| Tag |
Content |
| WERAM ID |
WERAM-Cis-0060 |
| Ensembl Protein ID |
ENSCSAVP00000013851.1 |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-II |
1.60e-92 |
310.1 |
1 |
225 |
| HDAC |
Class-I |
6.10e-30 |
104.9 |
31 |
210 |
|
| Organism |
Ciona savignyi |
| Domain Profile |
HDAC Class-II
class-2.txt 104 lavGavlelvdkvlkgelkn.gfavvRPPGHHaeestamGFClfnnvavaakllqqklk..vkkilivDwDvHhGnGtqeifykdpkv 188
+avG++++l+ +v+++++k f +vRPPGHHa+++ am FC+fn+vavaa+ lq++ + v+++li+DwDvHh nGtq+ify+dp+v
ENSCSAVP00000013851.1 1 MAVGCTVDLALEVAQNTIKErRFSLVRPPGHHAQRDLAMAFCFFNSVAVAARKLQRECPnvVRRVLIIDWDVHHCNGTQNIFYDDPSV 88
69****************7659***********************************9999*************************** PP
class-2.txt 189 lylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaeg..dpl 271
l +S+HRyd+g+ffp g+gav+e+g+g+g+g+nvN+ ++ggl mgda+yla+fr +vlpia++F+P++vlvs+Gf aa g ++l
ENSCSAVP00000013851.1 89 LVISVHRYDDGNFFP--GTGAVNECGSGPGMGYNVNIGFSGGLdppMGDADYLAVFRSIVLPIARKFNPHFVLVSCGFSAAGGhpSTL 174
***************..******************************************************************88889 PP
class-2.txt 272 gglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322
gg++vt++c+++lt++l++la+g++vl+lEGG++l+ +++++ea+v++Llg
ENSCSAVP00000013851.1 175 GGYNVTPNCFGYLTRSLSELAEGKIVLALEGGFELEPLCNCAEACVQTLLG 225
*************************************************96 PP
HDAC Class-I
class-1.txt 132 hhakkseasGfcyvnDivlailellk....khkrvlyididlhhGDgveeafyttdrvmtvsfhkyge.effPgtGdlsdvgaekgky 214
hha+++ a fc+ n + +a +l++ +rvl id d+hh +g ++ fy v+ +s+h+y++ +ffPgtG +++ g + g
ENSCSAVP00000013851.1 31 HHAQRDLAMAFCFFNSVAVAARKLQRecpnVVRRVLIIDWDVHHCNGTQNIFYDDPSVLVISVHRYDDgNFFPGTGAVNECGSGPGMG 118
*************************944434679********************************9746****************** PP
class-1.txt 215 yavnvPlkdgid....DesyekifksviskvieafePeavvlqcGaDslagD..rlgefnlsikghaecvkfvksf.nlpllvlGGGG 295
y vn+ ++ g+d D y ++f+s++ ++ + f+P+ v++ cG + g lg +n++ + ++ + + + + ++++ GG
ENSCSAVP00000013851.1 119 YNVNIGFSGGLDppmgDADYLAVFRSIVLPIARKFNPHFVLVSCGFSAAGGHpsTLGGYNVTPNCFGYLTRSLSELaEGKIVLALEGG 206
******99997766669****************************888877522699******9999988888887444444444566 PP
class-1.txt 296 Ytlr 299
+ l+
ENSCSAVP00000013851.1 207 FELE 210
6655 PP
|
Protein Sequence
(Fasta) | MAVGCTVDLA LEVAQNTIKE RRFSLVRPPG HHAQRDLAMA FCFFNSVAVA ARKLQRECPN 60
VVRRVLIIDW DVHHCNGTQN IFYDDPSVLV ISVHRYDDGN FFPGTGAVNE CGSGPGMGYN 120
VNIGFSGGLD PPMGDADYLA VFRSIVLPIA RKFNPHFVLV SCGFSAAGGH PSTLGGYNVT 180
PNCFGYLTRS LSELAEGKIV LALEGGFELE PLCNCAEACV QTLLGKEEYS SLSRDTLERR 240
PSDNAVRAIN GVIAIQEKHW KGLDVSSGEV SHIDYMRMTR ENETCVAMAS LSV 293Protein Fasta Sequence
>ENSCSAVP00000013851.1|Class-I|Ciona savignyi
MAVGCTVDLALEVAQNTIKERRFSLVRPPGHHAQRDLAMAFCFFNSVAVAARKLQRECPNVVRRVLIIDWDVHHCNGTQNIFYDDPSVLVISVHRYDDGNFFPGTGAVNECGSGPGMGYNVNIGFSGGLDPPMGDADYLAVFRSIVLPIARKFNPHFVLVSCGFSAAGGHPSTLGGYNVTPNCFGYLTRSLSELAEGKIVLALEGGFELEPLCNCAEACVQTLLGKEEYSSLSRDTLERRPSDNAVRAINGVIAIQEKHWKGLDVSSGEVSHIDYMRMTRENETCVAMASLSV |
Nucleotide Sequence
(Fasta) | ATGGCGGTTG GTTGCACAGT GGATTTAGCA CTGGAAGTGG CGCAGAATAC GATTAAAGAA 60
CGCAGATTCT CGTTAGTGCG ACCTCCTGGC CACCATGCGC AGAGGGATCT AGCAATGGCG 120
TTCTGTTTCT TCAACTCAGT CGCAGTGGCC GCTCGAAAAC TCCAGCGGGA ATGCCCCAAC 180
GTGGTTCGAC GGGTGCTGAT AATCGACTGG GACGTTCACC ACTGCAACGG AACGCAGAAC 240
ATCTTCTACG ATGACCCGAG TGTGCTCGTG ATATCCGTGC ATCGGTATGA CGATGGAAAC 300
TTCTTTCCCG GCACTGGTGC AGTAAACGAG TGTGGCAGCG GACCCGGTAT GGGGTACAAC 360
GTGAACATCG GGTTCAGTGG GGGGTTGGAT CCCCCGATGG GCGACGCAGA TTACCTCGCC 420
GTGTTCCGAT CCATCGTGCT TCCGATCGCT CGCAAGTTCA ACCCTCATTT CGTCCTCGTG 480
TCATGCGGAT TTTCGGCCGC TGGAGGGCAC CCTTCGACGC TAGGGGGCTA CAATGTCACC 540
CCGAACTGTT TCGGCTACTT GACCCGGTCG CTCTCAGAGC TAGCGGAAGG GAAGATAGTC 600
CTGGCACTAG AGGGCGGGTT CGAATTAGAG CCGCTGTGCA ATTGCGCGGA GGCATGCGTG 660
CAAACGTTGC TTGGGAAGGA AGAATACTCG AGTCTATCGA GAGACACGTT GGAAAGAAGG 720
CCGTCTGATA ACGCGGTCCG AGCTATCAAC GGGGTGATCG CTATCCAAGA GAAACACTGG 780
AAGGGATTGG ACGTTTCATC TGGTGAAGTG TCTCACATCG ACTACATGAG AATGACGCGT 840
GAAAATGAGA CGTGTGTCGC AATGGCGTCA CTTAGTGTCG AGAATAAG
889Nucleotide Fasta Sequence
>ENSCSAVP00000013851.1|Class-I|Ciona savignyi
ATGGCGGTTGGTTGCACAGTGGATTTAGCACTGGAAGTGGCGCAGAATACGATTAAAGAACGCAGATTCTCGTTAGTGCGACCTCCTGGCCACCATGCGCAGAGGGATCTAGCAATGGCGTTCTGTTTCTTCAACTCAGTCGCAGTGGCCGCTCGAAAACTCCAGCGGGAATGCCCCAACGTGGTTCGACGGGTGCTGATAATCGACTGGGACGTTCACCACTGCAACGGAACGCAGAACATCTTCTACGATGACCCGAGTGTGCTCGTGATATCCGTGCATCGGTATGACGATGGAAACTTCTTTCCCGGCACTGGTGCAGTAAACGAGTGTGGCAGCGGACCCGGTATGGGGTACAACGTGAACATCGGGTTCAGTGGGGGGTTGGATCCCCCGATGGGCGACGCAGATTACCTCGCCGTGTTCCGATCCATCGTGCTTCCGATCGCTCGCAAGTTCAACCCTCATTTCGTCCTCGTGTCATGCGGATTTTCGGCCGCTGGAGGGCACCCTTCGACGCTAGGGGGCTACAATGTCACCCCGAACTGTTTCGGCTACTTGACCCGGTCGCTCTCAGAGCTAGCGGAAGGGAAGATAGTCCTGGCACTAGAGGGCGGGTTCGAATTAGAGCCGCTGTGCAATTGCGCGGAGGCATGCGTGCAAACGTTGCTTGGGAAGGAAGAATACTCGAGTCTATCGAGAGACACGTTGGAAAGAAGGCCGTCTGATAACGCGGTCCGAGCTATCAACGGGGTGATCGCTATCCAAGAGAAACACTGGAAGGGATTGGACGTTTCATCTGGTGAAGTGTCTCACATCGACTACATGAGAATGACGCGTGAAAATGAGACGTGTGTCGCAATGGCGTCACTTAGTGTCGAGAATAAG
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
