Tag |
Content |
WERAM ID |
WERAM-Bro-0134 |
Ensembl Protein ID |
Bo7g098310.1 |
Gene Name |
|
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
2.40e-132 |
442.5 |
23 |
344 |
HDAC |
Class-I |
2.00e-34 |
121.1 |
24 |
335 |
|
Organism |
Brassica oleracea |
Domain Profile |
HDAC Class-II
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletae.klekeelesltvdsdsiylesk 97 +glvyde+m+kh+++++++ hpE+p+Ri+ i+++lq ag+ ++++ + ++ka++++lqlvH+++hv+ +++ + k+++ + ++++++ +siyl+ + Bo7g098310.1 23 VGLVYDETMCKHDTPNGED--HPECPDRIRVIWEKLQLAGVSQRCVVFGGSKAEDKHLQLVHTKDHVSVVKSLStKKKDYRRNRIASQWNSIYLNGS 117 78***************99..***************************************************998889999999************* PP class-2.txt 98 sikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklk...vkkilivDwDvHhGnGtqeifykdpkvlyl 191 s++aa la+G+v+el++kv++gel++g+a+vRPPGHHae+++amGFClfnnvavaa++l+++ + vkkilivDwDvHhGnGtq++f+kdp+vl++ Bo7g098310.1 118 SSEAAFLAAGSVVELAEKVAEGELDCGYAIVRPPGHHAEPDEAMGFCLFNNVAVAASYLLDERPelgVKKILIVDWDVHHGNGTQKMFWKDPRVLFF 214 ************************************************************9887778****************************** PP class-2.txt 192 SlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgglsvtakcyatltkql 288 S+HR+++g f+p+ ++g+++ vgeg+gegfn+Nv+w++g +gda+ylaa++++++p+akeF+Pd++l+saGfDaa gdplgg++vt+ +y+ + k+l Bo7g098310.1 215 SVHRHEHGGFYPAGDDGDYNMVGEGPGEGFNINVPWEQGRCGDADYLAAWDHILIPVAKEFNPDIILLSAGFDAAIGDPLGGCRVTPYGYSVMLKKL 311 ************************************************************************************************* PP class-2.txt 289 lklaggrvvlvlEGGynlkaiaeaveavvkaLl 321 +++a+g++vl+lEGGynl++ia+++ a+v++Ll Bo7g098310.1 312 MEFAKGKIVLALEGGYNLDSIAKSSLACVQVLL 344 ********************************8 PP
HDAC Class-I
class-1.txt 4 ayaydedvgeyhy..gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeels.kelkkfnvgedcPvfdg 97 +yde++ ++ + g++hp p r++++ e + g+s++ ++ +ka+ ++l+ +h++++++++k+ ++++++ + +++n + + Bo7g098310.1 24 GLVYDETMCKHDTpnGEDHPECPDRIRVIWEKLQLAGVSQRCVVFGGSKAEDKHLQLVHTKDHVSVVKSLSTKKKDYRRnRIASQWNSIY---LNGS 117 556777776665444999*************9999**********************************999888754413445555322...3333 PP class-1.txt 98 lfeycqlitGasleaakkLnkkeadi..ainwaGGlhhakkseasGfcyvnDivlailellkk.....hkrvlyididlhhGDgveeafyttdrvmt 187 e + l +G+ +e a+k+ ++e d ai G hha +ea Gfc n++ +a ll + k++l +d d+hhG+g ++ f + rv+ Bo7g098310.1 118 SSEAAFLAAGSVVELAEKVAEGELDCgyAIVRPPG-HHAEPDEAMGFCLFNNVAVAASYLLDErpelgVKKILIVDWDVHHGNGTQKMFWKDPRVLF 213 456667899999*********99887225555555.********************99999742233368*************************** PP class-1.txt 188 vsfhkyge.effPg..tGdlsdvgaekgkyyavnvPlkdg.idDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkf 280 s+h++++ +f+P+ Gd + vg++ g + +nvP ++g + D y + +++ +v + f+P++++l G D+ gD+lg ++ g++ ++k Bo7g098310.1 214 FSVHRHEHgGFYPAgdDGDYNMVGEGPGEGFNINVPWEQGrCGDADYLAAWDHILIPVAKEFNPDIILLSAGFDAAIGDPLGGCRVTPYGYSVMLKK 310 *****99735999733599999****************99799****************************************************** PP class-1.txt 281 vksf.nlpllvlGGGGYtlrnvaRc 304 + +f + ++++ GGY+l +a+ Bo7g098310.1 311 LMEFaKGKIVLALEGGYNLDSIAKS 335 ****5556666679*****999975 PP
|
Protein Sequence (Fasta) | MAMAGESSNN NYRDCDGKSH RKVGLVYDET MCKHDTPNGE DHPECPDRIR VIWEKLQLAG 60 VSQRCVVFGG SKAEDKHLQL VHTKDHVSVV KSLSTKKKDY RRNRIASQWN SIYLNGSSSE 120 AAFLAAGSVV ELAEKVAEGE LDCGYAIVRP PGHHAEPDEA MGFCLFNNVA VAASYLLDER 180 PELGVKKILI VDWDVHHGNG TQKMFWKDPR VLFFSVHRHE HGGFYPAGDD GDYNMVGEGP 240 GEGFNINVPW EQGRCGDADY LAAWDHILIP VAKEFNPDII LLSAGFDAAI GDPLGGCRVT 300 PYGYSVMLKK LMEFAKGKIV LALEGGYNLD SIAKSSLACV QVLLEDKPIQ GSSEAYPFES 360 TWRVIQAVRK KLSAYWPSLA DVLSSKLIDQ KTPTPIIVFS SSDSETEDYA DDILDQMSRL 420 NIENHHVDTV STSWRRDLSK VDVWYASFGS NMWKPRFLCY IQGGQVEGMK KVCVGSMDKT 480 PPKQIMWESF PHRLFFGRES SVTWGVGGVA FINPLTNLND QTHMCLYRIT LEQFNDVLFQ 540 ENGLKVDSDS PLFGLDTLQL VEKKGSIPLA SGGWYGNIVC LGKECDIPIL TMTCTLSAVE 600 KFKSGEIPLR PPSEAYANTM IRGLVEGGRL SEEEAKAYIH NAASKPL 647Protein Fasta Sequence
>Bo7g098310.1|Class-I|Brassica oleracea MAMAGESSNNNYRDCDGKSHRKVGLVYDETMCKHDTPNGEDHPECPDRIRVIWEKLQLAGVSQRCVVFGGSKAEDKHLQLVHTKDHVSVVKSLSTKKKDYRRNRIASQWNSIYLNGSSSEAAFLAAGSVVELAEKVAEGELDCGYAIVRPPGHHAEPDEAMGFCLFNNVAVAASYLLDERPELGVKKILIVDWDVHHGNGTQKMFWKDPRVLFFSVHRHEHGGFYPAGDDGDYNMVGEGPGEGFNINVPWEQGRCGDADYLAAWDHILIPVAKEFNPDIILLSAGFDAAIGDPLGGCRVTPYGYSVMLKKLMEFAKGKIVLALEGGYNLDSIAKSSLACVQVLLEDKPIQGSSEAYPFESTWRVIQAVRKKLSAYWPSLADVLSSKLIDQKTPTPIIVFSSSDSETEDYADDILDQMSRLNIENHHVDTVSTSWRRDLSKVDVWYASFGSNMWKPRFLCYIQGGQVEGMKKVCVGSMDKTPPKQIMWESFPHRLFFGRESSVTWGVGGVAFINPLTNLNDQTHMCLYRITLEQFNDVLFQENGLKVDSDSPLFGLDTLQLVEKKGSIPLASGGWYGNIVCLGKECDIPILTMTCTLSAVEKFKSGEIPLRPPSEAYANTMIRGLVEGGRLSEEEAKAYIHNAASKPL
|
Nucleotide Sequence (Fasta) | ATGGCAATGG CCGGTGAATC TTCTAATAAC AACTACAGAG ACTGTGACGG GAAGAGTCAT 60 CGAAAGGTGG GTCTTGTCTA TGACGAGACG ATGTGCAAAC ACGACACACC TAACGGCGAG 120 GATCACCCTG AGTGTCCTGA TCGCATCAGA GTTATCTGGG AGAAGCTCCA GCTCGCCGGA 180 GTCTCTCAAA GATGTGTGGT TTTTGGTGGT AGCAAAGCTG AAGACAAGCA TCTCCAATTG 240 GTTCACACAA AGGACCATGT TAGTGTAGTT AAGAGTTTAA GCACAAAGAA GAAAGATTAC 300 CGGAGAAACA GGATTGCTTC ACAGTGGAAT TCAATATATC TGAATGGAAG TTCATCTGAA 360 GCCGCGTTTC TTGCAGCTGG ATCTGTTGTA GAGTTGGCGG AGAAAGTTGC AGAAGGAGAG 420 TTGGATTGTG GGTATGCTAT TGTCAGGCCC CCAGGGCACC ATGCTGAGCC AGATGAAGCT 480 ATGGGTTTCT GTTTGTTCAA CAACGTAGCA GTCGCTGCTA GCTATTTACT TGATGAAAGA 540 CCTGAACTAG GTGTCAAGAA GATTCTGATT GTTGATTGGG ATGTCCATCA TGGAAATGGC 600 ACGCAGAAGA TGTTCTGGAA AGATCCTCGT GTACTGTTTT TCTCTGTTCA CAGGCACGAA 660 CACGGAGGCT TCTATCCAGC GGGTGATGAT GGAGACTACA ACATGGTTGG GGAAGGTCCA 720 GGTGAAGGGT TTAACATAAA CGTTCCATGG GAACAAGGAA GATGCGGAGA TGCAGATTAT 780 CTTGCCGCAT GGGACCATAT TTTGATTCCT GTGGCGAAGG AGTTTAATCC TGATATTATT 840 TTGTTATCAG CTGGATTTGA TGCAGCTATT GGTGATCCAC TTGGGGGCTG TCGTGTAACA 900 CCATATGGAT ATTCAGTTAT GTTGAAGAAG CTGATGGAGT TTGCAAAAGG AAAGATTGTG 960 TTGGCGTTAG AGGGAGGGTA CAATCTTGAC TCAATTGCAA AGTCTTCACT GGCATGTGTC 1020 CAAGTCTTGC TTGAAGACAA ACCAATTCAA GGTTCTTCTG AAGCATACCC ATTCGAGTCT 1080 ACATGGCGTG TCATACAAGC GGTACGAAAG AAGCTGTCTG CATATTGGCC TTCACTTGCA 1140 GATGTATTAT CATCGAAGCT CATTGATCAG AAAACTCCCA CTCCAATTAT TGTTTTCTCA 1200 AGCTCCGACT CTGAAACTGA AGACTACGCT GATGATATCC TAGATCAAAT GTCGAGACTC 1260 AACATTGAAA ACCACCACGT AGATACAGTT TCTACATCTT GGAGAAGAGA TCTCTCAAAA 1320 GTTGATGTCT GGTATGCCTC TTTTGGATCC AACATGTGGA AACCAAGGTT CCTTTGCTAT 1380 ATTCAAGGGG GACAAGTAGA GGGAATGAAA AAGGTCTGCG TTGGTTCAAT GGATAAAACT 1440 CCACCAAAGC AAATAATGTG GGAATCATTT CCACACAGGC TGTTCTTTGG ACGTGAATCA 1500 TCAGTTACTT GGGGTGTAGG AGGAGTTGCT TTCATCAACC CACTTACTAA TCTCAATGAT 1560 CAAACTCACA TGTGTTTGTA CAGAATCACG CTTGAGCAGT TCAACGATGT TCTGTTTCAG 1620 GAAAATGGAT TGAAAGTAGA TTCTGATTCT CCGCTCTTTG GTCTAGATAC TCTGCAGTTA 1680 GTAGAGAAGA AAGGATCCAT TCCACTTGCT TCGGGTGGTT GGTATGGAAA CATTGTCTGC 1740 TTGGGGAAAG AATGCGACAT CCCTATACTT ACAATGACTT GCACACTATC TGCTGTTGAG 1800 AAGTTCAAAT CCGGTGAGAT CCCTTTAAGA CCTCCTTCAG AAGCATATGC AAACACTATG 1860 ATAAGAGGGC TTGTTGAAGG AGGAAGATTA TCTGAAGAAG AAGCTAAAGC TTACATACAC 1920 AATGCTGCAT CTAAACCTCT CTAG
1945Nucleotide Fasta Sequence
>Bo7g098310.1|Class-I|Brassica oleracea ATGGCAATGGCCGGTGAATCTTCTAATAACAACTACAGAGACTGTGACGGGAAGAGTCATCGAAAGGTGGGTCTTGTCTATGACGAGACGATGTGCAAACACGACACACCTAACGGCGAGGATCACCCTGAGTGTCCTGATCGCATCAGAGTTATCTGGGAGAAGCTCCAGCTCGCCGGAGTCTCTCAAAGATGTGTGGTTTTTGGTGGTAGCAAAGCTGAAGACAAGCATCTCCAATTGGTTCACACAAAGGACCATGTTAGTGTAGTTAAGAGTTTAAGCACAAAGAAGAAAGATTACCGGAGAAACAGGATTGCTTCACAGTGGAATTCAATATATCTGAATGGAAGTTCATCTGAAGCCGCGTTTCTTGCAGCTGGATCTGTTGTAGAGTTGGCGGAGAAAGTTGCAGAAGGAGAGTTGGATTGTGGGTATGCTATTGTCAGGCCCCCAGGGCACCATGCTGAGCCAGATGAAGCTATGGGTTTCTGTTTGTTCAACAACGTAGCAGTCGCTGCTAGCTATTTACTTGATGAAAGACCTGAACTAGGTGTCAAGAAGATTCTGATTGTTGATTGGGATGTCCATCATGGAAATGGCACGCAGAAGATGTTCTGGAAAGATCCTCGTGTACTGTTTTTCTCTGTTCACAGGCACGAACACGGAGGCTTCTATCCAGCGGGTGATGATGGAGACTACAACATGGTTGGGGAAGGTCCAGGTGAAGGGTTTAACATAAACGTTCCATGGGAACAAGGAAGATGCGGAGATGCAGATTATCTTGCCGCATGGGACCATATTTTGATTCCTGTGGCGAAGGAGTTTAATCCTGATATTATTTTGTTATCAGCTGGATTTGATGCAGCTATTGGTGATCCACTTGGGGGCTGTCGTGTAACACCATATGGATATTCAGTTATGTTGAAGAAGCTGATGGAGTTTGCAAAAGGAAAGATTGTGTTGGCGTTAGAGGGAGGGTACAATCTTGACTCAATTGCAAAGTCTTCACTGGCATGTGTCCAAGTCTTGCTTGAAGACAAACCAATTCAAGGTTCTTCTGAAGCATACCCATTCGAGTCTACATGGCGTGTCATACAAGCGGTACGAAAGAAGCTGTCTGCATATTGGCCTTCACTTGCAGATGTATTATCATCGAAGCTCATTGATCAGAAAACTCCCACTCCAATTATTGTTTTCTCAAGCTCCGACTCTGAAACTGAAGACTACGCTGATGATATCCTAGATCAAATGTCGAGACTCAACATTGAAAACCACCACGTAGATACAGTTTCTACATCTTGGAGAAGAGATCTCTCAAAAGTTGATGTCTGGTATGCCTCTTTTGGATCCAACATGTGGAAACCAAGGTTCCTTTGCTATATTCAAGGGGGACAAGTAGAGGGAATGAAAAAGGTCTGCGTTGGTTCAATGGATAAAACTCCACCAAAGCAAATAATGTGGGAATCATTTCCACACAGGCTGTTCTTTGGACGTGAATCATCAGTTACTTGGGGTGTAGGAGGAGTTGCTTTCATCAACCCACTTACTAATCTCAATGATCAAACTCACATGTGTTTGTACAGAATCACGCTTGAGCAGTTCAACGATGTTCTGTTTCAGGAAAATGGATTGAAAGTAGATTCTGATTCTCCGCTCTTTGGTCTAGATACTCTGCAGTTAGTAGAGAAGAAAGGATCCATTCCACTTGCTTCGGGTGGTTGGTATGGAAACATTGTCTGCTTGGGGAAAGAATGCGACATCCCTATACTTACAATGACTTGCACACTATCTGCTGTTGAGAAGTTCAAATCCGGTGAGATCCCTTTAAGACCTCCTTCAGAAGCATATGCAAACACTATGATAAGAGGGCTTGTTGAAGGAGGAAGATTATCTGAAGAAGAAGCTAAAGCTTACATACACAATGCTGCATCTAAACCTCTCTAG
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |