WERAM Information


Tag Content
WERAM ID WERAM-Aim-0131
Ensembl Protein ID ENSAMEP00000011965.1
Gene Name HDAC4
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSAMEG00000011278.1 ENSAMET00000012470.1 ENSAMEP00000011965.1
ENSAMEG00000011278.1 ENSAMET00000012478.1 ENSAMEP00000011973.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 2.00e-153 510.3 94 997
HDAC Class-I 5.90e-31 108.3 106 962
Organism Ailuropoda melanoleuca
Domain Profile
  HDAC Class-II

           class-2.txt  10 mlkhqale.enkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeelesltvd 88 
+ +h+ l+ +++++ E+ + q+ l + ++++lle+ +l+ r+ +++el++ H e+ +++l+++ek +++ ++s++v+
ENSAMEP00000011965.1 94 QRQHEQLSrQHEAQLHEHIKQQQELLAMKHQQELLEHQRKLE-RHRQEQELEKQHREQKLQQLKNKEKGKESAVASTEVK 172
445555440444557788888888888888889998888886.6677889999999999999999998888887774444 PP
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles...... 84
+glvyd+ mlkhq+ ++++++hpE+++Riq+i+srlqe+gl++k+e++++rkat+eelq+vHse+h l++t+ +l++++l+s
ENSAMEP00000011965.1 657 TGLVYDTLMLKHQCACGSSSSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHALLYGTN-PLNRQKLDSkkllgs 744
79***********************************************************************.*************** PP
class-2.txt 85 ............ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklk 161
++vdsd+i++e++s+ aarlavG+v+elv+kv++gelkngfavvRPPGHHaeest+mGFC+fn+va+aakllqq+l+
ENSAMEP00000011965.1 745 ltsvfvrlpcggVGVDSDTIWNEVHSSGAARLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLD 833
***************************************************************************************** PP
class-2.txt 162 vkkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafrevvlp 247
v++ livDwDvHhGnGtq++fy+dp+vly+SlHRyd+g+ffp gsga+devg+g+g+gfnvN+a++ggl mgdaeylaafr+vv+p
ENSAMEP00000011965.1 834 VSRTLIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFP--GSGAPDEVGTGPGVGFNVNMAFTGGLdppMGDAEYLAAFRTVVMP 920
******************************************..********************************************* PP
class-2.txt 248 iakeFkPdlvlvsaGfDaaeg..dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322
ia+eF+Pd+vlvs+GfDa+eg +plgg++++akc+++ltkql++laggr+vl+lEGG++l+ai++a+ea+v+aLlg
ENSAMEP00000011965.1 921 IANEFAPDVVLVSSGFDAVEGhpTPLGGYNLSAKCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLG 997
*********************9*****************************************************96 PP

  HDAC Class-I

           class-1.txt  21 pmkpkrlsltheLvlnyglskkleivk..pkkasaeellkfhseeyieflkkvepenae.....elskelkkfnvg 89 
++ ++++ +eL+ + ++ le + ++ + +el k h+e+ ++ lk+ e+ +++ e++ +l++f ++
ENSAMEP00000011965.1 106 AQLHEHIKQQQELLAMKHQQELLEHQRklERHRQEQELEKQHREQKLQQLKNKEKGKESavastEVKMKLQEFVLN 181
444455556666665444444444444113556778999************9998887734333334456666655 PP
class-1.txt 18 qkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyi.....eflkkvepenae...elskelkkf...nvgedc.Pv 94
++hp r++ + + + + gl k e ++ +ka+ eel+++hse++ + l++ + ++++ +l++ + + +vg d+ +
ENSAMEP00000011965.1 676 SSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHAllygtNPLNRQKLDSKKllgSLTSVFVRLpcgGVGVDSdTI 764
56777777777777777777777777777777777777777777654311111334444444444444233333332222445454235 PP
class-1.txt 95 fdglfey..cqlitGasleaakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellk..khkrvlyididlhhGDgvee 177
+++++ ++l G +e + k+ ++e + a+ hha s Gfcy n + +a l++ +r l +d d+hhG+g ++
ENSAMEP00000011965.1 765 WNEVHSSgaARLAVGCVVELVFKVATGELKngFAVVRPP-GHHAEESTPMGFCYFNSVAIAAKLLQQrlDVSRTLIVDWDVHHGNGTQQ 852
555554321456677777777777776655114444444.4*******************988777744678***************** PP
class-1.txt 178 afyttdrvmtvsfhkyge.effPgtGdlsdvgaekgkyyavnvPlkdgid....DesyekifksviskvieafePeavvlqcGaDslag 261
afy+ v+ +s+h+y++ +ffPg+G ++vg++ g + vn+ ++ g+d D +y + f++v+ ++ + f P++v++ G D++ g
ENSAMEP00000011965.1 853 AFYNDPNVLYISLHRYDDgNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDppmgDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEG 941
****************9746************************99998766669********************************99 PP
class-1.txt 262 D..rlgefnlsikghaecvkf 280
+lg +nls k ++ k
ENSAMEP00000011965.1 942 HptPLGGYNLSAKCFGYLTKQ 962
63369*******999876655 PP

Protein Sequence
(Fasta)
MSSQSHPDGL SGRDQPVELL TPARVNHMPS TXEAASALPL QVAPPAVPMD LRLDHQFALP 60
VAEPTLREQQ LQQELLALKQ KQQLQRQILI AEFQRQHEQL SRQHEAQLHE HIKQQQELLA 120
MKHQQELLEH QRKLERHRQE QELEKQHREQ KLQQLKNKEK GKESAVASTE VKMKLQEFVL 180
NKKKALAHRN LNHCISSDPR YWYGKTQHSS LDQSSPPQSG VSASYNHPVL GMYDSKDDFP 240
LRKTASEPNL KLRSRLKQKV AERRSSPLLR RKDGPVVTAL KKRPLDVTDS ACSSAPGSAP 300
SSPNNSSGNV STENGITPAV ASIPAETSLA HRLVTREGSV APLPLYTSPS LPNITLGLPA 360
TGPSAGAAGQ QEAERLALPA LQQRISLFPG THLTPYLSTA PLERDGGAAH NPLLQHMVLL 420
EQPPAQTPLV TGLGALPLHA QPLVGADRVS PSMHKLRQHR PLGRTQSAPL PQNAPALQHL 480
VIQQQHQQFL EKHKQHFQQQ LHMNKIIPKQ NEPARQPESH PEETEEELRE HQALLEEPYL 540
DRLGGGEGGG KEAHALAGVQ VKQEPIESDD EEVEPPRDVE AGQRQPTEQE LLFRQQALLL 600
EQQRIHQLRN YQASMEAAGI PVSFGGHRPL SRAQSSPASA TFPMSVQEPP TKPRFTTGLV 660
YDTLMLKHQC ACGSSSSHPE HAGRIQSIWS RLQETGLRGK CECIRGRKAT LEELQTVHSE 720
AHALLYGTNP LNRQKLDSKK LLGSLTSVFV RLPCGGVGVD SDTIWNEVHS SGAARLAVGC 780
VVELVFKVAT GELKNGFAVV RPPGHHAEES TPMGFCYFNS VAIAAKLLQQ RLDVSRTLIV 840
DWDVHHGNGT QQAFYNDPNV LYISLHRYDD GNFFPGSGAP DEVGTGPGVG FNVNMAFTGG 900
LDPPMGDAEY LAAFRTVVMP IANEFAPDVV LVSSGFDAVE GHPTPLGGYN LSAKCFGYLT 960
KQLMGLAGGR IVLALEGGHD LTAICDASEA CVSALLGNEL DPLPEKVLQQ RPNANAVRSM 1020
EKVIEIHSEP WRSLPRLCST VGHSLVEAQK CENEEAETVT AMASLSVGVK PAEKRPDEEP 1080
MEEEPPL 1087
Nucleotide Sequence
(Fasta)
ATGAGCTCCC AAAGCCATCC AGATGGACTT TCTGGCCGAG ACCAGCCCGT GGAGCTGTTG 60
ACCCCTGCCC GCGTGAACCA CATGCCCAGC ACGGNGGAAG CGGCCTCCGC GCTGCCTCTG 120
CAGGTCGCTC CCCCGGCGGT GCCCATGGAC CTCCGCCTGG ACCACCAGTT TGCGCTGCCC 180
GTGGCGGAGC CCACCCTCCG GGAGCAGCAG CTGCAGCAGG AGCTGCTGGC CCTCAAGCAG 240
AAGCAGCAGC TCCAGAGGCA GATTCTCATC GCCGAGTTCC AAAGGCAGCA CGAGCAGCTC 300
TCCCGGCAGC ACGAGGCCCA GCTGCACGAG CACATAAAAC AACAGCAGGA GCTTCTGGCC 360
ATGAAGCACC AGCAGGAGCT GCTGGAACAC CAGCGGAAGC TCGAGAGGCA CCGCCAGGAG 420
CAGGAGCTGG AGAAGCAGCA CCGGGAGCAG AAGCTGCAGC AGCTGAAGAA CAAGGAGAAA 480
GGCAAGGAGA GTGCGGTGGC CAGCACAGAA GTGAAGATGA AGTTGCAAGA GTTTGTCCTC 540
AATAAGAAGA AGGCGCTGGC CCACCGGAAC CTCAACCACT GCATTTCCAG CGACCCTCGC 600
TACTGGTACG GGAAGACACA GCACAGTTCC CTTGACCAGA GCTCCCCGCC CCAGAGCGGG 660
GTGTCGGCCT CCTACAACCA TCCGGTCCTG GGAATGTATG ACAGCAAGGA TGACTTCCCG 720
CTCAGAAAAA CAGCCTCTGA ACCCAATTTG AAATTACGGT CCAGGCTAAA GCAGAAAGTG 780
GCTGAACGAC GGAGCAGCCC CCTGCTACGT AGGAAAGATG GGCCAGTGGT TACGGCTCTG 840
AAGAAGCGTC CGCTGGATGT CACAGACTCG GCGTGCAGCA GCGCCCCCGG CTCCGCGCCC 900
AGCTCCCCCA ACAACAGCTC CGGGAACGTC AGCACGGAGA ACGGGATCAC GCCCGCCGTC 960
GCCAGCATCC CAGCCGAGAC CAGCTTGGCG CACAGACTCG TGACTCGAGA AGGCTCCGTG 1020
GCCCCACTCC CCCTCTACAC GTCGCCATCC TTGCCCAACA TCACGCTGGG ACTGCCTGCC 1080
ACCGGCCCGT CTGCTGGGGC GGCCGGCCAG CAGGAAGCCG AGAGACTCGC TCTCCCAGCC 1140
CTCCAGCAGC GGATCTCCCT CTTCCCCGGC ACCCACCTCA CTCCCTACCT GAGCACGGCG 1200
CCCCTGGAGC GCGACGGCGG GGCTGCGCAC AACCCGCTCC TGCAGCACAT GGTCCTGCTG 1260
GAGCAGCCGC CCGCGCAGAC GCCCCTCGTC ACAGGCCTGG GCGCGCTGCC CCTGCACGCG 1320
CAGCCTCTGG TGGGTGCGGA CCGCGTGTCC CCATCCATGC ACAAGCTGCG GCAGCACCGC 1380
CCGCTGGGGC GCACCCAGTC GGCCCCGCTG CCCCAGAACG CGCCAGCCCT GCAACACCTG 1440
GTGATCCAGC AGCAGCACCA GCAGTTCCTG GAGAAGCACA AGCAGCACTT CCAGCAGCAG 1500
CTGCACATGA ACAAGATTAT CCCTAAACAG AACGAGCCGG CCCGGCAGCC CGAGAGCCAC 1560
CCCGAGGAGA CCGAGGAGGA GCTTCGCGAG CACCAGGCCC TTCTGGAGGA GCCCTACCTG 1620
GACCGGCTGG GGGGGGGGGA GGGGGGGGGG AAGGAGGCGC ACGCGCTGGC CGGAGTGCAG 1680
GTGAAGCAGG AGCCCATCGA GAGTGACGAC GAGGAGGTGG AGCCCCCGCG GGACGTAGAG 1740
GCCGGCCAGC GCCAGCCCAC GGAGCAGGAG CTGCTCTTCA GACAGCAAGC CCTCCTCCTG 1800
GAGCAGCAGC GGATCCACCA GCTGAGGAAC TACCAGGCGT CCATGGAGGC CGCCGGCATC 1860
CCCGTGTCCT TTGGCGGCCA CCGGCCTCTG TCCCGGGCAC AGTCTTCCCC GGCGTCTGCC 1920
ACCTTCCCCA TGTCTGTGCA GGAGCCTCCC ACCAAACCGA GGTTCACCAC AGGCCTCGTG 1980
TACGACACGC TGATGCTGAA GCACCAGTGC GCCTGCGGGA GCAGCAGCAG CCACCCCGAG 2040
CACGCCGGCC GCATCCAGAG CATCTGGTCG CGGCTGCAGG AGACCGGCCT CCGGGGCAAA 2100
TGCGAGTGCA TCCGCGGACG GAAGGCCACG CTGGAAGAGC TGCAGACGGT GCACTCGGAG 2160
GCGCACGCCC TGCTCTACGG CACAAACCCC CTCAACAGGC AGAAACTGGA CAGTAAGAAA 2220
CTTCTAGGCT CGCTAACGTC CGTGTTTGTC AGGCTGCCCT GCGGTGGTGT TGGGGTGGAC 2280
AGCGACACCA TATGGAACGA GGTGCACTCG TCAGGGGCGG CCCGCCTGGC CGTGGGCTGC 2340
GTGGTCGAGC TGGTGTTCAA GGTGGCCACG GGGGAGCTGA AGAACGGCTT TGCTGTGGTC 2400
CGCCCTCCAG GACATCACGC AGAGGAGAGC ACACCCATGG GCTTCTGTTA CTTTAACTCC 2460
GTGGCCATCG CAGCCAAGCT TCTCCAGCAG CGGCTGGACG TGAGCAGGAC CCTCATAGTG 2520
GACTGGGACG TTCACCACGG AAACGGGACC CAGCAGGCCT TCTACAATGA CCCGAATGTC 2580
CTGTACATCT CCCTTCACCG CTATGATGAC GGGAACTTCT TCCCGGGCAG TGGGGCTCCA 2640
GACGAGGTGG GCACAGGGCC AGGTGTGGGC TTCAATGTCA ACATGGCTTT CACCGGCGGC 2700
CTTGACCCCC CCATGGGAGA CGCGGAGTAC TTGGCGGCCT TCAGGACTGT GGTCATGCCC 2760
ATCGCGAACG AGTTTGCCCC AGACGTGGTG CTCGTGTCGT CAGGCTTCGA CGCTGTGGAG 2820
GGCCACCCCA CGCCCCTCGG CGGCTACAAC CTCTCGGCCA AATGTTTTGG CTACCTGACG 2880
AAGCAGCTGA TGGGCTTGGC TGGCGGCCGG ATCGTTCTGG CCCTGGAGGG GGGCCACGAC 2940
CTCACGGCCA TCTGCGACGC CTCGGAAGCA TGTGTTTCTG CTTTGCTGGG CAACGAGCTT 3000
GACCCTCTCC CGGAGAAGGT TTTACAGCAG AGGCCCAATG CTAACGCGGT CCGGTCCATG 3060
GAGAAAGTCA TTGAAATTCA CAGTGAGCCC TGGCGCTCCC TGCCGCGCCT CTGCTCCACG 3120
GTGGGGCACT CTCTGGTAGA GGCCCAGAAG TGCGAGAATG AGGAAGCGGA GACCGTCACC 3180
GCCATGGCCT CTCTGTCCGT GGGCGTGAAG CCCGCTGAGA AGAGACCCGA CGAGGAGCCC 3240
ATGGAAGAGG AGCCGCCCCT G 3262
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Mup-0001 ENSMPUP00000000123.1 Mustela putorius furo 96 0.0 1829
WERAM-Caf-0133 ENSCAFP00000018541.3 Canis familiaris 96 0.0 1780
WERAM-Pat-0104 ENSPTRP00000022412.3 Pan troglodytes 93 0.0 1756
WERAM-Hos-0025 ENSP00000264606.3 Homo sapiens 93 0.0 1756
WERAM-Bot-0159 ENSBTAP00000023621.5 Bos taurus 93 0.0 1753
WERAM-Fec-0140 ENSFCAP00000013207.3 Felis catus 96 0.0 1749
WERAM-Chs-0068 ENSCSAP00000002314.1 Chlorocebus sabaeus 92 0.0 1748
WERAM-Cap-0143 ENSCPOP00000011770.2 Cavia porcellus 91 0.0 1726
WERAM-Myl-0159 ENSMLUP00000013297.2 Myotis lucifugus 94 0.0 1709
WERAM-Ran-0135 ENSRNOP00000027622.5 Rattus norvegicus 92 0.0 1689
WERAM-Tag-0050 ENSTGUP00000003338.1 Taeniopygia guttata 89 0.0 1687
WERAM-Sus-0169 ENSSSCP00000025173.1 Sus scrofa 93 0.0 1684
WERAM-Mum-0077 ENSMUSP00000008995.8 Mus musculus 91 0.0 1682
WERAM-Poa-0116 ENSPPYP00000014905.2 Pongo abelii 90 0.0 1662
WERAM-Gaga-0049 ENSGALP00000033098.3 Gallus gallus 90 0.0 1660
WERAM-Ict-0095 ENSSTOP00000009983.2 Ictidomys tridecemlineatus 91 0.0 1653
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 88 0.0 1652
WERAM-Pes-0174 ENSPSIP00000020522.1 Pelodiscus sinensis 90 0.0 1644
WERAM-Mam-0041 ENSMMUP00000007984.2 Macaca mulatta 89 0.0 1642
WERAM-Dan-0037 ENSDNOP00000003826.3 Dasypus novemcinctus 89 0.0 1615
WERAM-Gog-0157 ENSGGOP00000013985.2 Gorilla gorilla 87 0.0 1607
WERAM-Anp-0035 ENSAPLP00000004005.1 Anas platyrhynchos 88 0.0 1602
WERAM-Anc-0099 ENSACAP00000009498.3 Anolis carolinensis 80 0.0 1600
WERAM-Lac-0062 ENSLACP00000008432.1 Latimeria chalumnae 83 0.0 1592
WERAM-Fia-0056 ENSFALP00000004005.1 Ficedula albicollis 89 0.0 1582
WERAM-Otg-0061 ENSOGAP00000004404.2 Otolemur garnettii 87 0.0 1559
WERAM-Loa-0107 ENSLAFP00000009167.2 Loxodonta africana 86 0.0 1554
WERAM-Meg-0023 ENSMGAP00000001752.2 Meleagris gallopavo 90 0.0 1513
WERAM-Xet-0035 ENSXETP00000010592.2 Xenopus tropicalis 80 0.0 1463
WERAM-Dio-0038 ENSDORP00000004330.1 Dipodomys ordii 81 0.0 1460
WERAM-Leo-0082 ENSLOCP00000011105.1 Lepisosteus oculatus 80 0.0 1455
WERAM-Ova-0200 ENSOARP00000020106.1 Ovis aries 84 0.0 1420
WERAM-Dar-0198 ENSDARP00000131327.1 Danio rerio 76 0.0 1411
WERAM-Orn-0049 ENSONIP00000005635.1 Oreochromis niloticus 74 0.0 1296
WERAM-Tar-0063 ENSTRUP00000012899.1 Takifugu rubripes 73 0.0 1249
WERAM-Gaa-0020 ENSGACP00000002894.1 Gasterosteus aculeatus 73 0.0 1249
WERAM-Xim-0022 ENSXMAP00000002092.1 Xiphophorus maculatus 72 0.0 1246
WERAM-Asm-0202 ENSAMXP00000018862.1 Astyanax mexicanus 73 0.0 1246
WERAM-Pof-0029 ENSPFOP00000001978.1 Poecilia formosa 72 0.0 1240
WERAM-Ten-0103 ENSTNIP00000011743.1 Tetraodon nigroviridis 70 0.0 1230
WERAM-Gam-0063 ENSGMOP00000006368.1 Gadus morhua 70 0.0 1154
WERAM-Paa-0012 ENSPANP00000003104.1 Papio anubis 92 0.0 1133
WERAM-Caj-0101 ENSCJAP00000017313.2 Callithrix jacchus 91 0.0 1123
WERAM-Ptv-0078 ENSPVAP00000007254.1 Pteropus vampyrus 74 0.0 1005
WERAM-Tut-0038 ENSTTRP00000002947.1 Tursiops truncatus 83 0.0 1004
WERAM-Sah-0044 ENSSHAP00000005074.1 Sarcophilus harrisii 66 0.0 982
WERAM-Nol-0183 ENSNLEP00000020216.1 Nomascus leucogenys 56 0.0 946
WERAM-Orc-0142 ENSOCUP00000012429.3 Oryctolagus cuniculus 56 0.0 941
WERAM-Eqc-0153 ENSECAP00000016533.1 Equus caballus 55 0.0 939
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 55 0.0 937
WERAM-Pem-0041 ENSPMAP00000005402.1 Petromyzon marinus 56 0.0 934
WERAM-Mod-0016 ENSMODP00000001749.3 Monodelphis domestica 55 0.0 923
WERAM-Mae-0145 ENSMEUP00000015025.1 Macropus eugenii 55 0.0 848
WERAM-Ocp-0153 ENSOPRP00000015747.2 Ochotona princeps 52 0.0 831
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 50 0.0 822
WERAM-Soa-0055 ENSSARP00000005400.1 Sorex araneus 54 0.0 795
WERAM-Orla-0199 ENSORLP00000022663.1 Oryzias latipes 80 0.0 788
WERAM-Prc-0004 ENSPCAP00000000473.1 Procavia capensis 50 0.0 684
WERAM-Mim-0022 ENSMICP00000002393.1 Microcebus murinus 69 0.0 653
WERAM-Ere-0042 ENSEEUP00000003697.1 Erinaceus europaeus 66 0.0 636
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 59 5e-158 556
WERAM-Ect-0082 ENSETEP00000009275.1 Echinops telfairi 61 1e-146 518
WERAM-Cii-0046 ENSCINP00000016829.3 Ciona intestinalis 53 1e-130 465
WERAM-Tub-0129 ENSTBEP00000014362.1 Tupaia belangeri 52 2e-130 464
WERAM-Chh-0086 ENSCHOP00000009630.1 Choloepus hoffmanni 49 2e-128 457
WERAM-Cae-0008 C10E2.3a Caenorhabditis elegans 48 4e-118 423
WERAM-Cis-0060 ENSCSAVP00000013851.1 Ciona savignyi 55 9e-92 336
WERAM-Sem-0022 EFJ08599 Selaginella moellendorffii 45 2e-77 288
Created Date 25-Jun-2016