Tag |
Content |
WERAM ID |
WERAM-Leo-0044 |
Ensembl Protein ID |
ENSLOCP00000006280.1 |
Gene Name |
HDAC7 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
1.60e-140 |
468.1 |
49 |
838 |
HDAC |
Class-I |
2.40e-29 |
103 |
513 |
791 |
|
Organism |
Lepisosteus oculatus |
Domain Profile |
HDAC Class-II
class-2.txt 71 letae.klekeelesltvdsdsiylesksikaarlavGavlelvdkvlkgel 121 ++ ++ + ++e+ ++ +++ ++++ + ks ++a a av + ++v+ ++ ENSLOCP00000006280.1 49 IRFNMeQRRREQEQEKQQELQQLWHKDKSKQSAV-ASTAVKQKLQEVILKKQ 99 3333323444444446788899999998877765.55555555555554443 PP class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles...... 84 +glvyd++mlkhq++++++++hpE+++Riq+i+srlqe+gl++++e++++rkat+eelq+vHse+hv l++t+ +l++ +l++ ENSLOCP00000006280.1 495 TGLVYDSQMLKHQCTCGDNSTHPEHAGRIQSIWSRLQERGLRNQCESIRGRKATLEELQSVHSERHVLLYGTN-PLNRLKLDNrklagi 582 79***********************************************************************.*************** PP class-2.txt 85 .............ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqkl 160 ++vd d+i++e ++++a+r+a+G+v+el+++v+kgelkngfavvRPPGHHa++s++mGFC+fn+va+aak+lqqkl ENSLOCP00000006280.1 583 lsqrmfvmlpcggVGVDNDTIWNELHTSTASRMAAGSVTELAFRVAKGELKNGFAVVRPPGHHADHSSPMGFCFFNSVAIAAKQLQQKL 671 ***************************************************************************************** PP class-2.txt 161 kvkkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafrevvl 246 +++kilivDwDvHhGnGtqe+fy+dp+vly+SlHRyd+g+ffp gsg ++evg+g+g+gfnvNvaw+ggl mgdaeylaafr+vv+ ENSLOCP00000006280.1 672 SASKILIVDWDVHHGNGTQEVFYNDPSVLYISLHRYDDGNFFP--GSGGPTEVGTGPGVGFNVNVAWTGGLdppMGDAEYLAAFRTVVM 758 *******************************************..******************************************** PP class-2.txt 247 piakeFkPdlvlvsaGfDaaeg..dplgglsvtak.cyatltkqllkl.aggrvvlvlEGGynlkaiaeaveavvkaLlg 322 pia+eF+Pd+vlvs+GfDaaeg plgg++v+ak c ++ + l + ggr+vl+lEGG++l+ai++a+ea+v+aLlg ENSLOCP00000006280.1 759 PIAQEFSPDVVLVSSGFDAAEGhpPPLGGYQVSAKfCTIYIGERLYAVgNGGRLVLALEGGHDLTAICDASEACVNALLG 838 **********************9999*******99457799999*9997899**************************96 PP
HDAC Class-I
class-1.txt 17 gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyi.....eflkkvepenae.......elskelkkfnvgedc. 92 +++hp r++ + + + + gl ++ e ++ +ka+ eel+++hse ++ + l++ + +n + ++ l +vg d ENSLOCP00000006280.1 513 NSTHPEHAGRIQSIWSRLQERGLRNQCESIRGRKATLEELQSVHSERHVllygtNPLNRLKLDNRKlagilsqRMFVMLPCGGVGVDNd 601 45688888899999999999*************************99873444456889999988876654431112222224444431 PP class-1.txt 93 Pvfdglfey.c.qlitGasleaakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellk..khkrvlyididlhhGDgv 175 + ++l+ + ++ +G+ e a ++ k+e + a+ G hha +s+ Gfc+ n + +a +l++ + +++l +d d+hhG+g ENSLOCP00000006280.1 602 TIWNELHTStAsRMAAGSVTELAFRVAKGELKngFAVVRPPG-HHADHSSPMGFCFFNSVAIAAKQLQQklSASKILIVDWDVHHGNGT 689 477777754131455666667888999887662255555555.************************9934457*************** PP class-1.txt 176 eeafyttdrvmtvsfhkyge.effPgtGdlsdvgaekgkyyavnvPlkdgid....DesyekifksviskvieafePeavvlqcGaDsl 259 +e fy+ v+ +s+h+y++ +ffPg+G ++vg++ g + vnv + g+d D +y + f++v+ ++ + f+P++v++ G D+ ENSLOCP00000006280.1 690 QEVFYNDPSVLYISLHRYDDgNFFPGSGGPTEVGTGPGVGFNVNVAWTGGLDppmgDAEYLAAFRTVVMPIAQEFSPDVVLVSSGFDAA 778 ******************9746***********************998887666669******************************98 PP class-1.txt 260 agD..rlgefnls 270 g +lg +++s ENSLOCP00000006280.1 779 EGHppPLGGYQVS 791 7752247777666 PP
|
Protein Sequence (Fasta) | MDLRVGQRLV RPGSETAMLT PLPHPLLLGP FPSPQPCAQI SQHQLHQQIR FNMEQRRREQ 60 EQEKQQELQQ LWHKDKSKQS AVASTAVKQK LQEVILKKQQ AALERTNSNP LSNPPVAYRA 120 LAPDPDVPPP SLMVPPPPQP PSDSPEDIPL RRTASEPNLK VKNKLKKHLG TRKSPLTRKE 180 SAPPTVKQRA PETMDSSPSS SSTPVSGCSS PNDSLPTENG VLPPTAGVSH EGDAEMGSLK 240 AARLPVLTGA APQVYMPVGL EDTTGHLSPR LQPVVILEPS GLISTPLVTV PGLGPMPLQF 300 APQLDRVAAL GPHKPLSRTR SEPLPQSPRP LHQQLLQQHQ HSQLLERLKQ QTHLGKLMSK 360 PSEKPRLRQI PSEDMDSEEA GLTDTHQRRP RAESLREAES SGAEGAGEQE QHQQINIQHA 420 LILNQQSLLW EKQKQLQQLR RHTAQMETLA VPMVLSAHRP LSRTQSSPAS ATITIPDKSL 480 ALPVQESPTK PRFTTGLVYD SQMLKHQCTC GDNSTHPEHA GRIQSIWSRL QERGLRNQCE 540 SIRGRKATLE ELQSVHSERH VLLYGTNPLN RLKLDNRKLA GILSQRMFVM LPCGGVGVDN 600 DTIWNELHTS TASRMAAGSV TELAFRVAKG ELKNGFAVVR PPGHHADHSS PMGFCFFNSV 660 AIAAKQLQQK LSASKILIVD WDVHHGNGTQ EVFYNDPSVL YISLHRYDDG NFFPGSGGPT 720 EVGTGPGVGF NVNVAWTGGL DPPMGDAEYL AAFRTVVMPI AQEFSPDVVL VSSGFDAAEG 780 HPPPLGGYQV SAKFCTIYIG ERLYAVGNGG RLVLALEGGH DLTAICDASE ACVNALLGNE 840 GEPLSQEVLR KRPSVNGVRS LERVLQVQGQ YWKSVLRFAS TVGLSFLEAQ KHDTEENDTV 900 TALASLSVGV NPALVITDKR PPDDPMEEDD DDDD 934Protein Fasta Sequence
>ENSLOCP00000006280.1|Class-I|Lepisosteus oculatus MDLRVGQRLVRPGSETAMLTPLPHPLLLGPFPSPQPCAQISQHQLHQQIRFNMEQRRREQEQEKQQELQQLWHKDKSKQSAVASTAVKQKLQEVILKKQQAALERTNSNPLSNPPVAYRALAPDPDVPPPSLMVPPPPQPPSDSPEDIPLRRTASEPNLKVKNKLKKHLGTRKSPLTRKESAPPTVKQRAPETMDSSPSSSSTPVSGCSSPNDSLPTENGVLPPTAGVSHEGDAEMGSLKAARLPVLTGAAPQVYMPVGLEDTTGHLSPRLQPVVILEPSGLISTPLVTVPGLGPMPLQFAPQLDRVAALGPHKPLSRTRSEPLPQSPRPLHQQLLQQHQHSQLLERLKQQTHLGKLMSKPSEKPRLRQIPSEDMDSEEAGLTDTHQRRPRAESLREAESSGAEGAGEQEQHQQINIQHALILNQQSLLWEKQKQLQQLRRHTAQMETLAVPMVLSAHRPLSRTQSSPASATITIPDKSLALPVQESPTKPRFTTGLVYDSQMLKHQCTCGDNSTHPEHAGRIQSIWSRLQERGLRNQCESIRGRKATLEELQSVHSERHVLLYGTNPLNRLKLDNRKLAGILSQRMFVMLPCGGVGVDNDTIWNELHTSTASRMAAGSVTELAFRVAKGELKNGFAVVRPPGHHADHSSPMGFCFFNSVAIAAKQLQQKLSASKILIVDWDVHHGNGTQEVFYNDPSVLYISLHRYDDGNFFPGSGGPTEVGTGPGVGFNVNVAWTGGLDPPMGDAEYLAAFRTVVMPIAQEFSPDVVLVSSGFDAAEGHPPPLGGYQVSAKFCTIYIGERLYAVGNGGRLVLALEGGHDLTAICDASEACVNALLGNEGEPLSQEVLRKRPSVNGVRSLERVLQVQGQYWKSVLRFASTVGLSFLEAQKHDTEENDTVTALASLSVGVNPALVITDKRPPDDPMEEDDDDDD
|
Nucleotide Sequence (Fasta) | ATGGACCTGC GCGTGGGCCA GCGGCTGGTG CGGCCCGGCT CGGAGACCGC CATGCTGACG 60 CCCCTGCCCC ACCCCCTGCT CCTCGGCCCG TTCCCCAGCC CCCAGCCCTG CGCGCAGATC 120 TCCCAGCACC AGCTGCACCA GCAGATCCGG TTTAACATGG AGCAGCGGCG ACGAGAGCAA 180 GAGCAGGAAA AACAGCAGGA ATTGCAGCAG CTGTGGCACA AGGACAAAAG CAAGCAGAGT 240 GCTGTGGCCA GTACAGCTGT CAAACAGAAA CTACAGGAAG TGATCCTCAA GAAACAGCAG 300 GCTGCCTTGG AGCGTACCAA CTCCAACCCC TTGAGCAACC CCCCTGTAGC CTACAGGGCG 360 CTGGCTCCGG ACCCCGATGT CCCCCCTCCC TCTCTGATGG TGCCCCCCCC ACCGCAGCCA 420 CCCAGCGACT CCCCAGAAGA CATTCCGCTG CGCCGGACAG CCTCCGAGCC CAACCTGAAG 480 GTGAAGAACA AACTGAAGAA GCACCTGGGC ACCAGGAAGA GCCCCCTGAC CCGCAAGGAG 540 AGCGCCCCTC CGACTGTGAA GCAGAGAGCC CCCGAGACTA TGGACTCCTC TCCCAGCAGC 600 AGCAGTACCC CCGTCTCCGG CTGCAGCTCC CCCAACGACA GCCTGCCCAC GGAGAACGGA 660 GTGCTACCCC CGACCGCTGG AGTGTCCCAT GAGGGCGATG CAGAAATGGG CTCCCTGAAA 720 GCAGCCCGGC TGCCCGTGCT GACGGGGGCG GCCCCCCAGG TGTACATGCC CGTGGGGCTG 780 GAGGACACGA CTGGGCACCT GTCGCCTCGC CTGCAGCCGG TGGTCATCCT GGAGCCCTCA 840 GGTCTGATTT CCACCCCCTT GGTCACCGTT CCAGGGCTGG GTCCCATGCC CCTGCAGTTC 900 GCCCCCCAGC TCGACAGGGT GGCCGCCCTG GGTCCCCACA AGCCCCTGAG CCGCACTCGC 960 TCGGAGCCGC TGCCCCAGAG CCCCCGGCCC CTCCACCAGC AGCTGCTGCA GCAGCACCAG 1020 CACAGCCAGC TGCTGGAGAG GCTCAAGCAG CAGACGCACC TGGGCAAGCT GATGTCCAAG 1080 CCCAGTGAGA AGCCTCGGCT CAGGCAGATC CCCTCAGAGG ACATGGATTC TGAGGAGGCG 1140 GGTTTGACCG ACACCCACCA GCGACGCCCC AGGGCGGAGT CACTACGGGA GGCGGAGTCT 1200 AGTGGAGCAG AGGGGGCGGG TGAACAGGAG CAGCACCAGC AGATAAACAT CCAGCATGCG 1260 CTTATTCTCA ATCAGCAGTC GTTACTCTGG GAGAAGCAGA AACAGCTCCA GCAGCTCCGC 1320 CGGCACACGG CACAGATGGA GACGCTGGCG GTTCCCATGG TGCTCAGCGC TCACCGCCCT 1380 CTGTCCCGCA CCCAGTCCTC CCCGGCCTCC GCCACCATCA CGATCCCGGA CAAGAGCCTC 1440 GCGCTGCCTG TCCAGGAATC GCCCACCAAG CCTCGCTTCA CCACAGGCCT TGTGTACGAC 1500 TCACAGATGC TGAAGCACCA GTGCACCTGC GGCGACAACA GCACTCACCC GGAGCATGCT 1560 GGGAGAATCC AGAGCATCTG GTCCAGACTA CAGGAGAGAG GGCTGAGGAA CCAGTGTGAG 1620 AGCATCCGGG GCAGGAAGGC CACGCTGGAG GAGCTGCAGT CCGTCCACTC GGAGCGCCAC 1680 GTCCTGTTGT ACGGCACCAA CCCCCTCAAT CGGCTCAAGC TGGACAACCG CAAGCTGGCC 1740 GGAATCCTGT CCCAGAGGAT GTTTGTGATG CTGCCCTGTG GGGGTGTTGG GGTGGATAAC 1800 GACACCATCT GGAACGAGCT TCACACATCC ACAGCCTCCC GCATGGCGGC TGGCAGTGTG 1860 ACCGAGTTGG CGTTCCGAGT GGCCAAGGGA GAGCTGAAGA ACGGTTTTGC AGTCGTCAGA 1920 CCACCAGGAC ACCACGCGGA CCACTCAAGC CCCATGGGAT TCTGCTTCTT CAACTCAGTG 1980 GCCATCGCCG CCAAACAGCT CCAGCAGAAA CTGAGTGCCA GCAAGATTCT CATCGTGGAC 2040 TGGGATGTGC ACCATGGCAA CGGTACCCAG GAGGTCTTTT ACAACGACCC CAGCGTGCTG 2100 TACATCTCGC TCCATCGCTA TGACGATGGG AACTTCTTCC CCGGGAGTGG GGGCCCAACT 2160 GAGGTGGGCA CTGGTCCTGG GGTGGGCTTC AATGTCAACG TGGCATGGAC AGGCGGTCTG 2220 GACCCTCCCA TGGGGGACGC GGAGTACCTG GCTGCTTTCA GGACTGTGGT GATGCCCATT 2280 GCCCAGGAGT TCTCCCCTGA CGTGGTCCTT GTGTCGTCCG GGTTTGATGC TGCCGAAGGT 2340 CACCCCCCGC CTCTTGGAGG TTACCAGGTG TCTGCAAAAT TTTGTACGAT TTATATTGGA 2400 GAACGCTTGT ATGCAGTAGG AAACGGGGGG AGGCTGGTGC TCGCGCTGGA GGGGGGCCAC 2460 GACCTGACGG CCATCTGCGA CGCCTCGGAG GCCTGCGTCA ACGCGTTGCT GGGCAATGAG 2520 GGGGAGCCCC TGTCCCAGGA GGTGCTGCGG AAGAGGCCCA GCGTTAACGG GGTGCGCTCG 2580 CTGGAGAGAG TGCTGCAAGT ACAGGGTCAG TACTGGAAGT CCGTCCTGCG GTTCGCCTCT 2640 ACAGTGGGTC TGTCCTTCCT GGAGGCTCAG AAACACGACA CGGAGGAGAA CGACACAGTC 2700 ACTGCTCTGG CCTCGCTCTC GGTGGGGGTC AACCCCGCAC TGGTCATCAC AGACAAGAGG 2760 CCTCCAGATG ACCCCATGGA AGAAGACGAT GATGATGATG AC
2803Nucleotide Fasta Sequence
>ENSLOCP00000006280.1|Class-I|Lepisosteus oculatus ATGGACCTGCGCGTGGGCCAGCGGCTGGTGCGGCCCGGCTCGGAGACCGCCATGCTGACGCCCCTGCCCCACCCCCTGCTCCTCGGCCCGTTCCCCAGCCCCCAGCCCTGCGCGCAGATCTCCCAGCACCAGCTGCACCAGCAGATCCGGTTTAACATGGAGCAGCGGCGACGAGAGCAAGAGCAGGAAAAACAGCAGGAATTGCAGCAGCTGTGGCACAAGGACAAAAGCAAGCAGAGTGCTGTGGCCAGTACAGCTGTCAAACAGAAACTACAGGAAGTGATCCTCAAGAAACAGCAGGCTGCCTTGGAGCGTACCAACTCCAACCCCTTGAGCAACCCCCCTGTAGCCTACAGGGCGCTGGCTCCGGACCCCGATGTCCCCCCTCCCTCTCTGATGGTGCCCCCCCCACCGCAGCCACCCAGCGACTCCCCAGAAGACATTCCGCTGCGCCGGACAGCCTCCGAGCCCAACCTGAAGGTGAAGAACAAACTGAAGAAGCACCTGGGCACCAGGAAGAGCCCCCTGACCCGCAAGGAGAGCGCCCCTCCGACTGTGAAGCAGAGAGCCCCCGAGACTATGGACTCCTCTCCCAGCAGCAGCAGTACCCCCGTCTCCGGCTGCAGCTCCCCCAACGACAGCCTGCCCACGGAGAACGGAGTGCTACCCCCGACCGCTGGAGTGTCCCATGAGGGCGATGCAGAAATGGGCTCCCTGAAAGCAGCCCGGCTGCCCGTGCTGACGGGGGCGGCCCCCCAGGTGTACATGCCCGTGGGGCTGGAGGACACGACTGGGCACCTGTCGCCTCGCCTGCAGCCGGTGGTCATCCTGGAGCCCTCAGGTCTGATTTCCACCCCCTTGGTCACCGTTCCAGGGCTGGGTCCCATGCCCCTGCAGTTCGCCCCCCAGCTCGACAGGGTGGCCGCCCTGGGTCCCCACAAGCCCCTGAGCCGCACTCGCTCGGAGCCGCTGCCCCAGAGCCCCCGGCCCCTCCACCAGCAGCTGCTGCAGCAGCACCAGCACAGCCAGCTGCTGGAGAGGCTCAAGCAGCAGACGCACCTGGGCAAGCTGATGTCCAAGCCCAGTGAGAAGCCTCGGCTCAGGCAGATCCCCTCAGAGGACATGGATTCTGAGGAGGCGGGTTTGACCGACACCCACCAGCGACGCCCCAGGGCGGAGTCACTACGGGAGGCGGAGTCTAGTGGAGCAGAGGGGGCGGGTGAACAGGAGCAGCACCAGCAGATAAACATCCAGCATGCGCTTATTCTCAATCAGCAGTCGTTACTCTGGGAGAAGCAGAAACAGCTCCAGCAGCTCCGCCGGCACACGGCACAGATGGAGACGCTGGCGGTTCCCATGGTGCTCAGCGCTCACCGCCCTCTGTCCCGCACCCAGTCCTCCCCGGCCTCCGCCACCATCACGATCCCGGACAAGAGCCTCGCGCTGCCTGTCCAGGAATCGCCCACCAAGCCTCGCTTCACCACAGGCCTTGTGTACGACTCACAGATGCTGAAGCACCAGTGCACCTGCGGCGACAACAGCACTCACCCGGAGCATGCTGGGAGAATCCAGAGCATCTGGTCCAGACTACAGGAGAGAGGGCTGAGGAACCAGTGTGAGAGCATCCGGGGCAGGAAGGCCACGCTGGAGGAGCTGCAGTCCGTCCACTCGGAGCGCCACGTCCTGTTGTACGGCACCAACCCCCTCAATCGGCTCAAGCTGGACAACCGCAAGCTGGCCGGAATCCTGTCCCAGAGGATGTTTGTGATGCTGCCCTGTGGGGGTGTTGGGGTGGATAACGACACCATCTGGAACGAGCTTCACACATCCACAGCCTCCCGCATGGCGGCTGGCAGTGTGACCGAGTTGGCGTTCCGAGTGGCCAAGGGAGAGCTGAAGAACGGTTTTGCAGTCGTCAGACCACCAGGACACCACGCGGACCACTCAAGCCCCATGGGATTCTGCTTCTTCAACTCAGTGGCCATCGCCGCCAAACAGCTCCAGCAGAAACTGAGTGCCAGCAAGATTCTCATCGTGGACTGGGATGTGCACCATGGCAACGGTACCCAGGAGGTCTTTTACAACGACCCCAGCGTGCTGTACATCTCGCTCCATCGCTATGACGATGGGAACTTCTTCCCCGGGAGTGGGGGCCCAACTGAGGTGGGCACTGGTCCTGGGGTGGGCTTCAATGTCAACGTGGCATGGACAGGCGGTCTGGACCCTCCCATGGGGGACGCGGAGTACCTGGCTGCTTTCAGGACTGTGGTGATGCCCATTGCCCAGGAGTTCTCCCCTGACGTGGTCCTTGTGTCGTCCGGGTTTGATGCTGCCGAAGGTCACCCCCCGCCTCTTGGAGGTTACCAGGTGTCTGCAAAATTTTGTACGATTTATATTGGAGAACGCTTGTATGCAGTAGGAAACGGGGGGAGGCTGGTGCTCGCGCTGGAGGGGGGCCACGACCTGACGGCCATCTGCGACGCCTCGGAGGCCTGCGTCAACGCGTTGCTGGGCAATGAGGGGGAGCCCCTGTCCCAGGAGGTGCTGCGGAAGAGGCCCAGCGTTAACGGGGTGCGCTCGCTGGAGAGAGTGCTGCAAGTACAGGGTCAGTACTGGAAGTCCGTCCTGCGGTTCGCCTCTACAGTGGGTCTGTCCTTCCTGGAGGCTCAGAAACACGACACGGAGGAGAACGACACAGTCACTGCTCTGGCCTCGCTCTCGGTGGGGGTCAACCCCGCACTGGTCATCACAGACAAGAGGCCTCCAGATGACCCCATGGAAGAAGACGATGATGATGATGAC
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |