WERAM Information


Tag Content
WERAM ID WERAM-Gog-0157
Ensembl Protein ID ENSGGOP00000013985.2
Gene Name HDAC4
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSGGOG00000014323.2 ENSGGOT00000014388.2 ENSGGOP00000013985.2
ENSGGOG00000014323.2 ENSGGOT00000022886.1 ENSGGOP00000026804.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 6.50e-152 505.8 43 970
HDAC Class-I 1.50e-26 94.1 648 935
Organism Gorilla gorilla
Domain Profile
  HDAC Class-II

           class-2.txt 29 RiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles 84
+q+ l +l++++ +++ +++ + ++e+l H++++ e+++ +++ ++ e ++
ENSGGOP00000013985.2 43 QLQQELLALKQKQQIQRQILIAEFQRQHEQLSRQHEAQLHEHIKPQNQIKNMERQD 98
45566666777777777777888888888899999888888887776554444433 PP
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles...... 84
+glvyd+ mlkhq++++++++hpE+++Riq+i+srlqe+gl++k+e++++rkat+eelq+vHse+h+ l++t+ +l++++l+s
ENSGGOP00000013985.2 629 TGLVYDTLMLKHQCTCGSSSSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHTLLYGTN-PLNRQKLDSkkllgs 716
79***********************************************************************.*************** PP
class-2.txt 85 ............ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklk 161
++vdsd+i++e++s+ aarlavG+v+elv+kv +gelkngfavvRPPGHHaeest+mGFC+fn+vavaakllqq+l+
ENSGGOP00000013985.2 717 lasvfvrlpcggVGVDSDTIWNEVHSAGAARLAVGCVVELVFKVTTGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQRLS 805
***************************************************************************************** PP
class-2.txt 162 vkkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafrevvlp 247
v+kilivDwDvHhGnGtq++fy+dp+vly+SlHRyd+g+ffp + +vg+g+g+gfnvN+a++ggl mgdaeylaafr+vv+p
ENSGGOP00000013985.2 806 VSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFP-GSERPRPQVGTGPGVGFNVNMAFTGGLdppMGDAEYLAAFRTVVMP 893
******************************************.45556779************************************** PP
class-2.txt 248 iakeFkPdlvlvsaGfDaaeg..dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322
ia+eF+Pd+vlvs+GfDa+eg +plgg++++a+c+++ltkql++laggr+vl+lEGG++l+ai++a+ea+v+aLlg
ENSGGOP00000013985.2 894 IASEFAPDVVLVSSGFDAVEGhpTPLGGYNLSARCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLG 970
*********************9*****************************************************96 PP

  HDAC Class-I

           class-1.txt  18 qkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyi.....eflkkvepenae...elskelkkf...nvgedc.Pv 94 
++hp r++ + + + + gl k e ++ +ka+ eel+++hse++ + l++ + ++++ +l++ + + +vg d+ +
ENSGGOP00000013985.2 648 SSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHTllygtNPLNRQKLDSKKllgSLASVFVRLpcgGVGVDSdTI 736
56677777777777777777777777777777777777777777665311111334444444444444222222222112445454235 PP
class-1.txt 95 fdglfey..cqlitGasleaakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellk..khkrvlyididlhhGDgvee 177
+++++ ++l G +e + k++++e + a+ hha s Gfcy n + +a l++ + +++l +d d+hhG+g ++
ENSGGOP00000013985.2 737 WNEVHSAgaARLAVGCVVELVFKVTTGELKngFAVVRPP-GHHAEESTPMGFCYFNSVAVAAKLLQQrlSVSKILIVDWDVHHGNGTQQ 824
555554311456677777777777776655114444444.4*****************99987776645789***************** PP
class-1.txt 178 afyttdrvmtvsfhkyge.effPgtGdls.dvgaekgkyyavnvPlkdgid....DesyekifksviskvieafePeavvlqcGaDsla 260
afy v+ +s+h+y++ +ffPg+ + +vg++ g + vn+ ++ g+d D +y + f++v+ ++ + f P++v++ G D++
ENSGGOP00000013985.2 825 AFYSDPSVLYMSLHRYDDgNFFPGSERPRpQVGTGPGVGFNVNMAFTGGLDppmgDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVE 913
****************9746*****9865489*************99998766669********************************9 PP
class-1.txt 261 gD..rlgefnlsikghaecvkf 280
g +lg +nls + ++ k
ENSGGOP00000013985.2 914 GHptPLGGYNLSARCFGYLTKQ 935
963369******9998876655 PP

Protein Sequence
(Fasta)
MPSTVDVATA LPLQVAPSAV PMDLRLDHQF SLPVAEPALR EQQLQQELLA LKQKQQIQRQ 60
ILIAEFQRQH EQLSRQHEAQ LHEHIKPQNQ IKNMERQDTN IDTQRGSKDR PRSYGKLKKR 120
HKKLKSFVLK KNKEKGKESA VASTEVKMKL QEFVLNKKKA LAHRNLNHCI SSDPRYWYGK 180
TQHSSLDQSS PPQSGVSTSY NHPVLGMYDA KDDFPLRKTA SEPNLKLRSR LKQKVAERRS 240
SPLLRRKDGP VVTALKKRPL DVTDSACSSA PGSGPSSPNN SSGSVSAENG IAPTVPSIPA 300
ETSLAHRLVA REGSAAPLPL YTSPSLPNIT LGLPATGPSA GTAGQQDAER LALPALQQRL 360
SLFPGTHLTP YLSTSPLERD GGAAHSPLLQ HMVLLEQPPA QAPLVTGLGA LPLHAQSLVG 420
ADRVSPSIHK LRQHRPLGRT QSAPLPQNAQ ALQHLVVRDE KRTFVGRRPP PLQQEALLLK 480
KIIPKPSEPA RQPESHPEET EEELREHQAL LDEPYLDRLP GQKEAHAPAG VQVKQEPIES 540
DDEEAEPPRE VEPGQRQPSE QELLFRQQAL LLEQQRIHQL RNYQASMEAA GIPVSFGGHR 600
PLSRAQSSPA SATFPVSVQE PPTKPRFTTG LVYDTLMLKH QCTCGSSSSH PEHAGRIQSI 660
WSRLQETGLR GKCECIRGRK ATLEELQTVH SEAHTLLYGT NPLNRQKLDS KKLLGSLASV 720
FVRLPCGGVG VDSDTIWNEV HSAGAARLAV GCVVELVFKV TTGELKNGFA VVRPPGHHAE 780
ESTPMGFCYF NSVAVAAKLL QQRLSVSKIL IVDWDVHHGN GTQQAFYSDP SVLYMSLHRY 840
DDGNFFPGSE RPRPQVGTGP GVGFNVNMAF TGGLDPPMGD AEYLAAFRTV VMPIASEFAP 900
DVVLVSSGFD AVEGHPTPLG GYNLSARCFG YLTKQLMGLA GGRIVLALEG GHDLTAICDA 960
SEACVSALLG NELDPLPEKV LQQRPNANAV RSMEKVMEIH SKYWRCLQRT ASTAGRSLIE 1020
AQTCENEEAE TVTAMASLSV GVKPAEKRIH RPDEEPMEEE PPL 1063
Nucleotide Sequence
(Fasta)
CCTTGCAGGT TCATCTGCAG AAGCCAGCGG ACGCCTCTGT TCTCCTTGTG GGTTACCTGG 60
CTCATGAGAC CTTGCCAGCG AGGCTCGGCG CTTGAACGTC TGTGACCCAG CCCTCACCGT 120
CCCGGTACTT GTATGTGTTG GTGGGAGTTT GGAGCTCGTT GGAGCTATCG TTTCCGCGGA 180
AATTTTGAGC CATTTCGAAT CACTTAAAGG AGTGGACATT GCTAGCAATG AGCTCCCAAA 240
GCCATCCAGA TGGACTTTCT GGCCGAGACC AGCCAGTGGA GCTGCTGAAT CCTGCCCGCG 300
TGAACCACAT GCCCAGCACG GTGGATGTGG CCACGGCGCT GCCTCTGCAA GTGGCCCCCT 360
CGGCAGTGCC CATGGACCTG CGCCTGGACC ACCAGTTCTC ACTGCCTGTG GCAGAGCCGG 420
CCCTGCGGGA GCAGCAGCTG CAGCAGGAGC TCCTGGCGCT CAAGCAGAAG CAGCAGATCC 480
AGAGGCAGAT CCTCATCGCC GAGTTCCAGA GGCAGCACGA GCAGCTCTCC CGGCAGCACG 540
AGGCGCAGCT CCACGAGCAC ATCAAGCCAC AAAACCAGAT TAAGAATATG GAGAGGCAGG 600
ATACAAACAT AGATACCCAG AGAGGGTCCA AGGACAGGCC ACGAAGCTAT GGCAAGTTGA 660
AGAAGAGACA CAAGAAACTC AAGAGTTTCG TTTTAAAAAA GAACAAGGAG AAGGGCAAAG 720
AGAGTGCCGT GGCCAGCACA GAAGTGAAGA TGAAGTTACA AGAATTTGTC CTCAATAAAA 780
AGAAGGCGCT GGCCCACCGG AATCTGAACC ACTGCATTTC CAGCGACCCT CGCTACTGGT 840
ACGGGAAAAC GCAGCACAGT TCCCTTGACC AGAGTTCTCC ACCCCAGAGC GGAGTGTCGA 900
CCTCCTATAA CCACCCGGTC CTGGGAATGT ACGACGCCAA AGATGACTTC CCTCTTAGGA 960
AAACAGCTTC TGAACCGAAT CTGAAATTAC GGTCCAGGCT AAAGCAGAAA GTGGCCGAAA 1020
GACGGAGCAG CCCCCTGTTA CGCAGGAAAG ACGGGCCAGT GGTCACTGCT CTAAAAAAGC 1080
GTCCGTTGGA TGTCACAGAC TCCGCGTGCA GCAGCGCCCC AGGCTCCGGA CCCAGCTCAC 1140
CCAACAACAG CTCTGGGAGC GTCAGCGCAG AGAACGGTAT CGCGCCCACC GTCCCCAGCA 1200
TCCCGGCGGA GACGAGTTTG GCGCACAGAC TTGTGGCACG AGAAGGCTCG GCCGCTCCAC 1260
TTCCCCTCTA CACGTCGCCA TCCCTGCCCA ACATCACGCT GGGCCTGCCT GCCACCGGCC 1320
CTTCTGCTGG CACGGCGGGC CAGCAGGACG CCGAGAGACT CGCCCTTCCC GCCCTCCAGC 1380
AGAGGCTCTC CCTTTTCCCC GGCACCCACC TCACTCCCTA CCTGAGCACC TCGCCCTTGG 1440
AGCGGGATGG AGGGGCAGCG CACAGCCCTC TTCTGCAGCA CATGGTCTTA CTGGAGCAGC 1500
CGCCGGCACA AGCGCCCCTC GTCACAGGCC TGGGAGCACT GCCCCTCCAC GCACAGTCCT 1560
TGGTTGGTGC AGACCGGGTG TCCCCCTCCA TCCACAAGCT GCGGCAGCAC CGCCCACTGG 1620
GGCGGACCCA GTCGGCCCCG CTGCCCCAGA ACGCCCAGGC TCTGCAGCAC CTGGTCGTAA 1680
GAGATGAGAA GAGGACATTC GTTGGAAGGC GTCCTCCACC CCTACAGCAA GAAGCCTTGC 1740
TTCTCAAGAA AATCATCCCC AAGCCAAGCG AGCCAGCCCG GCAGCCGGAG AGCCACCCGG 1800
AGGAGACGGA GGAGGAGCTC CGTGAGCACC AGGCTCTGCT GGACGAGCCC TACCTGGACC 1860
GGCTGCCGGG GCAGAAGGAG GCGCACGCAC CGGCCGGCGT GCAGGTGAAG CAGGAGCCCA 1920
TTGAGAGCGA TGACGAAGAG GCGGAGCCCC CGCGGGAGGT GGAGCCGGGC CAGCGCCAGC 1980
CCAGTGAGCA GGAGCTGCTC TTCAGACAGC AAGCCCTCCT GCTGGAGCAG CAGCGGATCC 2040
ACCAGCTGAG GAACTACCAG GCGTCCATGG AAGCCGCCGG CATCCCCGTG TCCTTCGGCG 2100
GCCACAGGCC TCTGTCCCGG GCGCAGTCCT CACCCGCATC TGCCACCTTC CCCGTGTCTG 2160
TGCAGGAGCC CCCCACCAAG CCGAGGTTCA CGACAGGCCT CGTGTATGAC ACGCTGATGC 2220
TGAAGCACCA GTGCACCTGC GGGAGCAGCA GCAGCCACCC CGAGCACGCC GGGAGGATCC 2280
AGAGCATCTG GTCCCGCCTG CAGGAGACGG GCCTCCGGGG CAAATGCGAG TGCATCCGCG 2340
GACGCAAGGC CACCCTGGAG GAACTACAGA CGGTGCACTC GGAAGCCCAC ACCCTCCTGT 2400
ATGGCACGAA CCCCCTCAAC CGGCAGAAAC TGGACAGTAA GAAACTTCTA GGCTCGCTCG 2460
CCTCCGTGTT CGTCCGGCTC CCCTGCGGTG GTGTTGGGGT GGACAGTGAC ACCATATGGA 2520
ACGAGGTGCA CTCGGCGGGG GCGGCCCGCC TGGCTGTGGG CTGCGTGGTA GAGCTGGTCT 2580
TCAAGGTGAC CACGGGGGAG CTGAAGAATG GCTTTGCTGT GGTCCGCCCC CCTGGACACC 2640
ACGCGGAGGA GAGCACGCCC ATGGGCTTTT GCTACTTCAA CTCCGTGGCC GTGGCAGCCA 2700
AGCTTCTGCA GCAGAGGTTG AGCGTGAGCA AGATCCTCAT CGTGGACTGG GACGTGCACC 2760
ATGGAAACGG GACCCAGCAG GCTTTCTACA GCGACCCCAG CGTCCTGTAC ATGTCCCTCC 2820
ACCGCTATGA CGATGGGAAC TTCTTCCCAG GCAGCGAGAG ACCCAGGCCA CAGGTGGGCA 2880
CAGGGCCCGG CGTGGGTTTC AACGTCAACA TGGCTTTCAC CGGCGGCCTG GACCCCCCCA 2940
TGGGAGACGC TGAGTACTTG GCAGCCTTCA GAACGGTGGT CATGCCAATC GCCAGCGAGT 3000
TTGCCCCGGA CGTGGTGCTG GTGTCATCAG GCTTCGACGC CGTGGAGGGC CACCCCACCC 3060
CTCTTGGGGG CTACAACCTC TCCGCCAGAT GCTTCGGGTA CCTGACGAAG CAGCTGATGG 3120
GCCTGGCTGG CGGCCGGATC GTCCTGGCCC TCGAGGGAGG CCACGACCTG ACCGCCATTT 3180
GCGACGCCTC GGAAGCATGT GTTTCTGCCT TGCTGGGAAA CGAGCTTGAT CCTCTCCCAG 3240
AAAAGGTTTT ACAGCAAAGA CCCAATGCAA ACGCTGTCCG CTCCATGGAG AAAGTCATGG 3300
AGATCCACAG CAAGTACTGG CGCTGCCTGC AGCGCACAGC CTCCACAGCG GGGCGTTCTC 3360
TGATCGAGGC TCAGACTTGC GAGAACGAAG AAGCCGAGAC GGTCACCGCC ATGGCCTCGC 3420
TGTCCGTGGG CGTGAAGCCC GCCGAAAAGA GGATCCACAG ACCAGATGAG GAGCCCATGG 3480
AAGAGGAGCC GCCCCTGTAG 3501
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Pat-0104 ENSPTRP00000022412.3 Pan troglodytes 94 0.0 1817
WERAM-Hos-0025 ENSP00000264606.3 Homo sapiens 94 0.0 1816
WERAM-Chs-0068 ENSCSAP00000002314.1 Chlorocebus sabaeus 93 0.0 1796
WERAM-Myl-0159 ENSMLUP00000013297.2 Myotis lucifugus 88 0.0 1724
WERAM-Poa-0116 ENSPPYP00000014905.2 Pongo abelii 90 0.0 1723
WERAM-Aim-0131 ENSAMEP00000011965.1 Ailuropoda melanoleuca 88 0.0 1716
WERAM-Mup-0001 ENSMPUP00000000123.1 Mustela putorius furo 87 0.0 1714
WERAM-Bot-0159 ENSBTAP00000023621.5 Bos taurus 87 0.0 1706
WERAM-Mam-0041 ENSMMUP00000007984.2 Macaca mulatta 89 0.0 1701
WERAM-Cap-0143 ENSCPOP00000011770.2 Cavia porcellus 87 0.0 1700
WERAM-Ict-0095 ENSSTOP00000009983.2 Ictidomys tridecemlineatus 88 0.0 1696
WERAM-Fec-0140 ENSFCAP00000013207.3 Felis catus 88 0.0 1682
WERAM-Caf-0133 ENSCAFP00000018541.3 Canis familiaris 88 0.0 1678
WERAM-Sus-0169 ENSSSCP00000025173.1 Sus scrofa 87 0.0 1655
WERAM-Ran-0135 ENSRNOP00000027622.5 Rattus norvegicus 88 0.0 1639
WERAM-Mum-0077 ENSMUSP00000008995.8 Mus musculus 88 0.0 1636
WERAM-Gaga-0049 ENSGALP00000033098.3 Gallus gallus 85 0.0 1634
WERAM-Dan-0037 ENSDNOP00000003826.3 Dasypus novemcinctus 85 0.0 1627
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 85 0.0 1623
WERAM-Tag-0050 ENSTGUP00000003338.1 Taeniopygia guttata 84 0.0 1623
WERAM-Anp-0035 ENSAPLP00000004005.1 Anas platyrhynchos 84 0.0 1620
WERAM-Loa-0107 ENSLAFP00000009167.2 Loxodonta africana 85 0.0 1618
WERAM-Pes-0174 ENSPSIP00000020522.1 Pelodiscus sinensis 85 0.0 1599
WERAM-Otg-0061 ENSOGAP00000004404.2 Otolemur garnettii 83 0.0 1567
WERAM-Anc-0099 ENSACAP00000009498.3 Anolis carolinensis 77 0.0 1527
WERAM-Fia-0056 ENSFALP00000004005.1 Ficedula albicollis 82 0.0 1524
WERAM-Lac-0062 ENSLACP00000008432.1 Latimeria chalumnae 79 0.0 1516
WERAM-Meg-0023 ENSMGAP00000001752.2 Meleagris gallopavo 87 0.0 1513
WERAM-Ova-0200 ENSOARP00000020106.1 Ovis aries 85 0.0 1481
WERAM-Dio-0038 ENSDORP00000004330.1 Dipodomys ordii 77 0.0 1434
WERAM-Leo-0082 ENSLOCP00000011105.1 Lepisosteus oculatus 76 0.0 1425
WERAM-Xet-0035 ENSXETP00000010592.2 Xenopus tropicalis 76 0.0 1422
WERAM-Dar-0198 ENSDARP00000131327.1 Danio rerio 73 0.0 1351
WERAM-Paa-0012 ENSPANP00000003104.1 Papio anubis 95 0.0 1248
WERAM-Orn-0049 ENSONIP00000005635.1 Oreochromis niloticus 70 0.0 1233
WERAM-Caj-0101 ENSCJAP00000017313.2 Callithrix jacchus 95 0.0 1231
WERAM-Tar-0063 ENSTRUP00000012899.1 Takifugu rubripes 68 0.0 1212
WERAM-Xim-0022 ENSXMAP00000002092.1 Xiphophorus maculatus 67 0.0 1196
WERAM-Ten-0103 ENSTNIP00000011743.1 Tetraodon nigroviridis 68 0.0 1196
WERAM-Gaa-0020 ENSGACP00000002894.1 Gasterosteus aculeatus 67 0.0 1194
WERAM-Pof-0029 ENSPFOP00000001978.1 Poecilia formosa 66 0.0 1186
WERAM-Asm-0202 ENSAMXP00000018862.1 Astyanax mexicanus 70 0.0 1181
WERAM-Tut-0038 ENSTTRP00000002947.1 Tursiops truncatus 81 0.0 1010
WERAM-Ptv-0078 ENSPVAP00000007254.1 Pteropus vampyrus 73 0.0 997
WERAM-Sah-0044 ENSSHAP00000005074.1 Sarcophilus harrisii 66 0.0 968
WERAM-Nol-0183 ENSNLEP00000020216.1 Nomascus leucogenys 53 0.0 922
WERAM-Mod-0095 ENSMODP00000032765.2 Monodelphis domestica 56 0.0 920
WERAM-Eqc-0153 ENSECAP00000016533.1 Equus caballus 52 0.0 919
WERAM-Pem-0041 ENSPMAP00000005402.1 Petromyzon marinus 54 0.0 919
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 52 0.0 918
WERAM-Orc-0142 ENSOCUP00000012429.3 Oryctolagus cuniculus 53 0.0 918
WERAM-Mae-0145 ENSMEUP00000015025.1 Macropus eugenii 51 0.0 828
WERAM-Ocp-0153 ENSOPRP00000015747.2 Ochotona princeps 49 0.0 822
WERAM-Ere-0042 ENSEEUP00000003697.1 Erinaceus europaeus 54 0.0 808
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 49 0.0 802
WERAM-Orla-0199 ENSORLP00000022663.1 Oryzias latipes 77 0.0 780
WERAM-Soa-0055 ENSSARP00000005400.1 Sorex araneus 53 0.0 775
WERAM-Gam-0063 ENSGMOP00000006368.1 Gadus morhua 75 0.0 745
WERAM-Prc-0083 ENSPCAP00000007167.1 Procavia capensis 48 0.0 723
WERAM-Mim-0087 ENSMICP00000008193.1 Microcebus murinus 46 0.0 676
WERAM-Ect-0068 ENSETEP00000007698.1 Echinops telfairi 42 2e-162 571
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 57 1e-154 545
WERAM-Tub-0129 ENSTBEP00000014362.1 Tupaia belangeri 51 5e-129 459
WERAM-Chh-0086 ENSCHOP00000009630.1 Choloepus hoffmanni 48 5e-127 453
WERAM-Cii-0046 ENSCINP00000016829.3 Ciona intestinalis 52 8e-127 452
WERAM-Cae-0008 C10E2.3a Caenorhabditis elegans 48 2e-116 417
WERAM-Cis-0060 ENSCSAVP00000013851.1 Ciona savignyi 54 4e-88 323
WERAM-Sem-0010 EFJ19764 Selaginella moellendorffii 42 4e-77 287
WERAM-Brr-0181 Bra035942.1-P Brassica rapa 43 8e-77 286
WERAM-Bro-0168 Bo9g014470.1 Brassica oleracea 42 1e-76 286
Created Date 25-Jun-2016