Tag |
Content |
WERAM ID |
WERAM-Gam-0063 |
Ensembl Protein ID |
ENSGMOP00000006368.1 |
Gene Name |
hdac4 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
2.00e-135 |
451.2 |
61 |
944 |
HDAC |
Class-I |
3.00e-28 |
99.4 |
90 |
906 |
|
Organism |
Gadus morhua |
Domain Profile |
HDAC Class-II
class-2.txt 27 peRiqailsrlqeaglle..kleelka.rkatkeelqlvHseehvelletae.klekeelesl 85 +R i + ++++ l+ + ++l++ k +++ l+l H++e++e+ ++ e + ++e+e++ ENSGMOP00000006368.1 61 VQRQLLIAEFQRQHEQLSrqHEVQLQEhIKHQQDLLALKHQQELLEHQRKMErHRLEQEVEKQ 123 344333333333332222012333444134444455666777777776666555555555542 PP class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles...... 84 +glvyd+ m khq++++n+++hpE+++Riq+i+srlqe+gl+ ++e ++ ENSGMOP00000006368.1 610 TGLVYDSLMQKHQCICGNSTSHPEHAGRIQSIWSRLQERGLRAHCEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVnpmfvr 698 79*********************************************999888887777776666555555554333333333579999 PP class-2.txt 85 .....ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkiliv 168 ++vdsd+i+++++s++aarlavG+v+elv+kv++ge+kngfavvRPPGHHaeest+mGFC+fn+va+aakllqq+l+v+kiliv ENSGMOP00000006368.1 699 lpcggIGVDSDTIWNDVHSSSAARLAVGSVVELVFKVASGEIKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLSVSKILIV 787 9**************************************************************************************** PP class-2.txt 169 DwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafrevvlpiakeFkP 254 DwDvHhGnGtq++fy+dp+vlylSlHRyd+g+ffp gsga+devg+g+g+gfnvN+a++ggl mgda+ylaafr+vv+pia+eF+P ENSGMOP00000006368.1 788 DWDVHHGNGTQQAFYSDPNVLYLSLHRYDDGNFFP--GSGAPDEVGTGAGVGFNVNMAFTGGLeppMGDADYLAAFRTVVMPIANEFAP 874 ***********************************..**************************************************** PP class-2.txt 255 dlvlvsaGfDaaeg..dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322 d+vlvs+GfDa+eg plgg+++takc+++lt+ql++laggrvvl+lEGG++l+ai++a+ea+v+aLlg ENSGMOP00000006368.1 875 DVVLVSSGFDAVEGhaPPLGGYRLTAKCFGYLTRQLMGLAGGRVVLALEGGHDLTAICDASEACVSALLG 944 **************999***************************************************96 PP
