WERAM Information


Tag Content
WERAM ID WERAM-Orla-0013
Ensembl Protein ID ENSORLP00000001341.1
Gene Name HDAC7
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSORLG00000001083.1 ENSORLT00000001342.1 ENSORLP00000001341.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 1.10e-147 491.6 23 879
HDAC Class-I 3.60e-31 109.2 23 848
Organism Oryzias latipes
Domain Profile
  HDAC Class-II

           class-2.txt 49 lkarkatkeelqlvHseehvelletaeklekeelesltv 87
+ r+ t++elq++ ++ ++ a++l k++l+++
ENSORLP00000001341.1 23 EQVRHETQQELQQLRHKDKSQQSAVASSLVKQKLQEVIL 61
345777888888777777777777777777777776443 PP
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles...... 84
+glvyd++mlkhq+ ++++++hpE+++Riq+i+srlqe+gl++++e++++rkat+eelq+vH+e+hv l++t+ +l++ +l++
ENSORLP00000001341.1 535 TGLVYDSQMLKHQCACGDNSSHPEHAGRIQSIWSRLQERGLRGQCESIRGRKATLEELQSVHTERHVLLYGTN-PLNRLKLDNrklagr 622
79***********************************************************************.*************** PP
class-2.txt 85 ................ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllq 157
++vd d+i++es++++a+r+a+G+v+el+++v+kgelkngfavvRPPGHHa++s++mGFC+fn+va+aak+lq
ENSORLP00000001341.1 623 trifsqrmftmlpcggVGVDNDTIWNESHTSTASRMAAGSVVELAFRVAKGELKNGFAVVRPPGHHADPSNPMGFCYFNSVAIAAKQLQ 711
***************************************************************************************** PP
class-2.txt 158 qklkvkkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafre 243
qkl+v+kilivDwDvHhGnGtqe+fy+d +vly+SlHRyd+g+ffp gsg++ evg+g+gegfnvN+aw+ggl mgdaeylaafr
ENSORLP00000001341.1 712 QKLSVSKILIVDWDVHHGNGTQEVFYNDRSVLYISLHRYDDGNFFP--GSGSPAEVGSGAGEGFNVNLAWTGGLdppMGDAEYLAAFRS 798
**********************************************..***************************************** PP
class-2.txt 244 vvlpiakeFkPdlvlvsaGfDaaeg..dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322
vv+pia+eF+Pd+vlvsaGfDaaeg +plgg++v+akc++ lt+ql++laggr++l+lEGG++l+ai++a+ea+v+aLlg
ENSORLP00000001341.1 799 VVMPIAQEFSPDVVLVSAGFDAAEGnpAPLGGYKVSAKCFGFLTHQLMSLAGGRLILALEGGHDLTAICDASEACVSALLG 879
*************************9999**************************************************96 PP

  HDAC Class-I

           class-1.txt  55 ellkfhseeyieflkkvepenae.............elskelkkfnvgedcPvfdglfey 101
e +++++++ ++ l++ ++++++ + k++k+ ++++ P + y
ENSORLP00000001341.1 23 EQVRHETQQELQQLRHKDKSQQSavasslvkqklqeVILKKQKQAALERTNPAHPVAYRY 82
333333333333333333333331111111111110333566666666666666666666 PP
class-1.txt 17 gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyi.....eflkkvepenae..........elsk..elkkfnv 88
+++hp r++ + + + + gl + e ++ +ka+ eel+++h+e ++ + l++ + +n + ++ + +v
ENSORLP00000001341.1 553 NSSHPEHAGRIQSIWSRLQERGLRGQCESIRGRKATLEELQSVHTERHVllygtNPLNRLKLDNRKlagrtrifsqRMFTmlPCGGVGV 641
45677778888888888888888888888889999999998888887763333345777888777777765533321111012223345 PP
class-1.txt 89 gedcPvfdglf.eycqlitGasleaakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellk..khkrvlyididlhhG 172
++d+ + +++ +G+ +e a ++ k+e + a+ G hha s+ Gfcy n + +a +l++ + +++l +d d+hhG
ENSORLP00000001341.1 642 DNDTIWNESHTsTASRMAAGSVVELAFRVAKGELKngFAVVRPPG-HHADPSNPMGFCYFNSVAIAAKQLQQklSVSKILIVDWDVHHG 729
555544443330445677888899999999988762245555544.************************9945568************ PP
class-1.txt 173 Dgveeafyttdrvmtvsfhkyge.effPgtGdlsdvgaekgkyyavnvPlkdgid....DesyekifksviskvieafePeavvlqcGa 256
+g +e fy+ v+ +s+h+y++ +ffPg+G+ +vg + g + vn+ + g+d D +y + f+sv+ ++ + f+P++v++ G
ENSORLP00000001341.1 730 NGTQEVFYNDRSVLYISLHRYDDgNFFPGSGSPAEVGSGAGEGFNVNLAWTGGLDppmgDAEYLAAFRSVVMPIAQEFSPDVVLVSAGF 818
*********************9746***********************988887655559***************************** PP
class-1.txt 257 DslagD..rlgefnlsikghaecvkfvksf 284
D+ g+ +lg +++s k ++ + + s
ENSORLP00000001341.1 819 DAAEGNpaPLGGYKVSAKCFGFLTHQLMSL 848
**9987336999999999888766666555 PP

Protein Sequence
(Fasta)
RTSFSHQQLH QQIRFNMEQR RREQVRHETQ QELQQLRHKD KSQQSAVASS LVKQKLQEVI 60
LKKQKQAALE RTNPAHPVAY RYAHLKKLGP DPSAPAQPLV SPPSQSSPES SEGTPLRRAA 120
SEPNLKVKNK LKKHLNTRKS PLTRKESAPP TVKHRVPDTL DSSPSSSSTP VSGCSSPNDS 180
LPCENGLLPS AGGLSHEVGE AHKMLLRDGT LSSFTIQSPS TLPTITLGLP ANSRADGEVS 240
PLKVSRVPMV TAGVSPVFLP ISREDQGGQM GPHLPVIILE SPGLVHPPLL TGRTVLVLTP 300
ADESLILMSN PSSSSSTVPS LDSVPLQFAH QLERLSPGGV QPHKPLSRTR SEPLPQTLHT 360
HLLQQQHNTQ LLERLKQQTH LGQVLIVRLN VFLSKQLMSK SSEKPRLHQI PSEDMDSEDG 420
GGTSPSEPAY HNRVRAGSLR EAETTSSKSH EEQLQHALIL NQSLLWEQQK QLQQLHRQMK 480
TLAVPVLPGG CSGGGGIHRP LSRTQSSPAS TSLTLPEKPL NLAAPEISSK PRFTTGLVYD 540
SQMLKHQCAC GDNSSHPEHA GRIQSIWSRL QERGLRGQCE SIRGRKATLE ELQSVHTERH 600
VLLYGTNPLN RLKLDNRKLA GRTRIFSQRM FTMLPCGGVG VDNDTIWNES HTSTASRMAA 660
GSVVELAFRV AKGELKNGFA VVRPPGHHAD PSNPMGFCYF NSVAIAAKQL QQKLSVSKIL 720
IVDWDVHHGN GTQEVFYNDR SVLYISLHRY DDGNFFPGSG SPAEVGSGAG EGFNVNLAWT 780
GGLDPPMGDA EYLAAFRSVV MPIAQEFSPD VVLVSAGFDA AEGNPAPLGG YKVSAKCFGF 840
LTHQLMSLAG GRLILALEGG HDLTAICDAS EACVSALLGM QDSMPEDVLL QKPNANAVRS 900
LQTVIQIQSQ FWQNVKAHSG TLGLSLLEAQ SRDCEETDAV NALASLSVGV MPNKSLQDEP 960
MEHDSDPL 968
Nucleotide Sequence
(Fasta)
CGCACCTCTT TCTCCCATCA GCAGCTGCAC CAGCAAATCC GGTTTAATAT GGAGCAGAGG 60
AGGCGGGAAC AAGTGCGCCA CGAGACGCAA CAGGAGCTGC AGCAGCTGAG ACACAAAGAC 120
AAAAGCCAGC AAAGTGCAGT GGCGAGTTCT CTGGTGAAGC AGAAGCTGCA GGAAGTGATC 180
CTCAAGAAGC AGAAACAGGC GGCGCTGGAA AGGACGAACC CTGCACATCC CGTCGCGTAC 240
AGGTACGCGC ACCTGAAAAA ACTGGGCCCG GACCCCAGCG CACCCGCCCA GCCTCTGGTC 300
TCACCTCCAT CACAGTCCTC ACCCGAGAGC TCAGAGGGGA CGCCACTGCG GCGAGCAGCA 360
TCTGAGCCCA ACCTGAAGGT GAAGAACAAG CTGAAGAAAC ACCTGAACAC CCGCAAGAGC 420
CCGCTCACCC GCAAAGAGAG CGCCCCGCCC ACCGTCAAGC ACAGAGTGCC GGACACGCTG 480
GATTCCTCCC CCAGCAGCAG CAGCACGCCG GTGTCCGGCT GCAGTTCCCC CAACGACAGT 540
CTGCCCTGCG AGAATGGACT GCTGCCCTCT GCAGGCGGCC TCTCACACGA GGTCGGTGAA 600
GCTCACAAGA TGCTGCTGAG AGACGGCACG CTGTCGAGCT TCACCATCCA GAGTCCCTCC 660
ACCCTTCCCA CCATCACGCT GGGGCTGCCG GCCAACTCCA GGGCGGACGG GGAGGTGTCG 720
CCCCTGAAGG TCAGTCGGGT TCCCATGGTT ACCGCAGGGG TTTCGCCCGT CTTCCTCCCC 780
ATCAGCAGAG AAGATCAAGG CGGGCAGATG GGTCCCCACC TGCCTGTCAT CATCCTGGAG 840
TCTCCTGGAC TGGTCCATCC TCCGCTTCTC ACGGGCCGAA CAGTTTTGGT ACTTACACCG 900
GCAGATGAAT CGCTGATTCT CATGTCTAAC CCATCTTCTT CTTCCTCCAC AGTTCCCTCC 960
TTGGATTCTG TTCCTCTTCA GTTTGCACAC CAGTTAGAAC GCCTGTCTCC AGGCGGGGTC 1020
CAGCCTCACA AGCCCCTGAG CCGGACTCGC TCGGAGCCTC TCCCTCAGAC GCTTCACACG 1080
CATCTGCTGC AGCAGCAGCA CAACACGCAG CTGCTGGAGA GGCTCAAACA GCAGACTCAC 1140
CTGGGACAAG TGTTAATCGT TCGTCTGAAT GTGTTTCTGT CCAAACAGCT GATGTCTAAG 1200
TCCAGCGAGA AGCCCAGGCT GCACCAGATC CCCTCGGAGG ACATGGACTC AGAGGACGGC 1260
GGCGGGACAT CACCCAGTGA GCCGGCGTAT CACAACAGAG TGAGGGCGGG GTCACTGAGG 1320
GAGGCGGAGA CGACGTCGTC CAAGAGCCAC GAGGAGCAGC TGCAGCACGC GCTGATACTC 1380
AACCAGTCGT TGCTATGGGA ACAGCAGAAG CAGCTGCAGC AGCTGCACCG GCAGATGAAG 1440
ACCCTAGCCG TTCCCGTGTT GCCAGGCGGC TGCAGCGGCG GCGGAGGGAT CCACCGCCCC 1500
CTGTCGCGCA CGCAGTCCTC GCCGGCCTCC ACCTCCCTCA CTCTGCCAGA GAAACCCCTG 1560
AACCTGGCGG CACCGGAGAT CAGCAGCAAG CCGCGCTTCA CCACAGGTTT AGTGTATGAC 1620
TCTCAGATGC TGAAACACCA ATGCGCATGT GGAGACAACA GCAGTCACCC AGAGCATGCT 1680
GGGAGAATAC AGAGCATCTG GTCCCGACTG CAAGAGAGAG GCTTGAGAGG ACAGTGTGAG 1740
AGTATTCGTG GACGTAAAGC CACGCTGGAG GAGCTGCAGT CCGTCCACAC CGAGCGCCAC 1800
GTGCTGCTGT ACGGCACCAA CCCGCTCAAC CGTCTCAAAC TCGACAACCG CAAACTGGCT 1860
GGTAGGACAA GAATCTTTTC TCAACGGATG TTTACGATGT TGCCATGCGG GGGAGTGGGG 1920
GTTGATAATG ACACCATCTG GAACGAGTCG CACACTTCTA CAGCGTCACG TATGGCGGCG 1980
GGCAGCGTGG TGGAGCTGGC CTTCAGGGTG GCCAAAGGAG AACTGAAGAA CGGCTTCGCT 2040
GTGGTCCGAC CGCCGGGTCA TCACGCTGAC CCCTCCAATC CCATGGGTTT TTGCTACTTC 2100
AATTCTGTGG CCATAGCAGC CAAGCAGCTG CAGCAAAAGC TCAGCGTCAG CAAGATCCTC 2160
ATCGTGGACT GGGATGTTCA CCATGGTAAC GGCACTCAGG AAGTATTTTA CAACGACCGG 2220
AGCGTCCTCT ACATCTCGCT TCATCGCTAT GACGACGGGA ACTTCTTCCC CGGGAGTGGG 2280
TCTCCCGCTG AGGTGGGCTC TGGAGCCGGA GAGGGCTTCA ACGTCAACTT GGCCTGGACC 2340
GGAGGTCTGG ACCCGCCCAT GGGAGATGCG GAGTACCTCG CCGCGTTCAG GTCTGTGGTG 2400
ATGCCCATTG CCCAGGAGTT CTCCCCAGAT GTTGTCCTGG TGTCGGCCGG GTTTGATGCT 2460
GCTGAGGGGA ACCCCGCTCC CCTGGGGGGG TACAAGGTTT CCGCCAAATG TTTTGGTTTC 2520
CTGACCCACC AGCTGATGTC TCTGGCCGGT GGGCGTCTTA TTTTAGCCCT GGAGGGGGGG 2580
CACGACCTCA CAGCCATCTG TGATGCATCC GAAGCCTGCG TTAGTGCTCT CCTGGGCATG 2640
CAAGATTCAA TGCCAGAAGA TGTTCTGCTC CAAAAGCCCA ACGCCAACGC AGTCCGGTCC 2700
CTCCAGACGG TCATACAGAT ACAAAGTCAG TTCTGGCAGA ACGTGAAGGC CCACAGTGGA 2760
ACGCTGGGCC TGTCGCTGCT GGAGGCTCAG AGCAGAGACT GCGAGGAAAC GGACGCCGTC 2820
AACGCTTTGG CATCGCTCTC AGTGGGAGTC ATGCCCAACA AGAGTCTCCA GGATGAGCCC 2880
ATGGAGCATG ACAGCGACCC CCTGTAG 2908
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orn-0108 ENSONIP00000011544.1 Oreochromis niloticus 81 0.0 1351
WERAM-Pof-0217 ENSPFOP00000017514.2 Poecilia formosa 79 0.0 1324
WERAM-Xim-0050 ENSXMAP00000004607.1 Xiphophorus maculatus 77 0.0 1302
WERAM-Ten-0061 ENSTNIP00000000291.1 Tetraodon nigroviridis 77 0.0 1211
WERAM-Tar-0145 ENSTRUP00000031264.1 Takifugu rubripes 72 0.0 1198
WERAM-Leo-0044 ENSLOCP00000006280.1 Lepisosteus oculatus 64 0.0 998
WERAM-Meg-0108 ENSMGAP00000010913.2 Meleagris gallopavo 57 0.0 920
WERAM-Anc-0160 ENSACAP00000015012.3 Anolis carolinensis 58 0.0 909
WERAM-Anp-0061 ENSAPLP00000006782.1 Anas platyrhynchos 55 0.0 902
WERAM-Gaga-0067 ENSGALP00000010190.4 Gallus gallus 57 0.0 896
WERAM-Lac-0191 ENSLACP00000021749.1 Latimeria chalumnae 58 0.0 863
WERAM-Pes-0124 ENSPSIP00000014863.1 Pelodiscus sinensis 57 0.0 859
WERAM-Sah-0025 ENSSHAP00000002837.1 Sarcophilus harrisii 54 0.0 813
WERAM-Xet-0073 ENSXETP00000023344.3 Xenopus tropicalis 54 0.0 811
WERAM-Fia-0129 ENSFALP00000010805.1 Ficedula albicollis 52 0.0 796
WERAM-Caf-0101 ENSCAFP00000013479.3 Canis familiaris 53 0.0 795
WERAM-Paa-0072 ENSPANP00000008610.1 Papio anubis 53 0.0 789
WERAM-Cap-0074 ENSCPOP00000005427.2 Cavia porcellus 52 0.0 788
WERAM-Eqc-0166 ENSECAP00000018277.1 Equus caballus 52 0.0 787
WERAM-Gog-0184 ENSGGOP00000016066.2 Gorilla gorilla 53 0.0 786
WERAM-Hos-0021 ENSP00000080059.7 Homo sapiens 52 0.0 785
WERAM-Pat-0040 ENSPTRP00000008320.5 Pan troglodytes 53 0.0 784
WERAM-Mup-0003 ENSMPUP00000000413.1 Mustela putorius furo 52 0.0 784
WERAM-Dan-0112 ENSDNOP00000014271.3 Dasypus novemcinctus 53 0.0 783
WERAM-Bot-0201 ENSBTAP00000038136.4 Bos taurus 53 0.0 782
WERAM-Fec-0138 ENSFCAP00000012982.3 Felis catus 53 0.0 781
WERAM-Dar-0240 ENSDARP00000132042.1 Danio rerio 85 0.0 779
WERAM-Nol-0194 ENSNLEP00000021748.1 Nomascus leucogenys 52 0.0 777
WERAM-Ict-0024 ENSSTOP00000001667.2 Ictidomys tridecemlineatus 52 0.0 776
WERAM-Ran-0240 ENSRNOP00000073744.1 Rattus norvegicus 53 0.0 774
WERAM-Tut-0143 ENSTTRP00000011934.1 Tursiops truncatus 52 0.0 769
WERAM-Myl-0009 ENSMLUP00000000824.2 Myotis lucifugus 51 0.0 763
WERAM-Prc-0083 ENSPCAP00000007167.1 Procavia capensis 53 0.0 763
WERAM-Ptv-0096 ENSPVAP00000008849.1 Pteropus vampyrus 52 0.0 760
WERAM-Aim-0131 ENSAMEP00000011965.1 Ailuropoda melanoleuca 47 0.0 760
WERAM-Chs-0068 ENSCSAP00000002314.1 Chlorocebus sabaeus 47 0.0 758
WERAM-Caj-0152 ENSCJAP00000019002.2 Callithrix jacchus 55 0.0 756
WERAM-Gaa-0079 ENSGACP00000010554.1 Gasterosteus aculeatus 50 0.0 751
WERAM-Mum-0046 ENSMUSP00000085744.5 Mus musculus 51 0.0 735
WERAM-Ova-0207 ENSOARP00000020819.1 Ovis aries 51 0.0 733
WERAM-Otg-0061 ENSOGAP00000004404.2 Otolemur garnettii 51 0.0 723
WERAM-Tag-0054 ENSTGUP00000003859.1 Taeniopygia guttata 62 0.0 705
WERAM-Mim-0087 ENSMICP00000008193.1 Microcebus murinus 51 0.0 702
WERAM-Sus-0169 ENSSSCP00000025173.1 Sus scrofa 72 0.0 691
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 72 0.0 690
WERAM-Loa-0107 ENSLAFP00000009167.2 Loxodonta africana 71 0.0 682
WERAM-Mam-0041 ENSMMUP00000007984.2 Macaca mulatta 44 0.0 669
WERAM-Poa-0042 ENSPPYP00000005074.1 Pongo abelii 53 0.0 666
WERAM-Pem-0041 ENSPMAP00000005402.1 Petromyzon marinus 69 0.0 665
WERAM-Asm-0202 ENSAMXP00000018862.1 Astyanax mexicanus 70 0.0 665
WERAM-Mae-0085 ENSMEUP00000008564.1 Macropus eugenii 68 0.0 646
WERAM-Ocp-0101 ENSOPRP00000009320.1 Ochotona princeps 50 0.0 645
WERAM-Mod-0095 ENSMODP00000032765.2 Monodelphis domestica 66 0.0 637
WERAM-Dio-0163 ENSDORP00000015416.1 Dipodomys ordii 67 5e-180 629
WERAM-Orc-0081 ENSOCUP00000007421.3 Oryctolagus cuniculus 67 1e-179 628
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 53 4e-178 622
WERAM-Ere-0008 ENSEEUP00000000313.1 Erinaceus europaeus 50 2e-176 617
WERAM-Gam-0063 ENSGMOP00000006368.1 Gadus morhua 64 4e-172 603
WERAM-Ect-0068 ENSETEP00000007698.1 Echinops telfairi 46 5e-166 582
WERAM-Soa-0055 ENSSARP00000005400.1 Sorex araneus 49 6e-159 559
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 56 3e-151 533
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 66 4e-151 533
WERAM-Tub-0137 ENSTBEP00000014805.1 Tupaia belangeri 68 2e-126 451
WERAM-Cii-0046 ENSCINP00000016829.3 Ciona intestinalis 50 1e-122 438
WERAM-Chh-0086 ENSCHOP00000009630.1 Choloepus hoffmanni 58 2e-117 421
WERAM-Cae-0008 C10E2.3a Caenorhabditis elegans 49 4e-115 413
WERAM-Cis-0060 ENSCSAVP00000013851.1 Ciona savignyi 53 4e-87 320
WERAM-Sem-0022 EFJ08599 Selaginella moellendorffii 43 4e-83 307
WERAM-Brr-0181 Bra035942.1-P Brassica rapa 43 3e-82 304
WERAM-Bro-0134 Bo7g098310.1 Brassica oleracea 44 4e-81 300
Created Date 25-Jun-2016