Tag |
Content |
WERAM ID |
WERAM-Asm-0202 |
Ensembl Protein ID |
ENSAMXP00000018862.1 |
Gene Name |
hdac4 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
2.60e-148 |
493.7 |
9 |
876 |
HDAC |
Class-I |
7.70e-28 |
98.2 |
551 |
842 |
|
Organism |
Astyanax mexicanus |
Domain Profile |
HDAC Class-II
class-2.txt 62 vHseehvelletae.klekeelesltvd 88 H++e++e+ ++ e + +++ele+++ + ENSAMXP00000018862.1 9 KHQQELLEHQRKLErHRREQELEKQQRE 36 3444444433333333333333331111 PP class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles...... 84 +glvyd+ m khq++++n+++hpE+++Riq+i+srlqe+gl++k+e++++rkat+eelq+vHse+hv l++t+ +k l+ ENSAMXP00000018862.1 532 TGLVYDTLMQKHQCMCGNTNTHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHVMLYGTNPLRQK--LDIsilkgn 618 79***********************************************************************54444..4444599** PP class-2.txt 85 ..............ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeesta...mGFClfnnvavaakll 156 ++vdsd+i++e++s++aarlavG+v+elv+kv++gelkngfavvRPPGHHaeest+ GFC+fn+va+aakll ENSAMXP00000018862.1 619 ssvtpmfvrlpcggIGVDSDTIWNEVHSSSAARLAVGSVVELVFKVASGELKNGFAVVRPPGHHAEESTPinnRGFCYFNSVAIAAKLL 707 ********************************************************************974446*************** PP class-2.txt 157 qqklkvkkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafr 242 qq+l+v+kilivDwDvHhGnGtq++fy+dp++lylSlHRyd+g+ffp gsga+devg+g+g+gfnvN+a++ggl mgdaeylaafr ENSAMXP00000018862.1 708 QQRLNVSKILIVDWDVHHGNGTQQAFYSDPNILYLSLHRYDDGNFFP--GSGAPDEVGSGPGLGFNVNMAFTGGLeppMGDAEYLAAFR 794 ***********************************************..**************************************** PP class-2.txt 243 evvlpiakeFkPdlvlvsaGfDaaeg..dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322 +vv+pia+eF+Pd+vlvs+GfDa+eg +plgg+++takc+++ltkql++laggr+vl+lEGG++l+ai++a+ea+v+aLlg ENSAMXP00000018862.1 795 TVVMPIANEFAPDVVLVSSGFDAVEGhaSPLGGYRLTAKCFGYLTKQLMGLAGGRLVLALEGGHDLTAICDASEACVSALLG 876 **************************999***************************************************96 PP
HDAC Class-I
class-1.txt 18 qkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae..........elskelkkf...nvgedc. 92 ++hp r++ + + + + gl k e ++ +ka+ eel+++hse+++ + + p ++ +++ + + ++g d+ ENSAMXP00000018862.1 551 NTHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHVMLYGTN-PLRQKldisilkgnsSVTPMFVRLpcgGIGVDSd 638 566777777777777777778888888888888888888888887777543322.2222222344433332222222222223444441 PP class-1.txt 93 Pvfdglfey..cqlitGasleaakkLnkkead..iainwaGGlhhakks...easGfcyvnDivlailellk..khkrvlyididlhhG 172 + +++++ ++l G+ +e + k+ ++e + a+ G hha s + Gfcy n + +a l++ + +++l +d d+hhG ENSAMXP00000018862.1 639 TIWNEVHSSsaARLAVGSVVELVFKVASGELKngFAVVRPPG-HHAEEStpiNNRGFCYFNSVAIAAKLLQQrlNVSKILIVDWDVHHG 726 355555543114556777778888888776551255555555.888876233578**********988777644678************ PP class-1.txt 173 Dgveeafyttdrvmtvsfhkyge.effPgtGdlsdvgaekgkyyavnvPlkdgid....DesyekifksviskvieafePeavvlqcGa 256 +g ++afy ++ +s+h+y++ +ffPg+G ++vg + g + vn+ ++ g++ D +y + f++v+ ++ + f P++v++ G ENSAMXP00000018862.1 727 NGTQQAFYSDPNILYLSLHRYDDgNFFPGSGAPDEVGSGPGLGFNVNMAFTGGLEppmgDAEYLAAFRTVVMPIANEFAPDVVLVSSGF 815 *********************9746***********************98888644444****************************** PP class-1.txt 257 Dslag..Drlgefnlsikghaecvkfv 281 D++ g +lg + l+ k ++ k + ENSAMXP00000018862.1 816 DAVEGhaSPLGGYRLTAKCFGYLTKQL 842 ***872258*******99998766655 PP
|
Protein Sequence (Fasta) | HQQELLALKH QQELLEHQRK LERHRREQEL EKQQREQKLH QLKNKERGQE SAVASTEVKM 60 RLQEFVLNKK KALVQRSLNH CMPSDPRYWY GKTQHSSLDQ SSPPQTGIST YNHPVLGLYD 120 SKDDFPLRKT ASEPNLKLRS RLKQKVTERR SSPLLRRREG PITTAKKRSL DMAESACNSA 180 PGSGPSSPNN SSNNITNENG IAGSISNSPV EVQQLSTHSI ILHNIQLCHL SLYTSPSLPN 240 ITLGLPAPSS SSVASGQQEG ERLAMANLQP GLPLTTPFIP GAHLPTYLAA SALEREGGSA 300 HNPLLQHMVS QNPLVSGLGN LPLQPPSIHK LRQHRPLGRT QSAPLPQNAQ ALQQLVVQQQ 360 HQQFLEKHKQ QFQQQQLHMS KIVPTATQVC KYLHTHSLFR PSKEELPIKQ VSLDQKNAIK 420 SSQLCSKKVE RLFMTVETVT PVKGVALPLS SSPQLSSSDQ LHSEMSLCVN QALLLEQQRI 480 HQLRNYQASM EAAGLSVTFP GHRPLSRAQS SPASATFPIV VQEPPTKPRF TTGLVYDTLM 540 QKHQCMCGNT NTHPEHAGRI QSIWSRLQET GLRGKCECIR GRKATLEELQ TVHSEAHVML 600 YGTNPLRQKL DISILKGNSS VTPMFVRLPC GGIGVDSDTI WNEVHSSSAA RLAVGSVVEL 660 VFKVASGELK NGFAVVRPPG HHAEESTPIN NRGFCYFNSV AIAAKLLQQR LNVSKILIVD 720 WDVHHGNGTQ QAFYSDPNIL YLSLHRYDDG NFFPGSGAPD EVGSGPGLGF NVNMAFTGGL 780 EPPMGDAEYL AAFRTVVMPI ANEFAPDVVL VSSGFDAVEG HASPLGGYRL TAKCFGYLTK 840 QLMGLAGGRL VLALEGGHDL TAICDASEAC VSALLGNELE PLSDEVLQQR PNLNAVRSIE 900 KVLESHSKYW RCLQRGASTL GYSLVEAQKC ETEEAETVTA MASLSVAAKH MGKRSEEEPM 960 EEEPPL 966Protein Fasta Sequence
>ENSAMXP00000018862.1|Class-I|Astyanax mexicanus HQQELLALKHQQELLEHQRKLERHRREQELEKQQREQKLHQLKNKERGQESAVASTEVKMRLQEFVLNKKKALVQRSLNHCMPSDPRYWYGKTQHSSLDQSSPPQTGISTYNHPVLGLYDSKDDFPLRKTASEPNLKLRSRLKQKVTERRSSPLLRRREGPITTAKKRSLDMAESACNSAPGSGPSSPNNSSNNITNENGIAGSISNSPVEVQQLSTHSIILHNIQLCHLSLYTSPSLPNITLGLPAPSSSSVASGQQEGERLAMANLQPGLPLTTPFIPGAHLPTYLAASALEREGGSAHNPLLQHMVSQNPLVSGLGNLPLQPPSIHKLRQHRPLGRTQSAPLPQNAQALQQLVVQQQHQQFLEKHKQQFQQQQLHMSKIVPTATQVCKYLHTHSLFRPSKEELPIKQVSLDQKNAIKSSQLCSKKVERLFMTVETVTPVKGVALPLSSSPQLSSSDQLHSEMSLCVNQALLLEQQRIHQLRNYQASMEAAGLSVTFPGHRPLSRAQSSPASATFPIVVQEPPTKPRFTTGLVYDTLMQKHQCMCGNTNTHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHVMLYGTNPLRQKLDISILKGNSSVTPMFVRLPCGGIGVDSDTIWNEVHSSSAARLAVGSVVELVFKVASGELKNGFAVVRPPGHHAEESTPINNRGFCYFNSVAIAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYSDPNILYLSLHRYDDGNFFPGSGAPDEVGSGPGLGFNVNMAFTGGLEPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHASPLGGYRLTAKCFGYLTKQLMGLAGGRLVLALEGGHDLTAICDASEACVSALLGNELEPLSDEVLQQRPNLNAVRSIEKVLESHSKYWRCLQRGASTLGYSLVEAQKCETEEAETVTAMASLSVAAKHMGKRSEEEPMEEEPPL
|
Nucleotide Sequence (Fasta) | CATCAGCAGG AGCTGCTGGC TCTGAAGCAT CAGCAGGAGC TTCTGGAGCA CCAGAGGAAG 60 TTGGAGCGGC ACCGGCGCGA GCAGGAGCTG GAGAAACAGC AGCGCGAGCA GAAGCTACAT 120 CAGCTCAAGA ACAAGGAGCG CGGCCAAGAG AGTGCGGTGG CCAGTACGGA GGTGAAGATG 180 CGTCTGCAGG AGTTCGTGCT GAATAAGAAG AAAGCTCTGG TCCAGAGGAG CCTCAACCAC 240 TGCATGCCCA GTGACCCTCG CTACTGGTAT GGGAAAACCC AGCACAGTTC ACTGGACCAG 300 AGTTCTCCAC CTCAGACAGG GATTTCCACT TATAACCACC CGGTGCTGGG CCTCTACGAC 360 TCTAAAGACG ACTTCCCGCT CCGCAAGACA GCGTCTGAGC CAAACCTGAA GCTACGCTCC 420 AGACTGAAGC AGAAGGTGAC GGAGCGGCGG AGCAGCCCAC TACTGCGGAG GAGGGAGGGG 480 CCGATCACCA CGGCTAAGAA ACGCTCACTG GACATGGCAG AATCGGCGTG TAACAGTGCT 540 CCTGGGTCCG GACCGAGCTC ACCCAACAAC AGCTCCAACA ATATCACTAA CGAGAACGGC 600 ATTGCTGGGT CCATCTCCAA CAGTCCGGTA GAGGTACAGC AGCTCTCAAC ACACTCCATA 660 ATTCTGCACA ATATACAGCT CTGCCATTTG TCCCTGTACA CATCACCCTC CCTCCCCAAC 720 ATCACCCTGG GTCTGCCAGC CCCCAGCTCA TCAAGCGTGG CGTCTGGTCA GCAGGAAGGT 780 GAACGGCTGG CGATGGCGAA CCTGCAGCCT GGATTACCCT TAACCACTCC CTTCATCCCC 840 GGAGCCCACC TGCCTACATA CCTGGCTGCC TCCGCTCTAG AGCGGGAGGG AGGCTCCGCC 900 CACAACCCGC TGCTGCAGCA CATGGTCTCC CAGAACCCTC TGGTGTCAGG CCTGGGTAAT 960 CTGCCCCTGC AGCCTCCCTC CATCCATAAA CTGCGGCAGC ACCGGCCACT GGGCCGAACG 1020 CAGTCGGCGC CGCTCCCCCA GAACGCCCAG GCTCTGCAGC AGCTCGTGGT CCAGCAGCAG 1080 CACCAGCAGT TCCTGGAGAA ACACAAACAG CAGTTCCAGC AGCAGCAACT TCATATGAGC 1140 AAGATTGTAC CCACTGCTAC ACAGGTGTGC AAATATTTGC ACACACACAG CTTGTTTAGA 1200 CCCAGTAAAG AAGAATTGCC AATAAAACAA GTCTCTCTGG ATCAGAAAAA TGCCATTAAA 1260 TCCTCACAGC TATGCTCCAA AAAAGTGGAA AGGCTTTTCA TGACAGTAGA GACAGTTACT 1320 CCAGTAAAAG GAGTCGCTCT TCCTCTCTCT TCGTCTCCAC AGCTTTCCTC GTCTGATCAG 1380 CTTCACTCTG AAATGTCGCT GTGTGTGAAT CAGGCTCTCC TGCTGGAGCA GCAGAGGATC 1440 CATCAGCTGA GGAACTATCA GGCGTCAATG GAGGCCGCCG GCCTGTCCGT CACGTTCCCC 1500 GGACACCGCC CACTGTCCAG AGCACAGTCG TCCCCGGCCT CAGCCACCTT CCCTATCGTG 1560 GTGCAGGAGC CACCAACCAA ACCACGCTTC ACCACCGGGC TGGTGTATGA CACTTTAATG 1620 CAGAAGCATC AGTGTATGTG CGGTAACACC AACACCCACC CGGAGCATGC AGGCCGCATC 1680 CAGAGCATCT GGTCCAGACT GCAGGAGACC GGACTGCGCG GCAAGTGTGA GTGTATTCGG 1740 GGCAGGAAAG CCACACTGGA GGAACTGCAG ACGGTCCACT CTGAAGCTCA TGTAATGCTG 1800 TATGGAACTA ACCCACTAAG ACAGAAACTA GACATATCTA TCTTGAAAGG TAATAGTTCT 1860 GTGACACCCA TGTTCGTGAG GTTGCCCTGT GGGGGGATTG GGGTGGATAG TGACACTATC 1920 TGGAATGAGG TCCACTCGTC TAGCGCAGCC CGCCTGGCTG TCGGCTCTGT GGTGGAGCTG 1980 GTATTTAAAG TGGCATCCGG AGAGCTAAAG AATGGCTTTG CTGTGGTTCG GCCTCCAGGA 2040 CACCACGCTG AGGAGAGCAC CCCAATAAAT AACAGGGGAT TCTGCTATTT CAACTCTGTG 2100 GCCATCGCAG CCAAGCTTCT GCAGCAGCGG CTGAACGTCA GCAAGATCCT GATAGTGGAC 2160 TGGGATGTTC ATCATGGCAA CGGGACCCAA CAGGCTTTCT ACAGCGACCC CAACATCTTA 2220 TACCTTTCTC TCCATCGCTA CGATGACGGG AACTTCTTCC CTGGCAGTGG TGCTCCCGAT 2280 GAGGTGGGCT CGGGACCTGG CCTTGGCTTC AACGTGAACA TGGCCTTCAC CGGTGGCCTG 2340 GAACCTCCCA TGGGCGACGC AGAGTATCTG GCTGCCTTCA GAACGGTGGT GATGCCCATC 2400 GCTAATGAGT TTGCTCCCGA CGTGGTGCTG GTTTCGTCGG GGTTCGACGC AGTGGAGGGC 2460 CACGCTTCGC CACTTGGAGG ATACAGACTC ACGGCCAAGT GTTTTGGCTA CCTGACCAAG 2520 CAGCTGATGG GCCTGGCCGG CGGCCGCCTG GTGCTCGCCC TGGAGGGGGG TCATGACCTC 2580 ACTGCCATTT GCGATGCGTC TGAAGCATGT GTTTCTGCTT TACTAGGAAA CGAGCTGGAG 2640 CCACTTTCTG ATGAGGTTCT GCAGCAAAGG CCCAATCTCA ATGCTGTGCG CTCCATAGAG 2700 AAAGTTCTGG AATCACATAG TAAGTACTGG CGCTGTCTGC AGCGCGGTGC TTCGACGCTG 2760 GGCTACTCTC TTGTTGAAGC TCAGAAGTGT GAGACAGAGG AGGCCGAGAC TGTGACCGCC 2820 ATGGCCTCTC TGTCTGTAGC TGCCAAACAC ATGGGGAAGA GGTCCGAGGA GGAGCCGATG 2880 GAGGAAGAGC CGCCACTGTA G
2902Nucleotide Fasta Sequence
>ENSAMXP00000018862.1|Class-I|Astyanax mexicanus CATCAGCAGGAGCTGCTGGCTCTGAAGCATCAGCAGGAGCTTCTGGAGCACCAGAGGAAGTTGGAGCGGCACCGGCGCGAGCAGGAGCTGGAGAAACAGCAGCGCGAGCAGAAGCTACATCAGCTCAAGAACAAGGAGCGCGGCCAAGAGAGTGCGGTGGCCAGTACGGAGGTGAAGATGCGTCTGCAGGAGTTCGTGCTGAATAAGAAGAAAGCTCTGGTCCAGAGGAGCCTCAACCACTGCATGCCCAGTGACCCTCGCTACTGGTATGGGAAAACCCAGCACAGTTCACTGGACCAGAGTTCTCCACCTCAGACAGGGATTTCCACTTATAACCACCCGGTGCTGGGCCTCTACGACTCTAAAGACGACTTCCCGCTCCGCAAGACAGCGTCTGAGCCAAACCTGAAGCTACGCTCCAGACTGAAGCAGAAGGTGACGGAGCGGCGGAGCAGCCCACTACTGCGGAGGAGGGAGGGGCCGATCACCACGGCTAAGAAACGCTCACTGGACATGGCAGAATCGGCGTGTAACAGTGCTCCTGGGTCCGGACCGAGCTCACCCAACAACAGCTCCAACAATATCACTAACGAGAACGGCATTGCTGGGTCCATCTCCAACAGTCCGGTAGAGGTACAGCAGCTCTCAACACACTCCATAATTCTGCACAATATACAGCTCTGCCATTTGTCCCTGTACACATCACCCTCCCTCCCCAACATCACCCTGGGTCTGCCAGCCCCCAGCTCATCAAGCGTGGCGTCTGGTCAGCAGGAAGGTGAACGGCTGGCGATGGCGAACCTGCAGCCTGGATTACCCTTAACCACTCCCTTCATCCCCGGAGCCCACCTGCCTACATACCTGGCTGCCTCCGCTCTAGAGCGGGAGGGAGGCTCCGCCCACAACCCGCTGCTGCAGCACATGGTCTCCCAGAACCCTCTGGTGTCAGGCCTGGGTAATCTGCCCCTGCAGCCTCCCTCCATCCATAAACTGCGGCAGCACCGGCCACTGGGCCGAACGCAGTCGGCGCCGCTCCCCCAGAACGCCCAGGCTCTGCAGCAGCTCGTGGTCCAGCAGCAGCACCAGCAGTTCCTGGAGAAACACAAACAGCAGTTCCAGCAGCAGCAACTTCATATGAGCAAGATTGTACCCACTGCTACACAGGTGTGCAAATATTTGCACACACACAGCTTGTTTAGACCCAGTAAAGAAGAATTGCCAATAAAACAAGTCTCTCTGGATCAGAAAAATGCCATTAAATCCTCACAGCTATGCTCCAAAAAAGTGGAAAGGCTTTTCATGACAGTAGAGACAGTTACTCCAGTAAAAGGAGTCGCTCTTCCTCTCTCTTCGTCTCCACAGCTTTCCTCGTCTGATCAGCTTCACTCTGAAATGTCGCTGTGTGTGAATCAGGCTCTCCTGCTGGAGCAGCAGAGGATCCATCAGCTGAGGAACTATCAGGCGTCAATGGAGGCCGCCGGCCTGTCCGTCACGTTCCCCGGACACCGCCCACTGTCCAGAGCACAGTCGTCCCCGGCCTCAGCCACCTTCCCTATCGTGGTGCAGGAGCCACCAACCAAACCACGCTTCACCACCGGGCTGGTGTATGACACTTTAATGCAGAAGCATCAGTGTATGTGCGGTAACACCAACACCCACCCGGAGCATGCAGGCCGCATCCAGAGCATCTGGTCCAGACTGCAGGAGACCGGACTGCGCGGCAAGTGTGAGTGTATTCGGGGCAGGAAAGCCACACTGGAGGAACTGCAGACGGTCCACTCTGAAGCTCATGTAATGCTGTATGGAACTAACCCACTAAGACAGAAACTAGACATATCTATCTTGAAAGGTAATAGTTCTGTGACACCCATGTTCGTGAGGTTGCCCTGTGGGGGGATTGGGGTGGATAGTGACACTATCTGGAATGAGGTCCACTCGTCTAGCGCAGCCCGCCTGGCTGTCGGCTCTGTGGTGGAGCTGGTATTTAAAGTGGCATCCGGAGAGCTAAAGAATGGCTTTGCTGTGGTTCGGCCTCCAGGACACCACGCTGAGGAGAGCACCCCAATAAATAACAGGGGATTCTGCTATTTCAACTCTGTGGCCATCGCAGCCAAGCTTCTGCAGCAGCGGCTGAACGTCAGCAAGATCCTGATAGTGGACTGGGATGTTCATCATGGCAACGGGACCCAACAGGCTTTCTACAGCGACCCCAACATCTTATACCTTTCTCTCCATCGCTACGATGACGGGAACTTCTTCCCTGGCAGTGGTGCTCCCGATGAGGTGGGCTCGGGACCTGGCCTTGGCTTCAACGTGAACATGGCCTTCACCGGTGGCCTGGAACCTCCCATGGGCGACGCAGAGTATCTGGCTGCCTTCAGAACGGTGGTGATGCCCATCGCTAATGAGTTTGCTCCCGACGTGGTGCTGGTTTCGTCGGGGTTCGACGCAGTGGAGGGCCACGCTTCGCCACTTGGAGGATACAGACTCACGGCCAAGTGTTTTGGCTACCTGACCAAGCAGCTGATGGGCCTGGCCGGCGGCCGCCTGGTGCTCGCCCTGGAGGGGGGTCATGACCTCACTGCCATTTGCGATGCGTCTGAAGCATGTGTTTCTGCTTTACTAGGAAACGAGCTGGAGCCACTTTCTGATGAGGTTCTGCAGCAAAGGCCCAATCTCAATGCTGTGCGCTCCATAGAGAAAGTTCTGGAATCACATAGTAAGTACTGGCGCTGTCTGCAGCGCGGTGCTTCGACGCTGGGCTACTCTCTTGTTGAAGCTCAGAAGTGTGAGACAGAGGAGGCCGAGACTGTGACCGCCATGGCCTCTCTGTCTGTAGCTGCCAAACACATGGGGAAGAGGTCCGAGGAGGAGCCGATGGAGGAAGAGCCGCCACTGTAG
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |