Tag |
Content |
WERAM ID |
WERAM-Ova-0200 |
Ensembl Protein ID |
ENSOARP00000020106.1 |
Gene Name |
HDAC4 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
6.70e-149 |
495.6 |
520 |
860 |
HDAC |
Class-I |
8.20e-28 |
98 |
538 |
825 |
|
Organism |
Ovis aries |
Domain Profile |
HDAC Class-II
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles...... 84 +glvyd+ mlkhq++++n+++hpE+++Riq+i+srlqe+gl++k+e++++rkat+eelq+vHse+h l++t+ +l++++l+s ENSOARP00000020106.1 520 TGLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSETHALLYGTN-PLNRQKLDSkkllav 607 79***********************************************************************.*************** PP class-2.txt 85 ............ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklk 161 ++vdsd+i++e++s+ aarlavG+v+elv+kv++gelkngfavvRPPGHHaeest+mGFC+fn+va+aakllqq+l+ ENSOARP00000020106.1 608 lpstfavgncggVGVDSDTIWNEVHSSGAARLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLS 696 ***************************************************************************************** PP class-2.txt 162 vkkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafrevvlp 247 v+k l+vDwDvHhGnGtq++fy+dp+vly+SlHRyd+g+ffp gsga+de + ++gfnvN+a++ggl mgdaeylaafr+vv+p ENSOARP00000020106.1 697 VSKTLVVDWDVHHGNGTQQAFYSDPRVLYISLHRYDDGNFFP--GSGAPDEAVGALALGFNVNMAFTGGLdppMGDAEYLAAFRTVVMP 783 ******************************************..********9************************************ PP class-2.txt 248 iakeFkPdlvlvsaGfDaaeg..dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322 ia+eF+Pd+vlvs+GfDa+eg +plgg++++akc+++ltkql++laggrvvl+lEGG++l+ai++a+ea+v+aLlg ENSOARP00000020106.1 784 IASEFAPDVVLVSSGFDAVEGhpTPLGGYNLSAKCFGYLTKQLMGLAGGRVVLALEGGHDLTAICDASEACVSALLG 860 *********************9*****************************************************96 PP
HDAC Class-I
class-1.txt 17 gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyi.....eflkkvepenaeelskelkkfnvge......dc.P 93 +++hp r++ + + + + gl k e ++ +ka+ eel+++hse + + l++ + ++++ l+ + f+vg+ d+ ENSOARP00000020106.1 538 TNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSETHAllygtNPLNRQKLDSKKLLAVLPSTFAVGNcggvgvDSdT 626 56788888888888888889999999999999999999999999876531111134555555555544444455665552211113212 PP class-1.txt 94 vfdglfey..cqlitGasleaakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellk..khkrvlyididlhhGDgve 176 + +++++ ++l G +e + k+ ++e + a+ hha s Gfcy n + +a l++ + ++ l +d d+hhG+g + ENSOARP00000020106.1 627 IWNEVHSSgaARLAVGCVVELVFKVATGELKngFAVVRPP-GHHAEESTPMGFCYFNSVAIAAKLLQQrlSVSKTLVVDWDVHHGNGTQ 714 4444444321456667777887787777655114454444.4*******************987777645789**************** PP class-1.txt 177 eafyttdrvmtvsfhkyge.effPgtGdlsdvgaekgkyyavnvPlkdgid....DesyekifksviskvieafePeavvlqcGaDsla 260 +afy rv+ +s+h+y++ +ffPg+G ++ + vn+ ++ g+d D +y + f++v+ ++ + f P++v++ G D++ ENSOARP00000020106.1 715 QAFYSDPRVLYISLHRYDDgNFFPGSGAPDEAVGALALGFNVNMAFTGGLDppmgDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVE 803 *****************9746*******99988888888*****999997666669********************************9 PP class-1.txt 261 gD..rlgefnlsikghaecvkf 280 g +lg +nls k ++ k ENSOARP00000020106.1 804 GHptPLGGYNLSAKCFGYLTKQ 825 963369*******999876655 PP
|
Protein Sequence (Fasta) | MQRRGPWAGA CSHSPPLSPA PGAVASTEVK MKLQEFVLNK KKALAHRNLN HCMSSDPRYW 60 YGKTQHSSLD QSSPPQSGAS ASYNHPVLGM YDAKDDFPLR KTASEPNLKL RSRLKQKVAE 120 RRSSPLLRRK DGPVVTALKK RPLSQRDSAC SSAPGSAPSS PNNSSGNVST ENGIAPTVPS 180 IPAETSLAHR LVAREGSVGP LPLYTSPSLP NITLGLPATG PSTGAAGQQE AERLALPALQ 240 QRVSLFPGAH LAPYLGTAPL ERDTGAAPGS LLQHVVLLEQ PPAQTPLVTV LGHLPVLNQK 300 LLNSNTGSPG IARELEVRPL HHQLPAPCRD RGLCPQHLVG HSQPAFSSRR HRGQCGPHCW 360 LLKQEQQFQR MRMIPKPSEP ARQPESHPEE TEEELREHQA LLEEPFLDRL PGQKEAHALA 420 GVQVKQEPIE SDDEEAEPPR EADPGQRLPT EQELLFRQQA LLLEQQRIHQ LRNYQASMEA 480 AGIPVSFGGH RPLSRAQSSP ASATFPMSVQ EPPAKPRFTT GLVYDTLMLK HQCTCGNTNS 540 HPEHAGRIQS IWSRLQETGL RGKCECIRGR KATLEELQTV HSETHALLYG TNPLNRQKLD 600 SKKLLAVLPS TFAVGNCGGV GVDSDTIWNE VHSSGAARLA VGCVVELVFK VATGELKNGF 660 AVVRPPGHHA EESTPMGFCY FNSVAIAAKL LQQRLSVSKT LVVDWDVHHG NGTQQAFYSD 720 PRVLYISLHR YDDGNFFPGS GAPDEAVGAL ALGFNVNMAF TGGLDPPMGD AEYLAAFRTV 780 VMPIASEFAP DVVLVSSGFD AVEGHPTPLG GYNLSAKCFG YLTKQLMGLA GGRVVLALEG 840 GHDLTAICDA SEACVSALLG NELDPLPEKV LQQRPNANAV RSMEKVIEIH SQYWRSLQRL 900 ASTAGYSLVE AQKCENEEAE TVTAMASLSV AVKAPEKRPD PSPLQASMHM Protein Fasta Sequence
>ENSOARP00000020106.1|Class-I|Ovis aries MQRRGPWAGACSHSPPLSPAPGAVASTEVKMKLQEFVLNKKKALAHRNLNHCMSSDPRYWYGKTQHSSLDQSSPPQSGASASYNHPVLGMYDAKDDFPLRKTASEPNLKLRSRLKQKVAERRSSPLLRRKDGPVVTALKKRPLSQRDSACSSAPGSAPSSPNNSSGNVSTENGIAPTVPSIPAETSLAHRLVAREGSVGPLPLYTSPSLPNITLGLPATGPSTGAAGQQEAERLALPALQQRVSLFPGAHLAPYLGTAPLERDTGAAPGSLLQHVVLLEQPPAQTPLVTVLGHLPVLNQKLLNSNTGSPGIARELEVRPLHHQLPAPCRDRGLCPQHLVGHSQPAFSSRRHRGQCGPHCWLLKQEQQFQRMRMIPKPSEPARQPESHPEETEEELREHQALLEEPFLDRLPGQKEAHALAGVQVKQEPIESDDEEAEPPREADPGQRLPTEQELLFRQQALLLEQQRIHQLRNYQASMEAAGIPVSFGGHRPLSRAQSSPASATFPMSVQEPPAKPRFTTGLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSETHALLYGTNPLNRQKLDSKKLLAVLPSTFAVGNCGGVGVDSDTIWNEVHSSGAARLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLSVSKTLVVDWDVHHGNGTQQAFYSDPRVLYISLHRYDDGNFFPGSGAPDEAVGALALGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLMGLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRPNANAVRSMEKVIEIHSQYWRSLQRLASTAGYSLVEAQKCENEEAETVTAMASLSVAVKAPEKRPDPSPLQASMHM
|
Nucleotide Sequence (Fasta) | ATGCAGCGCA GGGGGCCCTG GGCTGGAGCC TGCAGTCACT CGCCCCCGCT CTCTCCCGCG 60 CCAGGCGCCG TGGCCAGCAC GGAAGTGAAG ATGAAGCTGC AGGAGTTTGT CCTCAATAAA 120 AAGAAGGCCC TGGCTCATCG GAACCTGAAC CACTGCATGT CCAGCGACCC TCGCTACTGG 180 TACGGGAAGA CGCAGCACAG CTCACTGGAC CAGAGCTCCC CGCCCCAGAG CGGGGCGTCG 240 GCCTCCTACA ACCACCCGGT CCTGGGCATG TACGACGCCA AAGACGACTT CCCCCTCAGA 300 AAGACAGCTT CTGAACCCAA CCTGAAATTG CGCTCCAGGC TAAAGCAGAA AGTGGCTGAG 360 AGACGGAGCA GTCCCCTGCT ACGCAGGAAA GATGGGCCAG TGGTCACGGC TCTGAAAAAG 420 CGCCCCTTGT CTCAGAGAGA CTCGGCGTGC AGCAGTGCCC CAGGCTCCGC GCCCAGCTCG 480 CCCAACAACA GCTCCGGGAA CGTGAGCACG GAGAACGGGA TTGCGCCCAC CGTCCCCAGC 540 ATCCCGGCCG AGACCAGCCT GGCGCACAGA CTCGTGGCGC GAGAGGGCTC GGTGGGCCCG 600 CTGCCCCTCT ACACCTCACC ATCCCTGCCC AACATCACGC TGGGGCTGCC CGCCACCGGC 660 CCCTCCACGG GGGCAGCCGG CCAGCAGGAG GCCGAGAGAC TGGCCCTCCC CGCCCTGCAG 720 CAGCGCGTCT CCCTCTTCCC CGGCGCCCAC CTCGCCCCCT ACCTGGGCAC GGCGCCCCTG 780 GAGCGTGACA CAGGGGCGGC CCCTGGCTCC CTGCTGCAGC ACGTGGTCCT CCTGGAGCAG 840 CCGCCGGCAC AGACGCCCCT CGTCACAGTG TTAGGTCATC TTCCAGTTCT GAACCAGAAA 900 CTTCTGAACT CAAACACGGG CTCCCCCGGC ATCGCTCGGG AACTGGAAGT CAGGCCTCTC 960 CACCACCAGC TGCCCGCACC CTGCAGGGAC AGAGGCCTGT GTCCTCAGCA TCTGGTCGGT 1020 CACTCCCAAC CTGCTTTCAG CAGCAGGCGG CACCGAGGTC AGTGTGGCCC CCACTGCTGG 1080 TTATTGAAGC AAGAGCAGCA GTTTCAAAGA ATGAGAATGA TCCCCAAACC CAGCGAGCCA 1140 GCCCGGCAGC CCGAGAGCCA CCCCGAGGAG ACGGAGGAGG AGCTGCGGGA GCACCAGGCA 1200 CTCCTGGAGG AGCCCTTCCT GGACCGGCTC CCGGGGCAGA AGGAGGCCCA TGCGCTGGCT 1260 GGGGTGCAGG TGAAGCAGGA GCCCATCGAG AGTGACGACG AGGAGGCGGA GCCCCCACGG 1320 GAGGCGGACC CCGGCCAGCG GCTGCCCACG GAGCAGGAGC TGCTCTTCAG ACAGCAAGCC 1380 CTCCTCCTGG AGCAGCAGCG GATCCACCAG CTGAGGAACT ACCAGGCATC CATGGAGGCC 1440 GCTGGCATCC CCGTGTCCTT CGGCGGGCAC CGGCCCCTAT CCCGGGCGCA GTCCTCCCCC 1500 GCGTCTGCCA CCTTCCCTAT GTCCGTGCAG GAGCCCCCAG CCAAGCCGAG GTTTACCACA 1560 GGCCTCGTGT ACGACACGCT GATGCTGAAG CACCAGTGCA CCTGCGGGAA CACCAACAGC 1620 CACCCGGAGC ACGCCGGGCG CATCCAGAGC ATCTGGTCGC GGCTGCAGGA GACCGGCCTG 1680 CGAGGCAAAT GTGAGTGCAT CCGTGGACGG AAGGCCACGC TGGAGGAGCT GCAGACGGTG 1740 CACTCGGAGA CGCACGCCCT GCTCTACGGC ACGAACCCCC TCAACAGGCA GAAACTGGAC 1800 AGTAAGAAAC TTCTAGCTGT CCTCCCATCC ACCTTCGCTG TGGGGAACTG TGGAGGAGTC 1860 GGGGTGGACA GTGATACCAT ATGGAACGAG GTGCACTCGT CGGGGGCTGC CCGCCTGGCT 1920 GTGGGCTGTG TGGTGGAGCT GGTCTTCAAG GTGGCCACGG GGGAGCTGAA GAATGGCTTT 1980 GCTGTGGTCC GCCCTCCAGG ACACCACGCA GAGGAGAGCA CGCCCATGGG GTTCTGCTAC 2040 TTCAACTCCG TGGCCATCGC TGCCAAGCTT CTCCAGCAAA GGCTGAGCGT GAGCAAGACC 2100 CTCGTGGTAG ACTGGGACGT GCACCACGGG AACGGGACCC AGCAGGCCTT CTACAGCGAC 2160 CCCCGAGTGC TCTACATCTC CCTGCACCGC TACGACGACG GCAACTTCTT CCCAGGCAGC 2220 GGCGCCCCCG ACGAGGCTGT GGGGGCCCTT GCGTTGGGCT TCAACGTCAA CATGGCTTTC 2280 ACCGGCGGCC TGGACCCCCC CATGGGAGAC GCAGAGTACC TGGCGGCCTT CAGGACTGTG 2340 GTCATGCCGA TCGCCAGCGA GTTCGCCCCA GACGTGGTGC TGGTGTCCTC GGGCTTCGAC 2400 GCTGTGGAGG GCCACCCCAC GCCCCTCGGA GGCTACAACC TCTCCGCCAA ATGTTTCGGG 2460 TACCTGACGA AGCAGCTAAT GGGCCTGGCC GGTGGCCGGG TTGTCCTGGC GCTGGAGGGG 2520 GGCCACGATC TCACAGCCAT CTGCGACGCC TCGGAAGCCT GCGTCTCTGC TCTGCTGGGG 2580 AATGAGCTCG ATCCTCTCCC AGAAAAGGTC TTACAGCAGA GACCCAACGC CAACGCCGTG 2640 CGGTCGATGG AGAAGGTCAT TGAAATCCAC AGCCAGTACT GGCGCTCCCT GCAGAGGCTC 2700 GCCTCCACCG CTGGCTACTC CCTGGTCGAG GCCCAGAAGT GTGAGAACGA GGAAGCCGAG 2760 ACTGTCACTG CCATGGCCTC GCTGTCTGTG GCCGTGAAGG CCCCTGAGAA GAGACCTGAC 2820 CCCTCCCCAC TCCAAGCCTC CATGCACATG
2851Nucleotide Fasta Sequence
>ENSOARP00000020106.1|Class-I|Ovis aries ATGCAGCGCAGGGGGCCCTGGGCTGGAGCCTGCAGTCACTCGCCCCCGCTCTCTCCCGCGCCAGGCGCCGTGGCCAGCACGGAAGTGAAGATGAAGCTGCAGGAGTTTGTCCTCAATAAAAAGAAGGCCCTGGCTCATCGGAACCTGAACCACTGCATGTCCAGCGACCCTCGCTACTGGTACGGGAAGACGCAGCACAGCTCACTGGACCAGAGCTCCCCGCCCCAGAGCGGGGCGTCGGCCTCCTACAACCACCCGGTCCTGGGCATGTACGACGCCAAAGACGACTTCCCCCTCAGAAAGACAGCTTCTGAACCCAACCTGAAATTGCGCTCCAGGCTAAAGCAGAAAGTGGCTGAGAGACGGAGCAGTCCCCTGCTACGCAGGAAAGATGGGCCAGTGGTCACGGCTCTGAAAAAGCGCCCCTTGTCTCAGAGAGACTCGGCGTGCAGCAGTGCCCCAGGCTCCGCGCCCAGCTCGCCCAACAACAGCTCCGGGAACGTGAGCACGGAGAACGGGATTGCGCCCACCGTCCCCAGCATCCCGGCCGAGACCAGCCTGGCGCACAGACTCGTGGCGCGAGAGGGCTCGGTGGGCCCGCTGCCCCTCTACACCTCACCATCCCTGCCCAACATCACGCTGGGGCTGCCCGCCACCGGCCCCTCCACGGGGGCAGCCGGCCAGCAGGAGGCCGAGAGACTGGCCCTCCCCGCCCTGCAGCAGCGCGTCTCCCTCTTCCCCGGCGCCCACCTCGCCCCCTACCTGGGCACGGCGCCCCTGGAGCGTGACACAGGGGCGGCCCCTGGCTCCCTGCTGCAGCACGTGGTCCTCCTGGAGCAGCCGCCGGCACAGACGCCCCTCGTCACAGTGTTAGGTCATCTTCCAGTTCTGAACCAGAAACTTCTGAACTCAAACACGGGCTCCCCCGGCATCGCTCGGGAACTGGAAGTCAGGCCTCTCCACCACCAGCTGCCCGCACCCTGCAGGGACAGAGGCCTGTGTCCTCAGCATCTGGTCGGTCACTCCCAACCTGCTTTCAGCAGCAGGCGGCACCGAGGTCAGTGTGGCCCCCACTGCTGGTTATTGAAGCAAGAGCAGCAGTTTCAAAGAATGAGAATGATCCCCAAACCCAGCGAGCCAGCCCGGCAGCCCGAGAGCCACCCCGAGGAGACGGAGGAGGAGCTGCGGGAGCACCAGGCACTCCTGGAGGAGCCCTTCCTGGACCGGCTCCCGGGGCAGAAGGAGGCCCATGCGCTGGCTGGGGTGCAGGTGAAGCAGGAGCCCATCGAGAGTGACGACGAGGAGGCGGAGCCCCCACGGGAGGCGGACCCCGGCCAGCGGCTGCCCACGGAGCAGGAGCTGCTCTTCAGACAGCAAGCCCTCCTCCTGGAGCAGCAGCGGATCCACCAGCTGAGGAACTACCAGGCATCCATGGAGGCCGCTGGCATCCCCGTGTCCTTCGGCGGGCACCGGCCCCTATCCCGGGCGCAGTCCTCCCCCGCGTCTGCCACCTTCCCTATGTCCGTGCAGGAGCCCCCAGCCAAGCCGAGGTTTACCACAGGCCTCGTGTACGACACGCTGATGCTGAAGCACCAGTGCACCTGCGGGAACACCAACAGCCACCCGGAGCACGCCGGGCGCATCCAGAGCATCTGGTCGCGGCTGCAGGAGACCGGCCTGCGAGGCAAATGTGAGTGCATCCGTGGACGGAAGGCCACGCTGGAGGAGCTGCAGACGGTGCACTCGGAGACGCACGCCCTGCTCTACGGCACGAACCCCCTCAACAGGCAGAAACTGGACAGTAAGAAACTTCTAGCTGTCCTCCCATCCACCTTCGCTGTGGGGAACTGTGGAGGAGTCGGGGTGGACAGTGATACCATATGGAACGAGGTGCACTCGTCGGGGGCTGCCCGCCTGGCTGTGGGCTGTGTGGTGGAGCTGGTCTTCAAGGTGGCCACGGGGGAGCTGAAGAATGGCTTTGCTGTGGTCCGCCCTCCAGGACACCACGCAGAGGAGAGCACGCCCATGGGGTTCTGCTACTTCAACTCCGTGGCCATCGCTGCCAAGCTTCTCCAGCAAAGGCTGAGCGTGAGCAAGACCCTCGTGGTAGACTGGGACGTGCACCACGGGAACGGGACCCAGCAGGCCTTCTACAGCGACCCCCGAGTGCTCTACATCTCCCTGCACCGCTACGACGACGGCAACTTCTTCCCAGGCAGCGGCGCCCCCGACGAGGCTGTGGGGGCCCTTGCGTTGGGCTTCAACGTCAACATGGCTTTCACCGGCGGCCTGGACCCCCCCATGGGAGACGCAGAGTACCTGGCGGCCTTCAGGACTGTGGTCATGCCGATCGCCAGCGAGTTCGCCCCAGACGTGGTGCTGGTGTCCTCGGGCTTCGACGCTGTGGAGGGCCACCCCACGCCCCTCGGAGGCTACAACCTCTCCGCCAAATGTTTCGGGTACCTGACGAAGCAGCTAATGGGCCTGGCCGGTGGCCGGGTTGTCCTGGCGCTGGAGGGGGGCCACGATCTCACAGCCATCTGCGACGCCTCGGAAGCCTGCGTCTCTGCTCTGCTGGGGAATGAGCTCGATCCTCTCCCAGAAAAGGTCTTACAGCAGAGACCCAACGCCAACGCCGTGCGGTCGATGGAGAAGGTCATTGAAATCCACAGCCAGTACTGGCGCTCCCTGCAGAGGCTCGCCTCCACCGCTGGCTACTCCCTGGTCGAGGCCCAGAAGTGTGAGAACGAGGAAGCCGAGACTGTCACTGCCATGGCCTCGCTGTCTGTGGCCGTGAAGGCCCCTGAGAAGAGACCTGACCCCTCCCCACTCCAAGCCTCCATGCACATG
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |