WERAM Information

Tag Content
WERAM ID WERAM-Gaa-0053
Ensembl Protein ID ENSGACP00000006953.1
Gene Name hdac5
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSGACG00000005250.1 ENSGACT00000006971.1 ENSGACP00000006953.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 3.70e-144 480.3 78 999
HDAC Class-I 5.10e-30 105.5 806 968
Organism Gasterosteus aculeatus
Domain Profile
  HDAC Class-II
           class-2.txt  31 qailsrlqeagllekleelkarkatkeelqlvHseehvelletae 75 
                           q+ l  l++++ l+k + +++ ++++e l+  H+ ++ e+l++++
  ENSGACP00000006953.1  78 QQELVLLKQQQELQKQLLFAEFQKKHEVLTRQHEVQLQEHLKRNK 122
                           233333333333334444444444444555555555555555443 PP
           class-2.txt   2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles...... 84 
                           +glvyd+ mlkhq++++n + hpE+++R+q+i+srlqe+gll+++e++++rka+++e+q+vHse h+ l++t+ +l++++l++      
  ENSGACP00000006953.1 658 TGLVYDSLMLKHQCVCGNAHIHPEHAGRVQSIWSRLQETGLLGRCERIRGRKASLDEIQSVHSEFHTLLYGTS-PLNRHKLDHkkllgp 745
                           79**********************************************************************9.********99***** PP
           class-2.txt  85 .............ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqkl 160
                                        ++vdsd++++e++s++a+r+avG+v+el+++v++gelkngfavvRPPGHHaeestamGFC+fn+va++akllqqkl
  ENSGACP00000006953.1 746 isqkmyavlpcggIGVDSDTVWNEMHSSAAVRMAVGSVIELAFRVAAGELKNGFAVVRPPGHHAEESTAMGFCFFNSVAITAKLLQQKL 834
                           ***************************************************************************************** PP
           class-2.txt 161 kvkkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafrevvl 246
                            v kilivDwD+HhGnGtq++fy+d +vly+SlHRyd+g+ffp  gsga++evg+g+g+gfnvNvaw+gg+   mgd eyl+afr vv+
  ENSGACP00000006953.1 835 GVGKILIVDWDIHHGNGTQQAFYSDASVLYISLHRYDDGNFFP--GSGAPEEVGSGAGVGFNVNVAWTGGVeppMGDVEYLTAFRSVVM 921
                           *******************************************..******************************************** PP
           class-2.txt 247 piakeFkPdlvlvsaGfDaaeg..dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322
                           pia++F+Pd+vlvsaGfDa+eg  +plgg++v+akc+++lt+ l++laggrv+++lEGG++l+ai++a+ea+v aLlg
  ENSGACP00000006953.1 922 PIAQQFSPDVVLVSAGFDAVEGhqSPLGGYNVSAKCFGQLTQLLMGLAGGRVIMALEGGHDLTAICDASEACVAALLG 999
                           **********************999***************************************************96 PP
  HDAC Class-I
           class-1.txt 131 lhhakkseasGfcyvnDivlailellkkh..krvlyididlhhGDgveeafyttdrvmtvsfhkyge.effPgtGdlsdvgaekgkyya 216
                            hha  s a Gfc+ n + ++   l++k+   ++l +d d+hhG+g ++afy    v+ +s+h+y++ +ffPg+G  ++vg + g  + 
  ENSGACP00000006953.1 806 GHHAEESTAMGFCFFNSVAITAKLLQQKLgvGKILIVDWDIHHGNGTQQAFYSDASVLYISLHRYDDgNFFPGSGAPEEVGSGAGVGFN 894
                           4*******************998888864227*********************************9746******************** PP
           class-1.txt 217 vnvPlkdgid....DesyekifksviskvieafePeavvlqcGaDslag..Drlgefnlsikghaecvkfvksf 284
                           vnv  + g++    D +y + f+sv+ ++ + f+P++v++  G D++ g   +lg +n+s k +++  +++   
  ENSGACP00000006953.1 895 VNVAWTGGVEppmgDVEYLTAFRSVVMPIAQQFSPDVVLVSAGFDAVEGhqSPLGGYNVSAKCFGQLTQLLMGL 968
                           ****99997555559********************************872257************998887665 PP
Protein Sequence
(Fasta)		TDSCSDGLRN PGFSSIARSL FVLPAVVEVK SSLPSGACPG EGPGGGGPVD LRTEARVGSL 60
PVGAAAAVDT AMREQQLQQE LVLLKQQQEL QKQLLFAEFQ KKHEVLTRQH EVQLQEHLKR 120
NKEKGKESRS RPHHRPRRRP APQIPPHLTL LLCFSFFWKG AIASTEVKLK LQEFLLNKKE 180
PGIGGLNHSF SPKCWYRGAQ HISLEQGSPP QSNTPGTPPS YKLPPLLGNY DGKDDFPLRK 240
TVSEPNLKVR SRLKQKVAER RSSPLLRRKD GTVISTFKKR AIEISAVSPP VSSLCNSAPG 300
SGPSSPNSSN SAIANGNTGS VPNIQTELRS LHQTLGADGT LSPLNLYTSP SLPNISLGLP 360
ANTHITTAQA LSNQQEAERL AIQSLRGGGA LTGKFLSTSC LPAAGVGHEV EPPSSHSAHS 420
SLLQHVLLLE QARQQTTMLA AMTLRPHPVP MYSQSPLVTA ERGASSGMRA VNKLPRHRPL 480
ARTQSAPLPQ SPQALQQLVV QQQHQHFLEK HYKVKKKKKE ILSKGVDLPR PPPTHPEETE 540
EELTETNDMQ EDDEGPSLHR FGIFDSISTN GESTESELDE EEEEDDIIQL RECDEESPPT 600
HGESPSSQQG AQQHSLYIEA TALQQLGVFQ SLLPHRPLGR AQSSPAAPVN PIKHLFTTGL 660
VYDSLMLKHQ CVCGNAHIHP EHAGRVQSIW SRLQETGLLG RCERIRGRKA SLDEIQSVHS 720
EFHTLLYGTS PLNRHKLDHK KLLGPISQKM YAVLPCGGIG VDSDTVWNEM HSSAAVRMAV 780
GSVIELAFRV AAGELKNGFA VVRPPGHHAE ESTAMGFCFF NSVAITAKLL QQKLGVGKIL 840
IVDWDIHHGN GTQQAFYSDA SVLYISLHRY DDGNFFPGSG APEEVGSGAG VGFNVNVAWT 900
GGVEPPMGDV EYLTAFRSVV MPIAQQFSPD VVLVSAGFDA VEGHQSPLGG YNVSAKCFGQ 960
LTQLLMGLAG GRVIMALEGG HDLTAICDAS EACVAALLGE PCDSGFQWPQ EKPCPKAWAS 1020
LERVIEIQDK HWSCLQSLSQ TSGHSLSDDP VGARGQSEKD EAETVSAMAS LSVDVERPGS 1080
DPDNAETSRC TEEPMEEEPV L 1101
Nucleotide Sequence
(Fasta)		ACTGATAGCT GCAGCGATGG CCTCCGTAAT CCAGGATTCT CATCAATTGC TCGCTCTCTG 60
TTTGTCCTTC CTGCAGTGGT GGAGGTGAAG AGCAGCCTCC CATCGGGTGC GTGTCCAGGA 120
GAAGGCCCGG GTGGGGGAGG CCCAGTGGAC CTGCGGACGG AGGCCAGGGT GGGGTCCCTC 180
CCTGTGGGCG CGGCAGCTGC GGTGGACACA GCCATGAGGG AGCAGCAGCT CCAGCAGGAA 240
CTTGTGCTCC TCAAGCAGCA GCAGGAGCTC CAGAAGCAGC TGCTGTTCGC CGAGTTCCAG 300
AAGAAACATG AAGTGCTGAC GAGGCAACAC GAGGTGCAGC TGCAGGAGCA CCTGAAGAGG 360
AACAAGGAGA AGGGCAAAGA GAGTAGGTCC CGCCCCCACC ACCGTCCACG GCGCCGCCCC 420
GCCCCTCAAA TCCCCCCCCA CCTGACTCTC TTGTTGTGCT TCTCCTTTTT CTGGAAAGGT 480
GCCATCGCCA GCACAGAGGT GAAGCTTAAG CTGCAGGAGT TTCTTCTCAA TAAGAAAGAG 540
CCCGGCATCG GCGGACTGAA CCATTCCTTC TCCCCAAAGT GCTGGTACAG GGGAGCCCAG 600
CACATCTCCC TGGAGCAGGG CTCTCCTCCG CAGAGCAACA CCCCAGGAAC TCCTCCCTCC 660
TACAAACTGC CCCCGCTGCT GGGGAACTAC GACGGCAAAG ATGACTTCCC GCTCCGCAAG 720
ACAGTGTCGG AGCCCAACCT GAAGGTGCGC TCGCGGTTGA AGCAGAAGGT GGCAGAGAGG 780
CGGAGCTCTC CACTCCTCCG CAGGAAGGAC GGGACCGTGA TCAGCACCTT TAAGAAGAGA 840
GCCATAGAGA TATCAGCCGT CTCTCCACCA GTCTCCTCTC TCTGTAATAG CGCTCCAGGT 900
TCTGGTCCCA GCAGCCCCAA CAGTTCCAAC TCGGCTATCG CCAATGGCAA CACGGGGTCG 960
GTCCCCAACA TACAGACCGA GCTGAGATCC CTCCACCAGA CGCTGGGGGC TGATGGGACA 1020
TTAAGTCCTC TCAATCTCTA CACCTCGCCC TCCTTGCCCA ATATTTCCTT GGGGCTCCCA 1080
GCCAACACGC ACATCACGAC CGCCCAGGCG CTGTCCAACC AGCAAGAGGC TGAGCGTCTA 1140
GCCATCCAAT CGCTGCGGGG GGGCGGAGCT CTAACAGGGA AGTTTCTCTC CACGTCGTGC 1200
CTACCTGCAG CTGGGGTGGG GCACGAGGTG GAGCCCCCCA GCTCTCATTC TGCCCATTCC 1260
TCATTACTGC AACATGTACT ACTGCTGGAG CAGGCCAGAC AACAGACTAC TATGCTAGCC 1320
GCTATGACGC TCCGCCCACA CCCAGTCCCC ATGTACAGCC AGTCGCCGCT GGTTACCGCA 1380
GAGAGAGGCG CGTCCAGCGG TATGCGGGCG GTCAACAAGT TGCCTCGCCA CCGGCCGCTG 1440
GCTCGTACCC AGAGTGCACC TCTGCCCCAG TCGCCCCAGG CCCTGCAGCA GCTGGTGGTC 1500
CAGCAGCAGC ACCAGCACTT CCTGGAGAAA CACTACAAGG TAAAAAAAAA AAAAAAAGAA 1560
ATTCTATCCA AAGGGGTGGA CCTTCCTAGG CCGCCGCCGA CACACCCAGA GGAGACCGAG 1620
GAGGAGCTAA CGGAGACTAA CGACATGCAG GAGGATGACG AAGGGCCGAG CCTACACAGG 1680
TTTGGCATTT TTGACAGCAT CAGCACCAAT GGGGAGAGCA CAGAGAGTGA GCTGGATGAA 1740
GAGGAGGAGG AAGACGACAT CATCCAACTG AGGGAGTGCG ACGAAGAGTC TCCACCCACA 1800
CATGGTGAGT CACCCAGTTC GCAGCAGGGA GCACAGCAAC ACTCCCTATA TATAGAAGCT 1860
ACTGCCTTGC AGCAGCTGGG CGTGTTCCAG TCCCTGTTGC CTCACAGACC TCTGGGGAGA 1920
GCGCAGTCGT CCCCCGCCGC CCCGGTCAAC CCCATCAAGC ACCTCTTCAC CACCGGACTT 1980
GTGTATGACA GTCTGATGCT GAAGCATCAG TGTGTGTGCG GCAACGCTCA CATCCACCCA 2040
GAGCATGCTG GGAGAGTGCA AAGCATCTGG TCCCGACTGC AGGAGACGGG TCTGTTGGGG 2100
CGCTGCGAGA GGATTCGGGG GCGAAAAGCT TCTCTGGATG AGATCCAGTC GGTCCATTCA 2160
GAGTTCCACA CTCTGCTGTA TGGAACCAGT CCGCTGAATC GACACAAACT GGACCACAAG 2220
AAGCTGCTGG GTCCAATCAG CCAGAAGATG TACGCCGTTC TCCCCTGTGG AGGAATCGGG 2280
GTGGACAGCG ACACCGTGTG GAACGAGATG CACTCGTCGG CGGCGGTGCG CATGGCGGTC 2340
GGCTCGGTGA TCGAGCTGGC CTTCAGGGTG GCGGCGGGGG AGCTGAAGAA CGGCTTCGCT 2400
GTGGTGCGTC CGCCGGGCCA CCACGCCGAG GAGTCCACCG CCATGGGCTT TTGTTTCTTT 2460
AATTCAGTAG CCATCACTGC CAAGCTGCTG CAGCAGAAGC TGGGTGTGGG CAAGATCCTC 2520
ATCGTGGACT GGGACATTCA CCATGGCAAC GGCACCCAGC AGGCCTTCTA CAGTGACGCC 2580
AGCGTTCTCT ACATCTCCCT CCATCGCTAC GACGACGGAA ACTTCTTTCC TGGCAGCGGA 2640
GCGCCAGAGG AGGTGGGATC GGGGGCTGGG GTTGGTTTCA ATGTGAACGT AGCGTGGACC 2700
GGGGGAGTGG AGCCGCCTAT GGGGGATGTG GAGTACCTCA CTGCCTTCAG AAGCGTAGTG 2760
ATGCCCATTG CCCAGCAGTT CAGTCCAGAT GTGGTCCTGG TGTCCGCGGG CTTCGACGCC 2820
GTGGAGGGTC ATCAGTCTCC ATTGGGAGGC TACAACGTCT CCGCCAAGTG TTTCGGGCAG 2880
CTAACGCAGC TTCTGATGGG TCTGGCGGGC GGCCGCGTCA TCATGGCGCT GGAGGGAGGT 2940
CACGACCTCA CGGCCATCTG CGACGCATCG GAGGCCTGCG TCGCGGCGCT GCTGGGAGAG 3000
CCGTGTGACT CAGGGTTTCA GTGGCCTCAG GAGAAGCCGT GTCCAAAAGC GTGGGCCTCA 3060
CTGGAGAGAG TCATAGAGAT CCAGGATAAA CACTGGTCGT GTCTCCAGAG TTTGTCCCAG 3120
ACGAGTGGCC ACTCGCTATC TGATGACCCC GTGGGGGCCC GGGGCCAATC GGAAAAGGAC 3180
GAGGCCGAGA CGGTCAGTGC CATGGCCTCA CTCAGCGTCG ACGTTGAGCG GCCGGGCTCT 3240
GATCCAGACA ACGCGGAAAC CAGCAGGTGC ACAGAGGAGC CAATGGAAGA AGAGCCTGTA 3300
TTGTAA 3307
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orn-0072 ENSONIP00000007998.1 Oreochromis niloticus 82 0.0 1448
WERAM-Xim-0214 ENSXMAP00000017502.1 Xiphophorus maculatus 82 0.0 1393
WERAM-Tar-0138 ENSTRUP00000030067.1 Takifugu rubripes 80 0.0 1372
WERAM-Ten-0172 ENSTNIP00000017010.1 Tetraodon nigroviridis 81 0.0 1355
WERAM-Pof-0205 ENSPFOP00000017061.2 Poecilia formosa 80 0.0 1354
WERAM-Dar-0170 ENSDARP00000100072.2 Danio rerio 70 0.0 1197
WERAM-Orla-0184 ENSORLP00000021264.2 Oryzias latipes 72 0.0 1174
WERAM-Leo-0130 ENSLOCP00000016135.1 Lepisosteus oculatus 69 0.0 1105
WERAM-Ict-0187 ENSSTOP00000016795.1 Ictidomys tridecemlineatus 64 0.0 1060
WERAM-Ova-0067 ENSOARP00000007394.1 Ovis aries 66 0.0 1054
WERAM-Mum-0019 ENSMUSP00000102770.2 Mus musculus 68 0.0 1053
WERAM-Dan-0156 ENSDNOP00000017844.1 Dasypus novemcinctus 68 0.0 1045
WERAM-Bot-0149 ENSBTAP00000053450.2 Bos taurus 64 0.0 1040
WERAM-Ran-0140 ENSRNOP00000052059.4 Rattus norvegicus 68 0.0 1039
WERAM-Mam-0051 ENSMMUP00000008945.2 Macaca mulatta 68 0.0 1038
WERAM-Chs-0039 ENSCSAP00000014557.1 Chlorocebus sabaeus 68 0.0 1037
WERAM-Fec-0025 ENSFCAP00000002029.3 Felis catus 68 0.0 1037
WERAM-Poa-0072 ENSPPYP00000009379.1 Pongo abelii 65 0.0 1036
WERAM-Orc-0081 ENSOCUP00000007421.3 Oryctolagus cuniculus 68 0.0 1036
WERAM-Hos-0075 ENSP00000468004.1 Homo sapiens 67 0.0 1035
WERAM-Eqc-0174 ENSECAP00000019543.1 Equus caballus 68 0.0 1033
WERAM-Cap-0214 ENSCPOP00000014276.1 Cavia porcellus 63 0.0 1013
WERAM-Nol-0057 ENSNLEP00000006711.1 Nomascus leucogenys 66 0.0 996
WERAM-Prc-0092 ENSPCAP00000008303.1 Procavia capensis 67 0.0 984
WERAM-Paa-0157 ENSPANP00000020771.1 Papio anubis 66 0.0 834
WERAM-Ptv-0156 ENSPVAP00000012934.1 Pteropus vampyrus 73 0.0 751
WERAM-Caf-0149 ENSCAFP00000021172.4 Canis familiaris 73 0.0 749
WERAM-Myl-0072 ENSMLUP00000005848.2 Myotis lucifugus 73 0.0 748
WERAM-Sus-0129 ENSSSCP00000018401.2 Sus scrofa 68 0.0 746
WERAM-Aim-0213 ENSAMEP00000019373.1 Ailuropoda melanoleuca 72 0.0 739
WERAM-Anc-0037 ENSACAP00000004435.3 Anolis carolinensis 71 0.0 737
WERAM-Caj-0108 ENSCJAP00000018977.1 Callithrix jacchus 72 0.0 734
WERAM-Otg-0108 ENSOGAP00000009396.2 Otolemur garnettii 74 0.0 733
WERAM-Mod-0095 ENSMODP00000032765.2 Monodelphis domestica 71 0.0 733
WERAM-Dio-0163 ENSDORP00000015416.1 Dipodomys ordii 72 0.0 733
WERAM-Ocp-0087 ENSOPRP00000007869.2 Ochotona princeps 73 0.0 729
WERAM-Tut-0123 ENSTTRP00000009926.1 Tursiops truncatus 73 0.0 728
WERAM-Pes-0126 ENSPSIP00000015149.1 Pelodiscus sinensis 72 0.0 727
WERAM-Mup-0103 ENSMPUP00000009452.1 Mustela putorius furo 75 0.0 715
WERAM-Loa-0216 ENSLAFP00000022496.1 Loxodonta africana 70 0.0 711
WERAM-Mim-0022 ENSMICP00000002393.1 Microcebus murinus 72 0.0 702
WERAM-Xet-0027 ENSXETP00000007313.3 Xenopus tropicalis 69 0.0 692
WERAM-Gaga-0049 ENSGALP00000033098.3 Gallus gallus 65 0.0 690
WERAM-Anp-0035 ENSAPLP00000004005.1 Anas platyrhynchos 65 0.0 688
WERAM-Meg-0023 ENSMGAP00000001752.2 Meleagris gallopavo 65 0.0 686
WERAM-Lac-0155 ENSLACP00000018356.1 Latimeria chalumnae 69 0.0 679
WERAM-Tag-0050 ENSTGUP00000003338.1 Taeniopygia guttata 66 0.0 678
WERAM-Fia-0056 ENSFALP00000004005.1 Ficedula albicollis 66 0.0 676
WERAM-Pat-0104 ENSPTRP00000022412.3 Pan troglodytes 65 0.0 672
WERAM-Pem-0041 ENSPMAP00000005402.1 Petromyzon marinus 66 0.0 662
WERAM-Gog-0157 ENSGGOP00000013985.2 Gorilla gorilla 64 0.0 659
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 64 0.0 657
WERAM-Asm-0202 ENSAMXP00000018862.1 Astyanax mexicanus 66 0.0 640
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 61 0.0 637
WERAM-Mae-0145 ENSMEUP00000015025.1 Macropus eugenii 64 0.0 636
WERAM-Sah-0025 ENSSHAP00000002837.1 Sarcophilus harrisii 65 2e-175 614
WERAM-Ere-0042 ENSEEUP00000003697.1 Erinaceus europaeus 64 4e-169 593
WERAM-Soa-0055 ENSSARP00000005400.1 Sorex araneus 61 2e-166 584
WERAM-Gam-0063 ENSGMOP00000006368.1 Gadus morhua 62 4e-164 576
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 66 3e-156 550
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 55 6e-148 522
WERAM-Ect-0082 ENSETEP00000009275.1 Echinops telfairi 57 6e-144 509
WERAM-Chh-0086 ENSCHOP00000009630.1 Choloepus hoffmanni 62 1e-127 455
WERAM-Tub-0129 ENSTBEP00000014362.1 Tupaia belangeri 49 3e-123 441
WERAM-Cii-0046 ENSCINP00000016829.3 Ciona intestinalis 49 3e-118 424
WERAM-Cae-0008 C10E2.3a Caenorhabditis elegans 50 1e-110 399
WERAM-Cis-0060 ENSCSAVP00000013851.1 Ciona savignyi 51 3e-81 301
WERAM-Lep-0079 LPERR07G18450.1 Leersia perrieri 39 7e-79 293
WERAM-Sem-0022 EFJ08599 Selaginella moellendorffii 39 1e-78 292
WERAM-Ori-0088 BGIOSGA026083-PA Oryza indica 41 6e-77 286
WERAM-Orgl-0076 OGLUM07G21150.1 Oryza glumaepatula 41 6e-77 286
WERAM-Ors-0072 OS07T0602200-01 Oryza sativa 41 6e-77 286
Created Date 25-Jun-2016