WERAM Information


Tag Content
WERAM ID WERAM-Caj-0101
Ensembl Protein ID ENSCJAP00000017313.2
Gene Name HDAC4
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSCJAG00000009423.2 ENSCJAT00000018312.2 ENSCJAP00000017313.2
ENSCJAG00000009423.2 ENSCJAT00000018314.2 ENSCJAP00000017315.2
ENSCJAG00000009423.2 ENSCJAT00000056011.1 ENSCJAP00000051829.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 1.70e-152 508.4 237 577
HDAC Class-I 8.00e-30 105.6 256 542
Organism Callithrix jacchus
Domain Profile
  HDAC Class-II

           class-2.txt   2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles...... 84 
+glvyd+ mlkhq++++++++hpE+++Riq+i+srlqe+gl++k+e++++rkat+eelq+vHse+h+ l++t+ +l++++l+s
ENSCJAP00000017313.2 237 TGLVYDTLMLKHQCTCGSSSSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHTLLYGTN-PLNRQKLDSkkllgs 324
79***********************************************************************.*************** PP
class-2.txt 85 ............ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklk 161
++vdsd+i++e++s+ aarlavG+v+elv+kv++gelkngfavvRP GHHaeest+mGFC+fn+vavaakllqq+l+
ENSCJAP00000017313.2 325 lasvfvrlpcggVGVDSDTIWNEVHSAGAARLAVGCVVELVFKVATGELKNGFAVVRPLGHHAEESTPMGFCYFNSVAVAAKLLQQRLS 413
***************************************************************************************** PP
class-2.txt 162 vkkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafrevvlp 247
v+kilivDwDvHhGnGtq++fy+dp+vly+SlHRyd+g+ffp gsga+devg+g+g+gfnvN+a++ggl mgdaeylaafr+vv+p
ENSCJAP00000017313.2 414 VSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFP--GSGAPDEVGTGPGVGFNVNMAFTGGLdppMGDAEYLAAFRTVVMP 500
******************************************..********************************************* PP
class-2.txt 248 iakeFkPdlvlvsaGfDaaeg..dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322
ia+eF+Pd+vlvs+GfDa+eg +plgg++++a+c+++ltkql++laggr+vl+lEGG++l+ai++a+ea+v+aLlg
ENSCJAP00000017313.2 501 IASEFAPDVVLVSSGFDAVEGhpTPLGGYNLSARCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLG 577
*********************9*****************************************************96 PP

  HDAC Class-I

           class-1.txt  18 qkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyi.....eflkkvepenae...elskelkkf...nvgedc.Pv 94 
++hp r++ + + + + gl k e ++ +ka+ eel+++hse++ + l++ + ++++ +l++ + + +vg d+ +
ENSCJAP00000017313.2 256 SSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHTllygtNPLNRQKLDSKKllgSLASVFVRLpcgGVGVDSdTI 344
56677777777777777777777777777777777777777777655311111334444444444444222222222111444454235 PP
class-1.txt 95 fdglfey..cqlitGasleaakkLnkkeadiainwaGGl.hhakkseasGfcyvnDivlailellk..khkrvlyididlhhGDgveea 178
+++++ ++l G +e + k+ ++e + + l hha s Gfcy n + +a l++ + +++l +d d+hhG+g ++a
ENSCJAP00000017313.2 345 WNEVHSAgaARLAVGCVVELVFKVATGELKNGFAVVRPLgHHAEESTPMGFCYFNSVAVAAKLLQQrlSVSKILIVDWDVHHGNGTQQA 433
5555543114566777777777777776655444333322*****************99987776645789****************** PP
class-1.txt 179 fyttdrvmtvsfhkyge.effPgtGdlsdvgaekgkyyavnvPlkdgid....DesyekifksviskvieafePeavvlqcGaDslagD 262
fy v+ +s+h+y++ +ffPg+G ++vg++ g + vn+ ++ g+d D +y + f++v+ ++ + f P++v++ G D++ g
ENSCJAP00000017313.2 434 FYSDPSVLYMSLHRYDDgNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDppmgDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGH 522
***************9746************************99998766669********************************996 PP
class-1.txt 263 ..rlgefnlsikghaecvkf 280
+lg +nls + ++ k
ENSCJAP00000017313.2 523 ptPLGGYNLSARCFGYLTKQ 542
3369******9998876655 PP

Protein Sequence
(Fasta)
MVLLEQPPAQ APLVTGLGAL PLHAQSLVGA DRVSPSIHKL RQHRPLGRTQ SAPLPQNAQA 60
LQHLVIQQQH QQFLEKHKQQ FQQQQLHMNK IIPKPSEPAR QPESHPEETE EELREHQALL 120
DEPYLDRLPG KEAHPQGGVQ VKQEPIESDD EEAEPPQEVE PGQRQPSEQE LLFRQQALLL 180
EQQRIHQLRN YQASMEAAGI PVSFGSHRPL SRAQSSPASA TFPVSVQEPP AKPRFTTGLV 240
YDTLMLKHQC TCGSSSSHPE HAGRIQSIWS RLQETGLRGK CECIRGRKAT LEELQTVHSE 300
AHTLLYGTNP LNRQKLDSKK LLGSLASVFV RLPCGGVGVD SDTIWNEVHS AGAARLAVGC 360
VVELVFKVAT GELKNGFAVV RPLGHHAEES TPMGFCYFNS VAVAAKLLQQ RLSVSKILIV 420
DWDVHHGNGT QQAFYSDPSV LYMSLHRYDD GNFFPGSGAP DEVGTGPGVG FNVNMAFTGG 480
LDPPMGDAEY LAAFRTVVMP IASEFAPDVV LVSSGFDAVE GHPTPLGGYN LSARCFGYLT 540
KQLMGLAGGR IVLALEGGHD LTAICDASEA CVSALLGNEL DPLPEKVLQQ RPNANAVRSM 600
EKVMEIHSKY WRCLQRAAST AGRSLIEAQT CENDEAETVT AMASLSVGVK PAEKRPDEEP 660
MEEEPPL 667
Nucleotide Sequence
(Fasta)
ATATGAGGCC AGCTGTGACC CTAGTGCGGG CTGTATTGGG CTGGCCATGG CCCAGGTGCA 60
GTGGGCTGTA TCAGGCCAGC TGTGACTCTA CAGCTTCTGA ACCGAATCTG AAATTACGGT 120
CCAGGCTAAA GCAGAAAGTG GCCGAAAGAC GGAGCAGCCC CCTGTTACGC AGGAAAGACG 180
GGCCAGTGGT CACTGCCCTA AAAAAGCGTC CGTTGGATGT CACAGACTCT GCCTGCAGCA 240
GCGCCCCCGG CTCCGGGCCC AGCTCACCCA ACAACAGCTC CGGCAACGTC AGCGCCGAGA 300
ACGGGATCTC ACCTGCCGTC CCCAGCATCC CGGCGGAGAC GAGTTTGGCG CACCGACTTG 360
TGGCGCGAGA GGGCTCAGCC GCTCCACTTC CCCTGTACAC GTCGCCCTCC CTGCCCAACA 420
TCACGCTGGG CCTGCCTGCC ACCGGCCCTT CTGCTGGCGC GGCAGGCCAG CAGGATGCTG 480
AGAGACTCGC CCTCCCCACC CTCCAGCAGA GGCTCTCCCT TTTCCCGGGC ACCCACCTCA 540
CTCCCTACCT GAGCACCTCG CCCTTGGAGC GGGATGGAGG GGCAGCGCAC AGCCCTCTTC 600
TGCAGCACAT GGTCTTACTG GAGCAGCCCC CGGCACAAGC GCCCCTTGTC ACAGGCCTGG 660
GAGCTCTGCC CCTCCACGCA CAGTCCCTGG TTGGTGCGGA CCGGGTGTCC CCCTCCATCC 720
ACAAGCTGCG GCAGCACCGC CCACTGGGGC GGACCCAGTC AGCCCCGCTG CCCCAGAACG 780
CCCAGGCCCT GCAGCACCTG GTCATCCAAC AGCAGCATCA GCAGTTTCTG GAGAAACATA 840
AGCAGCAGTT CCAGCAGCAG CAACTGCACA TGAACAAGAT CATCCCCAAG CCAAGCGAGC 900
CAGCCCGGCA GCCGGAGAGC CACCCCGAGG AGACGGAGGA GGAACTCCGT GAGCACCAGG 960
CTCTGCTGGA CGAGCCCTAC CTGGACCGGC TGCCGGGGAA GGAGGCGCAC CCACAGGGCG 1020
GTGTGCAGGT GAAGCAGGAG CCCATTGAGA GCGACGATGA AGAGGCGGAG CCCCCGCAGG 1080
AGGTGGAGCC AGGCCAGCGC CAGCCCAGTG AGCAGGAGCT ACTCTTCAGA CAGCAAGCTC 1140
TCCTGCTGGA GCAGCAACGG ATCCACCAGC TGAGGAACTA CCAGGCGTCC ATGGAGGCTG 1200
CCGGCATCCC CGTGTCCTTC GGCAGCCACC GGCCTCTGTC CCGGGCACAG TCCTCACCGG 1260
CATCCGCCAC CTTCCCCGTG TCTGTCCAGG AGCCCCCTGC CAAACCGAGG TTCACGACAG 1320
GCCTTGTGTA CGACACGCTG ATGCTGAAGC ACCAGTGCAC CTGCGGGAGC AGCAGCAGCC 1380
ACCCTGAGCA CGCCGGGAGG ATCCAGAGCA TCTGGTCCCG CCTACAGGAG ACCGGCCTCC 1440
GAGGCAAATG CGAGTGCATC CGCGGACGCA AGGCCACCCT GGAGGAGCTG CAGACCGTGC 1500
ACTCGGAAGC CCACACCCTC CTGTATGGCA CGAACCCCCT CAACCGGCAG AAACTGGACA 1560
GTAAGAAACT TCTAGGCTCG CTGGCCTCCG TGTTCGTCCG GCTCCCCTGC GGTGGTGTTG 1620
GGGTGGACAG TGACACCATC TGGAATGAGG TGCACTCAGC AGGGGCCGCC CGCCTGGCCG 1680
TGGGCTGCGT GGTGGAGCTG GTCTTCAAGG TGGCCACAGG AGAACTGAAG AACGGCTTTG 1740
CTGTGGTCCG CCCCCTTGGA CACCACGCGG AGGAGAGCAC GCCCATGGGT TTTTGCTACT 1800
TCAACTCCGT GGCTGTGGCA GCCAAGCTTC TGCAGCAGAG GTTGAGTGTG AGCAAGATCC 1860
TCATCGTGGA CTGGGACGTG CACCACGGAA ACGGGACCCA GCAAGCTTTC TACAGCGACC 1920
CCAGCGTCCT GTACATGTCC CTCCACCGCT ACGATGACGG GAACTTCTTC CCAGGCAGCG 1980
GGGCTCCTGA TGAGGTGGGC ACAGGGCCAG GTGTGGGTTT CAACGTCAAC ATGGCTTTCA 2040
CTGGCGGCCT GGACCCCCCC ATGGGAGACG CCGAGTACTT GGCAGCCTTC AGAACGGTGG 2100
TCATGCCCAT CGCCAGTGAG TTTGCCCCGG ACGTGGTGCT GGTGTCGTCA GGCTTCGACG 2160
CCGTGGAGGG CCACCCCACG CCTCTCGGGG GCTACAACCT CTCCGCCAGA TGTTTTGGGT 2220
ACCTGACGAA GCAGCTGATG GGCCTGGCTG GTGGCCGGAT TGTCCTGGCC CTTGAGGGAG 2280
GCCACGACCT GACCGCCATC TGCGACGCCT CCGAAGCATG CGTTTCTGCT TTGCTGGGAA 2340
ATGAGCTTGA TCCCCTTCCG GAAAAGGTTT TACAGCAAAG ACCCAATGCC AATGCTGTCC 2400
GCTCCATGGA GAAGGTCATG GAAATCCACA GCAAGTACTG GCGCTGCCTA CAACGTGCAG 2460
CCTCCACGGC GGGGCGCTCT CTGATCGAGG CTCAGACTTG CGAGAACGAC GAGGCCGAGA 2520
CGGTCACCGC CATGGCCTCA CTGTCAGTGG GCGTGAAGCC CGCCGAAAAG AGACCAGACG 2580
AGGAGCCCAT GGAAGAGGAG CCGCCCCTGT AGCGCCCCTC GAAGCTGCTG TTCTCTTGTC 2640
TGTCTGTCTG TCCTGAAGCT CAGCCAAGAA ACTTTCCCGT GTCACGCCTG CGTCCCACC 2700
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Pat-0104 ENSPTRP00000022412.3 Pan troglodytes 98 0.0 1219
WERAM-Hos-0025 ENSP00000264606.3 Homo sapiens 98 0.0 1219
WERAM-Paa-0012 ENSPANP00000003104.1 Papio anubis 98 0.0 1213
WERAM-Chs-0068 ENSCSAP00000002314.1 Chlorocebus sabaeus 97 0.0 1212
WERAM-Gog-0157 ENSGGOP00000013985.2 Gorilla gorilla 95 0.0 1197
WERAM-Fec-0140 ENSFCAP00000013207.3 Felis catus 93 0.0 1165
WERAM-Ict-0095 ENSSTOP00000009983.2 Ictidomys tridecemlineatus 93 0.0 1161
WERAM-Myl-0159 ENSMLUP00000013297.2 Myotis lucifugus 93 0.0 1159
WERAM-Otg-0061 ENSOGAP00000004404.2 Otolemur garnettii 93 0.0 1159
WERAM-Bot-0159 ENSBTAP00000023621.5 Bos taurus 92 0.0 1155
WERAM-Cap-0143 ENSCPOP00000011770.2 Cavia porcellus 92 0.0 1149
WERAM-Aim-0131 ENSAMEP00000011965.1 Ailuropoda melanoleuca 92 0.0 1149
WERAM-Mup-0001 ENSMPUP00000000123.1 Mustela putorius furo 92 0.0 1148
WERAM-Sus-0169 ENSSSCP00000025173.1 Sus scrofa 92 0.0 1117
WERAM-Poa-0116 ENSPPYP00000014905.2 Pongo abelii 93 0.0 1117
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 90 0.0 1115
WERAM-Mam-0041 ENSMMUP00000007984.2 Macaca mulatta 92 0.0 1113
WERAM-Gaga-0049 ENSGALP00000033098.3 Gallus gallus 89 0.0 1111
WERAM-Mum-0077 ENSMUSP00000008995.8 Mus musculus 92 0.0 1111
WERAM-Meg-0023 ENSMGAP00000001752.2 Meleagris gallopavo 89 0.0 1108
WERAM-Caf-0133 ENSCAFP00000018541.3 Canis familiaris 92 0.0 1107
WERAM-Ran-0135 ENSRNOP00000027622.5 Rattus norvegicus 91 0.0 1106
WERAM-Anp-0035 ENSAPLP00000004005.1 Anas platyrhynchos 89 0.0 1106
WERAM-Tag-0050 ENSTGUP00000003338.1 Taeniopygia guttata 89 0.0 1104
WERAM-Fia-0056 ENSFALP00000004005.1 Ficedula albicollis 89 0.0 1101
WERAM-Loa-0107 ENSLAFP00000009167.2 Loxodonta africana 87 0.0 1093
WERAM-Anc-0099 ENSACAP00000009498.3 Anolis carolinensis 87 0.0 1085
WERAM-Pes-0174 ENSPSIP00000020522.1 Pelodiscus sinensis 89 0.0 1084
WERAM-Dan-0037 ENSDNOP00000003826.3 Dasypus novemcinctus 89 0.0 1077
WERAM-Ova-0200 ENSOARP00000020106.1 Ovis aries 82 0.0 1044
WERAM-Lac-0062 ENSLACP00000008432.1 Latimeria chalumnae 84 0.0 1036
WERAM-Xet-0035 ENSXETP00000010592.2 Xenopus tropicalis 82 0.0 1003
WERAM-Tut-0038 ENSTTRP00000002947.1 Tursiops truncatus 84 0.0 993
WERAM-Leo-0082 ENSLOCP00000011105.1 Lepisosteus oculatus 81 0.0 973
WERAM-Dar-0198 ENSDARP00000131327.1 Danio rerio 80 0.0 951
WERAM-Asm-0202 ENSAMXP00000018862.1 Astyanax mexicanus 73 0.0 906
WERAM-Dio-0038 ENSDORP00000004330.1 Dipodomys ordii 76 0.0 882
WERAM-Orn-0049 ENSONIP00000005635.1 Oreochromis niloticus 71 0.0 875
WERAM-Tar-0171 ENSTRUP00000035900.1 Takifugu rubripes 73 0.0 874
WERAM-Xim-0022 ENSXMAP00000002092.1 Xiphophorus maculatus 71 0.0 865
WERAM-Pof-0029 ENSPFOP00000001978.1 Poecilia formosa 69 0.0 857
WERAM-Gaa-0020 ENSGACP00000002894.1 Gasterosteus aculeatus 72 0.0 856
WERAM-Ten-0099 ENSTNIP00000000138.1 Tetraodon nigroviridis 71 0.0 856
WERAM-Orla-0199 ENSORLP00000022663.1 Oryzias latipes 78 0.0 782
WERAM-Gam-0063 ENSGMOP00000006368.1 Gadus morhua 73 0.0 747
WERAM-Pem-0041 ENSPMAP00000005402.1 Petromyzon marinus 69 0.0 741
WERAM-Mae-0089 ENSMEUP00000008883.1 Macropus eugenii 86 0.0 739
WERAM-Tas-0071 ENSTSYP00000007103.1 Tarsius syrichta 89 0.0 718
WERAM-Nol-0183 ENSNLEP00000020216.1 Nomascus leucogenys 59 0.0 709
WERAM-Eqc-0153 ENSECAP00000016533.1 Equus caballus 59 0.0 708
WERAM-Orc-0142 ENSOCUP00000012429.3 Oryctolagus cuniculus 59 0.0 706
WERAM-Mod-0016 ENSMODP00000001749.3 Monodelphis domestica 59 0.0 702
WERAM-Ocp-0087 ENSOPRP00000007869.2 Ochotona princeps 71 0.0 691
WERAM-Sah-0025 ENSSHAP00000002837.1 Sarcophilus harrisii 56 0.0 679
WERAM-Ptv-0078 ENSPVAP00000007254.1 Pteropus vampyrus 69 0.0 674
WERAM-Mim-0022 ENSMICP00000002393.1 Microcebus murinus 69 0.0 654
WERAM-Soa-0055 ENSSARP00000005400.1 Sorex araneus 56 0.0 645
WERAM-Prc-0083 ENSPCAP00000007167.1 Procavia capensis 65 0.0 645
WERAM-Ere-0042 ENSEEUP00000003697.1 Erinaceus europaeus 66 0.0 639
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 54 4e-173 605
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 58 1e-156 550
WERAM-Ect-0082 ENSETEP00000009275.1 Echinops telfairi 62 8e-148 521
WERAM-Tub-0129 ENSTBEP00000014362.1 Tupaia belangeri 52 1e-130 464
WERAM-Chh-0086 ENSCHOP00000009630.1 Choloepus hoffmanni 49 2e-130 464
WERAM-Cii-0046 ENSCINP00000016829.3 Ciona intestinalis 52 1e-128 458
WERAM-Cae-0008 C10E2.3a Caenorhabditis elegans 51 2e-117 420
WERAM-Cis-0060 ENSCSAVP00000013851.1 Ciona savignyi 55 2e-90 330
WERAM-Sem-0010 EFJ19764 Selaginella moellendorffii 42 1e-77 288
WERAM-Brr-0181 Bra035942.1-P Brassica rapa 42 7e-77 285
WERAM-Bro-0168 Bo9g014470.1 Brassica oleracea 42 7e-77 285
WERAM-Miv-0034 MVLG_04888T0 Microbotryum violaceum 40 2e-76 284
WERAM-Php-0085 PP1S34_252V6.1 Physcomitrella patens 44 4e-75 280
Created Date 25-Jun-2016