HDAC Class-I
class-1.txt 28 sltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaee 78 + ++L l+ h++e +e+ +k+e + e+ ENSGMOP00000006368.1 90 KHQQDL----------------------LALKHQQELLEHQRKMERHRLEQ 118 222222......................22223333333333333333221 PP class-1.txt 132 hhakkseasGfcyvnDivlailellk..khkrvlyididlhhGDgveeafyttdrvmtvsfhkyge.effPgtGdlsdvgaekgkyyav 217 hha s Gfcy n + +a l++ + +++l +d d+hhG+g ++afy v+ +s+h+y++ +ffPg+G ++vg++ g + v ENSGMOP00000006368.1 752 HHAEESTPMGFCYFNSVAIAAKLLQQrlSVSKILIVDWDVHHGNGTQQAFYSDPNVLYLSLHRYDDgNFFPGSGAPDEVGTGAGVGFNV 840 *******************987777645789*********************************9746********************* PP class-1.txt 218 nvPlkdgid....DesyekifksviskvieafePeavvlqcGaDslagD..rlgefnlsikghaec 277 n+ ++ g++ D y + f++v+ ++ + f P++v++ G D++ g +lg + l+ k ++ ENSGMOP00000006368.1 841 NMAFTGGLEppmgDADYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHapPLGGYRLTAKCFGYL 906 **98888644444*********************************976347*******9988765 PP
|
Protein Sequence (Fasta) | LVDVSTAAVL PMQVPPTTPN ILPMDLRIXX XXXXXXXXXX XXXXXQQLQE ELLSLKHKQQ 60 VQRQLLIAEF QRQHEQLSRQ HEVQLQEHIK HQQDLLALKH QQELLEHQRK MERHRLEQEV 120 EKQQREHKLQ QLKNKERGQE SAVASTEVKM RLQEFVLNKK KALAHRSLNH CLPSDPRYWY 180 GKTQHSSLDQ SSPPQTALSA YNHSMLGMYD SRDDFPLRKT ASEPNLKLRS RLKQKVTERR 240 SSPLLRRKDG AITTAKKRSL DMAESACNSA PGSGPSSPNN SSSNIPHENG LPISSSPCEV 300 SLLQRLAARD GSVSQLSLYT SPSLPNITLG LPATGPASSL LSVRQDGESR LALQGLQHGI 360 PLSPPFRPGT HLPAYLEGAG VPGGSHNPLL QHMVLLEQAH NPLGLPLSSP SVSKLARGHR 420 PLGRTQSAPL PQQQAGPAQA LQQLVVQQQH QQFLEKHKQQ FQQQXXXXXX XSSSSSSSRQ 480 HQSHPEETEE ELREHQGLSS VSPPAPPSTA APPPWPQRGL VIKQEPLDPQ EEQEERERQT 540 EELLFRQQQA LLLEQQRIHQ LRNYQASMEA AGLSISFAGH RPLSRAQSSP ASASFPLVVQ 600 DPPSKPRFTT GLVYDSLMQK HQCICGNSTS HPEHAGRIQS IWSRLQERGL RAHCEXXXXX 660 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX AVNPMFVRLP CGGIGVDSDT IWNDVHSSSA 720 ARLAVGSVVE LVFKVASGEI KNGFAVVRPP GHHAEESTPM GFCYFNSVAI AAKLLQQRLS 780 VSKILIVDWD VHHGNGTQQA FYSDPNVLYL SLHRYDDGNF FPGSGAPDEV GTGAGVGFNV 840 NMAFTGGLEP PMGDADYLAA FRTVVMPIAN EFAPDVVLVS SGFDAVEGHA PPLGGYRLTA 900 KCFGYLTRQL MGLAGGRVVL ALEGGHDLTA ICDASEACVS ALLGNELDPL PDEVVQQRPN 960 ANAVQSMENV LEIQGKYWRS LQRSASKLGY SLSEVLRSES EETETVTAMA SLSVANKHIS 1020 KRTEEEPMEE E 1031Protein Fasta Sequence
>ENSGMOP00000006368.1|Class-I|Gadus morhua LVDVSTAAVLPMQVPPTTPNILPMDLRIXXXXXXXXXXXXXXXXXQQLQEELLSLKHKQQVQRQLLIAEFQRQHEQLSRQHEVQLQEHIKHQQDLLALKHQQELLEHQRKMERHRLEQEVEKQQREHKLQQLKNKERGQESAVASTEVKMRLQEFVLNKKKALAHRSLNHCLPSDPRYWYGKTQHSSLDQSSPPQTALSAYNHSMLGMYDSRDDFPLRKTASEPNLKLRSRLKQKVTERRSSPLLRRKDGAITTAKKRSLDMAESACNSAPGSGPSSPNNSSSNIPHENGLPISSSPCEVSLLQRLAARDGSVSQLSLYTSPSLPNITLGLPATGPASSLLSVRQDGESRLALQGLQHGIPLSPPFRPGTHLPAYLEGAGVPGGSHNPLLQHMVLLEQAHNPLGLPLSSPSVSKLARGHRPLGRTQSAPLPQQQAGPAQALQQLVVQQQHQQFLEKHKQQFQQQXXXXXXXSSSSSSSRQHQSHPEETEEELREHQGLSSVSPPAPPSTAAPPPWPQRGLVIKQEPLDPQEEQEERERQTEELLFRQQQALLLEQQRIHQLRNYQASMEAAGLSISFAGHRPLSRAQSSPASASFPLVVQDPPSKPRFTTGLVYDSLMQKHQCICGNSTSHPEHAGRIQSIWSRLQERGLRAHCEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVNPMFVRLPCGGIGVDSDTIWNDVHSSSAARLAVGSVVELVFKVASGEIKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLSVSKILIVDWDVHHGNGTQQAFYSDPNVLYLSLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNMAFTGGLEPPMGDADYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHAPPLGGYRLTAKCFGYLTRQLMGLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPDEVVQQRPNANAVQSMENVLEIQGKYWRSLQRSASKLGYSLSEVLRSESEETETVTAMASLSVANKHISKRTEEEPMEEE
|
Nucleotide Sequence (Fasta) | CTAGTGGACG TGAGCACGGC GGCTGTGCTC CCCATGCAGG TGCCCCCTAC CACCCCCAAC 60 ATTCTCCCCA TGGACCTCCG CATCGNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 120 NNNNNNNNNN NNNAACAGCA GCTACAGGAG GAGCTCCTGT CTCTGAAGCA CAAGCAGCAG 180 GTCCAGAGAC AGCTGCTGAT CGCAGAGTTC CAGAGGCAGC ATGAACAACT GTCCAGGCAG 240 CACGAGGTGC AGCTACAGGA ACACATCAAG CACCAGCAGG ATCTGCTGGC CCTGAAGCAC 300 CAGCAGGAGC TGCTGGAGCA CCAGAGGAAG ATGGAGCGCC ACCGCCTGGA GCAGGAGGTG 360 GAGAAGCAGC AGCGGGAGCA CAAGCTGCAG CAGCTCAAGA ACAAGGAGCG GGGCCAGGAG 420 AGTGCGGTAG CGAGCACAGA GGTGAAGATG CGCCTGCAGG AGTTTGTCCT GAACAAGAAG 480 AAGGCGTTGG CCCACAGGAG CCTGAACCAC TGCCTGCCCA GCGACCCACG CTACTGGTAT 540 GGGAAAACTC AGCACAGTTC TCTGGACCAG AGCTCGCCGC CGCAGACCGC CCTCTCGGCC 600 TACAACCACT CGATGCTGGG GATGTACGAC TCGCGGGACG ACTTCCCCCT GCGCAAGACA 660 GCGTCGGAGC CCAACCTGAA GCTGCGGTCC CGGTTGAAGC AGAAGGTGAC GGAGCGGCGC 720 AGCAGCCCTC TGCTCCGCAG GAAGGACGGC GCCATCACCA CCGCCAAGAA GCGCTCCCTG 780 GACATGGCCG AATCGGCGTG TAACAGCGCC CCTGGATCCG GCCCATCCTC CCCCAACAAC 840 AGCTCCAGTA ACATCCCCCA CGAGAACGGA CTGCCCATTT CTAGCAGCCC GTGTGAGGTA 900 TCCCTGCTCC AGAGGCTGGC GGCCAGAGAT GGCTCTGTGA GCCAGCTGTC TCTCTACACC 960 TCACCCTCAC TGCCCAACAT CACCCTGGGC CTGCCAGCCA CCGGCCCGGC CAGCAGCTTA 1020 CTGTCAGTCC GTCAGGACGG AGAGAGCCGG CTGGCGTTGC AAGGGTTACA GCACGGGATC 1080 CCGTTGTCTC CGCCGTTCCG GCCCGGCACT CACTTGCCGG CCTACCTGGA GGGGGCTGGG 1140 GTGCCTGGGG GCTCCCACAA CCCCCTCCTC CAACACATGG TCCTACTGGA GCAGGCCCAC 1200 AACCCACTAG GACTCCCCCT GTCCTCGCCC TCCGTGTCCA AGCTGGCACG GGGCCACCGG 1260 CCCCTGGGAC GCACCCAGTC GGCCCCCCTG CCCCAGCAGC AGGCCGGGCC GGCCCAGGCC 1320 CTGCAGCAGC TGGTGGTCCA GCAGCAGCAC CAACAGTTCC TGGAGAAACA CAAGCAGCAG 1380 TTCCAGCAGC AACANNNNNN NNNNNNNNNN NCCTCCTCCT CCTCCTCCTC CTCCCGCCAG 1440 CACCAGAGCC ATCCCGAGGA GACGGAGGAG GAGCTCCGGG AGCACCAGGG GCTCTCCTCG 1500 GTCTCGCCCC CAGCTCCTCC TTCCACAGCA GCGCCGCCTC CCTGGCCTCA GCGGGGCCTG 1560 GTCATCAAGC AGGAGCCCCT TGACCCCCAG GAGGAGCAGG AGGAGCGGGA GCGGCAGACC 1620 GAGGAGCTGC TCTTCAGACA GCAGCAGGCT CTGCTGTTGG AGCAGCAGAG GATCCACCAG 1680 CTGAGGAACT ACCAGGCCTC CATGGAGGCG GCTGGCCTCT CCATCAGCTT CGCCGGGCAC 1740 CGCCCCTTGT CGAGGGCCCA ATCATCACCC GCCTCCGCCT CCTTCCCATT GGTGGTCCAA 1800 GACCCGCCCT CCAAGCCACG CTTCACCACA GGTCTGGTGT ACGACTCTCT GATGCAGAAG 1860 CACCAGTGCA TCTGTGGTAA CAGCACCAGC CACCCGGAGC ACGCTGGCCG CATCCAAAGC 1920 ATCTGGTCCA GGCTGCAGGA AAGAGGCCTG CGGGCACACT GTGAGNNNNN NNNNNNNNNN 1980 NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2040 NNNNNNNNNN NNNNNNNNNN NNNNNNNNGT GCTGTGAACC CCATGTTTGT GCGACTGCCT 2100 TGTGGAGGAA TCGGGGTGGA CAGTGACACC ATTTGGAACG ACGTGCACTC GTCGAGCGCG 2160 GCCCGCCTGG CGGTGGGCTC GGTGGTGGAG CTGGTGTTCA AGGTCGCATC CGGAGAGATC 2220 AAGAACGGGT TCGCCGTGGT ACGACCCCCG GGCCACCACG CGGAGGAGAG CACGCCCATG 2280 GGTTTCTGTT ACTTCAACTC GGTTGCCATC GCTGCCAAAC TTCTCCAGCA GAGGCTGAGT 2340 GTCAGCAAGA TCCTCATCGT GGACTGGGAC GTTCACCATG GTAACGGTAC TCAGCAGGCA 2400 TTCTACAGCG ACCCCAACGT CCTCTATCTG TCCCTCCATC GCTACGACGA CGGCAACTTC 2460 TTCCCTGGCA GCGGGGCGCC AGATGAGGTG GGCACAGGAG CAGGGGTTGG CTTCAACGTC 2520 AACATGGCGT TCACTGGAGG ACTGGAGCCT CCCATGGGCG ACGCCGACTA CCTGGCTGCC 2580 TTCAGGACGG TGGTGATGCC CATCGCCAAT GAGTTTGCCC CCGACGTGGT GCTGGTGTCC 2640 TCGGGCTTCG ACGCGGTGGA GGGCCACGCT CCTCCGCTGG GAGGTTACAG ACTCACCGCC 2700 AAATGCTTCG GCTACCTGAC CCGGCAGCTG ATGGGCCTGG CTGGGGGGAG GGTGGTGCTG 2760 GCGCTGGAGG GGGGTCACGA CCTCACCGCC ATCTGTGACG CCTCCGAGGC CTGCGTCTCC 2820 GCGCTGCTCG GCAACGAGCT GGACCCACTA CCAGACGAGG TGGTGCAGCA GAGACCCAAC 2880 GCCAACGCTG TCCAGTCCAT GGAGAATGTC CTGGAGATCC AGGGCAAGTA CTGGCGCTCT 2940 CTGCAGCGGT CTGCGTCGAA GCTGGGCTAC TCCCTGAGCG AGGTGCTCCG CTCTGAGAGC 3000 GAAGAGACCG AGACGGTCAC CGCCATGGCG TCACTGTCTG TCGCCAACAA GCACATCAGC 3060 AAAAGGACTG AGGAGGAGCC GATGGAGGAG GAA
3094Nucleotide Fasta Sequence
>ENSGMOP00000006368.1|Class-I|Gadus morhua CTAGTGGACGTGAGCACGGCGGCTGTGCTCCCCATGCAGGTGCCCCCTACCACCCCCAACATTCTCCCCATGGACCTCCGCATCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACAGCAGCTACAGGAGGAGCTCCTGTCTCTGAAGCACAAGCAGCAGGTCCAGAGACAGCTGCTGATCGCAGAGTTCCAGAGGCAGCATGAACAACTGTCCAGGCAGCACGAGGTGCAGCTACAGGAACACATCAAGCACCAGCAGGATCTGCTGGCCCTGAAGCACCAGCAGGAGCTGCTGGAGCACCAGAGGAAGATGGAGCGCCACCGCCTGGAGCAGGAGGTGGAGAAGCAGCAGCGGGAGCACAAGCTGCAGCAGCTCAAGAACAAGGAGCGGGGCCAGGAGAGTGCGGTAGCGAGCACAGAGGTGAAGATGCGCCTGCAGGAGTTTGTCCTGAACAAGAAGAAGGCGTTGGCCCACAGGAGCCTGAACCACTGCCTGCCCAGCGACCCACGCTACTGGTATGGGAAAACTCAGCACAGTTCTCTGGACCAGAGCTCGCCGCCGCAGACCGCCCTCTCGGCCTACAACCACTCGATGCTGGGGATGTACGACTCGCGGGACGACTTCCCCCTGCGCAAGACAGCGTCGGAGCCCAACCTGAAGCTGCGGTCCCGGTTGAAGCAGAAGGTGACGGAGCGGCGCAGCAGCCCTCTGCTCCGCAGGAAGGACGGCGCCATCACCACCGCCAAGAAGCGCTCCCTGGACATGGCCGAATCGGCGTGTAACAGCGCCCCTGGATCCGGCCCATCCTCCCCCAACAACAGCTCCAGTAACATCCCCCACGAGAACGGACTGCCCATTTCTAGCAGCCCGTGTGAGGTATCCCTGCTCCAGAGGCTGGCGGCCAGAGATGGCTCTGTGAGCCAGCTGTCTCTCTACACCTCACCCTCACTGCCCAACATCACCCTGGGCCTGCCAGCCACCGGCCCGGCCAGCAGCTTACTGTCAGTCCGTCAGGACGGAGAGAGCCGGCTGGCGTTGCAAGGGTTACAGCACGGGATCCCGTTGTCTCCGCCGTTCCGGCCCGGCACTCACTTGCCGGCCTACCTGGAGGGGGCTGGGGTGCCTGGGGGCTCCCACAACCCCCTCCTCCAACACATGGTCCTACTGGAGCAGGCCCACAACCCACTAGGACTCCCCCTGTCCTCGCCCTCCGTGTCCAAGCTGGCACGGGGCCACCGGCCCCTGGGACGCACCCAGTCGGCCCCCCTGCCCCAGCAGCAGGCCGGGCCGGCCCAGGCCCTGCAGCAGCTGGTGGTCCAGCAGCAGCACCAACAGTTCCTGGAGAAACACAAGCAGCAGTTCCAGCAGCAACANNNNNNNNNNNNNNNNNCCTCCTCCTCCTCCTCCTCCTCCCGCCAGCACCAGAGCCATCCCGAGGAGACGGAGGAGGAGCTCCGGGAGCACCAGGGGCTCTCCTCGGTCTCGCCCCCAGCTCCTCCTTCCACAGCAGCGCCGCCTCCCTGGCCTCAGCGGGGCCTGGTCATCAAGCAGGAGCCCCTTGACCCCCAGGAGGAGCAGGAGGAGCGGGAGCGGCAGACCGAGGAGCTGCTCTTCAGACAGCAGCAGGCTCTGCTGTTGGAGCAGCAGAGGATCCACCAGCTGAGGAACTACCAGGCCTCCATGGAGGCGGCTGGCCTCTCCATCAGCTTCGCCGGGCACCGCCCCTTGTCGAGGGCCCAATCATCACCCGCCTCCGCCTCCTTCCCATTGGTGGTCCAAGACCCGCCCTCCAAGCCACGCTTCACCACAGGTCTGGTGTACGACTCTCTGATGCAGAAGCACCAGTGCATCTGTGGTAACAGCACCAGCCACCCGGAGCACGCTGGCCGCATCCAAAGCATCTGGTCCAGGCTGCAGGAAAGAGGCCTGCGGGCACACTGTGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTGTGAACCCCATGTTTGTGCGACTGCCTTGTGGAGGAATCGGGGTGGACAGTGACACCATTTGGAACGACGTGCACTCGTCGAGCGCGGCCCGCCTGGCGGTGGGCTCGGTGGTGGAGCTGGTGTTCAAGGTCGCATCCGGAGAGATCAAGAACGGGTTCGCCGTGGTACGACCCCCGGGCCACCACGCGGAGGAGAGCACGCCCATGGGTTTCTGTTACTTCAACTCGGTTGCCATCGCTGCCAAACTTCTCCAGCAGAGGCTGAGTGTCAGCAAGATCCTCATCGTGGACTGGGACGTTCACCATGGTAACGGTACTCAGCAGGCATTCTACAGCGACCCCAACGTCCTCTATCTGTCCCTCCATCGCTACGACGACGGCAACTTCTTCCCTGGCAGCGGGGCGCCAGATGAGGTGGGCACAGGAGCAGGGGTTGGCTTCAACGTCAACATGGCGTTCACTGGAGGACTGGAGCCTCCCATGGGCGACGCCGACTACCTGGCTGCCTTCAGGACGGTGGTGATGCCCATCGCCAATGAGTTTGCCCCCGACGTGGTGCTGGTGTCCTCGGGCTTCGACGCGGTGGAGGGCCACGCTCCTCCGCTGGGAGGTTACAGACTCACCGCCAAATGCTTCGGCTACCTGACCCGGCAGCTGATGGGCCTGGCTGGGGGGAGGGTGGTGCTGGCGCTGGAGGGGGGTCACGACCTCACCGCCATCTGTGACGCCTCCGAGGCCTGCGTCTCCGCGCTGCTCGGCAACGAGCTGGACCCACTACCAGACGAGGTGGTGCAGCAGAGACCCAACGCCAACGCTGTCCAGTCCATGGAGAATGTCCTGGAGATCCAGGGCAAGTACTGGCGCTCTCTGCAGCGGTCTGCGTCGAAGCTGGGCTACTCCCTGAGCGAGGTGCTCCGCTCTGAGAGCGAAGAGACCGAGACGGTCACCGCCATGGCGTCACTGTCTGTCGCCAACAAGCACATCAGCAAAAGGACTGAGGAGGAGCCGATGGAGGAGGAA
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |