WERAM Information


Tag Content
WERAM ID WERAM-Gaa-0079
Ensembl Protein ID ENSGACP00000010554.1
Gene Name hdac7b
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSGACG00000007965.1 ENSGACT00000010576.1 ENSGACP00000010554.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 1.60e-142 474.9 502 843
HDAC Class-I 9.10e-32 111.3 520 812
Organism Gasterosteus aculeatus
Domain Profile
  HDAC Class-II

           class-2.txt   2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles...... 84 
+glvyd++m khq++++++++hpE+++R+q+i+srl+e+gl++++e + r t+eelq+vHse+hv l++t+ +l++ +l++
ENSGACP00000010554.1 502 TGLVYDAQMQKHQCTCGDNSRHPEHAGRVQSIWSRLHERGLRSQCEINNPRVSTLEELQSVHSEKHVLLFGTN-PLNRLKLDNrklagv 589
79***********************************************************************.*************** PP
class-2.txt 85 .............ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqkl 160
++vd d+i++e +++ a+r+a+G+v++l+ kv++gelkngfavvRPPGHHa++s++ GFC+fn+va+aak+lq+k+
ENSGACP00000010554.1 590 lsqrifvmlpcggVGVDIDTIWNELHTSVASRIAAGCVTDLALKVAQGELKNGFAVVRPPGHHANHSSPLGFCFFNSVAIAAKQLQHKH 678
***************************************************************************************** PP
class-2.txt 161 kvkkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafrevvl 246
+v+kilivDwDvHhGnGtqe+fy+dp+vly+SlHRyd+g+ffp gsg+++evg g+gegfnvNv w+ggl mgdaeylaafr vv+
ENSGACP00000010554.1 679 NVSKILIVDWDVHHGNGTQEAFYNDPSVLYISLHRYDDGNFFP--GSGHPSEVGAGAGEGFNVNVGWTGGLnppMGDAEYLAAFRAVVM 765
*******************************************..******************************************** PP
class-2.txt 247 piakeFkPdlvlvsaGfDaaeg..dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322
pia+eF+Pd+vlvsaGfDa+eg ++lgg++vtakc++ lt+ql++laggrvvl+lEGG++lkai++a+ea+v+aLlg
ENSGACP00000010554.1 766 PIAHEFSPDVVLVSAGFDAVEGhlSSLGGYKVTAKCFGFLTRQLMSLAGGRVVLALEGGHDLKAICDASEACVSALLG 843
**********************999***************************************************96 PP

  HDAC Class-I

           class-1.txt  17 gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyi.....eflkkvepenae.......elskelkkfnvgedc. 92 
+++hp r++ + + + + gl + ei +p+ ++ eel+++hse+++ + l++ + +n + ++ l +vg d
ENSGACP00000010554.1 520 NSRHPEHAGRVQSIWSRLHERGLRSQCEINNPRVSTLEELQSVHSEKHVllfgtNPLNRLKLDNRKlagvlsqRIFVMLPCGGVGVDId 608
45688888889988899999999999999999999999999999999873333345788888888765544321112233335566652 PP
class-1.txt 93 Pvfdglfey..cqlitGasleaakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellkkhk..rvlyididlhhGDgv 175
+ ++l+ +++ +G + a k+ ++e + a+ G hha +s+ Gfc+ n + +a +l++kh+ ++l +d d+hhG+g
ENSGACP00000010554.1 609 TIWNELHTSvaSRIAAGCVTDLALKVAQGELKngFAVVRPPG-HHANHSSPLGFCFFNSVAIAAKQLQHKHNvsKILIVDWDVHHGNGT 696
467777654113456677777888999887662245555554.************************99885559************** PP
class-1.txt 176 eeafyttdrvmtvsfhkyge.effPgtGdlsdvgaekgkyyavnvPlkdg....idDesyekifksviskvieafePeavvlqcGaDsl 259
+eafy+ v+ +s+h+y++ +ffPg+G+ s+vga+ g + vnv + g + D +y + f+ v+ ++ + f+P++v++ G D++
ENSGACP00000010554.1 697 QEAFYNDPSVLYISLHRYDDgNFFPGSGHPSEVGAGAGEGFNVNVGWTGGlnppMGDAEYLAAFRAVVMPIAHEFSPDVVLVSAGFDAV 785
******************9746***********************87766222267********************************* PP
class-1.txt 260 agD..rlgefnlsikghaecvkfvksf 284
g lg ++++ k ++ + + s
ENSGACP00000010554.1 786 EGHlsSLGGYKVTAKCFGFLTRQLMSL 812
875337999999999888766655555 PP

Protein Sequence
(Fasta)
QPMDLSVTQR LLHPGLDPAM LAPRPPLFLG PLNSQHCSQF SPRHVQYNIE QRQREMEQEK 60
REELHQLIRK SKNEQSAVAS PLVKQKLREH IIMKSQPAHN NLPLTPNHST PTPGYSLSRL 120
PVPDMSPTSP TIACDQRKDL ALRRTVSEPT LKWKLKKLIS TRPNPLQRKI SAPPAVKHRT 180
ETLGRDSSTS SLSTPASGCS SPNDSLHSDN GHLPVAHEAQ RLLAHFTSPP NHPAMHNITA 240
GLPAQVSNNT VFGSLPNTDL RVARPLAVSA MHQIYMSVDG SSQALTQRQQ PLLILEPHTG 300
LVHSQLVSFR GLSSSPLQQQ QLHLSSSTRR EGVVTLPCHR PLERTRSEPP PYSRSPLTLH 360
ASRHPHIQHQ LTQHYHRSGL IPSEDMDLEE IGSESGSGPG SVCDSEPGSI KVSHFRVLLL 420
VHAPSFPVLL FYRMSWEPQR QVNLRSGLHL DPMAAPTLVW PHQPLVRTKS SPASTTLPPS 480
PHPPATLSLS SSAADVQLRF TTGLVYDAQM QKHQCTCGDN SRHPEHAGRV QSIWSRLHER 540
GLRSQCEINN PRVSTLEELQ SVHSEKHVLL FGTNPLNRLK LDNRKLAGVL SQRIFVMLPC 600
GGVGVDIDTI WNELHTSVAS RIAAGCVTDL ALKVAQGELK NGFAVVRPPG HHANHSSPLG 660
FCFFNSVAIA AKQLQHKHNV SKILIVDWDV HHGNGTQEAF YNDPSVLYIS LHRYDDGNFF 720
PGSGHPSEVG AGAGEGFNVN VGWTGGLNPP MGDAEYLAAF RAVVMPIAHE FSPDVVLVSA 780
GFDAVEGHLS SLGGYKVTAK CFGFLTRQLM SLAGGRVVLA LEGGHDLKAI CDASEACVSA 840
LLGMEVVEPL SQSVLDQKPC KNAIQSLEKV VQVQGEYWQS VKDSAATVDL SYLQAQRRRL 900
RRDSDSEAVR AIASLSMGSV ASDNKSEALV KSEVHMFH 938
Nucleotide Sequence
(Fasta)
CAGCCCATGG ACCTAAGTGT GACCCAGAGG TTGTTACATC CAGGCCTAGA TCCGGCCATG 60
CTGGCCCCCC GCCCTCCTTT GTTCCTTGGA CCCCTGAACT CTCAGCATTG CTCCCAGTTT 120
TCCCCGCGGC ACGTGCAGTA TAACATTGAA CAAAGGCAAA GAGAGATGGA GCAGGAGAAG 180
AGAGAAGAGC TACATCAGCT CATCCGAAAG AGTAAAAATG AGCAGAGTGC TGTAGCCAGT 240
CCACTGGTAA AACAGAAACT TCGGGAACAC ATAATAATGA AGAGCCAGCC TGCCCACAAC 300
AACCTGCCCT TGACTCCAAA CCACAGCACT CCTACACCCG GATACAGTCT TTCTAGGCTC 360
CCCGTTCCTG ACATGTCCCC AACATCTCCG ACTATAGCAT GTGACCAGCG TAAAGACCTT 420
GCCCTGCGCA GGACAGTCTC TGAGCCCACT CTGAAGTGGA AGTTAAAGAA GCTCATCAGT 480
ACAAGGCCAA ACCCGCTGCA GCGTAAGATC AGCGCCCCTC CTGCGGTGAA GCATAGGACA 540
GAAACTCTGG GTAGAGACTC TTCCACAAGC AGTCTCAGCA CCCCAGCATC AGGGTGCAGC 600
TCACCCAACG ACAGCCTCCA TTCGGACAAT GGGCACCTCC CAGTGGCACA TGAGGCACAG 660
AGGTTGCTGG CTCATTTCAC TTCTCCTCCC AACCACCCTG CAATGCACAA CATCACTGCT 720
GGACTTCCTG CTCAGGTGAG CAATAATACA GTCTTCGGTT CCCTTCCAAA TACTGACCTA 780
CGAGTAGCCA GGCCGTTAGC AGTATCTGCT ATGCATCAGA TCTACATGTC TGTAGACGGA 840
AGCAGTCAAG CCCTGACTCA GCGCCAGCAG CCTCTGCTCA TACTGGAACC ACATACCGGA 900
CTAGTGCATT CCCAGCTTGT CTCTTTTCGT GGTTTGAGTT CCAGTCCTCT CCAGCAGCAA 960
CAGCTTCACC TGTCCTCCTC GACCAGAAGG GAAGGCGTAG TTACTTTGCC CTGCCACAGA 1020
CCTCTGGAGC GAACACGCTC AGAGCCTCCG CCCTACAGCC GCTCACCTCT TACTCTGCAT 1080
GCCAGCCGCC ACCCACACAT CCAGCACCAG CTGACCCAGC ACTATCACAG GAGTGGACTG 1140
ATCCCATCGG AGGATATGGA CTTGGAGGAG ATTGGATCAG AATCAGGTTC GGGTCCTGGT 1200
TCCGTGTGCG ATTCAGAACC AGGCTCTATC AAAGTTAGCC ATTTCCGTGT TTTGCTGCTG 1260
GTACATGCTC CTTCATTCCC TGTTCTTCTG TTTTACCGTA TGTCCTGGGA ACCACAGAGG 1320
CAAGTGAACC TTAGATCAGG TCTCCATCTG GACCCCATGG CTGCGCCGAC CCTAGTTTGG 1380
CCTCATCAGC CTCTGGTTCG GACCAAGTCT TCCCCAGCCT CCACTACCCT GCCTCCTTCT 1440
CCACATCCAC CTGCAACCCT GTCACTGTCC AGCAGTGCAG CAGACGTCCA GCTACGCTTC 1500
ACCACAGGAC TGGTTTATGA TGCTCAGATG CAGAAGCATC AGTGTACCTG TGGGGACAAC 1560
AGCCGCCACC CTGAGCATGC TGGGAGGGTC CAGAGCATCT GGTCCAGACT GCATGAAAGA 1620
GGTCTCAGGA GCCAGTGTGA GATCAATAAC CCCAGAGTCA GTACTCTAGA AGAGCTGCAG 1680
TCGGTCCATT CAGAGAAACA TGTGCTTCTT TTCGGAACCA ACCCACTCAA CCGCCTTAAA 1740
CTGGACAACC GTAAGCTGGC TGGAGTCTTA TCTCAACGGA TTTTTGTGAT GTTGCCATGT 1800
GGAGGAGTTG GGGTGGACAT TGATACAATC TGGAATGAAC TTCACACTTC AGTGGCGTCC 1860
CGTATTGCTG CAGGATGTGT CACAGACCTG GCACTGAAGG TGGCGCAAGG AGAGCTGAAG 1920
AATGGCTTTG CAGTGGTGAG GCCTCCTGGA CACCACGCAA ACCACTCCTC CCCTCTGGGC 1980
TTCTGTTTCT TCAATTCCGT GGCTATTGCT GCCAAGCAGC TTCAACACAA ACACAACGTC 2040
AGCAAAATCC TCATCGTGGA CTGGGATGTT CACCACGGCA ACGGCACCCA GGAAGCCTTC 2100
TATAATGACC CAAGCGTACT GTACATCTCT CTGCATCGCT ATGACGATGG CAACTTCTTT 2160
CCTGGCAGTG GACATCCCAG TGAGGTGGGT GCAGGTGCAG GCGAGGGCTT CAATGTTAAT 2220
GTGGGATGGA CAGGGGGTTT GAACCCGCCC ATGGGTGATG CAGAGTACCT GGCTGCATTC 2280
AGAGCCGTGG TGATGCCCAT CGCTCACGAG TTTTCCCCTG ATGTGGTGCT TGTGTCTGCT 2340
GGCTTTGATG CTGTTGAAGG ACATTTGTCA TCACTGGGAG GCTACAAGGT CACAGCCAAG 2400
TGTTTTGGCT TCCTGACCCG TCAACTGATG TCACTGGCCG GGGGTCGGGT GGTCCTGGCT 2460
CTGGAGGGGG GACATGACCT CAAGGCTATC TGCGATGCCT CTGAAGCCTG CGTAAGCGCC 2520
TTGTTGGGCA TGGAGGTGGT GGAGCCTCTT TCCCAGTCTG TATTGGACCA GAAACCTTGT 2580
AAAAATGCAA TCCAGTCGCT GGAGAAAGTC GTCCAGGTCC AAGGTGAATA CTGGCAGAGT 2640
GTGAAAGATT CGGCTGCCAC AGTGGATCTG TCGTACCTAC AGGCACAGAG ACGGCGGCTG 2700
AGACGAGATT CGGACAGCGA GGCCGTCAGA GCCATCGCCT CGCTCTCCAT GGGATCTGTT 2760
GCTTCTGACA ATAAGAGTGA AGCGTTAGTG AAGTCGGAGG TGCATATGTT TCAT 2815
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orn-0227 ENSONIP00000024390.1 Oreochromis niloticus 71 0.0 1179
WERAM-Tar-0132 ENSTRUP00000028721.1 Takifugu rubripes 69 0.0 1118
WERAM-Xim-0225 ENSXMAP00000018758.1 Xiphophorus maculatus 65 0.0 1079
WERAM-Pof-0015 ENSPFOP00000001511.2 Poecilia formosa 65 0.0 1068
WERAM-Orla-0178 ENSORLP00000020522.1 Oryzias latipes 61 0.0 1039
WERAM-Ten-0061 ENSTNIP00000000291.1 Tetraodon nigroviridis 54 0.0 758
WERAM-Leo-0044 ENSLOCP00000006280.1 Lepisosteus oculatus 53 0.0 754
WERAM-Gaga-0067 ENSGALP00000010190.4 Gallus gallus 50 0.0 735
WERAM-Anc-0160 ENSACAP00000015012.3 Anolis carolinensis 50 0.0 734
WERAM-Gam-0217 ENSGMOP00000020919.1 Gadus morhua 53 0.0 731
WERAM-Anp-0061 ENSAPLP00000006782.1 Anas platyrhynchos 49 0.0 720
WERAM-Xet-0073 ENSXETP00000023344.3 Xenopus tropicalis 52 0.0 714
WERAM-Bot-0201 ENSBTAP00000038136.4 Bos taurus 53 0.0 709
WERAM-Mup-0003 ENSMPUP00000000413.1 Mustela putorius furo 53 0.0 709
WERAM-Meg-0108 ENSMGAP00000010913.2 Meleagris gallopavo 50 0.0 706
WERAM-Caf-0101 ENSCAFP00000013479.3 Canis familiaris 53 0.0 701
WERAM-Eqc-0166 ENSECAP00000018277.1 Equus caballus 53 0.0 700
WERAM-Sah-0025 ENSSHAP00000002837.1 Sarcophilus harrisii 50 0.0 700
WERAM-Tut-0143 ENSTTRP00000011934.1 Tursiops truncatus 52 0.0 698
WERAM-Dar-0240 ENSDARP00000132042.1 Danio rerio 75 0.0 666
WERAM-Ptv-0096 ENSPVAP00000008849.1 Pteropus vampyrus 50 0.0 662
WERAM-Lac-0191 ENSLACP00000021749.1 Latimeria chalumnae 67 0.0 654
WERAM-Pes-0124 ENSPSIP00000014863.1 Pelodiscus sinensis 73 0.0 650
WERAM-Paa-0072 ENSPANP00000008610.1 Papio anubis 72 0.0 646
WERAM-Chs-0077 ENSCSAP00000002870.1 Chlorocebus sabaeus 72 0.0 645
WERAM-Aim-0143 ENSAMEP00000013629.1 Ailuropoda melanoleuca 72 0.0 644
WERAM-Gog-0184 ENSGGOP00000016066.2 Gorilla gorilla 72 0.0 643
WERAM-Pat-0040 ENSPTRP00000008320.5 Pan troglodytes 72 0.0 642
WERAM-Nol-0194 ENSNLEP00000021748.1 Nomascus leucogenys 72 0.0 642
WERAM-Hos-0021 ENSP00000080059.7 Homo sapiens 72 0.0 642
WERAM-Fec-0138 ENSFCAP00000012982.3 Felis catus 71 0.0 642
WERAM-Cap-0074 ENSCPOP00000005427.2 Cavia porcellus 71 0.0 638
WERAM-Mum-0046 ENSMUSP00000085744.5 Mus musculus 71 0.0 633
WERAM-Ran-0240 ENSRNOP00000073744.1 Rattus norvegicus 71 0.0 632
WERAM-Mim-0087 ENSMICP00000008193.1 Microcebus murinus 48 0.0 632
WERAM-Myl-0009 ENSMLUP00000000824.2 Myotis lucifugus 70 2e-180 630
WERAM-Ict-0024 ENSSTOP00000001667.2 Ictidomys tridecemlineatus 71 2e-180 630
WERAM-Ova-0207 ENSOARP00000020819.1 Ovis aries 71 4e-180 629
WERAM-Tag-0050 ENSTGUP00000003338.1 Taeniopygia guttata 70 5e-180 629
WERAM-Fia-0056 ENSFALP00000004005.1 Ficedula albicollis 70 8e-180 628
WERAM-Pem-0041 ENSPMAP00000005402.1 Petromyzon marinus 69 2e-179 627
WERAM-Sus-0169 ENSSSCP00000025173.1 Sus scrofa 69 1e-178 624
WERAM-Otg-0061 ENSOGAP00000004404.2 Otolemur garnettii 68 2e-178 624
WERAM-Loa-0049 ENSLAFP00000003605.3 Loxodonta africana 70 7e-178 622
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 67 2e-177 620
WERAM-Dan-0112 ENSDNOP00000014271.3 Dasypus novemcinctus 71 1e-176 617
WERAM-Mae-0085 ENSMEUP00000008564.1 Macropus eugenii 70 4e-176 616
WERAM-Caj-0101 ENSCJAP00000017313.2 Callithrix jacchus 69 6e-176 615
WERAM-Mam-0226 ENSMMUP00000028518.2 Macaca mulatta 78 9e-176 615
WERAM-Prc-0083 ENSPCAP00000007167.1 Procavia capensis 69 8e-175 611
WERAM-Asm-0202 ENSAMXP00000018862.1 Astyanax mexicanus 68 1e-172 604
WERAM-Dio-0163 ENSDORP00000015416.1 Dipodomys ordii 68 6e-171 598
WERAM-Orc-0081 ENSOCUP00000007421.3 Oryctolagus cuniculus 68 1e-170 598
WERAM-Ocp-0087 ENSOPRP00000007869.2 Ochotona princeps 68 3e-170 596
WERAM-Poa-0072 ENSPPYP00000009379.1 Pongo abelii 68 1e-169 594
WERAM-Mod-0095 ENSMODP00000032765.2 Monodelphis domestica 67 2e-168 590
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 65 7e-166 582
WERAM-Ere-0008 ENSEEUP00000000313.1 Erinaceus europaeus 48 2e-160 564
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 56 3e-148 523
WERAM-Soa-0055 ENSSARP00000005400.1 Sorex araneus 61 3e-148 523
WERAM-Ect-0068 ENSETEP00000007698.1 Echinops telfairi 45 3e-147 520
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 66 3e-145 513
WERAM-Cii-0046 ENSCINP00000016829.3 Ciona intestinalis 52 2e-124 444
WERAM-Tub-0137 ENSTBEP00000014805.1 Tupaia belangeri 68 2e-123 441
WERAM-Cae-0008 C10E2.3a Caenorhabditis elegans 48 1e-114 412
WERAM-Chh-0086 ENSCHOP00000009630.1 Choloepus hoffmanni 62 2e-111 401
WERAM-Cis-0060 ENSCSAVP00000013851.1 Ciona savignyi 52 7e-90 329
WERAM-Sem-0022 EFJ08599 Selaginella moellendorffii 41 9e-78 289
WERAM-Php-0085 PP1S34_252V6.1 Physcomitrella patens 44 2e-75 281
WERAM-Brr-0181 Bra035942.1-P Brassica rapa 41 3e-75 280
WERAM-Bro-0168 Bo9g014470.1 Brassica oleracea 40 6e-75 280
Created Date 25-Jun-2016