Tag |
Content |
WERAM ID |
WERAM-Mua-0121 |
Ensembl Protein ID |
GSMUA_Achr8P20260_001 |
Gene Name |
|
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
8.00e-116 |
387.6 |
224 |
536 |
HDAC |
Class-I |
1.40e-35 |
124.2 |
243 |
532 |
|
Organism |
Musa acuminata |
Domain Profile |
HDAC Class-II
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeaglle.kleelkarkatkeelqlvHseehvelletaeklekeelesltvd 88 +++ +dekml h+ +e +++ hpE+p+R++ai s+l++ag+ + k+ + ar+ t+eel+ vHs +hve +++++++ + + GSMUA_Achr8P20260_001 224 TAIGFDEKMLLHAEVEMKSHPHPERPDRLRAIASSLAAAGIFPgKCSLIPAREITQEELLRVHSLDHVEAVQHTSHMLASYFT----- 306 6799***********************************999779*****************************766666555..... PP class-2.txt 89 sdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkilivDwDvHhGn 176 ++y++++s+ aar+a+G + +l++++++g++kngfa+vRPPGHHa ++amGFCl+nn+avaa +q+ +kk+livDwDvHhGn GSMUA_Achr8P20260_001 307 -SDTYANEHSACAARVAAGLCSDLARTIVSGSAKNGFALVRPPGHHAGVRQAMGFCLHNNAAVAALAAQSAG-AKKVLIVDWDVHHGN 392 .478************************************************************98777665.5************** PP class-2.txt 177 GtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfD 264 Gtqeif+ +++vly+SlHR+++g+f+p g+gavdevg ++egf+vN++w++g++gd++y++af++vvlpia eF+Pd+ +vsaGfD GSMUA_Achr8P20260_001 393 GTQEIFEGNKSVLYISLHRHENGRFYP--GTGAVDEVGIMDAEGFSVNIPWSCGGVGDNDYIYAFQHVVLPIALEFAPDITIVSAGFD 478 ***************************..*********************************************************** PP class-2.txt 265 aaegdplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322 aa+gdplg ++vt+++ya++t+ l+++++g+++++lEGGynl++i+++++avvk+Llg GSMUA_Achr8P20260_001 479 AARGDPLGCCDVTPAGYAQMTHLLTSISEGKLLVILEGGYNLRSISTSATAVVKVLLG 536 ********************************************************96 PP
HDAC Class-I
class-1.txt 18 qkhpmkpkrlslt.heLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycql 104 + hp +p rl+ + ++L+ + k +++ +++ ++eell++hs +++e +++ + a+ ++ + ++ ++ + c+ GSMUA_Achr8P20260_001 243 HPHPERPDRLRAIaSSLAAAGIFPGKCSLIPAREITQEELLRVHSLDHVEAVQHTSHMLASYFT--SDTYANEHSACAARVAAGLCSD 328 5689999999866155666666778999999999999999999999999999998888877777..4456655555554444445555 PP class-1.txt 105 itGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellk.khkrvlyididlhhGDgveeafyttdrvmtvsfh 191 + + +++++k + a+ G hha ++a Gfc n+ +a l + k+vl +d d+hhG+g +e f+ + v+ +s+h GSMUA_Achr8P20260_001 329 LARTIVSGSAK-----NGFALVRPPG-HHAGVRQAMGFCLHNNAAVAALAAQSaGAKKVLIVDWDVHHGNGTQEIFEGNKSVLYISLH 410 54444444332.....3344444444.99**************99999988875899******************************* PP class-1.txt 192 kygee.ffPgtGdlsdvgaekgkyyavnvPlk.dgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaec 277 +++++ f+PgtG +++vg + ++vn+P + g+ D+ y f++v+ ++ f P++ ++ G D+ gD+lg+ +++ g+a++ GSMUA_Achr8P20260_001 411 RHENGrFYPGTGAVDEVGIMDAEGFSVNIPWScGGVGDNDYIYAFQHVVLPIALEFAPDITIVSAGFDAARGDPLGCCDVTPAGYAQM 498 **98549***********************98368***************************************************** PP class-1.txt 278 vkfvksf.nlpllvlGGGGYtlrnvaRcwtyeta 310 +++ s + +llv+ GGY+lr ++ t GSMUA_Achr8P20260_001 499 THLLTSIsEGKLLVILEGGYNLRSISTSATAVVK 532 ******97889************99977665555 PP
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Protein Sequence (Fasta) | MASETLCASD QRGGNFCRES KGHNEINPGE SQKSFSCSCE CHGKSASQAR NGSVSFGERF 60 HKDHLGDHSG GLLTEKSNQT DVGSERLVGV SLSDVRTVTN ASEKACLHEE HESCDACNSI 120 KLQQYMKKQR NNTLQDLYFQ EEYDDDDDDD SDWEPVSPFV IKKWFCANCT MPNFDDVCHC 180 EVCGEDRECE FFRFDPIDSL VGQEAQMSNE TDAGSSDLSL RTRTAIGFDE KMLLHAEVEM 240 KSHPHPERPD RLRAIASSLA AAGIFPGKCS LIPAREITQE ELLRVHSLDH VEAVQHTSHM 300 LASYFTSDTY ANEHSACAAR VAAGLCSDLA RTIVSGSAKN GFALVRPPGH HAGVRQAMGF 360 CLHNNAAVAA LAAQSAGAKK VLIVDWDVHH GNGTQEIFEG NKSVLYISLH RHENGRFYPG 420 TGAVDEVGIM DAEGFSVNIP WSCGGVGDND YIYAFQHVVL PIALEFAPDI TIVSAGFDAA 480 RGDPLGCCDV TPAGYAQMTH LLTSISEGKL LVILEGGYNL RSISTSATAV VKVLLGDNPY 540 CEMSDIVPSR AGLQAILQVL KVQLKYWPIL KATYLVLQSQ WGLVASDNRD QMKKRRHLVG 600 PVWWKWGSKR FVYELFYGRP HSRHVHVKRM RLG 633Protein Fasta Sequence
>GSMUA_Achr8P20260_001|Class-I|Musa acuminata MASETLCASDQRGGNFCRESKGHNEINPGESQKSFSCSCECHGKSASQARNGSVSFGERFHKDHLGDHSGGLLTEKSNQTDVGSERLVGVSLSDVRTVTNASEKACLHEEHESCDACNSIKLQQYMKKQRNNTLQDLYFQEEYDDDDDDDSDWEPVSPFVIKKWFCANCTMPNFDDVCHCEVCGEDRECEFFRFDPIDSLVGQEAQMSNETDAGSSDLSLRTRTAIGFDEKMLLHAEVEMKSHPHPERPDRLRAIASSLAAAGIFPGKCSLIPAREITQEELLRVHSLDHVEAVQHTSHMLASYFTSDTYANEHSACAARVAAGLCSDLARTIVSGSAKNGFALVRPPGHHAGVRQAMGFCLHNNAAVAALAAQSAGAKKVLIVDWDVHHGNGTQEIFEGNKSVLYISLHRHENGRFYPGTGAVDEVGIMDAEGFSVNIPWSCGGVGDNDYIYAFQHVVLPIALEFAPDITIVSAGFDAARGDPLGCCDVTPAGYAQMTHLLTSISEGKLLVILEGGYNLRSISTSATAVVKVLLGDNPYCEMSDIVPSRAGLQAILQVLKVQLKYWPILKATYLVLQSQWGLVASDNRDQMKKRRHLVGPVWWKWGSKRFVYELFYGRPHSRHVHVKRMRLG
|
Nucleotide Sequence (Fasta) | GTCTGGTCCT CCCGTCCTCT ACCGTCGCCG GCTGCCATCC CGGTCGCTGA TCCGTTGGCC 60 CAAAGAACTT TTCCTTTTTC CGGAGTCGAT CTCGACACCG CAGCTTTCAG GATGCTATGG 120 TAAATGAACA CTCTACTTAC CACTTAAAGA GATAAAATTC TTCCGACATT TTTATGGCTT 180 CTGAGACACT TTGTGCAAGT GATCAAAGGG GTGGAAATTT TTGCAGAGAA AGTAAAGGAC 240 ATAATGAAAT TAATCCAGGA GAATCTCAAA AGAGCTTCTC TTGCTCATGT GAATGCCATG 300 GAAAATCAGC TTCTCAGGCC AGGAATGGCT CTGTGAGTTT TGGTGAAAGA TTTCACAAAG 360 ATCATTTGGG TGATCATAGT GGTGGCTTGT TAACTGAGAA GTCCAACCAA ACAGATGTTG 420 GTTCAGAAAG GTTAGTGGGT GTATCATTAT CAGATGTGAG AACTGTTACC AATGCTTCTG 480 AAAAGGCTTG TCTGCATGAA GAGCATGAAA GCTGTGATGC ATGCAATTCT ATAAAACTGC 540 AACAATATAT GAAGAAGCAA AGGAACAATA CATTACAAGA TCTGTATTTT CAAGAAGAGT 600 ACGATGATGA TGATGATGAT GACAGCGACT GGGAACCAGT CAGTCCCTTT GTCATCAAAA 660 AATGGTTTTG TGCTAATTGT ACAATGCCAA ACTTTGATGA TGTTTGTCAT TGTGAAGTAT 720 GCGGAGAGGA TAGGGAGTGC GAGTTCTTTA GATTTGATCC TATCGATTCT CTTGTTGGGC 780 AGGAAGCTCA GATGTCTAAT GAGACAGATG CAGGAAGCTC AGATTTGTCC TTGAGAACGA 840 GGACAGCTAT TGGTTTTGAT GAGAAAATGT TGCTCCATGC GGAGGTTGAA ATGAAGTCAC 900 ACCCACACCC AGAGAGGCCT GATCGTCTTA GAGCAATTGC ATCTAGCCTT GCTGCTGCAG 960 GGATATTTCC AGGAAAGTGC TCTCTGATAC CGGCTAGAGA AATAACACAA GAAGAGCTTC 1020 TTAGAGTACA CTCTCTGGAT CATGTTGAAG CAGTTCAACA CACAAGCCAT ATGCTTGCAA 1080 GCTACTTCAC GTCCGACACT TATGCCAATG AACATTCAGC GTGTGCTGCA AGGGTTGCAG 1140 CTGGACTCTG TTCAGATCTT GCTCGCACAA TAGTGTCTGG TAGTGCCAAG AATGGTTTTG 1200 CTTTGGTTAG GCCTCCTGGG CATCATGCAG GTGTAAGACA AGCAATGGGC TTTTGCCTCC 1260 ATAACAATGC TGCAGTTGCA GCATTGGCAG CCCAGAGTGC TGGTGCTAAG AAAGTCTTAA 1320 TTGTTGACTG GGATGTCCAC CATGGCAATG GCACACAAGA GATATTTGAG GGGAACAAAT 1380 CGGTTTTATA TATATCTTTG CATAGGCATG AAAATGGAAG ATTCTATCCT GGAACTGGAG 1440 CAGTTGACGA GGTTGGAATT ATGGATGCTG AAGGATTCTC AGTTAACATT CCTTGGAGCT 1500 GTGGGGGTGT GGGAGATAAT GATTACATTT ATGCCTTTCA ACATGTTGTA CTTCCTATAG 1560 CTTTAGAATT TGCCCCTGAT ATTACAATTG TATCAGCAGG ATTTGATGCA GCAAGGGGTG 1620 ATCCCCTTGG TTGTTGTGAT GTAACACCTG CTGGATATGC TCAGATGACA CACTTGCTTA 1680 CTTCTATCTC TGAAGGAAAA TTGCTGGTCA TACTTGAAGG AGGCTACAAC CTCCGTTCAA 1740 TATCCACTTC AGCTACAGCA GTGGTTAAGG TGTTACTTGG TGACAATCCT TATTGTGAGA 1800 TGAGTGACAT CGTGCCTTCA AGAGCAGGCC TGCAAGCTAT TCTTCAAGTC TTGAAAGTTC 1860 AGTTGAAGTA TTGGCCAATT TTAAAAGCAA CCTATCTGGT GCTACAGTCC CAATGGGGCC 1920 TTGTTGCTTC TGATAACAGA GACCAGATGA AGAAGAGGAG GCATCTGGTT GGACCAGTGT 1980 GGTGGAAATG GGGAAGTAAG AGGTTCGTGT ATGAACTATT TTATGGCAGG CCACATTCAA 2040 GACATGTACA TGTCAAAAGA ATGAGACTTG GTTGATATTG CAAGGAAGGC GAAGCATGCA 2100 GATGTAAGGA TTTTGCTGGT GGATGATGCT GCCGGAAACA ACCAAGATTA GCAGAAGATT 2160 GTTTGATGGA CAAGTTCTCA GCACATTTTA TCTGCCAAAG TCTAGCTTAG GATTTTGCTT 2220 GTTGCTGTAG GATGTCCTTT TTTCGAAATG TTTAACTAAC AGAAACCAAA GCTTTATGGG 2280 AGCAAACCAT TGTAATTTAT CGTTGCTGTG ATTTCAGCGT GGTTGTGTTT AGTTTTCAAG 2340 AAGAAGCCCG TAAGAGCT
