WERAM Information


Tag Content
WERAM ID WERAM-Pem-0041
Ensembl Protein ID ENSPMAP00000005402.1
Gene Name hdac4
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSPMAG00000004812.1 ENSPMAT00000005422.1 ENSPMAP00000005402.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 1.40e-146 487 14 950
HDAC Class-I 1.20e-30 106.4 28 914
Organism Petromyzon marinus
Domain Profile
  HDAC Class-II

           class-2.txt 30 iqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklek 79
+q+ l +l++++ l++ + l+ ++++e+l+ H++++ + +++++++
ENSPMAP00000005402.1 14 LQTELLQLKQQHQLQQQLLLADFQQRQEQLARQHQAQLHDYIKQQQQVLA 63
56666677888777888888999999999999999988888888774333 PP
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles...... 84
+g+vyd+ mlkhq+ ++n+++hpE+++Riq+i+srlqe+gll+k+e++++rkat+ee+++vHse+h l++t+ +l++++l+s
ENSPMAP00000005402.1 609 TGVVYDSLMLKHQCSCGNNNNHPEHAGRIQSIWSRLQERGLLRKCERVRGRKATLEEIEMVHSEQHALLYSTN-PLNRQKLDSkkllgs 696
79**********************************************************************9.*************** PP
class-2.txt 85 .............ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqkl 160
l+vdsd++++e +s++aar+a+G+v el+ kv++gelkngfavvRPPGHHaees+amGFC+fn+va+aakllqqk+
ENSPMAP00000005402.1 697 lsqkmfgllpcggLGVDSDTVWNELHSASAARMAAGCVSELACKVASGELKNGFAVVRPPGHHAEESAAMGFCFFNSVAIAAKLLQQKF 785
***************************************************************************************** PP
class-2.txt 161 kvkkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafrevvl 246
+v+kili+DwDvHhGnGtq++fy d ++lylSlHRyd g+ffp gsga +evg+g+g gfnvN+aw+ggl mgdaeylaafr+vvl
ENSPMAP00000005402.1 786 NVRKILIIDWDVHHGNGTQQAFYGDASILYLSLHRYDGGNFFP--GSGASEEVGTGAGIGFNVNIAWTGGLdppMGDAEYLAAFRTVVL 872
*******************************************..******************************************** PP
class-2.txt 247 piakeFkPdlvlvsaGfDaaeg..dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322
pia+eF+Pd+vlvs+GfDaaeg plgg++v+akc+++lt+ql++laggrvv++lEGG++l ai++++e++++aLlg
ENSPMAP00000005402.1 873 PIANEFSPDVVLVSSGFDAAEGhpPPLGGYKVSAKCFGHLTRQLMGLAGGRVVMALEGGHDLAAICDGSESCISALLG 950
**********************9999**************************************************96 PP

  HDAC Class-I

           class-1.txt 30 theLvlnyglskkleivkpkkasaeellkfhseeyieflkkv 71
++L+l+ +++ ++ + ++a+ ++++k ++ +v
ENSPMAP00000005402.1 28 QQQLLLADFQQRQEQLARQHQAQLHDYIKQQQ--------QV 61
33333333333334444444444444443333........22 PP
class-1.txt 17 gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae.........elskelkkf......nvge 90
+++hp r++ + + + + gl +k e+v+ +ka+ ee+ +hse++ +l + +p n + +l ++k f ++g
ENSPMAP00000005402.1 627 NNNHPEHAGRIQSIWSRLQERGLLRKCERVRGRKATLEEIEMVHSEQHA-LLYSTNPLNRQkldskkllgSL--SQKMFgllpcgGLGV 712
678999999***99999***************************98764.3344444333323333344422..334441122223555 PP
class-1.txt 91 dc.Pvfdglfey..cqlitGasleaakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellkkhk..rvlyididlhhG 172
d+ v ++l++ +++ +G e a k+ ++e + a+ G hha s a Gfc+ n + +a l++k++ ++l id d+hhG
ENSPMAP00000005402.1 713 DSdTVWNELHSAsaARMAAGCVSELACKVASGELKngFAVVRPPG-HHAEESAAMGFCFFNSVAIAAKLLQQKFNvrKILIIDWDVHHG 800
652488888865114566777778888998887661255555555.********************999999764449*********** PP
class-1.txt 173 Dgveeafyttdrvmtvsfhkyge.effPgtGdlsdvgaekgkyyavnvPlkdgid....DesyekifksviskvieafePeavvlqcGa 256
+g ++afy ++ +s+h+y+ +ffPg+G ++vg++ g + vn+ + g+d D +y + f++v+ ++ + f+P++v++ G
ENSPMAP00000005402.1 801 NGTQQAFYGDASILYLSLHRYDGgNFFPGSGASEEVGTGAGIGFNVNIAWTGGLDppmgDAEYLAAFRTVVLPIANEFSPDVVLVSSGF 889
*********************7527***********************988887666669***************************** PP
class-1.txt 257 DslagD..rlgefnlsikghaecvk 279
D+ g +lg +++s k +++ +
ENSPMAP00000005402.1 890 DAAEGHppPLGGYKVSAKCFGHLTR 914
**99863369999999998887655 PP

Protein Sequence
(Fasta)
TMPAVDPAAR EQQLQTELLQ LKQQHQLQQQ LLLADFQQRQ EQLARQHQAQ LHDYIKQQQQ 60
VLALKKQQEL LAVQRRERER LEQQKRELEL ELELESQRHE QHLQVLRNKE RGRESAVASS 120
EVKQRLQEFV LSKKQREAAG GSISIPLSQQ YKLWYLMPHY GSLDQNSTQQ NMSPPNYQQS 180
LGTYDPNNDF PLRKTASEPN LKLRSRLKQK VAERRSSPLL RRKGPMSAAV AAKKRPMEMA 240
DSSCQSPLSG SAPGSGPSSP GNSTGGGIAT ENGTAGPHLP SQPEHALTQR QTMAPEGVAC 300
PLSLYTSPSL PNISLGLPLS MTAHNSQLTQ QQAERVAMPV PPSHLSVLPP LWLLPTQPPP 360
PPSAVPHPPA LHLSLDSPPP PPPAALGLQP LSLAPFSPNR SSPQRARLPR HRSLSRTHSA 420
PLPTCPQALQ QLVLQQQHQQ FLERQKQQLG KEVVLQLRDS PPRGTETAQA REAEPTAMHE 480
ESGGAGRGDG GGVGRGHGGR PGDSVGGQVV VKQEPVDVEQ EEDGEVEVGQ QQGSRVESLS 540
GHQALLLEQQ RAQHHQQMRV YQGQIASGGL QFRPPSHRPL FRTQSSPACT LFAQAGGQEQ 600
ATTKLRFTTG VVYDSLMLKH QCSCGNNNNH PEHAGRIQSI WSRLQERGLL RKCERVRGRK 660
ATLEEIEMVH SEQHALLYST NPLNRQKLDS KKLLGSLSQK MFGLLPCGGL GVDSDTVWNE 720
LHSASAARMA AGCVSELACK VASGELKNGF AVVRPPGHHA EESAAMGFCF FNSVAIAAKL 780
LQQKFNVRKI LIIDWDVHHG NGTQQAFYGD ASILYLSLHR YDGGNFFPGS GASEEVGTGA 840
GIGFNVNIAW TGGLDPPMGD AEYLAAFRTV VLPIANEFSP DVVLVSSGFD AAEGHPPPLG 900
GYKVSAKCFG HLTRQLMGLA GGRVVMALEG GHDLAAICDG SESCISALLG NELEPLSMDI 960
LQQQPNPNAV VSLEKVIDIQ SKYWKSVAHF ASNVGHSLVE SQQHEVEETE TITALASLSM 1020
DVEQA 1025
Nucleotide Sequence
(Fasta)
ACGATGCCAG CCGTGGACCC TGCAGCGCGT GAGCAGCAGC TGCAGACTGA GCTGCTGCAG 60
CTGAAGCAGC AGCACCAGCT TCAGCAGCAG CTGCTGCTCG CAGATTTCCA GCAGAGGCAG 120
GAACAGCTGG CCCGGCAACA CCAGGCTCAG CTCCATGACT ACATCAAGCA GCAGCAGCAG 180
GTGCTGGCGC TCAAGAAGCA GCAGGAGCTG CTTGCCGTGC AGAGGCGCGA GCGCGAGCGG 240
CTGGAACAGC AGAAGCGGGA GCTGGAGCTC GAGCTGGAGC TCGAGAGCCA GCGGCACGAG 300
CAGCACCTGC AGGTGCTGCG CAACAAGGAG CGTGGGCGAG AGAGTGCAGT GGCAAGCTCC 360
GAGGTGAAGC AGAGGCTACA GGAGTTTGTT CTCAGCAAAA AGCAGAGGGA GGCGGCTGGA 420
GGCTCGATCA GCATACCCCT GTCTCAGCAG TACAAACTCT GGTACCTGAT GCCCCATTAC 480
GGATCCTTGG ACCAGAATTC CACGCAACAA AATATGTCGC CACCCAACTA TCAGCAGTCT 540
CTCGGCACTT ATGACCCAAA CAATGATTTT CCTCTCCGTA AAACAGCGTC GGAGCCAAAC 600
CTAAAACTGC GCTCACGGCT TAAACAGAAG GTGGCGGAGC GGAGGAGCAG CCCACTGTTG 660
CGCCGGAAGG GGCCCATGTC TGCTGCCGTA GCTGCCAAGA AGAGGCCAAT GGAGATGGCG 720
GACAGCTCGT GTCAATCCCC GCTGAGCGGC AGTGCGCCTG GTTCAGGTCC CAGCTCCCCC 780
GGCAACAGCA CGGGCGGCGG CATCGCCACC GAGAACGGAA CAGCGGGGCC CCACCTGCCC 840
TCCCAGCCAG AGCATGCCTT AACCCAGCGT CAAACAATGG CACCTGAAGG AGTAGCATGT 900
CCCCTGAGCC TCTATACTTC TCCCTCGCTG CCCAACATCT CACTGGGCCT GCCCCTCTCA 960
ATGACCGCTC ACAACTCGCA GCTGACGCAA CAGCAGGCAG AGCGAGTGGC AATGCCGGTG 1020
CCACCCTCCC ATCTTTCCGT GTTGCCACCA CTCTGGCTGT TACCCACCCA ACCCCCCCCC 1080
CCCCCATCTG CCGTCCCACA CCCTCCCGCT CTCCACCTTT CACTTGACTC CCCCCCTCCC 1140
CCACCGCCCG CTGCACTTGG CTTACAACCC CTTTCTCTCG CTCCTTTTTC CCCCAACCGA 1200
TCCTCACCGC AGCGTGCCCG GCTGCCGCGG CACCGCAGCC TGAGCCGCAC TCACTCGGCG 1260
CCGCTGCCCA CGTGCCCTCA GGCCCTGCAG CAGCTGGTCC TGCAGCAGCA GCACCAGCAG 1320
TTCCTGGAAC GTCAGAAGCA GCAGCTTGGC AAGGAGGTCG TTTTGCAACT GAGGGACAGC 1380
CCGCCCCGGG GCACCGAGAC GGCCCAGGCC AGGGAGGCCG AGCCCACGGC TATGCACGAG 1440
GAGAGCGGTG GGGCCGGCCG GGGCGACGGC GGCGGGGTCG GGAGGGGCCA CGGCGGCCGC 1500
CCCGGGGACT CCGTGGGGGG TCAGGTCGTG GTCAAACAGG AGCCCGTCGA CGTGGAGCAG 1560
GAGGAGGACG GGGAGGTGGA GGTGGGGCAG CAGCAGGGCT CTAGAGTCGA GAGCCTATCG 1620
GGTCACCAGG CGCTGTTGCT GGAGCAGCAG AGAGCCCAGC ACCACCAACA GATGAGGGTT 1680
TACCAGGGCC AGATCGCGTC CGGGGGGCTG CAGTTCCGCC CGCCGTCCCA CCGGCCCCTC 1740
TTCCGCACGC AGTCCTCCCC AGCGTGCACG CTCTTCGCGC AGGCCGGCGG ACAGGAGCAG 1800
GCGACCACCA AGCTGAGATT CACCACAGGA GTGGTGTACG ACTCCCTCAT GCTCAAGCAC 1860
CAGTGCTCCT GCGGAAACAA CAACAACCAC CCCGAGCACG CAGGGAGGAT ACAGAGCATT 1920
TGGTCTCGGC TGCAGGAGAG GGGCCTCCTC CGCAAGTGTG AGAGGGTACG TGGTCGGAAA 1980
GCAACTCTGG AGGAAATTGA GATGGTACAT TCTGAACAGC ACGCTCTTCT CTACAGCACT 2040
AACCCACTCA ACCGACAAAA GCTCGACAGC AAGAAACTGC TCGGCTCCCT ATCCCAGAAG 2100
ATGTTTGGAC TGCTCCCTTG TGGCGGCCTC GGGGTGGACA GCGACACGGT TTGGAACGAG 2160
CTGCATTCAG CCAGCGCCGC ACGGATGGCG GCCGGCTGCG TGAGCGAACT CGCATGCAAG 2220
GTGGCCTCGG GGGAGCTGAA GAACGGCTTT GCCGTGGTGC GACCCCCGGG TCACCATGCT 2280
GAAGAATCGG CCGCTATGGG TTTTTGTTTT TTTAACTCCG TGGCCATCGC GGCAAAGCTG 2340
TTGCAGCAGA AGTTCAACGT GAGGAAGATT CTCATCATCG ACTGGGACGT ACACCACGGC 2400
AACGGGACGC AGCAGGCGTT CTACGGCGAC GCCTCCATCC TCTACCTCTC CCTGCACCGC 2460
TACGACGGAG GGAACTTCTT CCCGGGGAGT GGGGCGTCAG AGGAGGTTGG CACAGGGGCT 2520
GGCATCGGCT TCAATGTGAA CATCGCCTGG ACAGGAGGGC TGGACCCTCC CATGGGGGAT 2580
GCTGAGTACC TCGCAGCCTT CAGGACGGTG GTGCTACCGA TTGCCAACGA GTTCTCTCCA 2640
GACGTGGTGC TGGTCTCGTC AGGTTTTGAT GCGGCAGAGG GGCATCCACC ACCTCTTGGG 2700
GGATACAAGG TTTCAGCAAA GTGTTTTGGC CACTTGACGC GGCAGCTGAT GGGGCTGGCG 2760
GGCGGTCGCG TGGTAATGGC CCTCGAGGGT GGCCATGACC TGGCGGCTAT CTGTGACGGC 2820
TCCGAGTCCT GCATCTCGGC CCTGCTCGGC AATGAGCTGG AGCCTCTCTC CATGGACATC 2880
CTTCAACAGC AGCCCAACCC TAACGCCGTG GTCTCTCTAG AGAAGGTCAT CGACATCCAG 2940
AGCAAGTACT GGAAGTCTGT GGCCCACTTC GCCTCCAATG TTGGCCACTC CCTGGTGGAG 3000
TCACAGCAGC ACGAGGTGGA GGAGACGGAG ACCATCACCG CCCTGGCGTC GCTCTCCATG 3060
GACGTGGAGC AGGCG 3076
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 70 0.0 720
WERAM-Gaga-0049 ENSGALP00000033098.3 Gallus gallus 72 0.0 719
WERAM-Mum-0077 ENSMUSP00000008995.8 Mus musculus 70 0.0 719
WERAM-Tag-0050 ENSTGUP00000003338.1 Taeniopygia guttata 72 0.0 718
WERAM-Lac-0062 ENSLACP00000008432.1 Latimeria chalumnae 72 0.0 718
WERAM-Fia-0056 ENSFALP00000004005.1 Ficedula albicollis 72 0.0 717
WERAM-Anp-0035 ENSAPLP00000004005.1 Anas platyrhynchos 72 0.0 717
WERAM-Meg-0023 ENSMGAP00000001752.2 Meleagris gallopavo 72 0.0 717
WERAM-Ran-0135 ENSRNOP00000027622.5 Rattus norvegicus 70 0.0 715
WERAM-Cap-0143 ENSCPOP00000011770.2 Cavia porcellus 71 0.0 714
WERAM-Fec-0140 ENSFCAP00000013207.3 Felis catus 72 0.0 714
WERAM-Leo-0082 ENSLOCP00000011105.1 Lepisosteus oculatus 70 0.0 712
WERAM-Bot-0159 ENSBTAP00000023621.5 Bos taurus 72 0.0 711
WERAM-Mup-0001 ENSMPUP00000000123.1 Mustela putorius furo 71 0.0 711
WERAM-Myl-0159 ENSMLUP00000013297.2 Myotis lucifugus 70 0.0 710
WERAM-Pes-0174 ENSPSIP00000020522.1 Pelodiscus sinensis 71 0.0 710
WERAM-Ict-0095 ENSSTOP00000009983.2 Ictidomys tridecemlineatus 71 0.0 709
WERAM-Aim-0131 ENSAMEP00000011965.1 Ailuropoda melanoleuca 71 0.0 708
WERAM-Chs-0068 ENSCSAP00000002314.1 Chlorocebus sabaeus 71 0.0 704
WERAM-Sus-0169 ENSSSCP00000025173.1 Sus scrofa 72 0.0 704
WERAM-Hos-0025 ENSP00000264606.3 Homo sapiens 70 0.0 704
WERAM-Pat-0104 ENSPTRP00000022412.3 Pan troglodytes 70 0.0 703
WERAM-Otg-0061 ENSOGAP00000004404.2 Otolemur garnettii 70 0.0 702
WERAM-Anc-0099 ENSACAP00000009498.3 Anolis carolinensis 70 0.0 701
WERAM-Dar-0198 ENSDARP00000131327.1 Danio rerio 69 0.0 701
WERAM-Asm-0202 ENSAMXP00000018862.1 Astyanax mexicanus 69 0.0 699
WERAM-Paa-0012 ENSPANP00000003104.1 Papio anubis 71 0.0 699
WERAM-Loa-0107 ENSLAFP00000009167.2 Loxodonta africana 69 0.0 697
WERAM-Xet-0035 ENSXETP00000010592.2 Xenopus tropicalis 70 0.0 695
WERAM-Caj-0101 ENSCJAP00000017313.2 Callithrix jacchus 70 0.0 693
WERAM-Gog-0157 ENSGGOP00000013985.2 Gorilla gorilla 70 0.0 691
WERAM-Ova-0200 ENSOARP00000020106.1 Ovis aries 70 0.0 687
WERAM-Xim-0022 ENSXMAP00000002092.1 Xiphophorus maculatus 69 0.0 685
WERAM-Pof-0029 ENSPFOP00000001978.1 Poecilia formosa 68 0.0 684
WERAM-Orn-0049 ENSONIP00000005635.1 Oreochromis niloticus 68 0.0 682
WERAM-Ptv-0156 ENSPVAP00000012934.1 Pteropus vampyrus 71 0.0 680
WERAM-Caf-0133 ENSCAFP00000018541.3 Canis familiaris 71 0.0 679
WERAM-Ten-0099 ENSTNIP00000000138.1 Tetraodon nigroviridis 67 0.0 676
WERAM-Gaa-0020 ENSGACP00000002894.1 Gasterosteus aculeatus 68 0.0 674
WERAM-Tar-0063 ENSTRUP00000012899.1 Takifugu rubripes 69 0.0 673
WERAM-Mod-0095 ENSMODP00000032765.2 Monodelphis domestica 71 0.0 668
WERAM-Mam-0095 ENSMMUP00000014626.2 Macaca mulatta 68 0.0 667
WERAM-Nol-0183 ENSNLEP00000020216.1 Nomascus leucogenys 68 0.0 667
WERAM-Poa-0162 ENSPPYP00000019901.2 Pongo abelii 68 0.0 666
WERAM-Eqc-0153 ENSECAP00000016533.1 Equus caballus 68 0.0 665
WERAM-Orla-0199 ENSORLP00000022663.1 Oryzias latipes 68 0.0 664
WERAM-Orc-0142 ENSOCUP00000012429.3 Oryctolagus cuniculus 68 0.0 664
WERAM-Tut-0038 ENSTTRP00000002947.1 Tursiops truncatus 76 0.0 664
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 68 0.0 662
WERAM-Dio-0163 ENSDORP00000015416.1 Dipodomys ordii 70 0.0 662
WERAM-Prc-0092 ENSPCAP00000008303.1 Procavia capensis 69 0.0 661
WERAM-Dan-0156 ENSDNOP00000017844.1 Dasypus novemcinctus 70 0.0 659
WERAM-Ocp-0087 ENSOPRP00000007869.2 Ochotona princeps 69 0.0 657
WERAM-Sah-0025 ENSSHAP00000002837.1 Sarcophilus harrisii 63 1e-180 631
WERAM-Gam-0063 ENSGMOP00000006368.1 Gadus morhua 65 3e-179 626
WERAM-Ere-0042 ENSEEUP00000003697.1 Erinaceus europaeus 69 4e-179 626
WERAM-Mim-0022 ENSMICP00000002393.1 Microcebus murinus 68 1e-178 624
WERAM-Mae-0145 ENSMEUP00000015025.1 Macropus eugenii 64 2e-172 604
WERAM-Soa-0055 ENSSARP00000005400.1 Sorex araneus 70 3e-171 600
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 74 1e-163 574
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 60 6e-155 545
WERAM-Ect-0082 ENSETEP00000009275.1 Echinops telfairi 63 2e-150 531
WERAM-Tub-0129 ENSTBEP00000014362.1 Tupaia belangeri 53 3e-128 457
WERAM-Cii-0046 ENSCINP00000016829.3 Ciona intestinalis 51 3e-126 450
WERAM-Chh-0086 ENSCHOP00000009630.1 Choloepus hoffmanni 60 1e-123 441
WERAM-Cae-0008 C10E2.3a Caenorhabditis elegans 51 1e-114 412
WERAM-Cis-0060 ENSCSAVP00000013851.1 Ciona savignyi 54 3e-89 327
WERAM-Sem-0022 EFJ08599 Selaginella moellendorffii 42 2e-78 291
Created Date 25-Jun-2016