WERAM Information


Tag Content
WERAM ID WERAM-Pof-0042
Ensembl Protein ID ENSPFOP00000003781.2
Gene Name hdac4
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSPFOG00000003302.2 ENSPFOT00000003789.2 ENSPFOP00000003781.2
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 5.00e-150 499.7 66 949
HDAC Class-I 3.10e-31 109.7 633 915
Organism Poecilia formosa
Domain Profile
  HDAC Class-II

           class-2.txt  23 hpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletae.klekeelesltvd 88 
++ + i + ++ ++ ++++ + k+++e l+l H++e++e+ ++ e + ++ele+++ +
ENSPFOP00000003781.2 66 QIQRQILIAEFQRQHEQLSRQHEVQLQEHIKQQQELLALKHQQELLEHQRKMEnHRLEQELEKQQRE 132
4443333333333333333333444444466667777778888888888877767777777774433 PP
class-2.txt 47 eelkarkatkeelqlvHseehvelletae..klekeele 83
+el++ + +ee+++ H e+ ell +++ le+++++
ENSPFOP00000003781.2 523 QELQELQELQEEVLQQHREREQELLFRQQalLLEQQRIH 561
455566666677777776665555544442344444444 PP
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles...... 84
+glvyd+ m khq++++n+++hpE+++Riq+i+srlqe+gl+ ++e++++rkat+eelq+vHse+hv l++t+ +++l+
ENSPFOP00000003781.2 615 TGLVYDSLMQKHQCMCGNTNSHPEHAGRIQSIWSRLQETGLRAQCECIRGRKATLEELQTVHSEAHVLLYGTN--PLRQKLDCsitpmf 701
79***********************************************************************..445556555688** PP
class-2.txt 85 .......ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkil 166
++vdsd+i++e++s++aarlavG+v+elv+kv++gelkngfavvRPPGHHaeest+mGFC+fn+va+aakllqq+l+v+kil
ENSPFOP00000003781.2 702 vrlpcggVGVDSDTIWNEVHSSSAARLAVGSVVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLSVSKIL 790
***************************************************************************************** PP
class-2.txt 167 ivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafrevvlpiakeF 252
ivDwDvHhGnGtq++fy+dp+vly+S+HRyd+g+ffp gsga+devg+g+g+gfnvNva++ggl mgdaeylaafr vv+pia+eF
ENSPFOP00000003781.2 791 IVDWDVHHGNGTQQAFYDDPNVLYVSIHRYDDGNFFP--GSGAPDEVGSGPGVGFNVNVAFTGGLdppMGDAEYLAAFRSVVMPIADEF 877
*************************************..************************************************** PP
class-2.txt 253 kPdlvlvsaGfDaaeg..dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322
+Pd+vlvs+GfDa+eg plgg+++t kc+++lt+ql++laggrvvl+lEGG++l+ai++a+ea+v aLlg
ENSPFOP00000003781.2 878 APDIVLVSSGFDAVEGhpPPLGGYTLTSKCFGYLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVAALLG 949
****************9999**************************************************96 PP

  HDAC Class-I

           class-1.txt  17 gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae...elskelkkf...nvgedc.Pvfdgl 98 
+++hp r++ + + + + gl + e ++ +ka+ eel+++hse+++ + + +p ++ +++ + + +vg d+ + +++
ENSPFOP00000003781.2 633 TNSHPEHAGRIQSIWSRLQETGLRAQCECIRGRKATLEELQTVHSEAHVLLYGT-NPLRQKldcSITPMFVRLpcgGVGVDSdTIWNEV 720
56899999999999999999*************************999865433.2222222234443444432225666652366777 PP
class-1.txt 99 fey..cqlitGasleaakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellk..khkrvlyididlhhGDgveeafyt 181
++ ++l G+ +e + k+ ++e + a+ G hha s Gfcy n + +a l++ + +++l +d d+hhG+g ++afy
ENSPFOP00000003781.2 721 HSSsaARLAVGSVVELVFKVATGELKngFAVVRPPG-HHAEESTPMGFCYFNSVAIAAKLLQQrlSVSKILIVDWDVHHGNGTQQAFYD 808
654115567888999999999887662255555555.*******************987777645789********************* PP
class-1.txt 182 tdrvmtvsfhkyge.effPgtGdlsdvgaekgkyyavnvPlkdgid....DesyekifksviskvieafePeavvlqcGaDslagD..r 263
v+ vs+h+y++ +ffPg+G ++vg + g + vnv ++ g+d D +y + f+sv+ ++ + f P++v++ G D++ g +
ENSPFOP00000003781.2 809 DPNVLYVSIHRYDDgNFFPGSGAPDEVGSGPGVGFNVNVAFTGGLDppmgDAEYLAAFRSVVMPIADEFAPDIVLVSSGFDAVEGHppP 897
************9746************************99998766669********************************997336 PP
class-1.txt 264 lgefnlsikghaecvkfv 281
lg + l+ k ++ + +
ENSPFOP00000003781.2 898 LGGYTLTSKCFGYLTRQL 915
9******99988765554 PP

Protein Sequence
(Fasta)
SVDINSALPL RLPPAAIPMD LRVDHHHHQQ QHQQVSSLSP TGQLSPSSLR EQQLQQELLA 60
LKQKQQIQRQ ILIAEFQRQH EQLSRQHEVQ LQEHIKQQQE LLALKHQQEL LEHQRKMENH 120
RLEQELEKQQ REQKLQLLKN KERGQESAVA STEVKMRLQE FVLNKKKALA QRSLNQGGLP 180
NDAPYWYRKT QHSSLDQSSP PQTTVSTYNH PVLGVYNPRD DFPLRKTASE PNLKLRSRLK 240
QKVSERRSSP LLRRRDSPIT TAKKRSLDMA DSACSSAPGS GPSSPNNSSN NIPNENGITV 300
SVSNNMEASL AQRLCGGDQG SINQLSLYTS PSLPNITLGL PATATATAAS NVTSAQQDAG 360
LQPALSLSPP FLSGGHLSPY LADGGSGGHG AHSPLLQHMV LMDQSPAQSP LVTASPGVSG 420
MSMSSASMAK LQRQHRPLGR TQSAPLPQGS AAQAHAQALA PHRQDYETVV LRFPQMMGKP 480
GESPVGRQHQ SHPEETEEEL REHQDAGALP PGVTIKQEPP DPQELQELQE LQEEVLQQHR 540
EREQELLFRQ QALLLEQQRI HQLRNYQASM EAAGMTMSFP GHRPLSRAQS SPASASSFPI 600
SVPSQDPPAK PRFTTGLVYD SLMQKHQCMC GNTNSHPEHA GRIQSIWSRL QETGLRAQCE 660
CIRGRKATLE ELQTVHSEAH VLLYGTNPLR QKLDCSITPM FVRLPCGGVG VDSDTIWNEV 720
HSSSAARLAV GSVVELVFKV ATGELKNGFA VVRPPGHHAE ESTPMGFCYF NSVAIAAKLL 780
QQRLSVSKIL IVDWDVHHGN GTQQAFYDDP NVLYVSIHRY DDGNFFPGSG APDEVGSGPG 840
VGFNVNVAFT GGLDPPMGDA EYLAAFRSVV MPIADEFAPD IVLVSSGFDA VEGHPPPLGG 900
YTLTSKCFGY LTRQLMTLAG GRVVLALEGG HDLTAICDAS EACVAALLGQ ELDPLPKAIL 960
EQRPNPNAVR SLEKVIETHS KYWRSVHRYS SRLGLSLLEA KRGDSEEAEA VSAMASLSVA 1020
NTNTMDQSRA EEEPMEEEAP L 1041
Nucleotide Sequence
(Fasta)
TCAGTGGACA TTAACTCTGC GCTGCCCCTG CGTCTGCCCC CTGCTGCCAT CCCCATGGAC 60
CTGCGTGTGG ACCACCACCA CCACCAGCAG CAGCACCAGC AGGTGTCGTC GCTCTCCCCG 120
ACGGGCCAGC TCTCACCCAG CTCCCTGCGC GAGCAGCAGC TGCAGCAGGA GCTGCTGGCC 180
CTGAAGCAGA AGCAGCAGAT CCAGAGGCAG ATCCTGATCG CCGAGTTCCA GCGGCAGCAC 240
GAGCAGCTGT CCCGCCAGCA TGAGGTCCAG CTCCAGGAGC ACATTAAGCA GCAACAGGAG 300
CTGCTGGCCC TGAAGCACCA GCAGGAGTTG CTGGAGCACC AGAGGAAGAT GGAGAACCAC 360
CGGCTGGAGC AGGAGCTGGA GAAGCAGCAG AGGGAGCAGA AGCTGCAGCT GCTGAAGAAC 420
AAGGAGCGGG GCCAGGAGAG TGCCGTGGCC AGCACCGAGG TGAAGATGCG TCTGCAGGAG 480
TTCGTCCTGA ACAAAAAGAA GGCGCTGGCC CAGCGGAGCC TCAACCAGGG CGGCCTCCCC 540
AACGACGCCC CCTACTGGTA CCGAAAAACC CAGCATAGCT CTCTGGACCA GAGCTCGCCT 600
CCACAAACCA CAGTGTCCAC CTACAATCAC CCGGTGCTGG GCGTCTACAA CCCTCGGGAC 660
GACTTCCCGC TGCGAAAGAC TGCCTCGGAG CCCAACCTGA AGCTGCGCTC CCGGCTGAAG 720
CAGAAAGTGA GCGAGCGCCG CAGCAGCCCG CTGCTCCGCC GCAGAGACAG CCCCATCACT 780
ACGGCCAAAA AGCGTTCCCT CGACATGGCG GACTCGGCGT GCAGCAGTGC CCCCGGCTCC 840
GGCCCCAGCT CCCCGAACAA CAGCTCCAAC AACATCCCCA ACGAGAACGG CATCACTGTG 900
TCCGTCTCCA ACAACATGGA GGCGTCTCTG GCCCAGCGGC TGTGCGGCGG CGATCAGGGC 960
TCCATCAACC AGCTGTCCCT CTACACCTCG CCGTCCCTCC CCAACATCAC CTTGGGGCTG 1020
CCCGCCACTG CCACAGCCAC CGCTGCCTCC AACGTGACTT CCGCTCAGCA GGATGCAGGC 1080
CTGCAACCAG CCCTCTCCCT CAGCCCCCCC TTCCTTTCCG GTGGCCATTT GAGCCCCTAC 1140
CTCGCAGACG GCGGGTCCGG TGGCCACGGC GCTCACAGCC CCCTGCTGCA GCACATGGTT 1200
CTGATGGACC AGAGTCCCGC TCAGAGCCCA CTGGTGACAG CGTCCCCAGG CGTCAGCGGC 1260
ATGTCCATGT CGTCGGCCTC CATGGCCAAG CTGCAGCGGC AGCACCGGCC CCTGGGGCGG 1320
ACCCAGTCGG CGCCGCTGCC CCAGGGGAGC GCCGCCCAGG CCCACGCTCA GGCCCTGGCC 1380
CCTCATCGTC AAGATTATGA AACTGTTGTC TTGCGTTTTC CGCAGATGAT GGGGAAGCCT 1440
GGCGAGTCGC CCGTGGGTCG GCAGCACCAG AGCCACCCGG AGGAGACGGA GGAGGAGCTG 1500
AGGGAGCACC AGGACGCCGG GGCCCTGCCG CCCGGGGTCA CCATCAAGCA GGAGCCGCCG 1560
GACCCGCAGG AGCTGCAGGA GCTGCAGGAG CTGCAGGAGG AGGTGCTGCA GCAGCACCGC 1620
GAGCGCGAGC AGGAGCTGCT CTTCAGACAG CAGGCTCTGC TGTTGGAGCA GCAGCGGATT 1680
CACCAGCTGA GGAACTACCA GGCGTCCATG GAGGCCGCCG GCATGACCAT GTCCTTCCCC 1740
GGACACAGAC CCCTGTCCAG GGCGCAGTCG TCTCCGGCCT CGGCGTCGTC CTTCCCCATC 1800
AGCGTCCCCT CGCAGGATCC CCCCGCCAAG CCTCGCTTCA CCACAGGCCT TGTGTACGAC 1860
TCCCTGATGC AGAAGCACCA GTGCATGTGC GGAAACACCA ACAGCCATCC GGAGCACGCC 1920
GGGCGCATCC AGAGCATCTG GTCCCGGCTG CAGGAGACCG GACTCCGAGC TCAGTGCGAG 1980
TGTATCCGTG GGAGAAAGGC CACTCTGGAG GAGCTGCAGA CGGTCCACTC CGAAGCCCAC 2040
GTCCTGCTGT ACGGGACCAA CCCACTCCGG CAGAAACTCG ACTGTTCCAT AACACCCATG 2100
TTCGTTCGGC TGCCGTGCGG AGGAGTGGGG GTGGACAGCG ACACCATCTG GAACGAGGTC 2160
CACTCGTCCA GCGCGGCGCG GCTCGCCGTC GGCTCCGTCG TGGAGCTGGT CTTCAAGGTG 2220
GCAACTGGAG AGCTAAAGAA CGGTTTTGCA GTGGTCCGCC CTCCTGGACA CCACGCCGAG 2280
GAAAGCACCC CCATGGGCTT CTGCTACTTC AACTCGGTGG CCATCGCAGC CAAACTGCTG 2340
CAGCAGAGAC TCAGCGTCAG CAAGATCCTC ATCGTGGACT GGGATGTTCA CCATGGCAAC 2400
GGCACCCAGC AGGCTTTCTA CGACGACCCT AATGTCCTTT ACGTCTCTAT CCATCGCTAC 2460
GACGATGGCA ACTTTTTTCC AGGAAGTGGA GCGCCCGATG AGGTGGGGAG CGGTCCAGGG 2520
GTGGGCTTTA ATGTCAATGT GGCCTTCACT GGGGGCCTGG ACCCCCCCAT GGGAGACGCA 2580
GAATACCTGG CTGCCTTCAG GTCTGTGGTG ATGCCGATAG CCGACGAGTT CGCTCCGGAC 2640
ATCGTGCTGG TCTCCTCCGG CTTCGACGCC GTGGAGGGAC ACCCCCCACC GCTGGGCGGC 2700
TACACCCTGA CCTCCAAATG TTTTGGGTAT CTGACCAGGC AGCTGATGAC CCTCGCTGGA 2760
GGCCGGGTGG TCCTGGCGTT GGAGGGAGGT CACGACCTCA CCGCCATCTG TGACGCCTCT 2820
GAGGCCTGCG TTGCCGCCCT GCTCGGGCAG GAGCTGGATC CGCTTCCAAA GGCCATCCTG 2880
GAGCAGAGGC CCAACCCCAA CGCCGTGCGT TCTCTGGAGA AAGTCATAGA GACTCACAGT 2940
AAGTACTGGC GCTCGGTGCA TCGCTACTCA TCGCGGCTGG GGCTCTCTCT GCTGGAGGCC 3000
AAGCGAGGCG ACTCGGAGGA GGCCGAGGCC GTCAGCGCCA TGGCGTCTCT GTCCGTCGCC 3060
AACACCAACA CCATGGATCA AAGCAGGGCG GAGGAGGAGC CCATGGAGGA GGAGGCTCCG 3120
CTGTAA 3127
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Xim-0085 ENSXMAP00000008038.1 Xiphophorus maculatus 92 0.0 1441
WERAM-Orn-0012 ENSONIP00000001222.1 Oreochromis niloticus 88 0.0 1397
WERAM-Tar-0171 ENSTRUP00000035900.1 Takifugu rubripes 85 0.0 1369
WERAM-Ten-0099 ENSTNIP00000000138.1 Tetraodon nigroviridis 84 0.0 1356
WERAM-Gaa-0148 ENSGACP00000019223.1 Gasterosteus aculeatus 85 0.0 1283
WERAM-Dar-0198 ENSDARP00000131327.1 Danio rerio 76 0.0 1183
WERAM-Leo-0082 ENSLOCP00000011105.1 Lepisosteus oculatus 72 0.0 1139
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 72 0.0 1101
WERAM-Gaga-0049 ENSGALP00000033098.3 Gallus gallus 72 0.0 1100
WERAM-Asm-0146 ENSAMXP00000013789.1 Astyanax mexicanus 69 0.0 1097
WERAM-Fec-0140 ENSFCAP00000013207.3 Felis catus 71 0.0 1090
WERAM-Tag-0050 ENSTGUP00000003338.1 Taeniopygia guttata 71 0.0 1089
WERAM-Cap-0143 ENSCPOP00000011770.2 Cavia porcellus 71 0.0 1089
WERAM-Ict-0095 ENSSTOP00000009983.2 Ictidomys tridecemlineatus 71 0.0 1088
WERAM-Myl-0159 ENSMLUP00000013297.2 Myotis lucifugus 71 0.0 1086
WERAM-Bot-0159 ENSBTAP00000023621.5 Bos taurus 71 0.0 1086
WERAM-Mup-0001 ENSMPUP00000000123.1 Mustela putorius furo 71 0.0 1085
WERAM-Aim-0131 ENSAMEP00000011965.1 Ailuropoda melanoleuca 71 0.0 1083
WERAM-Pat-0104 ENSPTRP00000022412.3 Pan troglodytes 71 0.0 1083
WERAM-Chs-0068 ENSCSAP00000002314.1 Chlorocebus sabaeus 71 0.0 1082
WERAM-Hos-0025 ENSP00000264606.3 Homo sapiens 71 0.0 1082
WERAM-Sus-0169 ENSSSCP00000025173.1 Sus scrofa 70 0.0 1081
WERAM-Caf-0133 ENSCAFP00000018541.3 Canis familiaris 71 0.0 1081
WERAM-Ran-0135 ENSRNOP00000027622.5 Rattus norvegicus 71 0.0 1081
WERAM-Lac-0062 ENSLACP00000008432.1 Latimeria chalumnae 69 0.0 1080
WERAM-Pes-0174 ENSPSIP00000020522.1 Pelodiscus sinensis 71 0.0 1078
WERAM-Mum-0077 ENSMUSP00000008995.8 Mus musculus 71 0.0 1077
WERAM-Anp-0035 ENSAPLP00000004005.1 Anas platyrhynchos 69 0.0 1058
WERAM-Fia-0056 ENSFALP00000004005.1 Ficedula albicollis 71 0.0 1052
WERAM-Loa-0107 ENSLAFP00000009167.2 Loxodonta africana 67 0.0 1046
WERAM-Gam-0063 ENSGMOP00000006368.1 Gadus morhua 68 0.0 1037
WERAM-Xet-0035 ENSXETP00000010592.2 Xenopus tropicalis 67 0.0 1033
WERAM-Otg-0061 ENSOGAP00000004404.2 Otolemur garnettii 67 0.0 1031
WERAM-Gog-0157 ENSGGOP00000013985.2 Gorilla gorilla 67 0.0 1024
WERAM-Dan-0037 ENSDNOP00000003826.3 Dasypus novemcinctus 68 0.0 1019
WERAM-Anc-0099 ENSACAP00000009498.3 Anolis carolinensis 63 0.0 1004
WERAM-Meg-0023 ENSMGAP00000001752.2 Meleagris gallopavo 70 0.0 1002
WERAM-Poa-0116 ENSPPYP00000014905.2 Pongo abelii 67 0.0 986
WERAM-Mam-0041 ENSMMUP00000007984.2 Macaca mulatta 67 0.0 979
WERAM-Dio-0038 ENSDORP00000004330.1 Dipodomys ordii 61 0.0 840
WERAM-Paa-0012 ENSPANP00000003104.1 Papio anubis 71 0.0 797
WERAM-Caj-0101 ENSCJAP00000017313.2 Callithrix jacchus 71 0.0 790
WERAM-Orla-0199 ENSORLP00000022663.1 Oryzias latipes 81 0.0 749
WERAM-Ova-0200 ENSOARP00000020106.1 Ovis aries 82 0.0 745
WERAM-Tut-0038 ENSTTRP00000002947.1 Tursiops truncatus 85 0.0 722
WERAM-Pem-0041 ENSPMAP00000005402.1 Petromyzon marinus 69 0.0 654
WERAM-Ptv-0156 ENSPVAP00000012934.1 Pteropus vampyrus 74 0.0 654
WERAM-Eqc-0174 ENSECAP00000019543.1 Equus caballus 74 2e-180 630
WERAM-Orc-0081 ENSOCUP00000007421.3 Oryctolagus cuniculus 74 2e-180 630
WERAM-Prc-0092 ENSPCAP00000008303.1 Procavia capensis 74 7e-180 628
WERAM-Ocp-0087 ENSOPRP00000007869.2 Ochotona princeps 74 2e-179 627
WERAM-Mod-0095 ENSMODP00000032765.2 Monodelphis domestica 74 2e-179 627
WERAM-Sah-0025 ENSSHAP00000002837.1 Sarcophilus harrisii 74 2e-176 617
WERAM-Nol-0194 ENSNLEP00000021748.1 Nomascus leucogenys 75 3e-175 613
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 71 3e-174 610
WERAM-Mim-0022 ENSMICP00000002393.1 Microcebus murinus 72 5e-169 592
WERAM-Ere-0042 ENSEEUP00000003697.1 Erinaceus europaeus 74 2e-167 587
WERAM-Mae-0085 ENSMEUP00000008564.1 Macropus eugenii 72 3e-166 583
WERAM-Soa-0055 ENSSARP00000005400.1 Sorex araneus 65 7e-156 549
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 61 2e-151 534
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 71 7e-149 525
WERAM-Ect-0082 ENSETEP00000009275.1 Echinops telfairi 60 3e-137 487
WERAM-Cii-0046 ENSCINP00000016829.3 Ciona intestinalis 53 5e-124 443
WERAM-Tub-0137 ENSTBEP00000014805.1 Tupaia belangeri 74 3e-123 441
WERAM-Cae-0008 C10E2.3a Caenorhabditis elegans 52 4e-121 433
WERAM-Chh-0086 ENSCHOP00000009630.1 Choloepus hoffmanni 63 2e-115 414
WERAM-Cis-0060 ENSCSAVP00000013851.1 Ciona savignyi 58 7e-90 329
WERAM-Sem-0010 EFJ19764 Selaginella moellendorffii 45 6e-81 300
WERAM-Bro-0168 Bo9g014470.1 Brassica oleracea 45 4e-80 297
WERAM-Brr-0181 Bra035942.1-P Brassica rapa 45 4e-80 297
Created Date 25-Jun-2016