2359Nucleotide Fasta Sequence
>GSMUA_Achr8P20260_001|Class-I|Musa acuminata GTCTGGTCCTCCCGTCCTCTACCGTCGCCGGCTGCCATCCCGGTCGCTGATCCGTTGGCCCAAAGAACTTTTCCTTTTTCCGGAGTCGATCTCGACACCGCAGCTTTCAGGATGCTATGGTAAATGAACACTCTACTTACCACTTAAAGAGATAAAATTCTTCCGACATTTTTATGGCTTCTGAGACACTTTGTGCAAGTGATCAAAGGGGTGGAAATTTTTGCAGAGAAAGTAAAGGACATAATGAAATTAATCCAGGAGAATCTCAAAAGAGCTTCTCTTGCTCATGTGAATGCCATGGAAAATCAGCTTCTCAGGCCAGGAATGGCTCTGTGAGTTTTGGTGAAAGATTTCACAAAGATCATTTGGGTGATCATAGTGGTGGCTTGTTAACTGAGAAGTCCAACCAAACAGATGTTGGTTCAGAAAGGTTAGTGGGTGTATCATTATCAGATGTGAGAACTGTTACCAATGCTTCTGAAAAGGCTTGTCTGCATGAAGAGCATGAAAGCTGTGATGCATGCAATTCTATAAAACTGCAACAATATATGAAGAAGCAAAGGAACAATACATTACAAGATCTGTATTTTCAAGAAGAGTACGATGATGATGATGATGATGACAGCGACTGGGAACCAGTCAGTCCCTTTGTCATCAAAAAATGGTTTTGTGCTAATTGTACAATGCCAAACTTTGATGATGTTTGTCATTGTGAAGTATGCGGAGAGGATAGGGAGTGCGAGTTCTTTAGATTTGATCCTATCGATTCTCTTGTTGGGCAGGAAGCTCAGATGTCTAATGAGACAGATGCAGGAAGCTCAGATTTGTCCTTGAGAACGAGGACAGCTATTGGTTTTGATGAGAAAATGTTGCTCCATGCGGAGGTTGAAATGAAGTCACACCCACACCCAGAGAGGCCTGATCGTCTTAGAGCAATTGCATCTAGCCTTGCTGCTGCAGGGATATTTCCAGGAAAGTGCTCTCTGATACCGGCTAGAGAAATAACACAAGAAGAGCTTCTTAGAGTACACTCTCTGGATCATGTTGAAGCAGTTCAACACACAAGCCATATGCTTGCAAGCTACTTCACGTCCGACACTTATGCCAATGAACATTCAGCGTGTGCTGCAAGGGTTGCAGCTGGACTCTGTTCAGATCTTGCTCGCACAATAGTGTCTGGTAGTGCCAAGAATGGTTTTGCTTTGGTTAGGCCTCCTGGGCATCATGCAGGTGTAAGACAAGCAATGGGCTTTTGCCTCCATAACAATGCTGCAGTTGCAGCATTGGCAGCCCAGAGTGCTGGTGCTAAGAAAGTCTTAATTGTTGACTGGGATGTCCACCATGGCAATGGCACACAAGAGATATTTGAGGGGAACAAATCGGTTTTATATATATCTTTGCATAGGCATGAAAATGGAAGATTCTATCCTGGAACTGGAGCAGTTGACGAGGTTGGAATTATGGATGCTGAAGGATTCTCAGTTAACATTCCTTGGAGCTGTGGGGGTGTGGGAGATAATGATTACATTTATGCCTTTCAACATGTTGTACTTCCTATAGCTTTAGAATTTGCCCCTGATATTACAATTGTATCAGCAGGATTTGATGCAGCAAGGGGTGATCCCCTTGGTTGTTGTGATGTAACACCTGCTGGATATGCTCAGATGACACACTTGCTTACTTCTATCTCTGAAGGAAAATTGCTGGTCATACTTGAAGGAGGCTACAACCTCCGTTCAATATCCACTTCAGCTACAGCAGTGGTTAAGGTGTTACTTGGTGACAATCCTTATTGTGAGATGAGTGACATCGTGCCTTCAAGAGCAGGCCTGCAAGCTATTCTTCAAGTCTTGAAAGTTCAGTTGAAGTATTGGCCAATTTTAAAAGCAACCTATCTGGTGCTACAGTCCCAATGGGGCCTTGTTGCTTCTGATAACAGAGACCAGATGAAGAAGAGGAGGCATCTGGTTGGACCAGTGTGGTGGAAATGGGGAAGTAAGAGGTTCGTGTATGAACTATTTTATGGCAGGCCACATTCAAGACATGTACATGTCAAAAGAATGAGACTTGGTTGATATTGCAAGGAAGGCGAAGCATGCAGATGTAAGGATTTTGCTGGTGGATGATGCTGCCGGAAACAACCAAGATTAGCAGAAGATTGTTTGATGGACAAGTTCTCAGCACATTTTATCTGCCAAAGTCTAGCTTAGGATTTTGCTTGTTGCTGTAGGATGTCCTTTTTTCGAAATGTTTAACTAACAGAAACCAAAGCTTTATGGGAGCAAACCATTGTAATTTATCGTTGCTGTGATTTCAGCGTGGTTGTGTTTAGTTTTCAAGAAGAAGCCCGTAAGAGCT
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |