WERAM Information


Tag Content
WERAM ID WERAM-Loa-0107
Ensembl Protein ID ENSLAFP00000009167.2
Gene Name HDAC4
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLAFG00000010952.2 ENSLAFT00000010960.2 ENSLAFP00000009167.2
ENSLAFG00000010952.2 ENSLAFT00000033876.1 ENSLAFP00000021735.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 1.40e-154 514.5 42 962
HDAC Class-I 7.40e-31 108.2 645 927
Organism Loxodonta africana
Domain Profile
  HDAC Class-II

           class-2.txt 29 RiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeele 83
+q+ l +l++++ l++ +++ + ++e+l H++++ e+++++ekl++e+ +
ENSLAFP00000009167.2 42 QLQQELLALKQKQQLQRQILIAEFQRQHEQLSRQHEAQLHEHVKQNEKLTHEQTR 96
566667778888888888899999999*******************999988765 PP
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles...... 84
+glvyd+ mlkhq++++n+++hpE+++Riq+i+srlqe+gl++++e++++rkat+eelq+vHse+h l++t+ +l++++l+s
ENSLAFP00000009167.2 627 TGLVYDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRSQCECIRGRKATLEELQTVHSEAHALLYGTN-PLNRQKLDSsltsvf 714
79***********************************************************************.*************** PP
class-2.txt 85 .......ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkil 166
++vdsd+i++e++s+ aarlavG+v+elv+kv++gelkngfavvRPPGHHaeest+mGFC+fn+vavaakllqq+l+v++il
ENSLAFP00000009167.2 715 vrlpcggVGVDSDTIWNEVHSSGAARLAVGCVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQRLSVSRIL 803
***************************************************************************************** PP
class-2.txt 167 ivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafrevvlpiakeF 252
ivDwDvHhGnGtq++fy+dp+vly+SlHRyd+g+ffp gsga+devg+g+g+gfnvN+a++ggl mgdaeyl+afr+vv+p+a eF
ENSLAFP00000009167.2 804 IVDWDVHHGNGTQQAFYSDPSVLYISLHRYDDGNFFP--GSGAPDEVGTGPGVGFNVNMAFTGGLdppMGDAEYLTAFRTVVMPVAVEF 890
*************************************..************************************************** PP
class-2.txt 253 kPdlvlvsaGfDaaeg..dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322
+Pd+vlvs+GfDa+eg +plgg++++a+c+++ltkql++laggr+vl+lEGG++l+ai++a+ea+v+aLlg
ENSLAFP00000009167.2 891 APDVVLVSSGFDAVEGhpTPLGGYNLSARCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLG 962
****************9*****************************************************96 PP

  HDAC Class-I

           class-1.txt  17 gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkf.......nvgedc.Pvfdg 97 
+++hp r++ + + + + gl + e ++ +ka+ eel+++hse++ +l +p n ++l ++l+ +vg d+ + ++
ENSLAFP00000009167.2 645 TNSHPEHAGRIQSIWSRLQETGLRSQCECIRGRKATLEELQTVHSEAHA-LLYGTNPLNRQKLDSSLTSVfvrlpcgGVGVDSdTIWNE 732
567899999999999999999***********************98764.455555555554443333220111222455565236677 PP
class-1.txt 98 lfey..cqlitGasleaakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellk..khkrvlyididlhhGDgveeafy 180
+++ ++l G +e + k+ ++e + a+ G hha s Gfcy n + +a l++ + +r+l +d d+hhG+g ++afy
ENSLAFP00000009167.2 733 VHSSgaARLAVGCVVELVFKVATGELKngFAVVRPPG-HHAEESTPMGFCYFNSVAVAAKLLQQrlSVSRILIVDWDVHHGNGTQQAFY 820
7654225678899999999999887661255555554.*****************99987776645789******************** PP
class-1.txt 181 ttdrvmtvsfhkyge.effPgtGdlsdvgaekgkyyavnvPlkdgid....DesyekifksviskvieafePeavvlqcGaDslagD.. 262
v+ +s+h+y++ +ffPg+G ++vg++ g + vn+ ++ g+d D +y + f++v+ +v f P++v++ G D++ g
ENSLAFP00000009167.2 821 SDPSVLYISLHRYDDgNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDppmgDAEYLTAFRTVVMPVAVEFAPDVVLVSSGFDAVEGHpt 909
*************9746************************99998766669********************************99633 PP
class-1.txt 263 rlgefnlsikghaecvkf 280
+lg +nls + ++ k
ENSLAFP00000009167.2 910 PLGGYNLSARCFGYLTKQ 927
69******9998876655 PP

Protein Sequence
(Fasta)
PLTVDAVTAL PLQVAPTAVP MDLRLDPPFP LPVAEPALRE QQLQQELLAL KQKQQLQRQI 60
LIAEFQRQHE QLSRQHEAQL HEHVKQNEKL THEQTRCIHQ RNMRKGVEDR ECSRGHGEAL 120
SLQLKNKEKG KESAVASTEV KMKLQEFVLN KKKALAHRSL NHCISSDPRY WYGKKKNSSL 180
DQSSPPQSGV SASYNHPVLG MYDAKDDFPL RKTASEPNLK LRSRLKQKVA ERRSSPLLRR 240
KDGPVVTALK KRPLDVTDSA CSSAPGSGPS SPNNSSSNVS SENGITPAVP SIPAETTLAH 300
RLVAREVTQL PLYTSPSLPN ITLGLPATGP SAGAAGQQDA ERLALPALQQ RIPLFPGTHL 360
APYLSAAPLE RDGGAAHNPL LQHLVLLEQP PPQTPLVAGL GTLPLHAQSL VGADRVSPSV 420
HKLRQHRPLG RTQSAPLPQN TQALQHLVMV GLQEQALHVS QVGLQEQALH VSRIISKPSE 480
PTRQPESHPE ETEEELREHQ ALLEEPCLDR LPGQKGVHTL AGVQVKQEPV ESDEEETEAA 540
REAEPGQRQA TEQELLFRQP PPPHPSKPLL EQQRIHQLRN YQASMEAAGI PVSFGGHRPL 600
SRAQSSPASA TFPMSVQEPP AKPRFTTGLV YDTLMLKHQC TCGNTNSHPE HAGRIQSIWS 660
RLQETGLRSQ CECIRGRKAT LEELQTVHSE AHALLYGTNP LNRQKLDSSL TSVFVRLPCG 720
GVGVDSDTIW NEVHSSGAAR LAVGCVVELV FKVATGELKN GFAVVRPPGH HAEESTPMGF 780
CYFNSVAVAA KLLQQRLSVS RILIVDWDVH HGNGTQQAFY SDPSVLYISL HRYDDGNFFP 840
GSGAPDEVGT GPGVGFNVNM AFTGGLDPPM GDAEYLTAFR TVVMPVAVEF APDVVLVSSG 900
FDAVEGHPTP LGGYNLSARC FGYLTKQLMG LAGGRIVLAL EGGHDLTAIC DASEACVSAL 960
LGNELDPLPE KTLQQRSNAN AIRSMEKVIE IHSKYWRSLQ RTASTVGYSL VEAQKCENEE 1020
AETVTAMASL SVGVKSAEKR PDEEPMEEEP PL 1052
Nucleotide Sequence
(Fasta)
CCCCTCACAG TGGACGCAGT CACAGCACTG CCCCTGCAAG TCGCTCCCAC GGCTGTGCCC 60
ATGGACCTGC GCCTGGACCC ACCGTTCCCG CTGCCCGTGG CGGAGCCTGC CCTGCGCGAG 120
CAGCAGCTGC AGCAGGAGCT CCTGGCCCTG AAGCAGAAGC AGCAGCTCCA GAGGCAGATC 180
CTCATCGCCG AGTTCCAGCG GCAGCATGAG CAGCTGTCCC GGCAGCACGA GGCTCAGCTC 240
CACGAGCATG TCAAGCAAAA TGAGAAACTG ACACATGAAC AAACCCGTTG TATCCATCAA 300
AGGAATATGC GGAAGGGCGT GGAGGACCGG GAATGCAGTC GGGGCCATGG GGAGGCTCTG 360
AGTTTGCAGC TCAAGAACAA GGAGAAGGGC AAGGAGAGTG CAGTGGCCAG CACGGAAGTG 420
AAGATGAAGC TACAGGAGTT TGTCCTGAAC AAGAAGAAGG CGCTGGCCCA CCGCAGCCTG 480
AACCACTGCA TCTCCAGTGA CCCTCGCTAC TGGTACGGGA AAAAAAAGAA CAGCTCCCTC 540
GACCAGAGCT CGCCCCCCCA GAGCGGGGTG TCAGCCTCCT ACAACCACCC GGTCCTGGGC 600
ATGTACGACG CCAAAGACGA CTTTCCGCTC AGGAAAACAG CTTCTGAGCC CAACCTGAAG 660
TTACGGTCCA GGCTAAAGCA GAAAGTGGCT GAGAGACGGA GCAGCCCCCT GTTGCGCAGA 720
AAAGATGGGC CAGTGGTCAC CGCTCTGAAA AAGCGCCCAT TGGATGTCAC AGACTCCGCG 780
TGCAGCAGTG CCCCGGGCTC CGGGCCCAGC TCACCCAACA ACAGCTCCAG CAACGTCAGC 840
TCGGAGAACG GCATCACGCC GGCGGTCCCC AGCATCCCGG CCGAGACCAC CCTGGCGCAC 900
AGACTGGTGG CCCGCGAGGT GACACAGCTC CCTCTCTACA CATCACCTTC CTTGCCCAAC 960
ATCACCCTGG GACTTCCTGC CACTGGCCCT TCTGCTGGGG CGGCCGGCCA GCAGGATGCT 1020
GAGCGCCTTG CTCTCCCAGC GCTCCAGCAG CGGATCCCCC TCTTCCCTGG CACCCACCTC 1080
GCCCCCTACC TGAGTGCTGC GCCCCTGGAG CGGGACGGCG GGGCCGCACA CAACCCTCTC 1140
CTGCAGCACC TGGTCTTACT GGAGCAGCCG CCGCCACAGA CGCCCTTGGT CGCAGGCCTG 1200
GGCACGCTGC CCCTCCACGC CCAGTCCCTG GTCGGTGCAG ACCGGGTGTC CCCGTCGGTG 1260
CACAAGCTGC GGCAGCACCG CCCGCTGGGG CGCACGCAGT CAGCACCGCT GCCCCAGAAC 1320
ACCCAGGCCC TGCAGCACCT GGTCATGGTG GGCCTGCAGG AGCAGGCTCT GCACGTGAGC 1380
CAGGTAGGGC TGCAGGAGCA GGCTCTGCAC GTGAGCAGGA TCATCTCCAA GCCGAGCGAG 1440
CCAACCCGGC AGCCCGAGAG CCACCCCGAG GAGACAGAGG AGGAGCTCCG GGAGCACCAG 1500
GCCTTGCTGG AGGAGCCCTG CCTGGACCGG CTGCCAGGCC AGAAGGGGGT GCACACGCTG 1560
GCCGGCGTGC AGGTGAAGCA GGAGCCCGTG GAGAGCGACG AGGAGGAGAC AGAGGCTGCC 1620
CGGGAGGCCG AGCCAGGTCA GCGCCAGGCC ACCGAGCAGG AGCTGCTCTT CAGACAGCCC 1680
CCCCCCCCCC ACCCCAGCAA GCCTCTCCTG GAGCAGCAGA GGATCCACCA GCTTAGGAAC 1740
TACCAGGCGT CCATGGAGGC GGCTGGCATC CCTGTGTCCT TCGGTGGCCA CCGGCCCCTG 1800
TCCCGGGCGC AGTCCTCCCC GGCGTCTGCC ACCTTCCCCA TGTCTGTGCA GGAGCCCCCC 1860
GCCAAGCCGC GCTTCACGAC AGGCCTCGTG TACGACACGC TGATGTTGAA GCACCAGTGC 1920
ACCTGCGGGA ACACCAACAG CCATCCCGAG CACGCCGGCC GCATCCAGAG CATCTGGTCA 1980
CGTCTGCAGG AGACCGGCCT CCGCAGCCAG TGTGAGTGCA TCCGTGGCCG CAAGGCCACG 2040
CTGGAGGAGC TGCAGACGGT GCACTCAGAG GCCCACGCGC TGCTTTACGG CACCAATCCC 2100
CTCAACCGCC AGAAACTGGA CAGCTCCCTC ACCTCTGTGT TTGTGCGGCT CCCCTGTGGT 2160
GGTGTTGGGG TGGACAGCGA CACCATATGG AACGAGGTGC ACTCGTCGGG GGCGGCCCGC 2220
CTGGCCGTGG GCTGTGTGGT GGAGCTGGTC TTCAAGGTGG CTACAGGCGA GCTGAAGAAT 2280
GGCTTTGCGG TGGTCCGCCC CCCGGGACAC CATGCAGAGG AGAGCACGCC CATGGGCTTC 2340
TGCTACTTCA ACTCCGTGGC CGTGGCAGCC AAGCTTCTCC AGCAGAGGTT GAGTGTCAGC 2400
AGGATCCTCA TCGTGGACTG GGACGTGCAC CACGGGAACG GGACGCAGCA GGCCTTCTAC 2460
AGCGACCCCA GCGTGCTGTA CATCTCCCTG CACCGCTACG ACGATGGGAA CTTCTTCCCG 2520
GGCAGCGGGG CCCCTGATGA GGTGGGCACA GGACCCGGCG TGGGCTTCAA CGTGAACATG 2580
GCCTTCACTG GCGGCCTCGA CCCCCCCATG GGTGACGCCG AGTACCTGAC TGCTTTCAGG 2640
ACAGTGGTCA TGCCAGTTGC TGTCGAGTTT GCGCCGGACG TGGTGCTGGT GTCGTCAGGC 2700
TTCGACGCGG TGGAGGGTCA CCCCACACCC CTCGGAGGCT ACAACCTCTC CGCCAGATGT 2760
TTCGGGTACC TCACGAAGCA GTTGATGGGC CTGGCCGGCG GCCGCATCGT CCTGGCCCTG 2820
GAAGGTGGCC ACGACCTGAC GGCCATCTGT GATGCCTCAG AAGCCTGCGT CTCTGCCCTG 2880
CTGGGGAACG AGCTCGACCC TCTCCCAGAG AAGACTTTAC AGCAAAGATC CAACGCCAAC 2940
GCCATCCGGT CCATGGAGAA GGTCATCGAG ATCCACAGCA AGTACTGGCG CTCCCTACAG 3000
CGCACCGCCT CAACCGTGGG GTACTCGCTG GTGGAGGCCC AGAAGTGCGA GAACGAGGAG 3060
GCTGAGACGG TCACCGCCAT GGCCTCACTG TCCGTGGGCG TCAAGTCGGC TGAAAAGAGA 3120
CCAGACGAGG AACCCATGGA GGAGGAGCCG CCCCTGTAG
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bot-0159 ENSBTAP00000023621.5 Bos taurus 87 0.0 1655
WERAM-Hos-0025 ENSP00000264606.3 Homo sapiens 86 0.0 1654
WERAM-Pat-0104 ENSPTRP00000022412.3 Pan troglodytes 86 0.0 1652
WERAM-Myl-0159 ENSMLUP00000013297.2 Myotis lucifugus 86 0.0 1652
WERAM-Mup-0001 ENSMPUP00000000123.1 Mustela putorius furo 86 0.0 1641
WERAM-Chs-0068 ENSCSAP00000002314.1 Chlorocebus sabaeus 85 0.0 1637
WERAM-Aim-0131 ENSAMEP00000011965.1 Ailuropoda melanoleuca 86 0.0 1635
WERAM-Sus-0169 ENSSSCP00000025173.1 Sus scrofa 86 0.0 1634
WERAM-Ict-0095 ENSSTOP00000009983.2 Ictidomys tridecemlineatus 86 0.0 1628
WERAM-Cap-0143 ENSCPOP00000011770.2 Cavia porcellus 85 0.0 1626
WERAM-Fec-0140 ENSFCAP00000013207.3 Felis catus 87 0.0 1618
WERAM-Gog-0157 ENSGGOP00000013985.2 Gorilla gorilla 85 0.0 1617
WERAM-Mum-0077 ENSMUSP00000008995.8 Mus musculus 86 0.0 1611
WERAM-Ran-0135 ENSRNOP00000027622.5 Rattus norvegicus 86 0.0 1609
WERAM-Caf-0133 ENSCAFP00000018541.3 Canis familiaris 86 0.0 1605
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 84 0.0 1600
WERAM-Gaga-0049 ENSGALP00000033098.3 Gallus gallus 84 0.0 1595
WERAM-Pes-0174 ENSPSIP00000020522.1 Pelodiscus sinensis 84 0.0 1575
WERAM-Dan-0037 ENSDNOP00000003826.3 Dasypus novemcinctus 84 0.0 1573
WERAM-Tag-0050 ENSTGUP00000003338.1 Taeniopygia guttata 83 0.0 1571
WERAM-Anp-0035 ENSAPLP00000004005.1 Anas platyrhynchos 83 0.0 1566
WERAM-Poa-0116 ENSPPYP00000014905.2 Pongo abelii 83 0.0 1555
WERAM-Mam-0041 ENSMMUP00000007984.2 Macaca mulatta 82 0.0 1543
WERAM-Anc-0099 ENSACAP00000009498.3 Anolis carolinensis 78 0.0 1532
WERAM-Otg-0061 ENSOGAP00000004404.2 Otolemur garnettii 81 0.0 1500
WERAM-Fia-0056 ENSFALP00000004005.1 Ficedula albicollis 83 0.0 1482
WERAM-Lac-0062 ENSLACP00000008432.1 Latimeria chalumnae 77 0.0 1469
WERAM-Meg-0023 ENSMGAP00000001752.2 Meleagris gallopavo 86 0.0 1456
