Tag |
Content |
WERAM ID |
WERAM-Caj-0101 |
Ensembl Protein ID |
ENSCJAP00000017313.2 |
Gene Name |
HDAC4 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
1.70e-152 |
508.4 |
237 |
577 |
HDAC |
Class-I |
8.00e-30 |
105.6 |
256 |
542 |
|
Organism |
Callithrix jacchus |
Domain Profile |
HDAC Class-II
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles...... 84 +glvyd+ mlkhq++++++++hpE+++Riq+i+srlqe+gl++k+e++++rkat+eelq+vHse+h+ l++t+ +l++++l+s ENSCJAP00000017313.2 237 TGLVYDTLMLKHQCTCGSSSSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHTLLYGTN-PLNRQKLDSkkllgs 324 79***********************************************************************.*************** PP class-2.txt 85 ............ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklk 161 ++vdsd+i++e++s+ aarlavG+v+elv+kv++gelkngfavvRP GHHaeest+mGFC+fn+vavaakllqq+l+ ENSCJAP00000017313.2 325 lasvfvrlpcggVGVDSDTIWNEVHSAGAARLAVGCVVELVFKVATGELKNGFAVVRPLGHHAEESTPMGFCYFNSVAVAAKLLQQRLS 413 ***************************************************************************************** PP class-2.txt 162 vkkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafrevvlp 247 v+kilivDwDvHhGnGtq++fy+dp+vly+SlHRyd+g+ffp gsga+devg+g+g+gfnvN+a++ggl mgdaeylaafr+vv+p ENSCJAP00000017313.2 414 VSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFP--GSGAPDEVGTGPGVGFNVNMAFTGGLdppMGDAEYLAAFRTVVMP 500 ******************************************..********************************************* PP class-2.txt 248 iakeFkPdlvlvsaGfDaaeg..dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322 ia+eF+Pd+vlvs+GfDa+eg +plgg++++a+c+++ltkql++laggr+vl+lEGG++l+ai++a+ea+v+aLlg ENSCJAP00000017313.2 501 IASEFAPDVVLVSSGFDAVEGhpTPLGGYNLSARCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLG 577 *********************9*****************************************************96 PP
HDAC Class-I
class-1.txt 18 qkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyi.....eflkkvepenae...elskelkkf...nvgedc.Pv 94 ++hp r++ + + + + gl k e ++ +ka+ eel+++hse++ + l++ + ++++ +l++ + + +vg d+ + ENSCJAP00000017313.2 256 SSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHTllygtNPLNRQKLDSKKllgSLASVFVRLpcgGVGVDSdTI 344 56677777777777777777777777777777777777777777655311111334444444444444222222222111444454235 PP class-1.txt 95 fdglfey..cqlitGasleaakkLnkkeadiainwaGGl.hhakkseasGfcyvnDivlailellk..khkrvlyididlhhGDgveea 178 +++++ ++l G +e + k+ ++e + + l hha s Gfcy n + +a l++ + +++l +d d+hhG+g ++a ENSCJAP00000017313.2 345 WNEVHSAgaARLAVGCVVELVFKVATGELKNGFAVVRPLgHHAEESTPMGFCYFNSVAVAAKLLQQrlSVSKILIVDWDVHHGNGTQQA 433 5555543114566777777777777776655444333322*****************99987776645789****************** PP class-1.txt 179 fyttdrvmtvsfhkyge.effPgtGdlsdvgaekgkyyavnvPlkdgid....DesyekifksviskvieafePeavvlqcGaDslagD 262 fy v+ +s+h+y++ +ffPg+G ++vg++ g + vn+ ++ g+d D +y + f++v+ ++ + f P++v++ G D++ g ENSCJAP00000017313.2 434 FYSDPSVLYMSLHRYDDgNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDppmgDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGH 522 ***************9746************************99998766669********************************996 PP class-1.txt 263 ..rlgefnlsikghaecvkf 280 +lg +nls + ++ k ENSCJAP00000017313.2 523 ptPLGGYNLSARCFGYLTKQ 542 3369******9998876655 PP
|
Protein Sequence (Fasta) | MVLLEQPPAQ APLVTGLGAL PLHAQSLVGA DRVSPSIHKL RQHRPLGRTQ SAPLPQNAQA 60 LQHLVIQQQH QQFLEKHKQQ FQQQQLHMNK IIPKPSEPAR QPESHPEETE EELREHQALL 120 DEPYLDRLPG KEAHPQGGVQ VKQEPIESDD EEAEPPQEVE PGQRQPSEQE LLFRQQALLL 180 EQQRIHQLRN YQASMEAAGI PVSFGSHRPL SRAQSSPASA TFPVSVQEPP AKPRFTTGLV 240 YDTLMLKHQC TCGSSSSHPE HAGRIQSIWS RLQETGLRGK CECIRGRKAT LEELQTVHSE 300 AHTLLYGTNP LNRQKLDSKK LLGSLASVFV RLPCGGVGVD SDTIWNEVHS AGAARLAVGC 360 VVELVFKVAT GELKNGFAVV RPLGHHAEES TPMGFCYFNS VAVAAKLLQQ RLSVSKILIV 420 DWDVHHGNGT QQAFYSDPSV LYMSLHRYDD GNFFPGSGAP DEVGTGPGVG FNVNMAFTGG 480 LDPPMGDAEY LAAFRTVVMP IASEFAPDVV LVSSGFDAVE GHPTPLGGYN LSARCFGYLT 540 KQLMGLAGGR IVLALEGGHD LTAICDASEA CVSALLGNEL DPLPEKVLQQ RPNANAVRSM 600 EKVMEIHSKY WRCLQRAAST AGRSLIEAQT CENDEAETVT AMASLSVGVK PAEKRPDEEP 660 MEEEPPL 667Protein Fasta Sequence
>ENSCJAP00000017313.2|Class-I|Callithrix jacchus MVLLEQPPAQAPLVTGLGALPLHAQSLVGADRVSPSIHKLRQHRPLGRTQSAPLPQNAQALQHLVIQQQHQQFLEKHKQQFQQQQLHMNKIIPKPSEPARQPESHPEETEEELREHQALLDEPYLDRLPGKEAHPQGGVQVKQEPIESDDEEAEPPQEVEPGQRQPSEQELLFRQQALLLEQQRIHQLRNYQASMEAAGIPVSFGSHRPLSRAQSSPASATFPVSVQEPPAKPRFTTGLVYDTLMLKHQCTCGSSSSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHTLLYGTNPLNRQKLDSKKLLGSLASVFVRLPCGGVGVDSDTIWNEVHSAGAARLAVGCVVELVFKVATGELKNGFAVVRPLGHHAEESTPMGFCYFNSVAVAAKLLQQRLSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGYNLSARCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVLQQRPNANAVRSMEKVMEIHSKYWRCLQRAASTAGRSLIEAQTCENDEAETVTAMASLSVGVKPAEKRPDEEPMEEEPPL
|
Nucleotide Sequence (Fasta) | ATATGAGGCC AGCTGTGACC CTAGTGCGGG CTGTATTGGG CTGGCCATGG CCCAGGTGCA 60 GTGGGCTGTA TCAGGCCAGC TGTGACTCTA CAGCTTCTGA ACCGAATCTG AAATTACGGT 120 CCAGGCTAAA GCAGAAAGTG GCCGAAAGAC GGAGCAGCCC CCTGTTACGC AGGAAAGACG 180 GGCCAGTGGT CACTGCCCTA AAAAAGCGTC CGTTGGATGT CACAGACTCT GCCTGCAGCA 240 GCGCCCCCGG CTCCGGGCCC AGCTCACCCA ACAACAGCTC CGGCAACGTC AGCGCCGAGA 300 ACGGGATCTC ACCTGCCGTC CCCAGCATCC CGGCGGAGAC GAGTTTGGCG CACCGACTTG 360 TGGCGCGAGA GGGCTCAGCC GCTCCACTTC CCCTGTACAC GTCGCCCTCC CTGCCCAACA 420 TCACGCTGGG CCTGCCTGCC ACCGGCCCTT CTGCTGGCGC GGCAGGCCAG CAGGATGCTG 480 AGAGACTCGC CCTCCCCACC CTCCAGCAGA GGCTCTCCCT TTTCCCGGGC ACCCACCTCA 540 CTCCCTACCT GAGCACCTCG CCCTTGGAGC GGGATGGAGG GGCAGCGCAC AGCCCTCTTC 600 TGCAGCACAT GGTCTTACTG GAGCAGCCCC CGGCACAAGC GCCCCTTGTC ACAGGCCTGG 660 GAGCTCTGCC CCTCCACGCA CAGTCCCTGG TTGGTGCGGA CCGGGTGTCC CCCTCCATCC 720 ACAAGCTGCG GCAGCACCGC CCACTGGGGC GGACCCAGTC AGCCCCGCTG CCCCAGAACG 780 CCCAGGCCCT GCAGCACCTG GTCATCCAAC AGCAGCATCA GCAGTTTCTG GAGAAACATA 840 AGCAGCAGTT CCAGCAGCAG CAACTGCACA TGAACAAGAT CATCCCCAAG CCAAGCGAGC 900 CAGCCCGGCA GCCGGAGAGC CACCCCGAGG AGACGGAGGA GGAACTCCGT GAGCACCAGG 960 CTCTGCTGGA CGAGCCCTAC CTGGACCGGC TGCCGGGGAA GGAGGCGCAC CCACAGGGCG 1020 GTGTGCAGGT GAAGCAGGAG CCCATTGAGA GCGACGATGA AGAGGCGGAG CCCCCGCAGG 1080 AGGTGGAGCC AGGCCAGCGC CAGCCCAGTG AGCAGGAGCT ACTCTTCAGA CAGCAAGCTC 1140 TCCTGCTGGA GCAGCAACGG ATCCACCAGC TGAGGAACTA CCAGGCGTCC ATGGAGGCTG 1200 CCGGCATCCC CGTGTCCTTC GGCAGCCACC GGCCTCTGTC CCGGGCACAG TCCTCACCGG 1260 CATCCGCCAC CTTCCCCGTG TCTGTCCAGG AGCCCCCTGC CAAACCGAGG TTCACGACAG 1320 GCCTTGTGTA CGACACGCTG ATGCTGAAGC ACCAGTGCAC CTGCGGGAGC AGCAGCAGCC 1380 ACCCTGAGCA CGCCGGGAGG ATCCAGAGCA TCTGGTCCCG CCTACAGGAG ACCGGCCTCC 1440 GAGGCAAATG CGAGTGCATC CGCGGACGCA AGGCCACCCT GGAGGAGCTG CAGACCGTGC 1500 ACTCGGAAGC CCACACCCTC CTGTATGGCA CGAACCCCCT CAACCGGCAG AAACTGGACA 1560 GTAAGAAACT TCTAGGCTCG CTGGCCTCCG TGTTCGTCCG GCTCCCCTGC GGTGGTGTTG 1620 GGGTGGACAG TGACACCATC TGGAATGAGG TGCACTCAGC AGGGGCCGCC CGCCTGGCCG 1680 TGGGCTGCGT GGTGGAGCTG GTCTTCAAGG TGGCCACAGG AGAACTGAAG AACGGCTTTG 1740 CTGTGGTCCG CCCCCTTGGA CACCACGCGG AGGAGAGCAC GCCCATGGGT TTTTGCTACT 1800 TCAACTCCGT GGCTGTGGCA GCCAAGCTTC TGCAGCAGAG GTTGAGTGTG AGCAAGATCC 1860 TCATCGTGGA CTGGGACGTG CACCACGGAA ACGGGACCCA GCAAGCTTTC TACAGCGACC 1920 CCAGCGTCCT GTACATGTCC CTCCACCGCT ACGATGACGG GAACTTCTTC CCAGGCAGCG 1980 GGGCTCCTGA TGAGGTGGGC ACAGGGCCAG GTGTGGGTTT CAACGTCAAC ATGGCTTTCA 2040 CTGGCGGCCT GGACCCCCCC ATGGGAGACG CCGAGTACTT GGCAGCCTTC AGAACGGTGG 2100 TCATGCCCAT CGCCAGTGAG TTTGCCCCGG ACGTGGTGCT GGTGTCGTCA GGCTTCGACG 2160 CCGTGGAGGG CCACCCCACG CCTCTCGGGG GCTACAACCT CTCCGCCAGA TGTTTTGGGT 2220 ACCTGACGAA GCAGCTGATG GGCCTGGCTG GTGGCCGGAT TGTCCTGGCC CTTGAGGGAG 2280 GCCACGACCT GACCGCCATC TGCGACGCCT CCGAAGCATG CGTTTCTGCT TTGCTGGGAA 2340 ATGAGCTTGA TCCCCTTCCG GAAAAGGTTT TACAGCAAAG ACCCAATGCC AATGCTGTCC 2400 GCTCCATGGA GAAGGTCATG GAAATCCACA GCAAGTACTG GCGCTGCCTA CAACGTGCAG 2460 CCTCCACGGC GGGGCGCTCT CTGATCGAGG CTCAGACTTG CGAGAACGAC GAGGCCGAGA 2520 CGGTCACCGC CATGGCCTCA CTGTCAGTGG GCGTGAAGCC CGCCGAAAAG AGACCAGACG 2580 AGGAGCCCAT GGAAGAGGAG CCGCCCCTGT AGCGCCCCTC GAAGCTGCTG TTCTCTTGTC 2640 TGTCTGTCTG TCCTGAAGCT CAGCCAAGAA ACTTTCCCGT GTCACGCCTG CGTCCCACC
2700 Nucleotide Fasta Sequence
>ENSCJAP00000017313.2|Class-I|Callithrix jacchus ATATGAGGCCAGCTGTGACCCTAGTGCGGGCTGTATTGGGCTGGCCATGGCCCAGGTGCAGTGGGCTGTATCAGGCCAGCTGTGACTCTACAGCTTCTGAACCGAATCTGAAATTACGGTCCAGGCTAAAGCAGAAAGTGGCCGAAAGACGGAGCAGCCCCCTGTTACGCAGGAAAGACGGGCCAGTGGTCACTGCCCTAAAAAAGCGTCCGTTGGATGTCACAGACTCTGCCTGCAGCAGCGCCCCCGGCTCCGGGCCCAGCTCACCCAACAACAGCTCCGGCAACGTCAGCGCCGAGAACGGGATCTCACCTGCCGTCCCCAGCATCCCGGCGGAGACGAGTTTGGCGCACCGACTTGTGGCGCGAGAGGGCTCAGCCGCTCCACTTCCCCTGTACACGTCGCCCTCCCTGCCCAACATCACGCTGGGCCTGCCTGCCACCGGCCCTTCTGCTGGCGCGGCAGGCCAGCAGGATGCTGAGAGACTCGCCCTCCCCACCCTCCAGCAGAGGCTCTCCCTTTTCCCGGGCACCCACCTCACTCCCTACCTGAGCACCTCGCCCTTGGAGCGGGATGGAGGGGCAGCGCACAGCCCTCTTCTGCAGCACATGGTCTTACTGGAGCAGCCCCCGGCACAAGCGCCCCTTGTCACAGGCCTGGGAGCTCTGCCCCTCCACGCACAGTCCCTGGTTGGTGCGGACCGGGTGTCCCCCTCCATCCACAAGCTGCGGCAGCACCGCCCACTGGGGCGGACCCAGTCAGCCCCGCTGCCCCAGAACGCCCAGGCCCTGCAGCACCTGGTCATCCAACAGCAGCATCAGCAGTTTCTGGAGAAACATAAGCAGCAGTTCCAGCAGCAGCAACTGCACATGAACAAGATCATCCCCAAGCCAAGCGAGCCAGCCCGGCAGCCGGAGAGCCACCCCGAGGAGACGGAGGAGGAACTCCGTGAGCACCAGGCTCTGCTGGACGAGCCCTACCTGGACCGGCTGCCGGGGAAGGAGGCGCACCCACAGGGCGGTGTGCAGGTGAAGCAGGAGCCCATTGAGAGCGACGATGAAGAGGCGGAGCCCCCGCAGGAGGTGGAGCCAGGCCAGCGCCAGCCCAGTGAGCAGGAGCTACTCTTCAGACAGCAAGCTCTCCTGCTGGAGCAGCAACGGATCCACCAGCTGAGGAACTACCAGGCGTCCATGGAGGCTGCCGGCATCCCCGTGTCCTTCGGCAGCCACCGGCCTCTGTCCCGGGCACAGTCCTCACCGGCATCCGCCACCTTCCCCGTGTCTGTCCAGGAGCCCCCTGCCAAACCGAGGTTCACGACAGGCCTTGTGTACGACACGCTGATGCTGAAGCACCAGTGCACCTGCGGGAGCAGCAGCAGCCACCCTGAGCACGCCGGGAGGATCCAGAGCATCTGGTCCCGCCTACAGGAGACCGGCCTCCGAGGCAAATGCGAGTGCATCCGCGGACGCAAGGCCACCCTGGAGGAGCTGCAGACCGTGCACTCGGAAGCCCACACCCTCCTGTATGGCACGAACCCCCTCAACCGGCAGAAACTGGACAGTAAGAAACTTCTAGGCTCGCTGGCCTCCGTGTTCGTCCGGCTCCCCTGCGGTGGTGTTGGGGTGGACAGTGACACCATCTGGAATGAGGTGCACTCAGCAGGGGCCGCCCGCCTGGCCGTGGGCTGCGTGGTGGAGCTGGTCTTCAAGGTGGCCACAGGAGAACTGAAGAACGGCTTTGCTGTGGTCCGCCCCCTTGGACACCACGCGGAGGAGAGCACGCCCATGGGTTTTTGCTACTTCAACTCCGTGGCTGTGGCAGCCAAGCTTCTGCAGCAGAGGTTGAGTGTGAGCAAGATCCTCATCGTGGACTGGGACGTGCACCACGGAAACGGGACCCAGCAAGCTTTCTACAGCGACCCCAGCGTCCTGTACATGTCCCTCCACCGCTACGATGACGGGAACTTCTTCCCAGGCAGCGGGGCTCCTGATGAGGTGGGCACAGGGCCAGGTGTGGGTTTCAACGTCAACATGGCTTTCACTGGCGGCCTGGACCCCCCCATGGGAGACGCCGAGTACTTGGCAGCCTTCAGAACGGTGGTCATGCCCATCGCCAGTGAGTTTGCCCCGGACGTGGTGCTGGTGTCGTCAGGCTTCGACGCCGTGGAGGGCCACCCCACGCCTCTCGGGGGCTACAACCTCTCCGCCAGATGTTTTGGGTACCTGACGAAGCAGCTGATGGGCCTGGCTGGTGGCCGGATTGTCCTGGCCCTTGAGGGAGGCCACGACCTGACCGCCATCTGCGACGCCTCCGAAGCATGCGTTTCTGCTTTGCTGGGAAATGAGCTTGATCCCCTTCCGGAAAAGGTTTTACAGCAAAGACCCAATGCCAATGCTGTCCGCTCCATGGAGAAGGTCATGGAAATCCACAGCAAGTACTGGCGCTGCCTACAACGTGCAGCCTCCACGGCGGGGCGCTCTCTGATCGAGGCTCAGACTTGCGAGAACGACGAGGCCGAGACGGTCACCGCCATGGCCTCACTGTCAGTGGGCGTGAAGCCCGCCGAAAAGAGACCAGACGAGGAGCCCATGGAAGAGGAGCCGCCCCTGTAGCGCCCCTCGAAGCTGCTGTTCTCTTGTCTGTCTGTCTGTCCTGAAGCTCAGCCAAGAAACTTTCCCGTGTCACGCCTGCGTCCCACC
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |