WERAM Information


Tag Content
WERAM ID WERAM-Tut-0038
Ensembl Protein ID ENSTTRP00000002947.1
Gene Name HDAC4
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSTTRG00000003145.1 ENSTTRT00000003144.1 ENSTTRP00000002947.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 1.40e-152 507.3 102 988
HDAC Class-I 1.60e-29 103.2 109 953
Organism Tursiops truncatus
Domain Profile
  HDAC Class-II

           class-2.txt  43 lekleelka.rkatkeelqlvHseehvelletae.klekeeles 84 
+++ +l++ k+++e l+ H++e++e+ ++ e + +++el++
ENSTTRP00000002947.1 102 RQHEAQLHEhIKQQQELLAVKHQQELLEHQRKLErHRQEQELAK 145
22222233212333333333355555555555444444444443 PP
class-2.txt 3 glvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles....... 84
lvyd+ mlkhq++++n+++hpE+++Riq+i+srlqe+gl++++e++++rkat+eelq+vHse+h l++t+ +l++++l+s
ENSTTRP00000002947.1 649 XLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGRCECIRGRKATLEELQTVHSEAHALLYGTN-PLNRQKLDSkkllgsl 736
69**********************************************************************.**************** PP
class-2.txt 85 ...........ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklkv 162
++vdsd+i++e++s+ aarlavG+v+elv+kv++gelkngfavvRPPGHHaeest+mGFC+fn+vavaakllqq+l+v
ENSTTRP00000002947.1 737 tsvfvrlpcggVGVDSDTIWNEVHSSGAARLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQRLSV 825
***************************************************************************************** PP
class-2.txt 163 kkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafrevvlpi 248
+k l+vDwDvHhGnGtq++fy+dp+vly+SlHRyd+g+ffp gsga+devg+g+g+gfnvN+a++ggl mgdaeylaafr+vv+pi
ENSTTRP00000002947.1 826 TKTLVVDWDVHHGNGTQQAFYSDPSVLYISLHRYDDGNFFP--GSGAPDEVGTGPGVGFNVNMAFTGGLdppMGDAEYLAAFRTVVMPI 912
*****************************************..********************************************** PP
class-2.txt 249 akeFkPdlvlvsaGfDaaeg..dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322
a+eF+Pd+vlvs+GfDa+eg +plgg++++akc+++ltkql++laggr+vl+lEGG++l+ai++a+ea+v+aLlg
ENSTTRP00000002947.1 913 ANEFAPDVVLVSSGFDAVEGhpTPLGGYNLSAKCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLG 988
********************9*****************************************************96 PP

  HDAC Class-I

           class-1.txt  24 pkrlsltheLvlnyglskkleivk..pkkasaeellkfhseeyieflkkvepenae.....elskelkkfn 87 
++++ +eL+ + ++ le + ++ + +el+k ++e+ ++ lk+ e+ +++ e++ +l++f
ENSTTRP00000002947.1 109 HEHIKQQQELLAVKHQQELLEHQRklERHRQEQELAKQQREQKLQQLKHKEKGKESavastEVKMKLQEFV 179
34444455555433333333333311344566778888888888888887777666333333334555555 PP
class-1.txt 103 qlitGasleaakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellk..khkrvlyididlhhGDgveeafyttdrvmt 187
+l G +e + k+ ++e + a+ hha s Gfcy n + +a l++ + + l +d d+hhG+g ++afy v+
ENSTTRP00000002947.1 766 RLAVGCVVELVFKVATGELKngFAVVRPP-GHHAEESTPMGFCYFNSVAVAAKLLQQrlSVTKTLVVDWDVHHGNGTQQAFYSDPSVLY 853
45566666666666665544113444333.4*****************99987776645789*************************** PP
class-1.txt 188 vsfhkyge.effPgtGdlsdvgaekgkyyavnvPlkdgid....DesyekifksviskvieafePeavvlqcGaDslagD..rlgefnl 269
+s+h+y++ +ffPg+G ++vg++ g + vn+ ++ g+d D +y + f++v+ ++ + f P++v++ G D++ g +lg +nl
ENSTTRP00000002947.1 854 ISLHRYDDgNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDppmgDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHptPLGGYNL 942
******9746************************99998766669********************************9963369***** PP
class-1.txt 270 sikghaecvkf 280
s k ++ k
ENSTTRP00000002947.1 943 SAKCFGYLTKQ 953
**999876655 PP

Protein Sequence
(Fasta)
MSSQSHPDGL SGRDQPVELL NPARVNHMPG SVDVASALPL PVAPPAVPMD LRLDHQFPLP 60
ATEPGIREQQ LQQELLALKQ KQQLQRQILI AEFQRQHEQL SRQHEAQLHE HIKQQQELLA 120
VKHQQELLEH QRKLERHRQE QELAKQQREQ KLQQLKHKEK GKESAVASTE VKMKLQEFVL 180
NKKKALAHRN LNHCMSSDPR YWYGXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 240
XXXXXSEPNL KLRSRLKQKV AERRSSPLLR RKDGPVVTAL KKRPLDVTXX XXXXXXXXXX 300
XXXXXXSGNA SGENGIAPAV PSVPTEXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 360
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 420
XXXXXXXXXX XXLGALPLHA QPLVGAERVS PSVHKLRQHR PLGRTQSAPL PQSAQALQHL 480
VVQQQHQQFL EKHKQHLQQP QLHLSKIIPK ASEPARQPES HPEETEEELR EHQALLEEPF 540
LDRPPGPKEA HTLAGVQVKQ EPVESDEDDV APGQRQPTEQ ELLFRQQALL LEQQRVHQLX 600
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXL VYDTLMLKHQ 660
CTCGNTNSHP EHAGRIQSIW SRLQETGLRG RCECIRGRKA TLEELQTVHS EAHALLYGTN 720
PLNRQKLDSK KLLGSLTSVF VRLPCGGVGV DSDTIWNEVH SSGAARLAVG CVVELVFKVA 780
TGELKNGFAV VRPPGHHAEE STPMGFCYFN SVAVAAKLLQ QRLSVTKTLV VDWDVHHGNG 840
TQQAFYSDPS VLYISLHRYD DGNFFPGSGA PDEVGTGPGV GFNVNMAFTG GLDPPMGDAE 900
YLAAFRTVVM PIANEFAPDV VLVSSGFDAV EGHPTPLGGY NLSAKCFGYL TKQLMGLAGG 960
RIVLALEGGH DLTAICDASE ACVSALLGNE LDPLPEKVLQ QRPNANAVRS MEKVIEIHSQ 1020
YWRSLQRLAS TAGYSLVEAQ KCENEEAETV TAMASLSVGV KAPEK 1065
Nucleotide Sequence
(Fasta)
ATGAGCTCCC AAAGCCATCC AGATGGACTT TCTGGCCGAG ACCAGCCGGT GGAGCTGCTC 60
AACCCTGCCC GCGTGAACCA CATGCCCGGC TCGGTGGATG TGGCCTCGGC GCTGCCTTTG 120
CCAGTGGCCC CCCCGGCGGT GCCCATGGAC CTGCGCCTGG ACCACCAGTT TCCGCTGCCC 180
GCGACGGAGC CCGGCATCCG GGAGCAGCAG CTGCAGCAGG AGCTCCTGGC CCTCAAGCAG 240
AAGCAGCAGC TCCAGAGGCA GATCCTCATC GCCGAGTTCC AGAGGCAGCA CGAGCAGCTG 300
TCCCGGCAGC ACGAAGCCCA GCTCCATGAG CACATCAAAC AACAGCAGGA GCTGCTGGCC 360
GTGAAGCACC AGCAGGAGCT GCTGGAGCAT CAGCGGAAGC TGGAGAGACA CCGCCAAGAG 420
CAGGAGCTGG CGAAGCAGCA GCGGGAGCAG AAGCTGCAGC AGCTCAAGCA CAAGGAGAAA 480
GGCAAAGAGA GTGCTGTGGC CAGCACAGAA GTGAAGATGA AGCTGCAGGA GTTTGTCCTC 540
AATAAGAAGA AGGCGCTGGC CCACCGGAAC CTGAACCACT GCATGTCCAG TGACCCTCGC 600
TACTGGTATG GNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 660
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 720
NNNNNNNNNN NNNCATCTGA ACCCAATCTG AAATTACGCT CCAGGCTAAA GCAGAAAGTG 780
GCTGAAAGAC GGAGCAGCCC CCTGTTACGC AGGAAAGATG GGCCAGTGGT CACGGCTCTA 840
AAAAAGCGTC CTTTGGATGT CACAGNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 900
NNNNNNNNNN NNNNNNNNTC CGGGAACGCC AGCGGGGAGA ATGGGATCGC GCCCGCCGTC 960
CCCAGCGTCC CGACTGAGNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1020
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1080
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1140
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1200
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1260
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNGCCTGG GAGCGCTGCC CCTGCACGCG 1320
CAGCCCCTGG TGGGGGCGGA GCGCGTGTCC CCGTCGGTGC ACAAGCTGCG GCAGCACCGC 1380
CCGCTGGGCC GCACGCAGTC GGCGCCGCTG CCCCAGAGCG CGCAGGCACT GCAGCACCTG 1440
GTGGTCCAGC AGCAGCATCA GCAGTTCCTG GAGAAGCACA AGCAGCACTT GCAGCAGCCG 1500
CAGCTGCACC TCAGCAAGAT CATCCCCAAA GCGAGCGAGC CGGCCCGGCA GCCCGAGAGC 1560
CACCCCGAGG AGACCGAGGA GGAGCTGCGC GAGCACCAGG CCCTCCTGGA GGAGCCGTTC 1620
CTGGACCGGC CCCCAGGGCC GAAGGAGGCG CACACGCTGG CCGGGGTGCA GGTGAAGCAG 1680
GAGCCCGTCG AGAGCGATGA GGACGACGTG GCGCCGGGCC AGCGGCAGCC CACCGAGCAG 1740
GAGCTACTGT TCAGACAGCA AGCCCTCCTC CTGGAGCAGC AACGGGTCCA TCAGCTGAGN 1800
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1860
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1920
NNNNNNNNNN NNNNNNNNNN NNNNNGCCTC GTGTACGACA CGCTGATGCT GAAACACCAG 1980
TGCACCTGTG GGAACACCAA CAGCCACCCC GAGCACGCCG GGCGCATCCA GAGCATCTGG 2040
TCCCGGCTGC AGGAGACCGG CCTTCGAGGC AGATGCGAGT GCATCCGCGG ACGCAAGGCC 2100
ACCCTGGAGG AGCTGCAGAC GGTGCACTCA GAGGCGCACG CCCTGCTCTA CGGCACAAAC 2160
CCCCTCAACA GGCAGAAACT GGACAGTAAG AAACTTCTAG GCTCGCTAAC ATCGGTGTTT 2220
GTCAGGCTGC CCTGCGGTGG TGTCGGGGTA GACAGTGACA CCATATGGAA CGAGGTCCAC 2280
TCGTCAGGGG CAGCCCGCCT GGCCGTGGGC TGCGTGGTGG AGCTGGTCTT CAAGGTGGCC 2340
ACAGGGGAAC TGAAGAATGG CTTTGCCGTG GTCCGCCCCC CAGGACACCA TGCGGAGGAG 2400
AGCACGCCCA TGGGGTTCTG CTACTTCAAT TCCGTGGCTG TCGCAGCCAA GCTTCTCCAG 2460
CAGAGGTTGA GTGTGACCAA GACCCTCGTG GTGGACTGGG ACGTGCACCA TGGGAACGGG 2520
ACCCAGCAGG CCTTCTACAG TGACCCCAGC GTGCTGTACA TCTCGCTGCA CCGCTACGAT 2580
GACGGGAACT TCTTCCCGGG CAGCGGGGCA CCTGACGAGG TGGGCACGGG GCCCGGCGTG 2640
GGCTTCAACG TCAACATGGC TTTCACCGGC GGCCTTGACC CCCCCATGGG AGACGCAGAG 2700
TACTTGGCGG CCTTCAGAAC TGTGGTCATG CCGATCGCCA ATGAGTTTGC CCCAGATGTG 2760
GTGCTGGTGT CGTCGGGCTT CGACGCCGTG GAGGGCCACC CCACGCCCCT CGGAGGCTAC 2820
AACCTCTCCG CCAAATGTTT CGGGTACCTG ACGAAGCAGC TGATGGGCTT GGCTGGCGGC 2880
CGGATCGTTC TGGCGCTGGA GGGGGGCCAC GACCTCACAG CCATTTGCGA CGCCTCGGAA 2940
GCCTGCGTCT CTGCTTTGCT GGGAAACGAG CTTGATCCTC TCCCAGAAAA GGTTTTACAG 3000
CAGAGACCCA ATGCGAACGC TGTCCGGTCG ATGGAGAAGG TCATTGAAAT CCACAGCCAG 3060
TACTGGCGCT CCCTGCAGAG GCTCGCCTCC ACCGCCGGCT ACTCTCTGGT TGAGGCCCAG 3120
AAGTGCGAGA ACGAAGAGGC CGAGACTGTC ACTGCCATGG CCTCGCTGTC TGTGGGCGTG 3180
AAGGCCCCCG AGAAG 3196
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bot-0159 ENSBTAP00000023621.5 Bos taurus 87 0.0 1028
WERAM-Fec-0140 ENSFCAP00000013207.3 Felis catus 85 0.0 1014
WERAM-Mup-0001 ENSMPUP00000000123.1 Mustela putorius furo 85 0.0 1005
WERAM-Ict-0095 ENSSTOP00000009983.2 Ictidomys tridecemlineatus 84 0.0 1003
WERAM-Cap-0143 ENSCPOP00000011770.2 Cavia porcellus 84 0.0 1001
WERAM-Hos-0025 ENSP00000264606.3 Homo sapiens 84 0.0 1000
WERAM-Pat-0104 ENSPTRP00000022412.3 Pan troglodytes 84 0.0 999
WERAM-Myl-0159 ENSMLUP00000013297.2 Myotis lucifugus 84 0.0 997
WERAM-Chs-0068 ENSCSAP00000002314.1 Chlorocebus sabaeus 84 0.0 994
WERAM-Aim-0131 ENSAMEP00000011965.1 Ailuropoda melanoleuca 84 0.0 992
WERAM-Paa-0012 ENSPANP00000003104.1 Papio anubis 84 0.0 991
WERAM-Sus-0169 ENSSSCP00000025173.1 Sus scrofa 85 0.0 988
WERAM-Otg-0061 ENSOGAP00000004404.2 Otolemur garnettii 83 0.0 987
WERAM-Caj-0101 ENSCJAP00000017313.2 Callithrix jacchus 84 0.0 983
WERAM-Gog-0157 ENSGGOP00000013985.2 Gorilla gorilla 81 0.0 983
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 82 0.0 968
WERAM-Tag-0050 ENSTGUP00000003338.1 Taeniopygia guttata 82 0.0 965
WERAM-Loa-0107 ENSLAFP00000009167.2 Loxodonta africana 81 0.0 964
WERAM-Gaga-0049 ENSGALP00000033098.3 Gallus gallus 82 0.0 964
WERAM-Fia-0056 ENSFALP00000004005.1 Ficedula albicollis 82 0.0 961
WERAM-Anp-0035 ENSAPLP00000004005.1 Anas platyrhynchos 82 0.0 960
WERAM-Meg-0023 ENSMGAP00000001752.2 Meleagris gallopavo 82 0.0 960
WERAM-Caf-0133 ENSCAFP00000018541.3 Canis familiaris 83 0.0 957
WERAM-Anc-0099 ENSACAP00000009498.3 Anolis carolinensis 80 0.0 948
WERAM-Mum-0077 ENSMUSP00000008995.8 Mus musculus 82 0.0 946
WERAM-Ran-0135 ENSRNOP00000027622.5 Rattus norvegicus 82 0.0 944
WERAM-Pes-0174 ENSPSIP00000020522.1 Pelodiscus sinensis 82 0.0 944
WERAM-Dan-0037 ENSDNOP00000003826.3 Dasypus novemcinctus 81 0.0 934
WERAM-Ova-0200 ENSOARP00000020106.1 Ovis aries 84 0.0 926
WERAM-Poa-0116 ENSPPYP00000014905.2 Pongo abelii 79 0.0 898
WERAM-Lac-0062 ENSLACP00000008432.1 Latimeria chalumnae 76 0.0 897
WERAM-Mam-0041 ENSMMUP00000007984.2 Macaca mulatta 78 0.0 895
WERAM-Xet-0035 ENSXETP00000010592.2 Xenopus tropicalis 75 0.0 869
WERAM-Leo-0082 ENSLOCP00000011105.1 Lepisosteus oculatus 74 0.0 842
WERAM-Dar-0198 ENSDARP00000131327.1 Danio rerio 74 0.0 829
WERAM-Orn-0049 ENSONIP00000005635.1 Oreochromis niloticus 67 0.0 786
WERAM-Asm-0202 ENSAMXP00000018862.1 Astyanax mexicanus 78 0.0 769
WERAM-Xim-0022 ENSXMAP00000002092.1 Xiphophorus maculatus 66 0.0 765
WERAM-Tar-0063 ENSTRUP00000012899.1 Takifugu rubripes 66 0.0 761
WERAM-Pof-0042 ENSPFOP00000003781.2 Poecilia formosa 76 0.0 757
WERAM-Gaa-0020 ENSGACP00000002894.1 Gasterosteus aculeatus 67 0.0 756
WERAM-Ten-0099 ENSTNIP00000000138.1 Tetraodon nigroviridis 84 0.0 739
WERAM-Dio-0038 ENSDORP00000004330.1 Dipodomys ordii 68 0.0 734
WERAM-Orla-0199 ENSORLP00000022663.1 Oryzias latipes 82 0.0 719
WERAM-Pem-0041 ENSPMAP00000005402.1 Petromyzon marinus 66 0.0 691
WERAM-Ptv-0156 ENSPVAP00000012934.1 Pteropus vampyrus 77 0.0 687
WERAM-Gam-0063 ENSGMOP00000006368.1 Gadus morhua 77 0.0 665
WERAM-Mod-0095 ENSMODP00000032765.2 Monodelphis domestica 76 0.0 662
WERAM-Orc-0081 ENSOCUP00000007421.3 Oryctolagus cuniculus 77 0.0 662
WERAM-Ocp-0087 ENSOPRP00000007869.2 Ochotona princeps 77 0.0 660
WERAM-Eqc-0174 ENSECAP00000019543.1 Equus caballus 76 0.0 659
WERAM-Prc-0092 ENSPCAP00000008303.1 Procavia capensis 76 0.0 656
WERAM-Sah-0025 ENSSHAP00000002837.1 Sarcophilus harrisii 72 0.0 647
WERAM-Nol-0183 ENSNLEP00000020216.1 Nomascus leucogenys 72 0.0 647
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 72 0.0 646
WERAM-Mae-0089 ENSMEUP00000008883.1 Macropus eugenii 74 6e-179 625
WERAM-Mim-0022 ENSMICP00000002393.1 Microcebus murinus 74 6e-179 625
WERAM-Ere-0042 ENSEEUP00000003697.1 Erinaceus europaeus 76 5e-176 616
WERAM-Soa-0055 ENSSARP00000005400.1 Sorex araneus 67 3e-166 583
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 72 9e-162 568
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 59 5e-155 546
WERAM-Ect-0082 ENSETEP00000009275.1 Echinops telfairi 61 1e-148 525
WERAM-Tub-0137 ENSTBEP00000014805.1 Tupaia belangeri 71 3e-131 467
WERAM-Cii-0046 ENSCINP00000016829.3 Ciona intestinalis 53 4e-125 446
WERAM-Chh-0086 ENSCHOP00000009630.1 Choloepus hoffmanni 53 4e-124 443
WERAM-Cae-0008 C10E2.3a Caenorhabditis elegans 51 7e-115 412
WERAM-Cis-0060 ENSCSAVP00000013851.1 Ciona savignyi 55 6e-92 336
WERAM-Sem-0010 EFJ19764 Selaginella moellendorffii 44 5e-78 290
WERAM-Brr-0181 Bra035942.1-P Brassica rapa 44 1e-77 289
Created Date 25-Jun-2016