Tag |
Content |
WERAM ID |
WERAM-Orla-0013 |
Ensembl Protein ID |
ENSORLP00000001341.1 |
Gene Name |
HDAC7 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
1.10e-147 |
491.6 |
23 |
879 |
HDAC |
Class-I |
3.60e-31 |
109.2 |
23 |
848 |
|
Organism |
Oryzias latipes |
Domain Profile |
HDAC Class-II
class-2.txt 49 lkarkatkeelqlvHseehvelletaeklekeelesltv 87 + r+ t++elq++ ++ ++ a++l k++l+++ ENSORLP00000001341.1 23 EQVRHETQQELQQLRHKDKSQQSAVASSLVKQKLQEVIL 61 345777888888777777777777777777777776443 PP class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles...... 84 +glvyd++mlkhq+ ++++++hpE+++Riq+i+srlqe+gl++++e++++rkat+eelq+vH+e+hv l++t+ +l++ +l++ ENSORLP00000001341.1 535 TGLVYDSQMLKHQCACGDNSSHPEHAGRIQSIWSRLQERGLRGQCESIRGRKATLEELQSVHTERHVLLYGTN-PLNRLKLDNrklagr 622 79***********************************************************************.*************** PP class-2.txt 85 ................ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllq 157 ++vd d+i++es++++a+r+a+G+v+el+++v+kgelkngfavvRPPGHHa++s++mGFC+fn+va+aak+lq ENSORLP00000001341.1 623 trifsqrmftmlpcggVGVDNDTIWNESHTSTASRMAAGSVVELAFRVAKGELKNGFAVVRPPGHHADPSNPMGFCYFNSVAIAAKQLQ 711 ***************************************************************************************** PP class-2.txt 158 qklkvkkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafre 243 qkl+v+kilivDwDvHhGnGtqe+fy+d +vly+SlHRyd+g+ffp gsg++ evg+g+gegfnvN+aw+ggl mgdaeylaafr ENSORLP00000001341.1 712 QKLSVSKILIVDWDVHHGNGTQEVFYNDRSVLYISLHRYDDGNFFP--GSGSPAEVGSGAGEGFNVNLAWTGGLdppMGDAEYLAAFRS 798 **********************************************..***************************************** PP class-2.txt 244 vvlpiakeFkPdlvlvsaGfDaaeg..dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322 vv+pia+eF+Pd+vlvsaGfDaaeg +plgg++v+akc++ lt+ql++laggr++l+lEGG++l+ai++a+ea+v+aLlg ENSORLP00000001341.1 799 VVMPIAQEFSPDVVLVSAGFDAAEGnpAPLGGYKVSAKCFGFLTHQLMSLAGGRLILALEGGHDLTAICDASEACVSALLG 879 *************************9999**************************************************96 PP
HDAC Class-I
class-1.txt 55 ellkfhseeyieflkkvepenae.............elskelkkfnvgedcPvfdglfey 101 e +++++++ ++ l++ ++++++ + k++k+ ++++ P + y ENSORLP00000001341.1 23 EQVRHETQQELQQLRHKDKSQQSavasslvkqklqeVILKKQKQAALERTNPAHPVAYRY 82 333333333333333333333331111111111110333566666666666666666666 PP class-1.txt 17 gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyi.....eflkkvepenae..........elsk..elkkfnv 88 +++hp r++ + + + + gl + e ++ +ka+ eel+++h+e ++ + l++ + +n + ++ + +v ENSORLP00000001341.1 553 NSSHPEHAGRIQSIWSRLQERGLRGQCESIRGRKATLEELQSVHTERHVllygtNPLNRLKLDNRKlagrtrifsqRMFTmlPCGGVGV 641 45677778888888888888888888888889999999998888887763333345777888777777765533321111012223345 PP class-1.txt 89 gedcPvfdglf.eycqlitGasleaakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellk..khkrvlyididlhhG 172 ++d+ + +++ +G+ +e a ++ k+e + a+ G hha s+ Gfcy n + +a +l++ + +++l +d d+hhG ENSORLP00000001341.1 642 DNDTIWNESHTsTASRMAAGSVVELAFRVAKGELKngFAVVRPPG-HHADPSNPMGFCYFNSVAIAAKQLQQklSVSKILIVDWDVHHG 729 555544443330445677888899999999988762245555544.************************9945568************ PP class-1.txt 173 Dgveeafyttdrvmtvsfhkyge.effPgtGdlsdvgaekgkyyavnvPlkdgid....DesyekifksviskvieafePeavvlqcGa 256 +g +e fy+ v+ +s+h+y++ +ffPg+G+ +vg + g + vn+ + g+d D +y + f+sv+ ++ + f+P++v++ G ENSORLP00000001341.1 730 NGTQEVFYNDRSVLYISLHRYDDgNFFPGSGSPAEVGSGAGEGFNVNLAWTGGLDppmgDAEYLAAFRSVVMPIAQEFSPDVVLVSAGF 818 *********************9746***********************988887655559***************************** PP class-1.txt 257 DslagD..rlgefnlsikghaecvkfvksf 284 D+ g+ +lg +++s k ++ + + s ENSORLP00000001341.1 819 DAAEGNpaPLGGYKVSAKCFGFLTHQLMSL 848 **9987336999999999888766666555 PP
|
Protein Sequence (Fasta) | RTSFSHQQLH QQIRFNMEQR RREQVRHETQ QELQQLRHKD KSQQSAVASS LVKQKLQEVI 60 LKKQKQAALE RTNPAHPVAY RYAHLKKLGP DPSAPAQPLV SPPSQSSPES SEGTPLRRAA 120 SEPNLKVKNK LKKHLNTRKS PLTRKESAPP TVKHRVPDTL DSSPSSSSTP VSGCSSPNDS 180 LPCENGLLPS AGGLSHEVGE AHKMLLRDGT LSSFTIQSPS TLPTITLGLP ANSRADGEVS 240 PLKVSRVPMV TAGVSPVFLP ISREDQGGQM GPHLPVIILE SPGLVHPPLL TGRTVLVLTP 300 ADESLILMSN PSSSSSTVPS LDSVPLQFAH QLERLSPGGV QPHKPLSRTR SEPLPQTLHT 360 HLLQQQHNTQ LLERLKQQTH LGQVLIVRLN VFLSKQLMSK SSEKPRLHQI PSEDMDSEDG 420 GGTSPSEPAY HNRVRAGSLR EAETTSSKSH EEQLQHALIL NQSLLWEQQK QLQQLHRQMK 480 TLAVPVLPGG CSGGGGIHRP LSRTQSSPAS TSLTLPEKPL NLAAPEISSK PRFTTGLVYD 540 SQMLKHQCAC GDNSSHPEHA GRIQSIWSRL QERGLRGQCE SIRGRKATLE ELQSVHTERH 600 VLLYGTNPLN RLKLDNRKLA GRTRIFSQRM FTMLPCGGVG VDNDTIWNES HTSTASRMAA 660 GSVVELAFRV AKGELKNGFA VVRPPGHHAD PSNPMGFCYF NSVAIAAKQL QQKLSVSKIL 720 IVDWDVHHGN GTQEVFYNDR SVLYISLHRY DDGNFFPGSG SPAEVGSGAG EGFNVNLAWT 780 GGLDPPMGDA EYLAAFRSVV MPIAQEFSPD VVLVSAGFDA AEGNPAPLGG YKVSAKCFGF 840 LTHQLMSLAG GRLILALEGG HDLTAICDAS EACVSALLGM QDSMPEDVLL QKPNANAVRS 900 LQTVIQIQSQ FWQNVKAHSG TLGLSLLEAQ SRDCEETDAV NALASLSVGV MPNKSLQDEP 960 MEHDSDPL 968Protein Fasta Sequence
>ENSORLP00000001341.1|Class-I|Oryzias latipes RTSFSHQQLHQQIRFNMEQRRREQVRHETQQELQQLRHKDKSQQSAVASSLVKQKLQEVILKKQKQAALERTNPAHPVAYRYAHLKKLGPDPSAPAQPLVSPPSQSSPESSEGTPLRRAASEPNLKVKNKLKKHLNTRKSPLTRKESAPPTVKHRVPDTLDSSPSSSSTPVSGCSSPNDSLPCENGLLPSAGGLSHEVGEAHKMLLRDGTLSSFTIQSPSTLPTITLGLPANSRADGEVSPLKVSRVPMVTAGVSPVFLPISREDQGGQMGPHLPVIILESPGLVHPPLLTGRTVLVLTPADESLILMSNPSSSSSTVPSLDSVPLQFAHQLERLSPGGVQPHKPLSRTRSEPLPQTLHTHLLQQQHNTQLLERLKQQTHLGQVLIVRLNVFLSKQLMSKSSEKPRLHQIPSEDMDSEDGGGTSPSEPAYHNRVRAGSLREAETTSSKSHEEQLQHALILNQSLLWEQQKQLQQLHRQMKTLAVPVLPGGCSGGGGIHRPLSRTQSSPASTSLTLPEKPLNLAAPEISSKPRFTTGLVYDSQMLKHQCACGDNSSHPEHAGRIQSIWSRLQERGLRGQCESIRGRKATLEELQSVHTERHVLLYGTNPLNRLKLDNRKLAGRTRIFSQRMFTMLPCGGVGVDNDTIWNESHTSTASRMAAGSVVELAFRVAKGELKNGFAVVRPPGHHADPSNPMGFCYFNSVAIAAKQLQQKLSVSKILIVDWDVHHGNGTQEVFYNDRSVLYISLHRYDDGNFFPGSGSPAEVGSGAGEGFNVNLAWTGGLDPPMGDAEYLAAFRSVVMPIAQEFSPDVVLVSAGFDAAEGNPAPLGGYKVSAKCFGFLTHQLMSLAGGRLILALEGGHDLTAICDASEACVSALLGMQDSMPEDVLLQKPNANAVRSLQTVIQIQSQFWQNVKAHSGTLGLSLLEAQSRDCEETDAVNALASLSVGVMPNKSLQDEPMEHDSDPL
|
Nucleotide Sequence (Fasta) | CGCACCTCTT TCTCCCATCA GCAGCTGCAC CAGCAAATCC GGTTTAATAT GGAGCAGAGG 60 AGGCGGGAAC AAGTGCGCCA CGAGACGCAA CAGGAGCTGC AGCAGCTGAG ACACAAAGAC 120 AAAAGCCAGC AAAGTGCAGT GGCGAGTTCT CTGGTGAAGC AGAAGCTGCA GGAAGTGATC 180 CTCAAGAAGC AGAAACAGGC GGCGCTGGAA AGGACGAACC CTGCACATCC CGTCGCGTAC 240 AGGTACGCGC ACCTGAAAAA ACTGGGCCCG GACCCCAGCG CACCCGCCCA GCCTCTGGTC 300 TCACCTCCAT CACAGTCCTC ACCCGAGAGC TCAGAGGGGA CGCCACTGCG GCGAGCAGCA 360 TCTGAGCCCA ACCTGAAGGT GAAGAACAAG CTGAAGAAAC ACCTGAACAC CCGCAAGAGC 420 CCGCTCACCC GCAAAGAGAG CGCCCCGCCC ACCGTCAAGC ACAGAGTGCC GGACACGCTG 480 GATTCCTCCC CCAGCAGCAG CAGCACGCCG GTGTCCGGCT GCAGTTCCCC CAACGACAGT 540 CTGCCCTGCG AGAATGGACT GCTGCCCTCT GCAGGCGGCC TCTCACACGA GGTCGGTGAA 600 GCTCACAAGA TGCTGCTGAG AGACGGCACG CTGTCGAGCT TCACCATCCA GAGTCCCTCC 660 ACCCTTCCCA CCATCACGCT GGGGCTGCCG GCCAACTCCA GGGCGGACGG GGAGGTGTCG 720 CCCCTGAAGG TCAGTCGGGT TCCCATGGTT ACCGCAGGGG TTTCGCCCGT CTTCCTCCCC 780 ATCAGCAGAG AAGATCAAGG CGGGCAGATG GGTCCCCACC TGCCTGTCAT CATCCTGGAG 840 TCTCCTGGAC TGGTCCATCC TCCGCTTCTC ACGGGCCGAA CAGTTTTGGT ACTTACACCG 900 GCAGATGAAT CGCTGATTCT CATGTCTAAC CCATCTTCTT CTTCCTCCAC AGTTCCCTCC 960 TTGGATTCTG TTCCTCTTCA GTTTGCACAC CAGTTAGAAC GCCTGTCTCC AGGCGGGGTC 1020 CAGCCTCACA AGCCCCTGAG CCGGACTCGC TCGGAGCCTC TCCCTCAGAC GCTTCACACG 1080 CATCTGCTGC AGCAGCAGCA CAACACGCAG CTGCTGGAGA GGCTCAAACA GCAGACTCAC 1140 CTGGGACAAG TGTTAATCGT TCGTCTGAAT GTGTTTCTGT CCAAACAGCT GATGTCTAAG 1200 TCCAGCGAGA AGCCCAGGCT GCACCAGATC CCCTCGGAGG ACATGGACTC AGAGGACGGC 1260 GGCGGGACAT CACCCAGTGA GCCGGCGTAT CACAACAGAG TGAGGGCGGG GTCACTGAGG 1320 GAGGCGGAGA CGACGTCGTC CAAGAGCCAC GAGGAGCAGC TGCAGCACGC GCTGATACTC 1380 AACCAGTCGT TGCTATGGGA ACAGCAGAAG CAGCTGCAGC AGCTGCACCG GCAGATGAAG 1440 ACCCTAGCCG TTCCCGTGTT GCCAGGCGGC TGCAGCGGCG GCGGAGGGAT CCACCGCCCC 1500 CTGTCGCGCA CGCAGTCCTC GCCGGCCTCC ACCTCCCTCA CTCTGCCAGA GAAACCCCTG 1560 AACCTGGCGG CACCGGAGAT CAGCAGCAAG CCGCGCTTCA CCACAGGTTT AGTGTATGAC 1620 TCTCAGATGC TGAAACACCA ATGCGCATGT GGAGACAACA GCAGTCACCC AGAGCATGCT 1680 GGGAGAATAC AGAGCATCTG GTCCCGACTG CAAGAGAGAG GCTTGAGAGG ACAGTGTGAG 1740 AGTATTCGTG GACGTAAAGC CACGCTGGAG GAGCTGCAGT CCGTCCACAC CGAGCGCCAC 1800 GTGCTGCTGT ACGGCACCAA CCCGCTCAAC CGTCTCAAAC TCGACAACCG CAAACTGGCT 1860 GGTAGGACAA GAATCTTTTC TCAACGGATG TTTACGATGT TGCCATGCGG GGGAGTGGGG 1920 GTTGATAATG ACACCATCTG GAACGAGTCG CACACTTCTA CAGCGTCACG TATGGCGGCG 1980 GGCAGCGTGG TGGAGCTGGC CTTCAGGGTG GCCAAAGGAG AACTGAAGAA CGGCTTCGCT 2040 GTGGTCCGAC CGCCGGGTCA TCACGCTGAC CCCTCCAATC CCATGGGTTT TTGCTACTTC 2100 AATTCTGTGG CCATAGCAGC CAAGCAGCTG CAGCAAAAGC TCAGCGTCAG CAAGATCCTC 2160 ATCGTGGACT GGGATGTTCA CCATGGTAAC GGCACTCAGG AAGTATTTTA CAACGACCGG 2220 AGCGTCCTCT ACATCTCGCT TCATCGCTAT GACGACGGGA ACTTCTTCCC CGGGAGTGGG 2280 TCTCCCGCTG AGGTGGGCTC TGGAGCCGGA GAGGGCTTCA ACGTCAACTT GGCCTGGACC 2340 GGAGGTCTGG ACCCGCCCAT GGGAGATGCG GAGTACCTCG CCGCGTTCAG GTCTGTGGTG 2400 ATGCCCATTG CCCAGGAGTT CTCCCCAGAT GTTGTCCTGG TGTCGGCCGG GTTTGATGCT 2460 GCTGAGGGGA ACCCCGCTCC CCTGGGGGGG TACAAGGTTT CCGCCAAATG TTTTGGTTTC 2520 CTGACCCACC AGCTGATGTC TCTGGCCGGT GGGCGTCTTA TTTTAGCCCT GGAGGGGGGG 2580 CACGACCTCA CAGCCATCTG TGATGCATCC GAAGCCTGCG TTAGTGCTCT CCTGGGCATG 2640 CAAGATTCAA TGCCAGAAGA TGTTCTGCTC CAAAAGCCCA ACGCCAACGC AGTCCGGTCC 2700 CTCCAGACGG TCATACAGAT ACAAAGTCAG TTCTGGCAGA ACGTGAAGGC CCACAGTGGA 2760 ACGCTGGGCC TGTCGCTGCT GGAGGCTCAG AGCAGAGACT GCGAGGAAAC GGACGCCGTC 2820 AACGCTTTGG CATCGCTCTC AGTGGGAGTC ATGCCCAACA AGAGTCTCCA GGATGAGCCC 2880 ATGGAGCATG ACAGCGACCC CCTGTAG
2908Nucleotide Fasta Sequence
>ENSORLP00000001341.1|Class-I|Oryzias latipes CGCACCTCTTTCTCCCATCAGCAGCTGCACCAGCAAATCCGGTTTAATATGGAGCAGAGGAGGCGGGAACAAGTGCGCCACGAGACGCAACAGGAGCTGCAGCAGCTGAGACACAAAGACAAAAGCCAGCAAAGTGCAGTGGCGAGTTCTCTGGTGAAGCAGAAGCTGCAGGAAGTGATCCTCAAGAAGCAGAAACAGGCGGCGCTGGAAAGGACGAACCCTGCACATCCCGTCGCGTACAGGTACGCGCACCTGAAAAAACTGGGCCCGGACCCCAGCGCACCCGCCCAGCCTCTGGTCTCACCTCCATCACAGTCCTCACCCGAGAGCTCAGAGGGGACGCCACTGCGGCGAGCAGCATCTGAGCCCAACCTGAAGGTGAAGAACAAGCTGAAGAAACACCTGAACACCCGCAAGAGCCCGCTCACCCGCAAAGAGAGCGCCCCGCCCACCGTCAAGCACAGAGTGCCGGACACGCTGGATTCCTCCCCCAGCAGCAGCAGCACGCCGGTGTCCGGCTGCAGTTCCCCCAACGACAGTCTGCCCTGCGAGAATGGACTGCTGCCCTCTGCAGGCGGCCTCTCACACGAGGTCGGTGAAGCTCACAAGATGCTGCTGAGAGACGGCACGCTGTCGAGCTTCACCATCCAGAGTCCCTCCACCCTTCCCACCATCACGCTGGGGCTGCCGGCCAACTCCAGGGCGGACGGGGAGGTGTCGCCCCTGAAGGTCAGTCGGGTTCCCATGGTTACCGCAGGGGTTTCGCCCGTCTTCCTCCCCATCAGCAGAGAAGATCAAGGCGGGCAGATGGGTCCCCACCTGCCTGTCATCATCCTGGAGTCTCCTGGACTGGTCCATCCTCCGCTTCTCACGGGCCGAACAGTTTTGGTACTTACACCGGCAGATGAATCGCTGATTCTCATGTCTAACCCATCTTCTTCTTCCTCCACAGTTCCCTCCTTGGATTCTGTTCCTCTTCAGTTTGCACACCAGTTAGAACGCCTGTCTCCAGGCGGGGTCCAGCCTCACAAGCCCCTGAGCCGGACTCGCTCGGAGCCTCTCCCTCAGACGCTTCACACGCATCTGCTGCAGCAGCAGCACAACACGCAGCTGCTGGAGAGGCTCAAACAGCAGACTCACCTGGGACAAGTGTTAATCGTTCGTCTGAATGTGTTTCTGTCCAAACAGCTGATGTCTAAGTCCAGCGAGAAGCCCAGGCTGCACCAGATCCCCTCGGAGGACATGGACTCAGAGGACGGCGGCGGGACATCACCCAGTGAGCCGGCGTATCACAACAGAGTGAGGGCGGGGTCACTGAGGGAGGCGGAGACGACGTCGTCCAAGAGCCACGAGGAGCAGCTGCAGCACGCGCTGATACTCAACCAGTCGTTGCTATGGGAACAGCAGAAGCAGCTGCAGCAGCTGCACCGGCAGATGAAGACCCTAGCCGTTCCCGTGTTGCCAGGCGGCTGCAGCGGCGGCGGAGGGATCCACCGCCCCCTGTCGCGCACGCAGTCCTCGCCGGCCTCCACCTCCCTCACTCTGCCAGAGAAACCCCTGAACCTGGCGGCACCGGAGATCAGCAGCAAGCCGCGCTTCACCACAGGTTTAGTGTATGACTCTCAGATGCTGAAACACCAATGCGCATGTGGAGACAACAGCAGTCACCCAGAGCATGCTGGGAGAATACAGAGCATCTGGTCCCGACTGCAAGAGAGAGGCTTGAGAGGACAGTGTGAGAGTATTCGTGGACGTAAAGCCACGCTGGAGGAGCTGCAGTCCGTCCACACCGAGCGCCACGTGCTGCTGTACGGCACCAACCCGCTCAACCGTCTCAAACTCGACAACCGCAAACTGGCTGGTAGGACAAGAATCTTTTCTCAACGGATGTTTACGATGTTGCCATGCGGGGGAGTGGGGGTTGATAATGACACCATCTGGAACGAGTCGCACACTTCTACAGCGTCACGTATGGCGGCGGGCAGCGTGGTGGAGCTGGCCTTCAGGGTGGCCAAAGGAGAACTGAAGAACGGCTTCGCTGTGGTCCGACCGCCGGGTCATCACGCTGACCCCTCCAATCCCATGGGTTTTTGCTACTTCAATTCTGTGGCCATAGCAGCCAAGCAGCTGCAGCAAAAGCTCAGCGTCAGCAAGATCCTCATCGTGGACTGGGATGTTCACCATGGTAACGGCACTCAGGAAGTATTTTACAACGACCGGAGCGTCCTCTACATCTCGCTTCATCGCTATGACGACGGGAACTTCTTCCCCGGGAGTGGGTCTCCCGCTGAGGTGGGCTCTGGAGCCGGAGAGGGCTTCAACGTCAACTTGGCCTGGACCGGAGGTCTGGACCCGCCCATGGGAGATGCGGAGTACCTCGCCGCGTTCAGGTCTGTGGTGATGCCCATTGCCCAGGAGTTCTCCCCAGATGTTGTCCTGGTGTCGGCCGGGTTTGATGCTGCTGAGGGGAACCCCGCTCCCCTGGGGGGGTACAAGGTTTCCGCCAAATGTTTTGGTTTCCTGACCCACCAGCTGATGTCTCTGGCCGGTGGGCGTCTTATTTTAGCCCTGGAGGGGGGGCACGACCTCACAGCCATCTGTGATGCATCCGAAGCCTGCGTTAGTGCTCTCCTGGGCATGCAAGATTCAATGCCAGAAGATGTTCTGCTCCAAAAGCCCAACGCCAACGCAGTCCGGTCCCTCCAGACGGTCATACAGATACAAAGTCAGTTCTGGCAGAACGTGAAGGCCCACAGTGGAACGCTGGGCCTGTCGCTGCTGGAGGCTCAGAGCAGAGACTGCGAGGAAACGGACGCCGTCAACGCTTTGGCATCGCTCTCAGTGGGAGTCATGCCCAACAAGAGTCTCCAGGATGAGCCCATGGAGCATGACAGCGACCCCCTGTAG
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |