WERAM Information


Tag Content
WERAM ID WERAM-Gaa-0148
Ensembl Protein ID ENSGACP00000019223.1
Gene Name hdac4
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSGACG00000014564.1 ENSGACT00000019261.1 ENSGACP00000019223.1
ENSGACG00000014564.1 ENSGACT00000019265.1 ENSGACP00000019227.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 1.00e-136 455.9 109 959
HDAC Class-I 1.20e-24 87.9 639 923
Organism Gasterosteus aculeatus
Domain Profile
  HDAC Class-II

           class-2.txt  53 katkeelqlvHseehvelletae.klekeelesltvdsdsiyle 95 
++++e l+l H++e++e+ ++ e + ++ele+++ ++ + l+
ENSGACP00000019223.1 109 QQQQELLALKHQQELLEHQRKMEnHRLEQELEKQQREQKLLLLK 152
56677778889999999988887778888888866555544444 PP
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles...... 84
+glvyd+ m khq++++n+++hpE+++Riq+i+srlqe+gl+ ++e++++rka++eelq+vHse+hv l++t+ +++l+
ENSGACP00000019223.1 621 TGLVYDSLMQKHQCMCGNTNSHPEHAGRIQSIWSRLQETGLRAQCECIRGRKASLEELQTVHSEAHVLLYGTNP--LRQKLDCkcsvtp 707
79***********************************************************************4..34445544578** PP
class-2.txt 85 .........ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkk 164
l+vdsd+i++e++s++aarlavG+v+elv+kv++gelkngfavvRPPGHHaeest+mGFC+fn+va+aakllqq+l+v+k
ENSGACP00000019223.1 708 mfvrlpcggLGVDSDTIWNEVHSSSAARLAVGSVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLSVNK 796
***************************************************************************************** PP
class-2.txt 165 ilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafr..evvlpi 248
ilivDwDvHhGnGtq++fy+dp+vlylS+HRyd+g+ffp gsga+devg+g+g+gfnvNva++ggl mgd eylaafr vv+pi
ENSGACP00000019223.1 797 ILIVDWDVHHGNGTQQAFYDDPNVLYLSIHRYDDGNFFP--GSGAPDEVGSGPGVGFNVNVAFTGGLdppMGDVEYLAAFRlrSVVMPI 883
***************************************..***************************************9889***** PP
class-2.txt 249 akeFkPdlvlvs.aGfDaaeg.dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322
a+e+ P+ s G D +eg pl g+++t kc+++lt+ql++lag rvvl+lEGG++l+ai++a+ea+v aLlg
ENSGACP00000019223.1 884 ANEYCPGTSCWSpPGLDGVEGhPPLSGYTLTSKCFGYLTRQLMTLAGSRVVLALEGGHDLTAICDASEACVAALLG 959
******99888846*******999**************************************************96 PP

  HDAC Class-I

           class-1.txt  17 gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae.....elskelkkf...nvgedc.Pvfd 96 
+++hp r++ + + + + gl + e ++ +kas eel+++hse+++ + + p ++ +++ + + ++g d+ + +
ENSGACP00000019223.1 639 TNSHPEHAGRIQSIWSRLQETGLRAQCECIRGRKASLEELQTVHSEAHVLLYGTN-PLRQKldckcSVTPMFVRLpcgGLGVDSdTIWN 726
5678888999999999999999999999999999999999999999988654333.222222333423323333212234444423666 PP
class-1.txt 97 glfey..cqlitGasleaakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellk..khkrvlyididlhhGDgveeaf 179
++++ ++l G+ +e + k+ ++e + a+ G hha s Gfcy n + +a l++ + +++l +d d+hhG+g ++af
ENSGACP00000019223.1 727 EVHSSsaARLAVGSVVELVFKVATGELKngFAVVRPPG-HHAEESTPMGFCYFNSVAIAAKLLQQrlSVNKILIVDWDVHHGNGTQQAF 814
66654114567788899999999887661255555555.*******************987776645789******************* PP
class-1.txt 180 yttdrvmtvsfhkyge.effPgtGdlsdvgaekgkyyavnvPlkdgid....Desyekif..ksviskvieafePeavvl.qcGaDsla 260
y v+ +s+h+y++ +ffPg+G ++vg + g + vnv ++ g+d D +y + f +sv+ ++ + + P + G D++
ENSGACP00000019223.1 815 YDDPNVLYLSIHRYDDgNFFPGSGAPDEVGSGPGVGFNVNVAFTGGLDppmgDVEYLAAFrlRSVVMPIANEYCPGTSCWsPPGLDGVE 903
**************9746************************9999876666899988873359999***9999976554146888887 PP
class-1.txt 261 gD.rlgefnlsikghaecvk 279
g +l+ + l+ k ++ +
ENSGACP00000019223.1 904 GHpPLSGYTLTSKCFGYLTR 923
65258888888887776555 PP

Protein Sequence
(Fasta)
CGVILYPCAV NQKQSPTLCL PPPHLAVDIN SALPLRLPPA AIPMDLRVGP RSPRPVSSRP 60
GRVWKIAASI IGATDQQQPT TNMIEVSLRQ KFERIAGSLE TLLWCFFPQQ QQELLALKHQ 120
QELLEHQRKM ENHRLEQELE KQQREQKLLL LKNKERGQES AVASTEVKMR LQEFVLNKKK 180
ALAQRSLNQG GLHNDAPYWY RKTQHSSLDQ SSPPQTGVST YNHPVLGVYN PRDDFPLRKT 240
ASEPNLKLRS RLKQKVSERR SSPLLRRRDS PITSAKKRSL DMADSACSSA PGSGPSSPNN 300
SSNNIPNENG ITASVANNTE ASLAQRLCGA ERGSVNQLSL YTSPSLPNIT LGLPATATST 360
AASNQEGGLQ PALSLSPPFL SGGHLTPYLA EAGAGTGGHG AHSPLLQHMV LMEQSPAQSP 420
LVTGSLPVFM SKGVSGLSMS PAASMAKLQR QHRPLGRTQS APLPQGSAAQ AHAQALALQQ 480
LHLNKMMTKP GESPGGRQHQ SHPEETEEEL REHQDGGALP PGVTIKQEPP DPQELQEEAL 540
QQHRERQAEQ ELLFRQQALL LEQQRIHQLR NYQASMEAAG LSLSFPAHRP LSRAQSSPAS 600
ASSFPISVPP PDPSAKPRFT TGLVYDSLMQ KHQCMCGNTN SHPEHAGRIQ SIWSRLQETG 660
LRAQCECIRG RKASLEELQT VHSEAHVLLY GTNPLRQKLD CKCSVTPMFV RLPCGGLGVD 720
SDTIWNEVHS SSAARLAVGS VVELVFKVAT GELKNGFAVV RPPGHHAEES TPMGFCYFNS 780
VAIAAKLLQQ RLSVNKILIV DWDVHHGNGT QQAFYDDPNV LYLSIHRYDD GNFFPGSGAP 840
DEVGSGPGVG FNVNVAFTGG LDPPMGDVEY LAAFRLRSVV MPIANEYCPG TSCWSPPGLD 900
GVEGHPPLSG YTLTSKCFGY LTRQLMTLAG SRVVLALEGG HDLTAICDAS EACVAALLGQ 960
ELDPLPKAVL EQRPNPNAVR SLEKVLETHS KYWGSLHRCS PLLGLSLLEA KRGDSEEAEA 1020
VSAMASLSVA NCNAMDQRPE EEPMEEEEPL
Nucleotide Sequence
(Fasta)
TGTGGTGTTA TTCTTTACCC CTGTGCTGTC AATCAAAAAC AATCACCAAC CCTATGTCTG 60
CCCCCCCCCC ACCTCGCAGT GGACATCAAC TCGGCGCTTC CCCTGCGTCT CCCTCCAGCC 120
GCCATCCCCA TGGACCTGCG CGTGGGTCCT CGCTCTCCCC GCCCGGTCAG CAGTCGCCCG 180
GGCCGGGTTT GGAAAATAGC GGCATCGATC ATTGGCGCCA CAGACCAACA GCAGCCGACA 240
ACAAATATGA TTGAAGTAAG TTTGCGACAA AAGTTTGAGC GTATCGCTGG AAGTTTGGAG 300
ACATTACTCT GGTGTTTCTT CCCGCAGCAA CAACAAGAGC TCCTGGCACT GAAGCACCAG 360
CAGGAGCTGC TGGAGCACCA GAGGAAGATG GAGAACCACC GTCTGGAGCA GGAGCTGGAG 420
AAACAGCAGA GGGAGCAGAA GCTGCTCCTG TTGAAGAACA AGGAGCGGGG CCAGGAGAGT 480
GCCGTGGCGA GCACCGAGGT GAAGATGCGG CTCCAGGAGT TTGTCCTGAA CAAGAAGAAG 540
GCCCTGGCCC AGCGCAGCCT CAACCAGGGG GGGCTCCACA ACGACGCCCC CTACTGGTAC 600
CGCAAAACCC AGCACAGCTC TCTGGACCAG AGCTCGCCAC CACAGACCGG CGTGTCCACC 660
TACAACCACC CCGTGCTCGG TGTCTACAAC CCCCGGGACG ACTTCCCCCT GCGGAAGACT 720
GCCTCGGAGC CCAACCTGAA GCTGCGCTCG CGGCTCAAGC AGAAGGTGAG CGAGCGGAGG 780
AGCAGTCCGC TGCTGCGGCG CCGAGACAGC CCCATCACCT CCGCCAAGAA GCGCTCGCTC 840
GACATGGCGG ACTCGGCGTG CAGCAGCGCC CCCGGCTCGG GCCCCAGTTC CCCGAATAAC 900
AGCTCCAACA ACATCCCCAA TGAGAACGGC ATCACCGCGT CAGTCGCCAA CAACACGGAG 960
GCGTCTCTGG CCCAGAGGCT GTGCGGCGCC GAGCGGGGCT CCGTGAACCA GCTGTCCCTC 1020
TACACTTCGC CGTCCTTGCC CAACATCACC CTGGGGCTGC CCGCCACGGC CACGTCCACC 1080
GCCGCGTCAA ACCAGGAGGG AGGTCTGCAG CCGGCCCTCT CCCTCAGCCC TCCCTTCCTC 1140
TCCGGCGGCC ACTTGACCCC TTACCTGGCC GAGGCCGGAG CGGGAACGGG CGGGCACGGC 1200
GCCCACAGTC CGCTGCTCCA ACACATGGTG CTCATGGAGC AGAGCCCAGC ACAGAGCCCC 1260
CTGGTGACAG GTAGTCTTCC TGTCTTCATG TCCAAAGGTG TGAGCGGCCT GTCCATGTCG 1320
CCGGCGGCGT CCATGGCCAA GCTGCAGCGG CAGCACCGGC CCCTGGGGCG GACCCAGTCG 1380
GCCCCGCTGC CCCAGGGGAG CGCCGCGCAG GCTCACGCCC AGGCCCTGGC CCTGCAGCAG 1440
CTGCACCTCA ACAAGATGAT GACCAAGCCC GGCGAGTCGC CCGGGGGCCG CCAGCACCAG 1500
AGCCACCCGG AGGAGACGGA GGAGGAGCTG AGGGAGCACC AGGACGGGGG AGCTCTGCCG 1560
CCGGGGGTCA CCATCAAGCA GGAGCCCCCC GACCCGCAGG AGCTGCAGGA GGAGGCGCTG 1620
CAGCAGCACA GGGAGCGGCA GGCGGAGCAG GAGCTGCTCT TCAGACAGCA GGCGTTGTTG 1680
TTGGAGCAGC AGCGGATTCA TCAGCTGAGG AACTATCAGG CCTCCATGGA GGCAGCCGGC 1740
CTGTCCCTCT CCTTCCCGGC ACACCGCCCC CTGTCCAGGG CCCAATCGTC TCCGGCCTCA 1800
GCCTCCTCTT TCCCCATCAG CGTCCCGCCC CCCGATCCGT CCGCCAAACC CCGCTTCACC 1860
ACAGGCCTGG TGTACGACTC GCTCATGCAG AAGCACCAGT GCATGTGTGG AAACACCAAC 1920
AGCCACCCGG AGCACGCCGG ACGCATCCAG AGCATCTGGT CTCGGCTGCA GGAGACGGGA 1980
CTCAGAGCGC AGTGTGAGTG TATCCGTGGG AGGAAGGCTT CTCTGGAGGA GCTGCAGACG 2040
GTTCACTCTG AAGCCCACGT CCTGCTGTAC GGGACCAACC CTCTCCGACA GAAACTGGAT 2100
TGTAAGTGTT CAGTCACCCC CATGTTCGTG CGTCTGCCGT GTGGAGGGTT GGGGGTGGAC 2160
AGCGACACCA TCTGGAACGA GGTCCACTCC TCCAGCGCCG CTCGACTCGC CGTCGGCTCG 2220
GTGGTGGAGC TGGTTTTCAA GGTGGCCACC GGGGAGCTGA AGAACGGTTT CGCTGTGGTC 2280
CGCCCTCCGG GACACCACGC CGAGGAGAGC ACCCCCATGG GCTTCTGCTA CTTTAACTCG 2340
GTGGCCATCG CGGCCAAGCT GCTGCAGCAG CGACTCAGCG TCAACAAGAT CCTCATCGTG 2400
GACTGGGACG TTCACCACGG CAACGGCACC CAGCAGGCCT TCTACGATGA CCCCAATGTC 2460
CTTTACCTGT CCATCCATCG CTACGACGAC GGCAACTTCT TCCCCGGGAG CGGAGCGCCA 2520
GACGAGGTGG GCAGCGGGCC TGGAGTCGGG TTCAACGTCA ACGTCGCCTT CACTGGAGGC 2580
CTCGATCCAC CCATGGGAGA CGTGGAGTAC CTGGCAGCCT TCAGACTCAG GTCAGTGGTG 2640
ATGCCCATAG CCAACGAGTA TTGCCCCGGA ACATCGTGCT GGTCTCCTCC CGGCTTAGAC 2700
GGCGTTGAAG GACACCCCCC GCTGAGCGGC TACACTTTGA CGTCCAAATG TTTCGGCTAT 2760
CTGACCAGGC AGCTGATGAC CCTCGCGGGG AGCCGGGTGG TCCTGGCTCT GGAGGGGGGT 2820
CACGACCTCA CCGCCATCTG CGACGCCTCC GAGGCCTGCG TGGCCGCCCT GCTGGGCCAG 2880
GAGCTGGACC CGCTGCCGAA GGCCGTCCTG GAGCAGAGGC CCAACCCCAA CGCTGTCCGC 2940
TCTCTGGAGA AAGTTTTAGA GACTCACAGT AAGTACTGGG GCTCGTTGCA CCGCTGCTCC 3000
CCGCTGCTGG GACTCTCTTT GCTGGAGGCC AAGCGAGGAG ACTCGGAGGA GGCGGAGGCC 3060
GTCAGCGCCA TGGCCTCTCT GTCTGTGGCC AACTGCAACG CCATGGATCA GAGGCCGGAG 3120
GAGGAACCCA TGGAGGAGGA GGAACCACTG TAACCGAGGG AAACGCGAGG GTGTCACACC 3180
GCTGCCATCG ACCTCACCGG AGACGGGTCT CGACTGATTC CCT 3224
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orn-0012 ENSONIP00000001222.1 Oreochromis niloticus 88 0.0 1333
WERAM-Pof-0042 ENSPFOP00000003781.2 Poecilia formosa 88 0.0 1311
WERAM-Tar-0171 ENSTRUP00000035900.1 Takifugu rubripes 86 0.0 1305
WERAM-Xim-0085 ENSXMAP00000008038.1 Xiphophorus maculatus 82 0.0 1303
WERAM-Ten-0099 ENSTNIP00000000138.1 Tetraodon nigroviridis 87 0.0 1292
WERAM-Dar-0198 ENSDARP00000131327.1 Danio rerio 70 0.0 1133
WERAM-Leo-0082 ENSLOCP00000011105.1 Lepisosteus oculatus 67 0.0 1093
WERAM-Gaga-0049 ENSGALP00000033098.3 Gallus gallus 69 0.0 1056
WERAM-Fia-0056 ENSFALP00000004005.1 Ficedula albicollis 69 0.0 1055
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 69 0.0 1054
WERAM-Tag-0050 ENSTGUP00000003338.1 Taeniopygia guttata 65 0.0 1051
WERAM-Myl-0159 ENSMLUP00000013297.2 Myotis lucifugus 68 0.0 1044
WERAM-Cap-0143 ENSCPOP00000011770.2 Cavia porcellus 69 0.0 1040
WERAM-Fec-0140 ENSFCAP00000013207.3 Felis catus 70 0.0 1040
WERAM-Mup-0001 ENSMPUP00000000123.1 Mustela putorius furo 70 0.0 1039
WERAM-Chs-0068 ENSCSAP00000002314.1 Chlorocebus sabaeus 68 0.0 1039
WERAM-Aim-0131 ENSAMEP00000011965.1 Ailuropoda melanoleuca 69 0.0 1038
WERAM-Pat-0104 ENSPTRP00000022412.3 Pan troglodytes 68 0.0 1037
WERAM-Caf-0133 ENSCAFP00000018541.3 Canis familiaris 70 0.0 1037
WERAM-Hos-0025 ENSP00000264606.3 Homo sapiens 68 0.0 1037
WERAM-Lac-0062 ENSLACP00000008432.1 Latimeria chalumnae 64 0.0 1035
WERAM-Bot-0159 ENSBTAP00000023621.5 Bos taurus 68 0.0 1035
WERAM-Ict-0095 ENSSTOP00000009983.2 Ictidomys tridecemlineatus 69 0.0 1034
WERAM-Pes-0174 ENSPSIP00000020522.1 Pelodiscus sinensis 65 0.0 1031
WERAM-Sus-0169 ENSSSCP00000025173.1 Sus scrofa 68 0.0 1031
WERAM-Ran-0135 ENSRNOP00000027622.5 Rattus norvegicus 69 0.0 1026
WERAM-Asm-0146 ENSAMXP00000013789.1 Astyanax mexicanus 66 0.0 1022
WERAM-Anp-0035 ENSAPLP00000004005.1 Anas platyrhynchos 69 0.0 1019
WERAM-Mum-0077 ENSMUSP00000008995.8 Mus musculus 69 0.0 1017
WERAM-Anc-0099 ENSACAP00000009498.3 Anolis carolinensis 68 0.0 1006
WERAM-Meg-0023 ENSMGAP00000001752.2 Meleagris gallopavo 69 0.0 998
WERAM-Xet-0035 ENSXETP00000010592.2 Xenopus tropicalis 62 0.0 991
WERAM-Gog-0157 ENSGGOP00000013985.2 Gorilla gorilla 67 0.0 985
WERAM-Loa-0107 ENSLAFP00000009167.2 Loxodonta africana 66 0.0 983
WERAM-Otg-0061 ENSOGAP00000004404.2 Otolemur garnettii 63 0.0 977
WERAM-Dan-0037 ENSDNOP00000003826.3 Dasypus novemcinctus 66 0.0 969
WERAM-Gam-0063 ENSGMOP00000006368.1 Gadus morhua 65 0.0 945
WERAM-Poa-0116 ENSPPYP00000014905.2 Pongo abelii 65 0.0 941
WERAM-Mam-0041 ENSMMUP00000007984.2 Macaca mulatta 64 0.0 939
WERAM-Ova-0200 ENSOARP00000020106.1 Ovis aries 65 0.0 925
WERAM-Dio-0038 ENSDORP00000004330.1 Dipodomys ordii 59 0.0 802
WERAM-Paa-0012 ENSPANP00000003104.1 Papio anubis 68 0.0 777
WERAM-Caj-0101 ENSCJAP00000017313.2 Callithrix jacchus 68 0.0 772
WERAM-Tut-0038 ENSTTRP00000002947.1 Tursiops truncatus 64 0.0 704
WERAM-Orla-0199 ENSORLP00000022663.1 Oryzias latipes 78 0.0 697
WERAM-Mod-0016 ENSMODP00000001749.3 Monodelphis domestica 51 0.0 696
WERAM-Ptv-0156 ENSPVAP00000012934.1 Pteropus vampyrus 71 7e-175 612
WERAM-Pem-0041 ENSPMAP00000005402.1 Petromyzon marinus 63 7e-175 612
WERAM-Orc-0081 ENSOCUP00000007421.3 Oryctolagus cuniculus 71 6e-168 589
WERAM-Eqc-0174 ENSECAP00000019543.1 Equus caballus 71 9e-168 588
WERAM-Prc-0092 ENSPCAP00000008303.1 Procavia capensis 71 2e-167 587
WERAM-Ocp-0087 ENSOPRP00000007869.2 Ochotona princeps 71 2e-167 587
WERAM-Sah-0025 ENSSHAP00000002837.1 Sarcophilus harrisii 71 4e-164 576
WERAM-Nol-0194 ENSNLEP00000021748.1 Nomascus leucogenys 71 7e-164 575
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 69 9e-162 568
WERAM-Mae-0089 ENSMEUP00000008883.1 Macropus eugenii 72 2e-158 557
WERAM-Mim-0022 ENSMICP00000002393.1 Microcebus murinus 69 1e-157 554
WERAM-Ere-0042 ENSEEUP00000003697.1 Erinaceus europaeus 71 2e-156 550
WERAM-Soa-0055 ENSSARP00000005400.1 Sorex araneus 62 9e-143 505
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 68 4e-138 490
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 57 4e-137 486
WERAM-Ect-0082 ENSETEP00000009275.1 Echinops telfairi 59 5e-127 453
WERAM-Tub-0137 ENSTBEP00000014805.1 Tupaia belangeri 70 1e-112 405
WERAM-Cii-0046 ENSCINP00000016829.3 Ciona intestinalis 49 1e-111 402
WERAM-Cae-0008 C10E2.3a Caenorhabditis elegans 50 7e-111 399
WERAM-Chh-0086 ENSCHOP00000009630.1 Choloepus hoffmanni 62 4e-107 387
WERAM-Cis-0060 ENSCSAVP00000013851.1 Ciona savignyi 54 1e-78 292
WERAM-Bro-0168 Bo9g014470.1 Brassica oleracea 42 5e-71 267
WERAM-Brr-0181 Bra035942.1-P Brassica rapa 43 6e-71 266
WERAM-Sem-0010 EFJ19764 Selaginella moellendorffii 42 1e-70 266
WERAM-Arl-0149 scaffold_802745.1 Arabidopsis lyrata 41 1e-68 259
Created Date 25-Jun-2016