WERAM-Leo-0082 ENSLOCP00000011105.1 Lepisosteus oculatus 76 0.0 1425
WERAM-Xet-0035 ENSXETP00000010592.2 Xenopus tropicalis 75 0.0 1405
WERAM-Ova-0200 ENSOARP00000020106.1 Ovis aries 83 0.0 1404
WERAM-Dio-0038 ENSDORP00000004330.1 Dipodomys ordii 76 0.0 1385
WERAM-Dar-0198 ENSDARP00000131327.1 Danio rerio 74 0.0 1362
WERAM-Orn-0049 ENSONIP00000005635.1 Oreochromis niloticus 71 0.0 1249
WERAM-Ten-0103 ENSTNIP00000011743.1 Tetraodon nigroviridis 69 0.0 1202
WERAM-Tar-0063 ENSTRUP00000012899.1 Takifugu rubripes 67 0.0 1201
WERAM-Xim-0022 ENSXMAP00000002092.1 Xiphophorus maculatus 67 0.0 1199
WERAM-Pof-0029 ENSPFOP00000001978.1 Poecilia formosa 67 0.0 1194
WERAM-Asm-0202 ENSAMXP00000018862.1 Astyanax mexicanus 68 0.0 1193
WERAM-Paa-0012 ENSPANP00000003104.1 Papio anubis 87 0.0 1113
WERAM-Caj-0101 ENSCJAP00000017313.2 Callithrix jacchus 87 0.0 1103
WERAM-Gaa-0148 ENSGACP00000019223.1 Gasterosteus aculeatus 63 0.0 1065
WERAM-Tut-0038 ENSTTRP00000002947.1 Tursiops truncatus 81 0.0 971
WERAM-Sah-0044 ENSSHAP00000005074.1 Sarcophilus harrisii 65 0.0 953
WERAM-Ptv-0078 ENSPVAP00000007254.1 Pteropus vampyrus 70 0.0 937
WERAM-Eqc-0153 ENSECAP00000016533.1 Equus caballus 53 0.0 917
WERAM-Nol-0183 ENSNLEP00000020216.1 Nomascus leucogenys 54 0.0 917
WERAM-Orc-0142 ENSOCUP00000012429.3 Oryctolagus cuniculus 53 0.0 913
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 53 0.0 905
WERAM-Mod-0016 ENSMODP00000001749.3 Monodelphis domestica 53 0.0 890
WERAM-Ocp-0153 ENSOPRP00000015747.2 Ochotona princeps 49 0.0 806
WERAM-Soa-0055 ENSSARP00000005400.1 Sorex araneus 49 0.0 794
WERAM-Orla-0199 ENSORLP00000022663.1 Oryzias latipes 79 0.0 785
WERAM-Gam-0063 ENSGMOP00000006368.1 Gadus morhua 77 0.0 762
WERAM-Mae-0089 ENSMEUP00000008883.1 Macropus eugenii 85 0.0 714
WERAM-Pem-0041 ENSPMAP00000005402.1 Petromyzon marinus 70 0.0 710
WERAM-Prc-0083 ENSPCAP00000007167.1 Procavia capensis 46 0.0 707
WERAM-Mim-0087 ENSMICP00000008193.1 Microcebus murinus 47 0.0 681
WERAM-Ere-0042 ENSEEUP00000003697.1 Erinaceus europaeus 68 2e-177 620
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 53 2e-170 597
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 59 1e-158 558
WERAM-Ect-0068 ENSETEP00000007698.1 Echinops telfairi 41 2e-157 554
WERAM-Tub-0129 ENSTBEP00000014362.1 Tupaia belangeri 52 2e-131 468
WERAM-Chh-0086 ENSCHOP00000009630.1 Choloepus hoffmanni 51 6e-129 459
WERAM-Cii-0046 ENSCINP00000016829.3 Ciona intestinalis 53 1e-128 458
WERAM-Cae-0008 C10E2.3a Caenorhabditis elegans 48 4e-117 420
WERAM-Cis-0060 ENSCSAVP00000013851.1 Ciona savignyi 55 3e-92 337
WERAM-Sem-0010 EFJ19764 Selaginella moellendorffii 44 7e-80 296
Created Date 25-Jun-2016