WERAM Information


Tag Content
WERAM ID WERAM-Fia-0056
Ensembl Protein ID ENSFALP00000004005.1
Gene Name HDAC4
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSFALG00000003839.1 ENSFALT00000004023.1 ENSFALP00000004005.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 1.90e-156 519.9 38 917
HDAC Class-I 6.60e-32 111 55 882
Organism Ficedula albicollis
Domain Profile
  HDAC Class-II

           class-2.txt 33 ilsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeleslt 86
+l + ++++lle+ +l++ + +++el++ H e+ +++l+++ek +++ ++s++
ENSFALP00000004005.1 38 MLAMKHQQELLEHQRKLEQ-HRQEQELEKQHREQKLQQLKNKEKGKESAVASTE 90
2233333344444444433.3344556666666666666666555555554433 PP
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles...... 84
+glvyd+ mlkhq++++n+++hpE+++Riq+i+srlqe+gl++k+e++++rkat+eelq+vHse+h+ l++t+ +l++++l+s
ENSFALP00000004005.1 577 TGLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHTLLYGTN-PLNRQKLDSkkllgs 664
79***********************************************************************.*************** PP
class-2.txt 85 ............ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklk 161
++vdsd+i++e++s+ aarlavG+v+elv+kv++gelkngfavvRPPGHHaeest+mGFC+fn+va+aakllqq+l+
ENSFALP00000004005.1 665 ltsmfvrlpcggVGVDSDTIWNEVHSSGAARLAVGCVIELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLN 753
***************************************************************************************** PP
class-2.txt 162 vkkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafrevvlp 247
v+kilivDwDvHhGnGtq++fy+dp+vly+SlHRyd+g+ffp gsga+devg+g+g+gfnvN+a++ggl mgd+eyl+afr+vv+p
ENSFALP00000004005.1 754 VSKILIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFP--GSGAPDEVGTGAGVGFNVNMAFTGGLdppMGDTEYLTAFRTVVMP 840
******************************************..********************************************* PP
class-2.txt 248 iakeFkPdlvlvsaGfDaaeg..dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322
ia+eF+Pd+vlvs+GfDa+eg +plgg++++akc+++ltkql++laggrvvl+lEGG++l+ai++a+ea+v+aLlg
ENSFALP00000004005.1 841 IANEFAPDVVLVSSGFDAVEGhpTPLGGYNLSAKCFGYLTKQLMGLAGGRVVLALEGGHDLTAICDASEACVSALLG 917
*********************9*****************************************************96 PP

  HDAC Class-I

           class-1.txt  48 pkkasaeellkfhseeyieflkkvepenae.....elskelkkfnv 88 
++ + +el k h+e+ ++ lk+ e+ +++ e++ +l++f +
ENSFALP00000004005.1 55 EQHRQEQELEKQHREQKLQQLKNKEKGKESavastEVKMKLQEFVL 100
3455678999999999999999998887773333333345555555 PP
class-1.txt 18 qkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyi.....eflkkvepenae...elskelkkf...nvgedc.Pv 94
++hp r++ + + + + gl k e ++ +ka+ eel+++hse++ + l++ + ++++ +l++ + + +vg d+ +
ENSFALP00000004005.1 596 NSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHTllygtNPLNRQKLDSKKllgSLTSMFVRLpcgGVGVDSdTI 684
56777777888888888888888888888888888888888888765311111345555555544555333333333222455555235 PP
class-1.txt 95 fdglfey..cqlitGasleaakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellk..khkrvlyididlhhGDgvee 177
+++++ ++l G +e + k+ ++e + a+ G hha s Gfcy n + +a l++ + +++l +d d+hhG+g ++
ENSFALP00000004005.1 685 WNEVHSSgaARLAVGCVIELVFKVATGELKngFAVVRPPG-HHAEESTPMGFCYFNSVAIAAKLLQQrlNVSKILIVDWDVHHGNGTQQ 772
6666653225667788888888888776651145544444.*******************988777644678***************** PP
class-1.txt 178 afyttdrvmtvsfhkyge.effPgtGdlsdvgaekgkyyavnvPlkdgid....DesyekifksviskvieafePeavvlqcGaDslag 261
afy+ v+ +s+h+y++ +ffPg+G ++vg++ g + vn+ ++ g+d D++y + f++v+ ++ + f P++v++ G D++ g
ENSFALP00000004005.1 773 AFYNDPNVLYISLHRYDDgNFFPGSGAPDEVGTGAGVGFNVNMAFTGGLDppmgDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEG 861
****************9746************************99998766669********************************99 PP
class-1.txt 262 D..rlgefnlsikghaecvkf 280
+lg +nls k ++ k
ENSFALP00000004005.1 862 HptPLGGYNLSAKCFGYLTKQ 882
63369*******999876655 PP

Protein Sequence
(Fasta)
MKHCYCQLPA ASALALGRLM VLICSFSLFL SLQQQQEMLA MKHQQELLEH QRKLEQHRQE 60
QELEKQHREQ KLQQLKNKEK GKESAVASTE VKMKLQEFVL NKKKALAHRN LNHCISSDPR 120
FWYGKTQHSS LDQSSPPQSG VSGTYNHPVL GMYDSKDDFP LRKTASEPNL KLRSRLKQKV 180
AERRSSPLLR RKDGPVVTAL KKRPLDVTGT ADSACNSAPG SGPSSPNNSS NNISTENGIA 240
GSVTSIQAET SLAHRLVNRE GSVTQLPLYT SPSLPNITLG LPATGPSSAG QAQQDAERLA 300
IPTLQQRISL FPGTHLTPYL STTTLERDGG TAHNPLLQHM VLLEQPTAQT PLVTDWYLSG 360
LPLHAQPLVG GERVSPSIHK LRQHRPLGRT QSAPLPQNAQ ALQQLVIQQQ HQQFLEKHKQ 420
QFQQQQLHIN KIISKPAEPA RQHESHPEET EEELREHQAL LEEPYGERGQ KEPPGLASVV 480
QVKQEPIESD EEEAEPQQEL EAGQRQAEQE LLFRQQALLL EQQRIHQLRN YQASLEAAGM 540
PVSFGGHRPL SRAQSSPASA TFPMSVQEPP TKPRFTTGLV YDTLMLKHQC TCGNTNSHPE 600
HAGRIQSIWS RLQETGLRGK CECIRGRKAT LEELQTVHSE AHTLLYGTNP LNRQKLDSKK 660
LLGSLTSMFV RLPCGGVGVD SDTIWNEVHS SGAARLAVGC VIELVFKVAT GELKNGFAVV 720
RPPGHHAEES TPMGFCYFNS VAIAAKLLQQ RLNVSKILIV DWDVHHGNGT QQAFYNDPNV 780
LYISLHRYDD GNFFPGSGAP DEVGTGAGVG FNVNMAFTGG LDPPMGDTEY LTAFRTVVMP 840
IANEFAPDVV LVSSGFDAVE GHPTPLGGYN LSAKCFGYLT KQLMGLAGGR VVLALEGGHD 900
LTAICDASEA CVSALLGNEL DPLPEKVFQQ RANANAVHSM EKVIEIHSKY WHSLQRFAST 960
VGYSLVEAQK CENEEAETVT AMASLSVGVK PAEKRPEDEP MEEEPPL 1007
Nucleotide Sequence
(Fasta)
CACGGATTCT CGGCGTGATT TGAGTTAGAT GGGACATTAA ATTCCATCTC GTCCCACCCT 60
CTGCCATGGG CAGGGACACC TCCCACTACC CCAGGTTGCT CCAAGCCCCA TCCACCCTGG 120
CCTAGAACAC TTCCAAGGAT GGGGCAGACA CAAAATCTAC ATTTCTCTGT GCAACAAATA 180
ATATTGAGGG TGCCCTAGTG GGGTTTTATT TAGTATCAGG CGATGGAGAT AAAAGGAGGT 240
CCATGCTTGT CCTTCCTTTC CATGAATGAA GCACTGTTAC TGTCAGCTGC CTGCAGCCTC 300
TGCTTTGGCT CTGGGAAGGC TGATGGTGTT AATCTGCTCC TTTTCCCTGT TCCTTTCTCT 360
GCAGCAGCAG CAGGAGATGC TGGCCATGAA GCATCAGCAG GAGCTGTTGG AGCACCAGAG 420
GAAGCTGGAG CAGCACCGAC AGGAGCAGGA GCTGGAGAAG CAGCACCGAG AGCAGAAACT 480
GCAGCAGCTG AAAAACAAAG AGAAAGGAAA AGAGAGTGCA GTGGCAAGCA CAGAAGTGAA 540
GATGAAATTA CAGGAATTTG TGTTGAACAA GAAGAAGGCT CTGGCCCACC GGAATCTCAA 600
CCACTGCATA TCCAGCGACC CTCGCTTCTG GTACGGGAAG ACCCAGCACA GCTCTCTGGA 660
CCAGAGCTCC CCACCCCAAA GTGGCGTCTC CGGCACCTAC AACCACCCAG TCCTGGGGAT 720
GTACGATTCC AAAGACGACT TCCCGCTCAG AAAAACAGCC TCTGAACCCA ACCTGAAGCT 780
GCGCTCCAGA CTAAAGCAGA AGGTGGCTGA GAGGAGGAGC AGCCCGCTCC TGCGCAGGAA 840
GGACGGGCCC GTGGTGACGG CGCTCAAGAA GCGCCCGCTG GACGTCACAG GCACGGCGGA 900
CTCTGCATGC AACAGTGCTC CTGGATCTGG TCCCAGCTCT CCGAACAACA GTTCCAACAA 960
CATCAGCACC GAGAACGGAA TTGCAGGATC AGTCACGAGT ATCCAGGCAG AGACCAGCCT 1020
GGCTCACAGG CTCGTCAACC GCGAGGGCTC TGTGACCCAG CTGCCGCTCT ACACCTCGCC 1080
CTCCCTGCCC AACATCACGC TAGGACTGCC TGCCACCGGC CCTTCCAGCG CGGGACAAGC 1140
GCAGCAGGAC GCGGAGAGGC TGGCAATCCC AACCTTACAG CAGAGAATCT CCTTATTCCC 1200
TGGCACTCAC CTCACTCCCT ACCTGAGCAC TACAACGTTG GAGAGGGATG GGGGAACTGC 1260
ACACAACCCT CTCCTGCAGC ACATGGTCCT ACTGGAACAG CCAACTGCAC AAACGCCCCT 1320
GGTCACAGAC TGGTATCTTT CAGGACTGCC CCTGCACGCA CAGCCCCTGG TGGGTGGAGA 1380
GAGGGTCTCC CCTTCGATCC ACAAGCTGCG GCAGCACCGC CCGCTCGGGC GCACCCAGTC 1440
TGCTCCCCTG CCCCAGAACG CCCAGGCCCT CCAGCAGCTG GTGATCCAGC AGCAGCACCA 1500
GCAGTTCCTG GAGAAACACA AACAGCAATT CCAGCAGCAG CAGCTGCACA TCAACAAGAT 1560
CATCTCCAAG CCCGCGGAGC CGGCGCGGCA GCACGAGAGC CACCCCGAGG AGACGGAGGA 1620
GGAGCTGCGG GAGCACCAGG CGCTGCTGGA GGAGCCCTAC GGCGAGCGGG GCCAGAAGGA 1680
GCCCCCGGGG CTGGCCAGCG TGGTGCAGGT CAAGCAGGAG CCCATCGAGA GCGACGAGGA 1740
GGAGGCAGAG CCGCAGCAGG AGCTGGAGGC CGGGCAGAGG CAGGCGGAGC AGGAGCTGCT 1800
CTTCCGCCAG CAAGCCCTGC TGCTGGAGCA GCAGCGGATT CACCAGCTGA GGAACTACCA 1860
GGCGTCGCTG GAGGCAGCTG GCATGCCCGT GTCCTTCGGG GGACACCGGC CCCTGTCCCG 1920
GGCACAGTCC TCCCCCGCCT CGGCCACCTT CCCCATGTCC GTGCAGGAGC CACCCACTAA 1980
GCCAAGGTTC ACAACAGGCC TTGTGTACGA CACATTGATG CTGAAGCACC AGTGCACCTG 2040
TGGAAACACC AACAGCCACC CCGAGCATGC GGGCAGGATC CAGAGCATCT GGTCCAGACT 2100
CCAGGAGACA GGGCTACGGG GCAAGTGTGA GTGCATCCGT GGCAGAAAGG CGACGCTGGA 2160
GGAGCTGCAG ACGGTTCACT CGGAAGCCCA CACCCTGCTT TATGGCACTA ACCCTCTGAA 2220
CAGGCAGAAA CTGGACAGCA AGAAGCTTCT AGGTTCCCTA ACGTCGATGT TTGTCAGGCT 2280
GCCTTGCGGT GGTGTTGGGG TTGACAGTGA CACCATTTGG AACGAGGTGC ACTCCTCCGG 2340
CGCCGCTCGC CTGGCTGTGG GCTGTGTCAT TGAGCTGGTG TTCAAAGTGG CCACAGGAGA 2400
ACTGAAGAAT GGATTTGCTG TTGTCCGGCC CCCGGGTCAC CACGCGGAGG AGAGCACGCC 2460
CATGGGTTTC TGCTATTTTA ACTCCGTGGC AATTGCAGCC AAGCTGCTCC AGCAAAGGCT 2520
CAACGTGAGC AAAATCCTCA TCGTGGACTG GGATGTCCAC CATGGGAATG GTACTCAGCA 2580
GGCCTTCTAC AACGATCCCA ACGTCCTTTA TATCTCACTA CATCGCTACG ATGATGGCAA 2640
CTTCTTCCCA GGCAGCGGCG CTCCAGATGA GGTTGGCACA GGAGCAGGAG TTGGTTTCAA 2700
TGTTAACATG GCATTTACTG GTGGCCTGGA TCCGCCCATG GGAGACACAG AATATTTAAC 2760
TGCCTTCAGG ACAGTAGTGA TGCCCATTGC CAACGAGTTT GCCCCAGATG TTGTGCTGGT 2820
GTCATCTGGT TTCGATGCTG TGGAAGGGCA CCCCACACCC CTTGGAGGAT ATAATCTGTC 2880
AGCAAAATGC TTCGGGTACC TGACGAAGCA GCTGATGGGG CTGGCCGGGG GCCGCGTCGT 2940
GCTGGCCCTC GAGGGTGGCC ACGACCTCAC CGCCATCTGC GACGCCTCGG AGGCTTGTGT 3000
GTCTGCCCTG CTGGGAAACG AGCTTGACCC TCTTCCAGAG AAGGTTTTCC AGCAGAGAGC 3060
AAATGCTAAC GCGGTGCATT CCATGGAGAA AGTCATCGAG ATCCACAGCA AGTACTGGCA 3120
TTCCCTGCAG CGTTTCGCCT CCACGGTGGG ATATTCCCTG GTGGAGGCCC AGAAGTGTGA 3180
GAACGAGGAG GCGGAGACAG TGACGGCCAT GGCATCGCTG TCAGTGGGCG TGAAGCCGGC 3240
GGAGAAGAGA CCTGAGGACG AGCCCATGGA AGAGGAGCCT CCCCTGTAG
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Tag-0050 ENSTGUP00000003338.1 Taeniopygia guttata 99 0.0 1702
WERAM-Gaga-0049 ENSGALP00000033098.3 Gallus gallus 98 0.0 1670
WERAM-Anp-0035 ENSAPLP00000004005.1 Anas platyrhynchos 95 0.0 1615
WERAM-Pes-0174 ENSPSIP00000020522.1 Pelodiscus sinensis 94 0.0 1591
WERAM-Meg-0023 ENSMGAP00000001752.2 Meleagris gallopavo 98 0.0 1590
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 93 0.0 1563
WERAM-Mup-0001 ENSMPUP00000000123.1 Mustela putorius furo 90 0.0 1529
WERAM-Chs-0068 ENSCSAP00000002314.1 Chlorocebus sabaeus 89 0.0 1527
WERAM-Fec-0140 ENSFCAP00000013207.3 Felis catus 90 0.0 1526
WERAM-Myl-0159 ENSMLUP00000013297.2 Myotis lucifugus 90 0.0 1526
WERAM-Aim-0131 ENSAMEP00000011965.1 Ailuropoda melanoleuca 90 0.0 1525
WERAM-Pat-0104 ENSPTRP00000022412.3 Pan troglodytes 90 0.0 1519
WERAM-Hos-0025 ENSP00000264606.3 Homo sapiens 90 0.0 1515
WERAM-Bot-0159 ENSBTAP00000023621.5 Bos taurus 89 0.0 1513
WERAM-Sus-0169 ENSSSCP00000025173.1 Sus scrofa 89 0.0 1505
WERAM-Cap-0143 ENSCPOP00000011770.2 Cavia porcellus 88 0.0 1504
WERAM-Ran-0135 ENSRNOP00000027622.5 Rattus norvegicus 90 0.0 1495
WERAM-Mum-0077 ENSMUSP00000008995.8 Mus musculus 90 0.0 1489
WERAM-Ict-0095 ENSSTOP00000009983.2 Ictidomys tridecemlineatus 89 0.0 1484
WERAM-Caf-0133 ENSCAFP00000018541.3 Canis familiaris 90 0.0 1484
WERAM-Anc-0099 ENSACAP00000009498.3 Anolis carolinensis 89 0.0 1476
WERAM-Lac-0062 ENSLACP00000008432.1 Latimeria chalumnae 86 0.0 1453
WERAM-Dan-0037 ENSDNOP00000003826.3 Dasypus novemcinctus 86 0.0 1443
WERAM-Gog-0157 ENSGGOP00000013985.2 Gorilla gorilla 87 0.0 1441
WERAM-Poa-0116 ENSPPYP00000014905.2 Pongo abelii 86 0.0 1418
WERAM-Loa-0107 ENSLAFP00000009167.2 Loxodonta africana 83 0.0 1415
WERAM-Otg-0061 ENSOGAP00000004404.2 Otolemur garnettii 84 0.0 1414
WERAM-Mam-0041 ENSMMUP00000007984.2 Macaca mulatta 85 0.0 1408
WERAM-Leo-0082 ENSLOCP00000011105.1 Lepisosteus oculatus 83 0.0 1398
WERAM-Xet-0035 ENSXETP00000010592.2 Xenopus tropicalis 81 0.0 1326
WERAM-Dar-0198 ENSDARP00000131327.1 Danio rerio 78 0.0 1322
WERAM-Dio-0038 ENSDORP00000004330.1 Dipodomys ordii 78 0.0 1248
WERAM-Xim-0022 ENSXMAP00000002092.1 Xiphophorus maculatus 71 0.0 1175
WERAM-Asm-0146 ENSAMXP00000013789.1 Astyanax mexicanus 70 0.0 1131
WERAM-Tar-0171 ENSTRUP00000035900.1 Takifugu rubripes 72 0.0 1117
WERAM-Orn-0012 ENSONIP00000001222.1 Oreochromis niloticus 73 0.0 1107
WERAM-Ten-0099 ENSTNIP00000000138.1 Tetraodon nigroviridis 70 0.0 1105
WERAM-Paa-0012 ENSPANP00000003104.1 Papio anubis 90 0.0 1045
WERAM-Caj-0101 ENSCJAP00000017313.2 Callithrix jacchus 89 0.0 1035
WERAM-Sah-0044 ENSSHAP00000005074.1 Sarcophilus harrisii 66 0.0 988
WERAM-Ova-0200 ENSOARP00000020106.1 Ovis aries 89 0.0 957
WERAM-Tas-0071 ENSTSYP00000007103.1 Tarsius syrichta 79 0.0 927
WERAM-Tut-0038 ENSTTRP00000002947.1 Tursiops truncatus 82 0.0 922
WERAM-Ptv-0078 ENSPVAP00000007254.1 Pteropus vampyrus 69 0.0 876
WERAM-Nol-0183 ENSNLEP00000020216.1 Nomascus leucogenys 56 0.0 869
WERAM-Eqc-0153 ENSECAP00000016533.1 Equus caballus 56 0.0 868
WERAM-Orc-0142 ENSOCUP00000012429.3 Oryctolagus cuniculus 56 0.0 863
WERAM-Gaa-0020 ENSGACP00000002894.1 Gasterosteus aculeatus 84 0.0 852
WERAM-Pof-0029 ENSPFOP00000001978.1 Poecilia formosa 82 0.0 847
WERAM-Mod-0016 ENSMODP00000001749.3 Monodelphis domestica 55 0.0 839
WERAM-Orla-0199 ENSORLP00000022663.1 Oryzias latipes 80 0.0 795
WERAM-Gam-0063 ENSGMOP00000006368.1 Gadus morhua 77 0.0 766
WERAM-Soa-0055 ENSSARP00000005400.1 Sorex araneus 53 0.0 753
WERAM-Pem-0041 ENSPMAP00000005402.1 Petromyzon marinus 72 0.0 744
WERAM-Mae-0089 ENSMEUP00000008883.1 Macropus eugenii 89 0.0 744
WERAM-Ocp-0087 ENSOPRP00000007869.2 Ochotona princeps 73 0.0 708
WERAM-Prc-0092 ENSPCAP00000008303.1 Procavia capensis 73 0.0 705
WERAM-Mim-0022 ENSMICP00000002393.1 Microcebus murinus 71 0.0 673
WERAM-Ere-0042 ENSEEUP00000003697.1 Erinaceus europaeus 71 0.0 640
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 55 8e-168 588
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 58 1e-157 554
WERAM-Ect-0082 ENSETEP00000009275.1 Echinops telfairi 63 2e-149 527
WERAM-Chh-0086 ENSCHOP00000009630.1 Choloepus hoffmanni 51 8e-134 475
WERAM-Tub-0129 ENSTBEP00000014362.1 Tupaia belangeri 53 1e-132 471
WERAM-Cii-0046 ENSCINP00000016829.3 Ciona intestinalis 52 1e-128 458
WERAM-Cae-0008 C10E2.3a Caenorhabditis elegans 49 6e-119 426
WERAM-Cis-0060 ENSCSAVP00000013851.1 Ciona savignyi 53 2e-87 321
WERAM-Sem-0010 EFJ19764 Selaginella moellendorffii 42 4e-79 294
Created Date 25-Jun-2016