WERAM Information


Tag Content
WERAM ID WERAM-Orn-0227
Ensembl Protein ID ENSONIP00000024390.1
Gene Name hdac7b
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSONIG00000019376.1 ENSONIT00000024411.1 ENSONIP00000024390.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 9.50e-142 472.3 483 824
HDAC Class-I 2.00e-29 103.6 503 793
Organism Oreochromis niloticus
Domain Profile
  HDAC Class-II

           class-2.txt   2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles...... 84 
+gl yd +m khq++++++++h E+++Riq+i+srl+e+gl++++e++++rkat+eelq+vHse+hv l++t+ +l++ +l+s
ENSONIP00000024390.1 483 TGLAYDGQMQKHQCICGDNSRHAEHAGRIQSIWSRLHERGLRSQCERIRSRKATLEELQSVHSEKHVLLFGTN-PLNRLKLDSrklagi 570
789**********************************************************************.*************** PP
class-2.txt 85 .............ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqkl 160
++vd d++++e+++++a+r+a+G+v++l+ kv++ elkngfavvRPPGHH + t GFC+fn+va+aak+lqqkl
ENSONIP00000024390.1 571 lsqhvflmlpcggVGVDIDTVWNEHHTSAASRIAAGCVTDLALKVAQRELKNGFAVVRPPGHHGNGCTELGFCFFNSVAIAAKQLQQKL 659
***************************************************************************************** PP
class-2.txt 161 kvkkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafrevvl 246
+v+kilivDwDvHhGnGtqe+fy+dp+vly+SlHRyd+g+ffp gsg+++evg g+gegfnvNv w+ggl mgdaeylaafr vv+
ENSONIP00000024390.1 660 SVSKILIVDWDVHHGNGTQEAFYSDPSVLYISLHRYDDGNFFP--GSGHPSEVGAGPGEGFNVNVGWTGGLnppMGDAEYLAAFRAVVM 746
*******************************************..******************************************** PP
class-2.txt 247 piakeFkPdlvlvsaGfDaaeg..dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322
pia+eF+Pd+vlvsaGfDa+eg ++lgg++vtakc++ lt+ql++lagg+vv++lEGG++lkai++a+ea+v+aLlg
ENSONIP00000024390.1 747 PIAHEFSPDVVLVSAGFDAVEGhpSSLGGYKVTAKCFGFLTRQLMSLAGGKVVMALEGGHDLKAICDASEACVSALLG 824
**********************8889**************************************************96 PP

  HDAC Class-I

           class-1.txt  19 khpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyi.....eflkkvepenae.......els...kelkkfnvgedc 92 
+h+ r++ + + + + gl + e+++++ka+ eel+++hse+++ + l++ + ++ + + +v+ d+
ENSONIP00000024390.1 503 RHAEHAGRIQSIWSRLHERGLRSQCERIRSRKATLEELQSVHSEKHVllfgtNPLNRLKLDSRKlagilsqH-VflmLPCGGVGVDIDT 590
455566677777777788888888888888888888888888888772222234566666665555544321.1111122223333344 PP
class-1.txt 93 Pvfdglfeyc.qlitGasleaakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellk..khkrvlyididlhhGDgve 176
++ + + ++ +G + a k+ ++e + a+ G hh + Gfc+ n + +a +l++ + +++l +d d+hhG+g +
ENSONIP00000024390.1 591 VWNEHHTSAAsRIAAGCVTDLALKVAQRELKngFAVVRPPG-HHGNGCTELGFCFFNSVAIAAKQLQQklSVSKILIVDWDVHHGNGTQ 678
33333333331455666667777887776551145555555.99999999****************9945568**************** PP
class-1.txt 177 eafyttdrvmtvsfhkyge.effPgtGdlsdvgaekgkyyavnvPlkdg....idDesyekifksviskvieafePeavvlqcGaDsla 260
eafy v+ +s+h+y++ +ffPg+G+ s+vga+ g + vnv + g + D +y + f+ v+ ++ + f+P++v++ G D++
ENSONIP00000024390.1 679 EAFYSDPSVLYISLHRYDDgNFFPGSGHPSEVGAGPGEGFNVNVGWTGGlnppMGDAEYLAAFRAVVMPIAHEFSPDVVLVSAGFDAVE 767
*****************9746***********************87766222267*********************************9 PP
class-1.txt 261 gDr..lgefnlsikghaecvkfvksf 284
g + lg ++++ k ++ + + s
ENSONIP00000024390.1 768 GHPssLGGYKVTAKCFGFLTRQLMSL 793
97444999999999988777666665 PP

Protein Sequence
(Fasta)
MDLSVTRRLL HPGPDSAMLA PRPPFFMGSL TPQHCAQFSQ QHLQYNIEQR QREMSEEKRE 60
ELHQLIQKSK NEQSAIASPL VKQKLREHII MKSQPTHDRV TPNHTSPAPG FGRLRVPDMS 120
PKPQPTPCDQ RALRRTVSEP TLKWKLKKLI TTRPNPLQRK ISAPPAVKHR PETLDSSQSG 180
SSNPASGCSS PNDSLHSDNG SLPLAHEADL REARPLAVSG LHQVYLPLEE SSPALSQRLQ 240
PVFILDPQTR LLRPQLVSLP GLSAIPLQQH PHLSSLSRRE GHKPLERTRS EPPPYSHSQL 300
SLQTSHHPHI QHSLNQQYHR SGVERFKQNS HLSKLGKKID NRLPLTQIPS EDMDLEETGS 360
GSGSGTGSVC GSEPGSICED DYRRRQSNAS TDSVYDTEST TSSRESLIEP SYSFNQQRQV 420
ILRPSLQIDP MGVPSLIWPH QPVSRSRSSP ASTSLPPASH QPTTIPSMSL SNPATDTQLR 480
FTTGLAYDGQ MQKHQCICGD NSRHAEHAGR IQSIWSRLHE RGLRSQCERI RSRKATLEEL 540
QSVHSEKHVL LFGTNPLNRL KLDSRKLAGI LSQHVFLMLP CGGVGVDIDT VWNEHHTSAA 600
SRIAAGCVTD LALKVAQREL KNGFAVVRPP GHHGNGCTEL GFCFFNSVAI AAKQLQQKLS 660
VSKILIVDWD VHHGNGTQEA FYSDPSVLYI SLHRYDDGNF FPGSGHPSEV GAGPGEGFNV 720
NVGWTGGLNP PMGDAEYLAA FRAVVMPIAH EFSPDVVLVS AGFDAVEGHP SSLGGYKVTA 780
KCFGFLTRQL MSLAGGKVVM ALEGGHDLKA ICDASEACVS ALLGMEVEPL SQSVLDQKPC 840
ENAVLSLQKV IQIHGEYWQS LKDSASTVDM SYLQAQRRRL RRDSDSEAVS AIASLSMGSL 900
ASDSLRGRSR PQKDVRVMER
Nucleotide Sequence
(Fasta)
ATGGACCTAA GTGTGACCCG CAGGTTGTTA CATCCAGGCC CAGATTCGGC CATGCTGGCC 60
CCCCGCCCTC CTTTCTTCAT GGGATCCCTC ACCCCTCAAC ATTGTGCCCA ATTCTCCCAG 120
CAGCACTTGC AGTATAACAT CGAACAAAGG CAAAGAGAGA TGAGTGAGGA GAAAAGAGAA 180
GAGCTACATC AGCTGATTCA AAAGAGTAAA AACGAGCAGA GTGCTATAGC CAGTCCCCTG 240
GTAAAGCAGA AACTTCGGGA ACACATAATT ATGAAGAGCC AGCCAACCCA TGATAGAGTG 300
ACTCCCAACC ACACCAGTCC TGCCCCAGGA TTCGGAAGGC TCCGGGTTCC TGATATGTCC 360
CCAAAGCCTC AGCCTACACC CTGTGACCAG CGCGCTTTGA GAAGAACAGT GTCTGAGCCC 420
ACGCTGAAGT GGAAGTTAAA GAAACTCATT ACCACAAGGC CAAACCCGCT GCAGCGTAAG 480
ATCAGTGCCC CTCCTGCAGT CAAGCACAGG CCCGAAACTC TGGACTCTTC CCAGAGTGGC 540
AGCAGCAATC CAGCATCAGG GTGCAGCTCT CCAAATGACA GCCTCCATTC AGATAATGGG 600
TCGCTACCAC TGGCTCATGA GGCTGACTTG CGAGAGGCAA GGCCATTGGC AGTATCTGGT 660
CTCCATCAGG TTTACTTGCC TCTGGAAGAA AGCAGTCCAG CTCTTTCTCA GCGGCTACAG 720
CCTGTGTTCA TACTGGATCC ACAAACCAGG CTTCTGCGCC CCCAGCTTGT CTCTCTTCCT 780
GGTTTGAGCG CCATCCCTCT GCAGCAGCAC CCTCACCTGT CTTCTCTGTC CAGAAGAGAA 840
GGTCACAAAC CTTTGGAGCG AACACGTTCA GAACCGCCAC CCTACAGCCA CTCACAGTTA 900
TCTCTGCAAA CCAGCCATCA CCCACACATC CAGCACTCGC TGAACCAGCA GTACCACAGG 960
AGCGGGGTGG AGAGATTCAA GCAGAATTCA CACCTGAGCA AGCTGGGAAA AAAGATAGAT 1020
AACAGGCTTC CTCTGACACA GATTCCATCG GAGGACATGG ACCTAGAGGA GACTGGATCG 1080
GGATCAGGTT CGGGGACAGG TTCTGTGTGC GGCTCAGAGC CCGGCTCAAT TTGTGAGGAT 1140
GACTATCGGC GGAGACAGAG CAATGCCAGC ACAGACTCTG TGTACGACAC AGAGTCTACT 1200
ACCTCCTCCC GGGAGAGCTT GATTGAGCCC TCCTACTCTT TCAATCAGCA GAGGCAGGTG 1260
ATCCTTAGAC CAAGTCTGCA GATAGATCCG ATGGGTGTGC CATCCTTAAT TTGGCCTCAC 1320
CAGCCTGTCA GTCGGTCCCG GTCCTCCCCA GCCTCCACCT CCCTGCCTCC TGCTTCACAT 1380
CAACCCACCA CCATACCTTC CATGTCATTA TCCAACCCTG CTACAGACAC CCAGCTGCGC 1440
TTCACCACAG GTTTAGCATA TGATGGTCAG ATGCAGAAGC ACCAGTGTAT TTGTGGGGAC 1500
AACAGCCGTC ACGCTGAGCA TGCAGGAAGG ATCCAGAGCA TCTGGTCTAG ACTGCATGAA 1560
AGGGGCCTAA GGAGTCAGTG TGAGCGCATC CGCAGTAGAA AAGCAACCCT AGAAGAGCTG 1620
CAGTCAGTCC ATTCAGAAAA ACACGTACTT TTATTTGGCA CCAACCCGCT CAACCGCCTC 1680
AAGCTGGACA GCCGCAAACT CGCTGGAATC CTGTCTCAAC ATGTTTTTTT GATGTTACCA 1740
TGTGGAGGGG TTGGGGTGGA TATTGATACA GTCTGGAACG AACATCACAC ATCAGCAGCC 1800
TCCCGCATTG CTGCAGGATG TGTCACAGAC CTGGCACTGA AGGTGGCACA AAGAGAGCTG 1860
AAGAATGGCT TTGCAGTTGT GAGGCCCCCT GGACACCATG GGAACGGCTG CACCGAGTTG 1920
GGCTTCTGTT TCTTCAACTC TGTGGCCATC GCTGCCAAGC AGCTCCAGCA GAAACTCAGC 1980
GTCAGCAAGA TCCTCATTGT GGACTGGGAT GTACACCATG GCAACGGCAC CCAGGAAGCC 2040
TTCTACAGCG ACCCAAGTGT GCTGTACATC TCTCTACATC GCTATGACGA TGGCAACTTT 2100
TTTCCTGGTA GTGGACACCC CAGCGAGGTG GGTGCAGGTC CAGGTGAGGG CTTCAATGTG 2160
AATGTAGGAT GGACCGGAGG ACTGAACCCT CCAATGGGCG ATGCTGAATA CCTGGCTGCG 2220
TTCAGAGCTG TGGTGATGCC CATCGCTCAC GAGTTTTCCC CTGATGTCGT CCTCGTGTCA 2280
GCTGGCTTTG ATGCTGTCGA AGGACATCCA TCATCGCTCG GAGGATACAA GGTTACAGCC 2340
AAGTGTTTTG GCTTCCTGAC CCGTCAACTG ATGTCACTGG CTGGCGGTAA GGTGGTCATG 2400
GCTCTGGAGG GTGGGCATGA CCTCAAAGCT ATCTGCGATG CTTCCGAAGC CTGTGTGAGC 2460
GCCTTGCTGG GCATGGAGGT GGAGCCTCTG TCCCAGTCGG TGTTGGACCA GAAGCCTTGT 2520
GAAAATGCGG TGCTTTCTCT GCAGAAAGTC ATCCAGATTC ATGGTGAATA CTGGCAGAGT 2580
TTGAAGGATT CGGCCTCCAC AGTGGATATG TCCTACTTGC AGGCGCAGAG ACGAAGACTG 2640
AGACGAGACT CGGACAGCGA GGCTGTCAGC GCCATCGCCT CTCTGTCGAT GGGGTCTCTC 2700
GCATCTGACA GTTTGAGAGG AAGGAGTCGT CCCCAAAAGG ACGTGCGAGT GATGGAGCGC 2760
2761
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Gaa-0079 ENSGACP00000010554.1 Gasterosteus aculeatus 72 0.0 1190
WERAM-Xim-0225 ENSXMAP00000018758.1 Xiphophorus maculatus 71 0.0 1172
WERAM-Pof-0015 ENSPFOP00000001511.2 Poecilia formosa 70 0.0 1144
WERAM-Tar-0132 ENSTRUP00000028721.1 Takifugu rubripes 67 0.0 1128
WERAM-Orla-0178 ENSORLP00000020522.1 Oryzias latipes 63 0.0 1060
WERAM-Leo-0044 ENSLOCP00000006280.1 Lepisosteus oculatus 55 0.0 805
WERAM-Gaga-0067 ENSGALP00000010190.4 Gallus gallus 52 0.0 796
WERAM-Pes-0124 ENSPSIP00000014863.1 Pelodiscus sinensis 51 0.0 771
WERAM-Ten-0061 ENSTNIP00000000291.1 Tetraodon nigroviridis 53 0.0 742
WERAM-Anc-0160 ENSACAP00000015012.3 Anolis carolinensis 50 0.0 740
WERAM-Meg-0108 ENSMGAP00000010913.2 Meleagris gallopavo 50 0.0 735
WERAM-Anp-0061 ENSAPLP00000006782.1 Anas platyrhynchos 56 0.0 703
WERAM-Bot-0201 ENSBTAP00000038136.4 Bos taurus 49 0.0 694
WERAM-Lac-0191 ENSLACP00000021749.1 Latimeria chalumnae 56 0.0 689
WERAM-Caf-0101 ENSCAFP00000013479.3 Canis familiaris 50 0.0 685
WERAM-Tut-0143 ENSTTRP00000011934.1 Tursiops truncatus 49 0.0 679
WERAM-Pat-0040 ENSPTRP00000008320.5 Pan troglodytes 49 0.0 675
WERAM-Dar-0240 ENSDARP00000132042.1 Danio rerio 77 0.0 673
WERAM-Ict-0024 ENSSTOP00000001667.2 Ictidomys tridecemlineatus 47 0.0 666
WERAM-Xet-0073 ENSXETP00000023344.3 Xenopus tropicalis 73 0.0 660
WERAM-Caj-0152 ENSCJAP00000019002.2 Callithrix jacchus 50 0.0 652
WERAM-Sus-0169 ENSSSCP00000025173.1 Sus scrofa 70 0.0 643
WERAM-Myl-0159 ENSMLUP00000013297.2 Myotis lucifugus 69 0.0 643
WERAM-Paa-0072 ENSPANP00000008610.1 Papio anubis 72 0.0 642
WERAM-Chs-0077 ENSCSAP00000002870.1 Chlorocebus sabaeus 72 0.0 642
WERAM-Cap-0143 ENSCPOP00000011770.2 Cavia porcellus 70 0.0 642
WERAM-Aim-0143 ENSAMEP00000013629.1 Ailuropoda melanoleuca 71 0.0 641
WERAM-Fec-0138 ENSFCAP00000012982.3 Felis catus 71 0.0 641
WERAM-Mup-0001 ENSMPUP00000000123.1 Mustela putorius furo 70 0.0 641
WERAM-Hos-0025 ENSP00000264606.3 Homo sapiens 70 0.0 641
WERAM-Sah-0025 ENSSHAP00000002837.1 Sarcophilus harrisii 70 0.0 640
WERAM-Eqc-0166 ENSECAP00000018277.1 Equus caballus 71 0.0 640
WERAM-Otg-0061 ENSOGAP00000004404.2 Otolemur garnettii 70 0.0 640
WERAM-Nol-0194 ENSNLEP00000021748.1 Nomascus leucogenys 72 0.0 640
WERAM-Gog-0184 ENSGGOP00000016066.2 Gorilla gorilla 72 0.0 639
WERAM-Pem-0041 ENSPMAP00000005402.1 Petromyzon marinus 70 0.0 636
WERAM-Ran-0240 ENSRNOP00000073744.1 Rattus norvegicus 70 0.0 633
WERAM-Tag-0054 ENSTGUP00000003859.1 Taeniopygia guttata 54 0.0 632
WERAM-Ova-0207 ENSOARP00000020819.1 Ovis aries 71 0.0 631
WERAM-Loa-0107 ENSLAFP00000009167.2 Loxodonta africana 70 0.0 631
WERAM-Mum-0046 ENSMUSP00000085744.5 Mus musculus 71 1e-180 630
WERAM-Fia-0129 ENSFALP00000010805.1 Ficedula albicollis 43 1e-180 630
WERAM-Gam-0217 ENSGMOP00000020919.1 Gadus morhua 48 2e-179 627
WERAM-Ptv-0156 ENSPVAP00000012934.1 Pteropus vampyrus 68 3e-179 626
WERAM-Dan-0112 ENSDNOP00000014271.3 Dasypus novemcinctus 69 1e-178 624
WERAM-Mam-0226 ENSMMUP00000028518.2 Macaca mulatta 77 5e-176 615
WERAM-Asm-0202 ENSAMXP00000018862.1 Astyanax mexicanus 69 1e-175 614
WERAM-Prc-0083 ENSPCAP00000007167.1 Procavia capensis 68 2e-175 613
WERAM-Mae-0085 ENSMEUP00000008564.1 Macropus eugenii 69 4e-175 612
WERAM-Dio-0163 ENSDORP00000015416.1 Dipodomys ordii 68 2e-172 603
WERAM-Orc-0081 ENSOCUP00000007421.3 Oryctolagus cuniculus 67 4e-172 602
WERAM-Mod-0095 ENSMODP00000032765.2 Monodelphis domestica 67 7e-172 602
WERAM-Ocp-0087 ENSOPRP00000007869.2 Ochotona princeps 68 1e-171 601
WERAM-Poa-0072 ENSPPYP00000009379.1 Pongo abelii 68 6e-171 598
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 63 2e-169 593
WERAM-Ere-0042 ENSEEUP00000003697.1 Erinaceus europaeus 71 2e-163 573
WERAM-Mim-0022 ENSMICP00000002393.1 Microcebus murinus 65 6e-161 565
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 59 1e-154 544
WERAM-Soa-0055 ENSSARP00000005400.1 Sorex araneus 58 1e-150 531
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 66 1e-148 525
WERAM-Ora-0021 ENSOANP00000002915.1 Ornithorhynchus anatinus 76 4e-141 499
WERAM-Ect-0082 ENSETEP00000009275.1 Echinops telfairi 57 4e-136 483
WERAM-Cii-0046 ENSCINP00000016829.3 Ciona intestinalis 52 7e-124 442
WERAM-Tub-0137 ENSTBEP00000014805.1 Tupaia belangeri 69 1e-123 441
WERAM-Cae-0008 C10E2.3a Caenorhabditis elegans 50 9e-118 422
WERAM-Chh-0086 ENSCHOP00000009630.1 Choloepus hoffmanni 63 2e-113 407
WERAM-Cis-0060 ENSCSAVP00000013851.1 Ciona savignyi 54 1e-90 332
WERAM-Bro-0168 Bo9g014470.1 Brassica oleracea 41 3e-78 291
WERAM-Sem-0022 EFJ08599 Selaginella moellendorffii 41 3e-78 291
WERAM-Brr-0181 Bra035942.1-P Brassica rapa 43 2e-77 288
WERAM-Arl-0149 scaffold_802745.1 Arabidopsis lyrata 42 2e-74 278
WERAM-Thc-0031 EOY22062 Theobroma cacao 39 3e-74 277
WERAM-Php-0085 PP1S34_252V6.1 Physcomitrella patens 42 8e-74 276
WERAM-Sol-0055 Solyc03g115150.2.1 Solanum lycopersicum 39 1e-73 275
Created Date 25-Jun-2016