danio rerio 45 5e-74 276
WERAM-Mod-0081 ENSMODP00000012731.2 Monodelphis domestica 45 6e-74 276
WERAM-Orc-0102 ENSOCUP00000008741.3 Oryctolagus cuniculus 43 7e-74 276
WERAM-Scj-0031 EEB08679 Schizosaccharomyces japonicus 43 9e-74 275
WERAM-Asc-0002 CADACLAP00000048 Aspergillus clavatus 41 1e-73 275
WERAM-Usm-0012 UM02102P0 Ustilago maydis 43 1e-73 275
WERAM-Ast-0014 CADATEAP00005667 Aspergillus terreus 43 2e-73 274
WERAM-Mae-0111 ENSMEUP00000010640.1 Macropus eugenii 44 3e-73 273
WERAM-Ict-0125 ENSSTOP00000012693.2 Ictidomys tridecemlineatus 41 3e-73 273
WERAM-Aim-0139 ENSAMEP00000013236.1 Ailuropoda melanoleuca 43 2e-72 271
WERAM-Zyt-0016 Mycgr3P37223 Zymoseptoria tritici 40 4e-72 270
WERAM-Fec-0031 ENSFCAP00000002366.3 Felis catus 43 4e-72 270
WERAM-Crn-0010 AAW42071 Cryptococcus neoformans 47 4e-72 270
WERAM-Scp-0036 SPBC800.03.1:pep Schizosaccharomyces pombe 45 5e-72 270
WERAM-Asg-0010 AAS51704 Ashbya gossypii 43 6e-72 269
WERAM-Anc-0082 ENSACAP00000007918.3 Anolis carolinensis 43 8e-72 269
WERAM-Sac-0037 YNL021W Saccharomyces cerevisiae 42 8e-72 269
WERAM-Cag-0018 CAG60803 Candida glabrata 42 1e-71 268
WERAM-Myl-0104 ENSMLUP00000008295.2 Myotis lucifugus 41 2e-71 268
WERAM-Eqc-0001 ENSECAP00000001121.1 Equus caballus 43 2e-71 268
WERAM-Pytr-0015 EDU46537 Pyrenophora triticirepentis 42 2e-71 267
WERAM-Lac-0055 ENSLACP00000007918.1 Latimeria chalumnae 43 4e-71 266
WERAM-Spr-0021 CBQ72644 Sporisorium reilianum 44 4e-71 266
WERAM-Mup-0158 ENSMPUP00000013557.1 Mustela putorius furo 44 5e-71 266
WERAM-Ocp-0057 ENSOPRP00000005096.1 Ochotona princeps 42 5e-71 266
WERAM-Sus-0177 ENSSSCP00000022636.1 Sus scrofa 41 5e-71 266
WERAM-Sah-0012 ENSSHAP00000001165.1 Sarcophilus harrisii 45 5e-71 266
WERAM-Put-0014 PTTG_07163P0 Puccinia triticina 44 8e-71 265
WERAM-Pyt-0023 EFQ89752 Pyrenophora teres 42 9e-71 265
WERAM-Otg-0144 ENSOGAP00000012420.2 Otolemur garnettii 44 1e-70 265
WERAM-Lem-0023 CBX90551 Leptosphaeria maculans 42 2e-70 264
WERAM-Aso-0015 CADAORAP00001816 Aspergillus oryzae 41 3e-70 263
WERAM-Caf-0161 ENSCAFP00000022990.3 Canis familiaris 43 3e-70 263
WERAM-Prc-0036 ENSPCAP00000003334.1 Procavia capensis 42 4e-70 263
WERAM-Kll-0020 CAG99415 Kluyveromyces lactis 40 1e-69 262
WERAM-Ova-0124 ENSOARP00000012678.1 Ovis aries 42 1e-69 261
WERAM-Cap-0109 ENSCPOP00000008049.2 Cavia porcellus 42 2e-69 261
WERAM-Dio-0075 ENSDORP00000007462.1 Dipodomys ordii 41 4e-69 260
WERAM-Cae-0060 F41H10.6b Caenorhabditis elegans 43 6e-69 259
WERAM-Gog-0047 ENSGGOP00000004443.2 Gorilla gorilla 42 8e-69 259
WERAM-Mam-0153 ENSMMUP00000021637.2 Macaca mulatta 42 8e-69 259
WERAM-Mao-0002 MGG_01076T0 Magnaporthe oryzae 40 9e-69 259
WERAM-Caj-0022 ENSCJAP00000004409.2 Callithrix jacchus 41 9e-69 259
WERAM-Hos-0047 ENSP00000365804.2 Homo sapiens 42 1e-68 258
WERAM-Chs-0158 ENSCSAP00000009365.1 Chlorocebus sabaeus 42 1e-68 258
WERAM-Orla-0013 ENSORLP00000001341.1 Oryzias latipes 41 1e-68 258
WERAM-Paa-0049 ENSPANP00000006915.1 Papio anubis 42 1e-68 258
WERAM-Bot-0122 ENSBTAP00000017618.5 Bos taurus 42 2e-68 258
WERAM-Poa-0196 ENSPPYP00000022747.2 Pongo abelii 42 2e-68 258
WERAM-Dan-0022 ENSDNOP00000002136.3 Dasypus novemcinctus 41 4e-68 256
WERAM-Lab-0047 EDQ99497 Laccaria bicolor 41 4e-68 256
WERAM-Gag-0014 GGTG_04308T0 Gaeumannomyces graminis 40 1e-67 255
WERAM-Pem-0041 ENSPMAP00000005402.1 Petromyzon marinus 40 2e-67 254
WERAM-Ved-0005 EGY17208 Verticillium dahliae 41 2e-67 254
WERAM-Tut-0056 ENSTTRP00000004443.1 Tursiops truncatus 42 2e-67 254
WERAM-Loa-0047 ENSLAFP00000003196.3 Loxodonta africana 41 2e-67 254
WERAM-Nol-0078 ENSNLEP00000009627.2 Nomascus leucogenys 43 2e-67 254
WERAM-Trv-0041 EHK18675 Trichoderma virens 41 2e-67 254
WERAM-Trr-0039 EGR46026 Trichoderma reesei 40 7e-67 252
WERAM-Pat-0185 ENSPTRP00000037550.5 Pan troglodytes 42 9e-67 252
WERAM-Chg-0033 EAQ86725 Chaetomium globosum 38 2e-66 251
WERAM-Nec-0012 EFNCRP00000001681 Neurospora crassa 39 2e-66 251
WERAM-Gaa-0053 ENSGACP00000006953.1 Gasterosteus aculeatus 40 3e-66 251
WERAM-Ptv-0077 ENSPVAP00000007213.1 Pteropus vampyrus 41 3e-66 250
WERAM-Fuo-0035 FOXG_13914P0 Fusarium oxysporum 39 7e-66 249
WERAM-Tag-0054 ENSTGUP00000003859.1 Taeniopygia guttata 42 2e-65 248
WERAM-Pes-0126 ENSPSIP00000015149.1 Pelodiscus sinensis 41 2e-65 247
WERAM-Gaga-0067 ENSGALP00000010190.4 Gallus gallus 41 5e-65 246
WERAM-Map-0033 MAPG_10880T0 Magnaporthe poae 39 5e-65 246
WERAM-Leo-0130 ENSLOCP00000016135.1 Lepisosteus oculatus 38 6e-65 246
WERAM-Fia-0117 ENSFALP00000010126.1 Ficedula albicollis 41 9e-65 245
WERAM-Meg-0108 ENSMGAP00000010913.2 Meleagris gallopavo 41 1e-64 245
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 40 3e-64 243
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 40 6e-64 243
Created Date 25-Jun-2016