Tag |
Content |
WERAM ID |
WERAM-Php-0023 |
Ensembl Protein ID |
PP1S145_70V6.1 |
Gene Name |
HDA1501 PHYPADRAFT_138277 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
2.50e-118 |
395.8 |
147 |
455 |
HDAC |
Class-I |
1.70e-35 |
124 |
153 |
444 |
|
Organism |
Physcomitrella patens |
Domain Profile |
HDAC Class-II
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeaglle.kleelkarkatkeelqlvHseehvelletaeklekeelesltvdsdsiyle 95 +++ +de+ml h+ + ++hpE+p+R++ai++ lq++gll+ +++++ +r+at+ el+ vH+++h++ ++ + e++ l+ +t ++y++ PP1S145_70V6.1 147 TVIGFDERMLLHEETG---KSHPERPNRLRAIMEGLQASGLLSeRCFTIPSREATEAELEVVHTANHISAVQAT---ERRGLSYFT---SDTYAN 232 7889999999998765...458*****************876549***************************99...666666544...467*** PP class-2.txt 96 sksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkilivDwDvHhGnGtqeifykdpkvly 190 ++s+ aarla+G + +l++++++g++ ngfavvRPPGHHae+++ mGFCl+nnv vaa+ +q + + kk+l+vDwDvHhGnGtq+if++dp +ly PP1S145_70V6.1 233 EHSALAARLAAGICADLASAIMTGTACNGFAVVRPPGHHAEQDQVMGFCLHNNVCVAARAAQASGA-KKVLVVDWDVHHGNGTQKIFEQDPTILY 326 ***********************************************************9998877.**************************** PP class-2.txt 191 lSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgglsvtakcyatlt 285 +SlHR++ g f+p g+g +++vg+g+gegf+vN++w++g++gd++yl af+++v+pia++F+Pd+ +vsaGfDaa+gdplgg++vt+++ya++t PP1S145_70V6.1 327 ISLHRHEAGAFYP--GTGWAHHVGSGPGEGFSVNIPWSCGGIGDEDYLSAFQHIVMPIARQFEPDITIVSAGFDAASGDPLGGCDVTPEGYAQMT 419 *************..******************************************************************************** PP class-2.txt 286 kqllklaggrvvlvlEGGynlkaiaeaveavvkaLl 321 l+ la gr+++vlEGGynl++i+++++av+k+L PP1S145_70V6.1 420 SLLSFLAAGRILVVLEGGYNLRSISASAAAVMKVLR 455 ********************************9995 PP
HDAC Class-I
class-1.txt 8 dedvgeyhygqkhpmkpkrlsltheLvlnyg.lskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfey 101 + ++++ ++g++hp +p+rl+ + e + + g ls++ + +++a+ +el +h+ ++i+ ++ e + +++ ++ ++ + PP1S145_70V6.1 153 ERMLLHEETGKSHPERPNRLRAIMEGLQASGlLSERCFTIPSREATEAELEVVHTANHISAVQATERRGLSYFTS--DTYANEHSALAARLAAGI 245 5667778899**********9887766665515667777888999******************999999998884..556666655555555556 PP class-1.txt 102 cqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellk.khkrvlyididlhhGDgveeafyttdrvmtvsfhkyge 195 c+ + a ++++++ + a+ G hha +++ Gfc n++ +a + k+vl +d d+hhG+g ++ f++ ++ +s+h+++ PP1S145_70V6.1 246 CADLASAIMTGTAC-----NGFAVVRPPG-HHAEQDQVMGFCLHNNVCVAARAAQAsGAKKVLVVDWDVHHGNGTQKIFEQDPTILYISLHRHEA 334 66666555555443.....4566666665.9*****************999988775799*********************************97 PP class-1.txt 196 .effPgtGdlsdvgaekgkyyavnvPlk.dgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksf.nlp 287 f+PgtG + vg + g ++vn+P + gi De y + f++++ ++ + feP++ ++ G D+ +gD+lg +++ +g+a++ +++ PP1S145_70V6.1 335 gAFYPGTGWAHHVGSGPGEGFSVNIPWScGGIGDEDYLSAFQHIVMPIARQFEPDITIVSAGFDAASGDPLGGCDVTPEGYAQMTSLLSFLaAGR 429 359***********************98368****************************************************999887665568 PP class-1.txt 288 llvlGGGGYtlrnva 302 +lv+ GGY+lr ++ PP1S145_70V6.1 430 ILVVLEGGYNLRSIS 444 99*********9987 PP
|
Protein Sequence (Fasta) | MDANSPAEGK LDCSSCDDAV KNFVIQEEGE DIENDVHPFT AFLVSHDIED EDEDEVESED 60 EEWQPHVRWI CINCTMPNPE DEDHCWKCNE QCDSNILEQK LASVPSELTG VDGFAKSTAA 120 EELSFAERIS KNLTFSGTFV SGNEKKTVIG FDERMLLHEE TGKSHPERPN RLRAIMEGLQ 180 ASGLLSERCF TIPSREATEA ELEVVHTANH ISAVQATERR GLSYFTSDTY ANEHSALAAR 240 LAAGICADLA SAIMTGTACN GFAVVRPPGH HAEQDQVMGF CLHNNVCVAA RAAQASGAKK 300 VLVVDWDVHH GNGTQKIFEQ DPTILYISLH RHEAGAFYPG TGWAHHVGSG PGEGFSVNIP 360 WSCGGIGDED YLSAFQHIVM PIARQFEPDI TIVSAGFDAA SGDPLGGCDV TPEGYAQMTS 420 LLSFLAAGRI LVVLEGGYNL RSISASAAAV MKVLRGSNPG PLPDNLQPTP AGVGAMLDVF 480 TIQRRYWSNL HDATFLKLET LLDTWSKAGE GKGIKRRYID NPVWWKWDRK RFCADVP 537Protein Fasta Sequence
>PP1S145_70V6.1|Class-I|Physcomitrella patens MDANSPAEGKLDCSSCDDAVKNFVIQEEGEDIENDVHPFTAFLVSHDIEDEDEDEVESEDEEWQPHVRWICINCTMPNPEDEDHCWKCNEQCDSNILEQKLASVPSELTGVDGFAKSTAAEELSFAERISKNLTFSGTFVSGNEKKTVIGFDERMLLHEETGKSHPERPNRLRAIMEGLQASGLLSERCFTIPSREATEAELEVVHTANHISAVQATERRGLSYFTSDTYANEHSALAARLAAGICADLASAIMTGTACNGFAVVRPPGHHAEQDQVMGFCLHNNVCVAARAAQASGAKKVLVVDWDVHHGNGTQKIFEQDPTILYISLHRHEAGAFYPGTGWAHHVGSGPGEGFSVNIPWSCGGIGDEDYLSAFQHIVMPIARQFEPDITIVSAGFDAASGDPLGGCDVTPEGYAQMTSLLSFLAAGRILVVLEGGYNLRSISASAAAVMKVLRGSNPGPLPDNLQPTPAGVGAMLDVFTIQRRYWSNLHDATFLKLETLLDTWSKAGEGKGIKRRYIDNPVWWKWDRKRFCADVP
|
Nucleotide Sequence (Fasta) | TATGACAGAG CAATCATCTG ACAGTAGCAG ACCGGCTGTT CAGGTGAATC GAAAGTTTCC 60 TCGTCGTCGA GCTCAGTTTC TTCTCTGTGC GTGACCATCG AATGAAGTTT TCGTGAAGGC 120 ACAGTAATGG ATGCAAACAG CCCTGCAGAG GGCAAGCTGG ATTGCAGTTC ATGTGATGAT 180 GCTGTCAAGA ATTTCGTGAT TCAGGAAGAG GGGGAAGACA TAGAGAATGA CGTACATCCG 240 TTTACTGCAT TTCTTGTATC GCATGATATT GAAGACGAAG ACGAAGACGA AGTCGAGTCA 300 GAAGATGAAG AGTGGCAGCC CCATGTGCGT TGGATTTGCA TAAACTGCAC AATGCCGAAT 360 CCAGAAGATG AGGACCATTG CTGGAAGTGT AACGAACAAT GTGATTCGAA CATTTTGGAG 420 CAAAAGTTAG CGTCTGTGCC ATCCGAATTA ACAGGCGTTG ATGGGTTTGC GAAATCTACA 480 GCAGCGGAGG AGCTTAGTTT TGCAGAGAGG ATTTCGAAGA ACTTGACATT TTCAGGAACA 540 TTCGTGTCTG GAAATGAAAA GAAAACCGTT ATTGGTTTCG ACGAAAGAAT GTTATTACAT 600 GAGGAAACTG GAAAATCACA CCCTGAGCGC CCAAATCGAC TACGAGCTAT CATGGAAGGC 660 CTTCAAGCTT CTGGATTGCT CTCCGAAAGA TGTTTTACAA TACCTTCCAG AGAAGCTACT 720 GAAGCAGAAT TGGAAGTTGT CCATACTGCC AATCATATAA GTGCAGTGCA AGCTACAGAA 780 AGACGAGGCT TAAGTTACTT CACTTCTGAC ACATATGCTA ACGAACACTC TGCATTAGCG 840 GCAAGACTAG CAGCTGGAAT TTGTGCAGAT CTGGCATCAG CTATCATGAC TGGAACGGCC 900 TGCAATGGTT TTGCAGTGGT TAGGCCACCT GGACATCATG CTGAACAAGA CCAAGTCATG 960 GGATTTTGCT TGCATAACAA TGTATGCGTC GCTGCTCGAG CTGCGCAGGC TTCCGGGGCG 1020 AAGAAGGTTC TTGTTGTTGA TTGGGATGTT CACCATGGGA ATGGGACCCA AAAGATTTTT 1080 GAACAAGATC CAACAATACT GTATATCTCC CTTCATCGAC ATGAAGCTGG TGCGTTCTAT 1140 CCTGGAACTG GTTGGGCACA TCACGTGGGG AGTGGCCCTG GTGAAGGGTT TAGTGTCAAC 1200 ATACCATGGA GCTGTGGCGG AATTGGGGAC GAAGATTACC TGTCAGCATT TCAGCACATA 1260 GTCATGCCAA TTGCTCGTCA ATTTGAGCCA GATATAACAA TTGTTTCAGC TGGCTTTGAT 1320 GCCGCTAGCG GAGATCCTCT GGGAGGTTGT GATGTAACTC CTGAGGGCTA TGCACAAATG 1380 ACTTCCCTCT TGAGCTTTCT TGCAGCTGGC CGGATCCTTG TTGTCCTGGA AGGAGGTTAT 1440 AATCTGCGCT CTATTTCTGC CTCAGCAGCT GCTGTTATGA AGGTTCTTCG AGGTTCAAAC 1500 CCTGGTCCAT TGCCAGACAA TCTCCAGCCA ACTCCTGCGG GCGTAGGAGC CATGCTGGAT 1560 GTGTTCACGA TTCAGAGACG ATACTGGTCA AATCTACATG ATGCGACATT CTTAAAATTG 1620 GAAACTCTTC TAGACACTTG GTCCAAAGCT GGTGAAGGGA AAGGCATTAA ACGGCGATAC 1680 ATTGACAATC CAGTTTGGTG GAAATGGGAT CGCAAAAGGT TTTGCGCAGA TGTACCATAA 1740 AGAGGCAAAA AATTGCCTCA CAAGGGCGCT ACTATTTAGA TCTTAAGAGC AGAGTGCAAA 1800 AGCAAATCCA ATC
1814Nucleotide Fasta Sequence
>PP1S145_70V6.1|Class-I|Physcomitrella patens TATGACAGAGCAATCATCTGACAGTAGCAGACCGGCTGTTCAGGTGAATCGAAAGTTTCCTCGTCGTCGAGCTCAGTTTCTTCTCTGTGCGTGACCATCGAATGAAGTTTTCGTGAAGGCACAGTAATGGATGCAAACAGCCCTGCAGAGGGCAAGCTGGATTGCAGTTCATGTGATGATGCTGTCAAGAATTTCGTGATTCAGGAAGAGGGGGAAGACATAGAGAATGACGTACATCCGTTTACTGCATTTCTTGTATCGCATGATATTGAAGACGAAGACGAAGACGAAGTCGAGTCAGAAGATGAAGAGTGGCAGCCCCATGTGCGTTGGATTTGCATAAACTGCACAATGCCGAATCCAGAAGATGAGGACCATTGCTGGAAGTGTAACGAACAATGTGATTCGAACATTTTGGAGCAAAAGTTAGCGTCTGTGCCATCCGAATTAACAGGCGTTGATGGGTTTGCGAAATCTACAGCAGCGGAGGAGCTTAGTTTTGCAGAGAGGATTTCGAAGAACTTGACATTTTCAGGAACATTCGTGTCTGGAAATGAAAAGAAAACCGTTATTGGTTTCGACGAAAGAATGTTATTACATGAGGAAACTGGAAAATCACACCCTGAGCGCCCAAATCGACTACGAGCTATCATGGAAGGCCTTCAAGCTTCTGGATTGCTCTCCGAAAGATGTTTTACAATACCTTCCAGAGAAGCTACTGAAGCAGAATTGGAAGTTGTCCATACTGCCAATCATATAAGTGCAGTGCAAGCTACAGAAAGACGAGGCTTAAGTTACTTCACTTCTGACACATATGCTAACGAACACTCTGCATTAGCGGCAAGACTAGCAGCTGGAATTTGTGCAGATCTGGCATCAGCTATCATGACTGGAACGGCCTGCAATGGTTTTGCAGTGGTTAGGCCACCTGGACATCATGCTGAACAAGACCAAGTCATGGGATTTTGCTTGCATAACAATGTATGCGTCGCTGCTCGAGCTGCGCAGGCTTCCGGGGCGAAGAAGGTTCTTGTTGTTGATTGGGATGTTCACCATGGGAATGGGACCCAAAAGATTTTTGAACAAGATCCAACAATACTGTATATCTCCCTTCATCGACATGAAGCTGGTGCGTTCTATCCTGGAACTGGTTGGGCACATCACGTGGGGAGTGGCCCTGGTGAAGGGTTTAGTGTCAACATACCATGGAGCTGTGGCGGAATTGGGGACGAAGATTACCTGTCAGCATTTCAGCACATAGTCATGCCAATTGCTCGTCAATTTGAGCCAGATATAACAATTGTTTCAGCTGGCTTTGATGCCGCTAGCGGAGATCCTCTGGGAGGTTGTGATGTAACTCCTGAGGGCTATGCACAAATGACTTCCCTCTTGAGCTTTCTTGCAGCTGGCCGGATCCTTGTTGTCCTGGAAGGAGGTTATAATCTGCGCTCTATTTCTGCCTCAGCAGCTGCTGTTATGAAGGTTCTTCGAGGTTCAAACCCTGGTCCATTGCCAGACAATCTCCAGCCAACTCCTGCGGGCGTAGGAGCCATGCTGGATGTGTTCACGATTCAGAGACGATACTGGTCAAATCTACATGATGCGACATTCTTAAAATTGGAAACTCTTCTAGACACTTGGTCCAAAGCTGGTGAAGGGAAAGGCATTAAACGGCGATACATTGACAATCCAGTTTGGTGGAAATGGGATCGCAAAAGGTTTTGCGCAGATGTACCATAAAGAGGCAAAAAATTGCCTCACAAGGGCGCTACTATTTAGATCTTAAGAGCAGAGTGCAAAAGCAAATCCAATC
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |