WERAM Information


Tag Content
WERAM ID WERAM-Cii-0046
Ensembl Protein ID ENSCINP00000016829.3
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSCING00000008243.3 ENSCINT00000016829.3 ENSCINP00000016829.3
ENSCING00000008243.3 ENSCINT00000033973.1 ENSCINP00000033795.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 7.60e-118 393.2 30 957
HDAC Class-I 1.10e-28 100.5 54 940
Organism Ciona intestinalis
Domain Profile
  HDAC Class-II

           class-2.txt  6 ydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHsee 66
y++ l+hq +++ + + Ri+ ++++ +++ + e+++a +++e +++v ++e
ENSCINP00000016829.3 30 YQTSNLQHQHQLQQH-LNITNEIRISVCSKHVISKQRERVAEQMAALDQRSELINSVRNKE 89
455555555444444.333344444444444444444444444444444444444443332 PP
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeaglle...........kleelkarkatkeelqlvHseehvelletaeklek 79
+g+ y++ mlkh + ++++ h E+++R++ai++rl++++l++ ++e l+arkat++elqlvH++eh+ +++t+ +l +
ENSCINP00000016829.3 602 TGIAYSPVMLKHGCACRDD--HTEHAGRLRAIWERLTKSKLVNdpscggtsgksSCELLEARKATTDELQLVHTQEHTLRYGTT-SLAR 687
789**************99..**********************999999999888*****************************.8888 PP
class-2.txt 80 eeles......................ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClf 146
+el + + d d++++e ++i+aar+avG++++ + +v++++lkngfa+vRPPGHHa+++ am FC+f
ENSCINP00000016829.3 688 KELGEkllcqeltskfivlpcggvgvdNGIDIDTVWNELDTINAARMAVGCTVDITLEVAQNRLKNGFALVRPPGHHAQKDLAMAFCYF 776
8888889*******************999************************************************************ PP
class-2.txt 147 nnvavaakllqqklk..vkkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl.. 231
n+vavaa+ lq++ + v+++livDwDvHh nGtq+if +dp+vl +S+HRyd+g+ffp g+ga++e+g+g g+g+nvN+ ++ggl
ENSCINP00000016829.3 777 NSVAVAARKLQHECPdtVRRVLIVDWDVHHCNGTQNIFFDDPSVLVISIHRYDSGNFFP--GTGAINECGRGGGLGYNVNIGFSGGLdp 863
*************9889******************************************..**************************** PP
class-2.txt 232 .mgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaeg..dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavv 317
m da+yla+fr++vlpia++F+P++vlvs+Gf aa+g ++lgg+++t++cy+ lt+ l+++agg++vlvlEGG++l+ +++++ea+v
ENSCINP00000016829.3 864 pMEDADYLAVFRTIVLPIARQFDPHFVLVSCGFSAANGhpSTLGGYKLTPNCYGLLTRLLSEVAGGKIVLVLEGGFELEPLCDCTEACV 952
**************************************88889********************************************** PP
class-2.txt 318 kaLlg 322
++Llg
ENSCINP00000016829.3 953 RTLLG 957
***96 PP

  HDAC Class-I

           class-1.txt 15 hygqkhpmkpkrlsltheLvlnyglskkleivkpkkasae 54
++++kh++ ++r +++++++ + s+ ++ v+ k++++e
ENSCINP00000016829.3 54 SVCSKHVISKQRERVAEQMAALDQRSELINSVRNKEKNRE 93
2233444444444444444333333333333333333333 PP
class-1.txt 131 lhhakkseasGfcyvnDivlailellk....khkrvlyididlhhGDgveeafyttdrvmtvsfhkyge.effPgtGdlsdvgaekgky 214
hha+k+ a fcy n + +a +l++ + +rvl +d d+hh +g ++ f v+ +s+h+y+ +ffPgtG +++ g + g
ENSCINP00000016829.3 762 GHHAQKDLAMAFCYFNSVAVAARKLQHecpdTVRRVLIVDWDVHHCNGTQNIFFDDPSVLVISIHRYDSgNFFPGTGAINECGRGGGLG 850
4************************984444578*********************************8636****************** PP
class-1.txt 215 yavnvPlkdgid....DesyekifksviskvieafePeavvlqcGaDslagDr..lgefnlsikghaecvkfvksf.nlpllvlGGGGY 296
y vn+ ++ g+d D y ++f++++ ++ + f+P+ v++ cG + +g + lg ++l+ + ++ +++ + +++++ GG+
ENSCINP00000016829.3 851 YNVNIGFSGGLDppmeDADYLAVFRTIVLPIARQFDPHFVLVSCGFSAANGHPstLGGYKLTPNCYGLLTRLLSEVaGGKIVLVLEGGF 939
*****99988644444*****************************98888764339*********999999998885455555555666 PP
class-1.txt 297 t 297

ENSCINP00000016829.3 940 E 940
5 PP

Protein Sequence
(Fasta)
MGERQYQEKL KRMRHQHEIE NQLLMAQFNY QTSNLQHQHQ LQQHLNITNE IRISVCSKHV 60
ISKQRERVAE QMAALDQRSE LINSVRNKEK NREKTGAVAS NAVKQHLQKF VKCRQKFKDS 120
HPSMERLLHI SPGGNYLACF TYVVTHRSPL QWTPSLEGKN GGHEVPAHYS SLLHTQYDFP 180
LRKTASEPNL KLKSRLKQKL LEDRVERSSP LMPRRGDIKA DLANRIKKKI NIENVNEQRN 240
SHNSAPNSGP SSPPNSSNDI KQSTPHMQTE FYNQQTDYYE ESNSSGNHDL YSSPSLPNIS 300
IGLTNKKSTD RSMLVVSEEL SKRGTRGSSL SDPMIQSDKP LFQSHDRTVA AIINKTFLVY 360
VFMHQHFTAK LHEIDLTQAV QANLLPPHKT VLHGTYHLCT QASTPPGPIR HSQTTRQHKA 420
LSRTQSAPTA ASQLQLHILQ LKRRQKMLQQ QQKKGLMHGV AEVDSHSYSI LPTHLETEDG 480
EQWVKRNQYS HAQSTPNQPF IPSNKIASTQ AQLVASKPEI PDSMLPMFIN KHSGSSFYNK 540
PTQEEGGIAG TRHLPPQSTI PIHSQPSSLS DQNKPRLLRT QSSPATSFIK KLPHFKKYRY 600
TTGIAYSPVM LKHGCACRDD HTEHAGRLRA IWERLTKSKL VNDPSCGGTS GKSSCELLEA 660
RKATTDELQL VHTQEHTLRY GTTSLARKEL GEKLLCQELT SKFIVLPCGG VGVDNGIDID 720
TVWNELDTIN AARMAVGCTV DITLEVAQNR LKNGFALVRP PGHHAQKDLA MAFCYFNSVA 780
VAARKLQHEC PDTVRRVLIV DWDVHHCNGT QNIFFDDPSV LVISIHRYDS GNFFPGTGAI 840
NECGRGGGLG YNVNIGFSGG LDPPMEDADY LAVFRTIVLP IARQFDPHFV LVSCGFSAAN 900
GHPSTLGGYK LTPNCYGLLT RLLSEVAGGK IVLVLEGGFE LEPLCDCTEA CVRTLLGNHE 960
YSNLSMESME RRPSKNAIDT IKNVITIQEK HW 992
Nucleotide Sequence
(Fasta)
ATATTTTAAG ATTGTAGTTT AGTTTTGATA TCTTGTAATA GTCTGTAAGG AACCAATTGC 60
AATGAAAAGT GATGACTAGA AGTCTACATT TATGCTGAAA AATGGCCAAA AGAGAAGAGG 120
GAAATGATGA ACTTCGAACT GTAACAAATG GGCTTGGACC TCAAGATACA AATGAAAATG 180
AACACAGAAT GGCTGTAGAC CCTGCAGTTT CAGCACTGAC TCCAAATTTT CTTGCTGCTG 240
TTTATGGCAT GGGAGAACGG CAGTATCAGG AAAAATTGAA AAGAATGAGG CATCAGCATG 300
AAATTGAAAA TCAGCTGTTA ATGGCGCAGT TCAACTACCA AACAAGCAAT TTGCAACATC 360
AACATCAATT GCAACAACAC TTGAATATTA CGAATGAAAT AAGAATTTCT GTTTGTTCAA 420
AGCATGTTAT CTCGAAGCAA AGGGAACGTG TTGCTGAACA GATGGCAGCA CTTGACCAAA 480
GAAGTGAACT GATTAATTCT GTTCGGAACA AAGAGAAAAA CAGAGAAAAA ACAGGTGCTG 540
TTGCATCAAA TGCTGTCAAG CAGCATCTAC AAAAGTTTGT AAAATGCCGA CAAAAATTCA 600
AAGATTCACA CCCTAGTATG GAGAGATTAT TGCACATTAG TCCTGGTGGC AATTACTTGG 660
CTTGTTTTAC TTACGTTGTT ACACATAGGT CTCCATTGCA ATGGACACCA TCTTTAGAAG 720
GAAAAAATGG AGGTCATGAA GTACCAGCAC ATTATTCCTC ATTATTACAC ACACAATATG 780
ACTTTCCACT AAGGAAAACA GCTTCGGAAC CAAACCTCAA GTTGAAGTCG CGTTTAAAAC 840
AGAAGTTGTT GGAGGACAGA GTTGAAAGGT CGTCACCACT CATGCCACGT CGCGGAGATA 900
TTAAGGCAGA TCTTGCAAAT CGAATCAAGA AAAAAATAAA TATAGAAAAT GTTAACGAAC 960
AAAGGAATTC ACACAACAGC GCTCCAAACT CTGGACCAAG TTCCCCTCCT AATTCATCAA 1020
ATGACATCAA ACAATCAACA CCACACATGC AAACAGAGTT TTACAATCAA CAGACTGATT 1080
ATTATGAAGA ATCAAATTCA TCTGGAAACC ATGACCTTTA TTCGTCGCCC TCTCTTCCAA 1140
ATATTTCTAT TGGACTTACA AATAAAAAAT CAACTGATCG TAGCATGCTT GTTGTGTCAG 1200
AGGAGTTAAG CAAGCGAGGA ACCCGAGGAT CCTCACTTTC CGATCCGATG ATTCAAAGTG 1260
ATAAACCATT ATTTCAGAGC CATGATAGAA CTGTTGCTGC CATAATAAAC AAAACTTTTC 1320
TAGTTTATGT ATTTATGCAC CAACATTTTA CTGCAAAGCT ACATGAGATT GATCTAACAC 1380
AAGCAGTGCA AGCTAACCTG CTGCCTCCAC ATAAGACAGT GCTACATGGT ACGTATCATT 1440
TGTGTACCCA AGCATCCACC CCACCAGGAC CAATACGTCA CTCACAAACC ACACGTCAAC 1500
ATAAAGCGTT GAGTCGGACA CAATCAGCAC CTACTGCTGC ATCGCAGTTG CAACTACATA 1560
TTTTACAGTT AAAGCGACGT CAAAAAATGC TACAGCAGCA GCAGAAGAAA GGTTTAATGC 1620
ACGGTGTGGC TGAGGTTGAT TCACATTCTT ATTCAATCCT CCCCACCCAC CTTGAAACAG 1680
AGGATGGGGA ACAATGGGTG AAACGGAATC AATACAGTCA TGCGCAGTCA ACACCAAACC 1740
AACCTTTCAT TCCAAGTAAC AAGATTGCTT CTACCCAAGC ACAATTGGTA GCAAGCAAAC 1800
CTGAAATCCC AGATTCAATG CTACCTATGT TTATCAACAA ACATTCTGGT AGCTCATTTT 1860
ACAATAAACC AACACAGGAG GAAGGTGGAA TCGCCGGTAC GCGACATCTG CCACCACAAT 1920
CCACCATACC CATTCACAGC CAACCATCAT CACTTAGTGA TCAGAATAAA CCACGTCTTC 1980
TGCGAACACA GAGTTCACCA GCAACATCAT TTATTAAGAA GTTACCTCAT TTTAAGAAAT 2040
ACAGATACAC CACGGGCATA GCTTATAGTC CAGTGATGTT AAAGCACGGA TGTGCCTGTC 2100
GTGACGACCA CACAGAACAC GCAGGTCGAC TGCGTGCAAT TTGGGAGCGA CTAACAAAAT 2160
CGAAGCTGGT TAACGACCCA AGTTGTGGTG GTACATCAGG AAAATCTTCG TGTGAGTTAC 2220
TGGAAGCAAG GAAAGCGACC ACGGATGAGT TACAACTGGT GCATACACAG GAACATACAT 2280
TGCGGTATGG GACAACTTCA CTTGCGAGGA AAGAACTAGG AGAAAAACTT TTGTGCCAAG 2340
AATTGACAAG CAAGTTCATA GTTCTCCCAT GTGGTGGTGT GGGCGTGGAT AATGGAATTG 2400
ACATCGATAC TGTGTGGAAT GAACTTGATA CCATCAATGC AGCACGAATG GCTGTTGGTT 2460
GTACGGTAGA CATCACATTA GAAGTTGCAC AGAATCGATT GAAGAATGGA TTTGCTCTCG 2520
TTCGACCACC AGGACATCAT GCTCAGAAAG ATCTTGCAAT GGCTTTCTGT TACTTTAACT 2580
CAGTAGCAGT GGCTGCAAGG AAATTACAAC ATGAATGTCC AGATACAGTG AGACGTGTGC 2640
TTATAGTGGA TTGGGATGTA CATCATTGTA ATGGAACTCA GAATATTTTC TTTGATGATC 2700
CATCAGTGCT TGTTATATCC ATACATAGAT ATGATTCTGG GAACTTTTTT CCTGGAACTG 2760
GAGCCATTAA TGAGTGTGGG CGTGGAGGAG GGCTTGGGTA TAATGTGAAC ATAGGGTTCA 2820
GTGGTGGGCT TGATCCTCCC ATGGAAGATG CCGATTACTT GGCTGTTTTT CGCACAATTG 2880
TTCTTCCCAT TGCCCGTCAG TTTGATCCTC ACTTTGTCCT CGTGTCGTGC GGGTTCTCGG 2940
CAGCCAACGG ACATCCTTCA ACACTAGGTG GCTACAAGCT GACCCCCAAT TGTTACGGGT 3000
TGCTGACAAG ATTATTATCT GAGGTAGCAG GTGGGAAGAT AGTGTTGGTG TTGGAGGGGG 3060
GGTTTGAACT TGAACCCTTG TGTGATTGCA CGGAAGCTTG TGTTCGAACA TTGCTTGGCA 3120
ACCATGAGTA TTCTAATTTA TCCATGGAAA GCATGGAGAG AAGGCCATCT AAAAATGCAA 3180
TTGATACCAT TAAAAATGTC ATCACTATAC AAGAAAAACA CTGG 3225
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Pat-0158 ENSPTRP00000032389.5 Pan troglodytes 38 8e-131 465
WERAM-Mam-0095 ENSMMUP00000014626.2 Macaca mulatta 38 2e-130 464
WERAM-Caj-0009 ENSCJAP00000001947.2 Callithrix jacchus 38 2e-130 464
WERAM-Nol-0183 ENSNLEP00000020216.1 Nomascus leucogenys 38 3e-130 463
WERAM-Poa-0162 ENSPPYP00000019901.2 Pongo abelii 38 4e-130 463
WERAM-Cis-0060 ENSCSAVP00000013851.1 Ciona savignyi 80 3e-129 460
WERAM-Loa-0142 ENSLAFP00000012719.4 Loxodonta africana 38 4e-129 460
WERAM-Caf-0031 ENSCAFP00000003650.3 Canis familiaris 37 1e-128 458
WERAM-Hos-0016 ENSP00000410337.2 Homo sapiens 37 4e-128 456
WERAM-Eqc-0153 ENSECAP00000016533.1 Equus caballus 37 7e-128 456
WERAM-Cap-0143 ENSCPOP00000011770.2 Cavia porcellus 53 1e-127 455
WERAM-Mup-0161 ENSMPUP00000013847.1 Mustela putorius furo 37 5e-126 449
WERAM-Lac-0062 ENSLACP00000008432.1 Latimeria chalumnae 52 7e-126 449
WERAM-Aim-0096 ENSAMEP00000008994.1 Ailuropoda melanoleuca 37 9e-126 449
WERAM-Chs-0068 ENSCSAP00000002314.1 Chlorocebus sabaeus 52 9e-126 449
WERAM-Ict-0095 ENSSTOP00000009983.2 Ictidomys tridecemlineatus 52 1e-125 448
WERAM-Pem-0041 ENSPMAP00000005402.1 Petromyzon marinus 51 2e-125 447
WERAM-Anc-0037 ENSACAP00000004435.3 Anolis carolinensis 50 5e-125 446
WERAM-Myl-0159 ENSMLUP00000013297.2 Myotis lucifugus 52 1e-124 445
WERAM-Bot-0159 ENSBTAP00000023621.5 Bos taurus 52 1e-124 445
WERAM-Paa-0012 ENSPANP00000003104.1 Papio anubis 52 1e-124 445
WERAM-Fec-0140 ENSFCAP00000013207.3 Felis catus 52 2e-124 444
WERAM-Otg-0061 ENSOGAP00000004404.2 Otolemur garnettii 52 2e-124 444
WERAM-Gaga-0049 ENSGALP00000033098.3 Gallus gallus 51 3e-124 443
WERAM-Tag-0050 ENSTGUP00000003338.1 Taeniopygia guttata 51 7e-124 442
WERAM-Pes-0126 ENSPSIP00000015149.1 Pelodiscus sinensis 50 8e-124 442
WERAM-Anp-0035 ENSAPLP00000004005.1 Anas platyrhynchos 51 1e-123 441
WERAM-Meg-0023 ENSMGAP00000001752.2 Meleagris gallopavo 51 1e-123 441
WERAM-Xet-0035 ENSXETP00000010592.2 Xenopus tropicalis 52 2e-123 441
WERAM-Sus-0169 ENSSSCP00000025173.1 Sus scrofa 51 2e-123 441
WERAM-Fia-0056 ENSFALP00000004005.1 Ficedula albicollis 51 2e-123 441
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 51 1e-122 438
WERAM-Ran-0135 ENSRNOP00000027622.5 Rattus norvegicus 51 3e-122 437
WERAM-Leo-0130 ENSLOCP00000016135.1 Lepisosteus oculatus 50 4e-122 437
WERAM-Mum-0077 ENSMUSP00000008995.8 Mus musculus 51 4e-122 436
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 51 5e-122 436
WERAM-Ptv-0156 ENSPVAP00000012934.1 Pteropus vampyrus 50 7e-122 436
WERAM-Tar-0145 ENSTRUP00000031264.1 Takifugu rubripes 43 1e-121 435
WERAM-Orn-0108 ENSONIP00000011544.1 Oreochromis niloticus 51 3e-121 433
WERAM-Gog-0157 ENSGGOP00000013985.2 Gorilla gorilla 51 5e-121 433
WERAM-Gaa-0079 ENSGACP00000010554.1 Gasterosteus aculeatus 50 7e-121 432
WERAM-Ten-0061 ENSTNIP00000000291.1 Tetraodon nigroviridis 51 9e-121 432
WERAM-Dar-0198 ENSDARP00000131327.1 Danio rerio 50 1e-120 431
WERAM-Sah-0025 ENSSHAP00000002837.1 Sarcophilus harrisii 50 4e-120 430
WERAM-Tut-0038 ENSTTRP00000002947.1 Tursiops truncatus 53 5e-120 430
WERAM-Orla-0199 ENSORLP00000022663.1 Oryzias latipes 48 7e-120 429
WERAM-Pof-0042 ENSPFOP00000003781.2 Poecilia formosa 52 8e-119 426
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 43 9e-119 425
WERAM-Ova-0200 ENSOARP00000020106.1 Ovis aries 51 1e-118 425
WERAM-Xim-0022 ENSXMAP00000002092.1 Xiphophorus maculatus 50 4e-118 423
WERAM-Orc-0142 ENSOCUP00000012429.3 Oryctolagus cuniculus 50 5e-118 423
WERAM-Mod-0095 ENSMODP00000032765.2 Monodelphis domestica 50 2e-117 421
WERAM-Dan-0156 ENSDNOP00000017844.1 Dasypus novemcinctus 50 2e-117 421
WERAM-Dio-0163 ENSDORP00000015416.1 Dipodomys ordii 50 4e-117 420
WERAM-Ocp-0087 ENSOPRP00000007869.2 Ochotona princeps 50 1e-116 418
WERAM-Mae-0085 ENSMEUP00000008564.1 Macropus eugenii 49 2e-116 417
WERAM-Prc-0092 ENSPCAP00000008303.1 Procavia capensis 50 7e-116 416
WERAM-Asm-0202 ENSAMXP00000018862.1 Astyanax mexicanus 50 2e-115 414
WERAM-Ere-0042 ENSEEUP00000003697.1 Erinaceus europaeus 50 7e-115 412
WERAM-Mim-0022 ENSMICP00000002393.1 Microcebus murinus 49 1e-107 388
WERAM-Gam-0063 ENSGMOP00000006368.1 Gadus morhua 46 6e-106 383
WERAM-Soa-0055 ENSSARP00000005400.1 Sorex araneus 46 2e-103 374
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 52 7e-102 369
WERAM-Cae-0008 C10E2.3a Caenorhabditis elegans 42 4e-91 333
WERAM-Ect-0082 ENSETEP00000009275.1 Echinops telfairi 43 3e-89 327
WERAM-Tub-0137 ENSTBEP00000014805.1 Tupaia belangeri 54 6e-89 326
WERAM-Chh-0086 ENSCHOP00000009630.1 Choloepus hoffmanni 46 9e-81 299
WERAM-Sem-0022 EFJ08599 Selaginella moellendorffii 40 4e-68 257
WERAM-Arl-0149 scaffold_802745.1 Arabidopsis lyrata 39 6e-68 256
WERAM-Brr-0181 Bra035942.1-P Brassica rapa 39 9e-68 256
WERAM-Ast-0014 CADATEAP00005667 Aspergillus terreus 36 9e-68 256
WERAM-Bro-0168 Bo9g014470.1 Brassica oleracea 39 3e-67 254
WERAM-Kop-0012 CAY68916 Komagataella pastoris 35 3e-67 254
WERAM-Asc-0002 CADACLAP00000048 Aspergillus clavatus 37 5e-67 253
WERAM-Asn-0017 CADANIAP00004063 Aspergillus nidulans 37 6e-67 253
WERAM-Caa-0034 KGT64501 Candida albicans 34 4e-66 251
WERAM-Lem-0023 CBX90551 Leptosphaeria maculans 33 2e-65 248
WERAM-Coi-0028 EAS30926 Coccidioides immitis 36 5e-65 247
WERAM-Art-0146 AT5G61060.1 Arabidopsis thaliana 40 5e-65 247
WERAM-Scp-0036 SPBC800.03.1:pep Schizosaccharomyces pombe 34 1e-64 246
Created Date 25-Jun-2016