Tag |
Content |
WERAM ID |
WERAM-Org-0078 |
Ensembl Protein ID |
ORGLA07G0164500.1 |
Gene Name |
|
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
4.70e-125 |
417.8 |
16 |
338 |
HDAC |
Class-I |
1.20e-39 |
137.4 |
20 |
329 |
|
Organism |
Oryza glaberrima |
Domain Profile |
HDAC Class-II
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletae.klekeelesltvdsdsi 92 +gl+yde+m++h+++ +++ hpE+peR++ai+++l++ g++++++ +ka++a+++ +++vHs++h++l+++ + k +++ ++++ + +si ORGLA07G0164500.1 16 VGLLYDERMCAHATPDGEE--HPENPERLRAIWRKLSADGVASRCMIMKAKEAEDKYIASVHSQNHIKLMRSISsKEYDSRRNKIARKLNSI 105 689************9999..***************************************************998888999999******** PP class-2.txt 93 ylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklk...vkkilivDwDvHhGnGtqei 181 y+++ s+++a la+G+v+e+++kv++gel+ ++a+vRPPGHHae+++amGFClfnnva+aa +l+++ + +kkilivDwDvHhGnGtq++ ORGLA07G0164500.1 106 YFNKGSSESAFLAAGSVIEVAEKVAAGELSSAIALVRPPGHHAEHNEAMGFCLFNNVAIAADYLLNERTdlgIKKILIVDWDVHHGNGTQKM 197 ****************************************************************99877777******************** PP class-2.txt 182 fykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgg 273 fy+dp+vl++S+HR+d gsf+p+ g++++ +geg+g+g+n+Nv+w++g++gda+y+aa+++v+lp+a+ F+Pd+vlvsaGfDaa gdplgg ORGLA07G0164500.1 198 FYSDPRVLFFSVHRFDYGSFYPAEGDASYCFIGEGDGKGYNINVPWEHGKCGDADYIAAWDHVLLPVAEAFNPDIVLVSAGFDAALGDPLGG 289 ******************************************************************************************** PP class-2.txt 274 lsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322 +++t+++ya l +ll++a+gr+v++lEGGynl++ia++v+a++k+Llg ORGLA07G0164500.1 290 CCITPNGYALLLTKLLGFAQGRIVMALEGGYNLRSIANSVSACAKVLLG 338 ***********************************************96 PP
HDAC Class-I
class-1.txt 7 ydedvgeyhy..gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedc.Pvf 95 yde++ + + g++hp p+rl+ + + + g+ + i+k+k+a+ ++++++hs+++i++++++++++ ++ +++++ + ++ ORGLA07G0164500.1 20 YDERMCAHATpdGEEHPENPERLRAIWRKLSADGVASRCMIMKAKEAEDKYIASVHSQNHIKLMRSISSKEYDSRRNKIAR---KLNSiYFN 108 555555444344899***********9999999***********************************9998877655443...23330345 PP class-1.txt 96 dglfeycqlitGasleaakkLnkkeadiainwa.GGlhhakkseasGfcyvnDivlailellkk.....hkrvlyididlhhGDgveeafyt 181 +g e + l +G+ +e a+k+ +e ai hha ++ea Gfc n++ +a ll + k++l +d d+hhG+g ++ fy ORGLA07G0164500.1 109 KGSSESAFLAAGSVIEVAEKVAAGELSSAIALVrPPGHHAEHNEAMGFCLFNNVAIAADYLLNErtdlgIKKILIVDWDVHHGNGTQKMFYS 200 6788889999*************99888887641456********************99998742233369********************* PP class-1.txt 182 tdrvmtvsfhkyge.effPgtGdlsd..vgaekgkyyavnvPlkdg.idDesyekifksviskvieafePeavvlqcGaDslagDrlgefnl 269 rv+ s+h+++ +f+P+ Gd s +g+++gk y +nvP ++g + D y + +v+ +v eaf+P++v++ G D+ gD+lg + ORGLA07G0164500.1 201 DPRVLFFSVHRFDYgSFYPAEGDASYcfIGEGDGKGYNINVPWEHGkCGDADYIAAWDHVLLPVAEAFNPDIVLVSAGFDAALGDPLGGCCI 292 ***********98525*******986447999*************9899******************************************* PP class-1.txt 270 sikghaecvkfvksf.nlpllvlGGGGYtlrnvaRcw 305 + +g+a + + f + +++ GGY+lr +a ORGLA07G0164500.1 293 TPNGYALLLTKLLGFaQGRIVMALEGGYNLRSIANSV 329 *******999999996778888889******999765 PP
|
Protein Sequence (Fasta) | MAAATTAAPA AAAARVGLLY DERMCAHATP DGEEHPENPE RLRAIWRKLS ADGVASRCMI 60 MKAKEAEDKY IASVHSQNHI KLMRSISSKE YDSRRNKIAR KLNSIYFNKG SSESAFLAAG 120 SVIEVAEKVA AGELSSAIAL VRPPGHHAEH NEAMGFCLFN NVAIAADYLL NERTDLGIKK 180 ILIVDWDVHH GNGTQKMFYS DPRVLFFSVH RFDYGSFYPA EGDASYCFIG EGDGKGYNIN 240 VPWEHGKCGD ADYIAAWDHV LLPVAEAFNP DIVLVSAGFD AALGDPLGGC CITPNGYALL 300 LTKLLGFAQG RIVMALEGGY NLRSIANSVS ACAKVLLGDK FRFDTPDMQP FESSWRVIQA 360 VRDELKTFWP VLSNRLPENI SLRSRPSQIE LYSSGSDSEV EDLPDAIASV NIIQITDGII 420 SESFSKLNLD EDKIATKTTS SNVMVEGPTD SVEPQNDGSA AVSTEGISSL SSTWRSDLSK 480 VYVWYASFGS NMWTPRFLCY IQGGKAEGMN IPCFGSHDTS PPRGSMWKTV PHRLFFGRSS 540 TPCWGTGGVA FLNPEINHTE NSYVCMYKIT LEQFNDVLFQ ENRLVKENGE SGKTESPDSP 600 LIGLSEIEFV SRNKGVHLAP IKDSWYSNVL YLGEEDNLPI LTMTCPSSDV ERCRSGELPL 660 CPPSKTYSAT LIRGLMEGKH LDADAAASYI NTAATRGL 698Protein Fasta Sequence
>ORGLA07G0164500.1|Class-I|Oryza glaberrima MAAATTAAPAAAAARVGLLYDERMCAHATPDGEEHPENPERLRAIWRKLSADGVASRCMIMKAKEAEDKYIASVHSQNHIKLMRSISSKEYDSRRNKIARKLNSIYFNKGSSESAFLAAGSVIEVAEKVAAGELSSAIALVRPPGHHAEHNEAMGFCLFNNVAIAADYLLNERTDLGIKKILIVDWDVHHGNGTQKMFYSDPRVLFFSVHRFDYGSFYPAEGDASYCFIGEGDGKGYNINVPWEHGKCGDADYIAAWDHVLLPVAEAFNPDIVLVSAGFDAALGDPLGGCCITPNGYALLLTKLLGFAQGRIVMALEGGYNLRSIANSVSACAKVLLGDKFRFDTPDMQPFESSWRVIQAVRDELKTFWPVLSNRLPENISLRSRPSQIELYSSGSDSEVEDLPDAIASVNIIQITDGIISESFSKLNLDEDKIATKTTSSNVMVEGPTDSVEPQNDGSAAVSTEGISSLSSTWRSDLSKVYVWYASFGSNMWTPRFLCYIQGGKAEGMNIPCFGSHDTSPPRGSMWKTVPHRLFFGRSSTPCWGTGGVAFLNPEINHTENSYVCMYKITLEQFNDVLFQENRLVKENGESGKTESPDSPLIGLSEIEFVSRNKGVHLAPIKDSWYSNVLYLGEEDNLPILTMTCPSSDVERCRSGELPLCPPSKTYSATLIRGLMEGKHLDADAAASYINTAATRGL
|
Nucleotide Sequence (Fasta) | ATGGCGGCGG CGACGACCGC CGCGCCGGCG GCGGCGGCGG CGAGGGTGGG GCTGCTGTAC 60 GACGAGAGGA TGTGCGCGCA CGCGACGCCC GACGGGGAGG AGCACCCGGA GAACCCCGAG 120 AGGCTGCGGG CCATCTGGCG CAAGCTCTCC GCCGACGGCG TCGCCTCCAG GTGCATGATC 180 ATGAAAGCGA AGGAAGCTGA GGACAAGTAT ATAGCTTCTG TCCATAGCCA GAACCATATC 240 AAGCTGATGA GGAGTATCAG CTCAAAAGAA TATGATTCCC GTCGAAACAA GATTGCTAGA 300 AAATTGAATT CCATTTACTT CAACAAGGGC TCCTCAGAGT CTGCTTTTCT TGCAGCTGGT 360 TCTGTGATTG AGGTAGCTGA GAAGGTTGCT GCAGGAGAGT TAAGTTCTGC TATTGCTCTA 420 GTCCGACCTC CAGGTCACCA TGCTGAACAT AATGAGGCAA TGGGTTTTTG CCTCTTCAAC 480 AATGTAGCAA TTGCTGCTGA TTATCTCTTA AATGAGAGGA CTGACTTAGG TATCAAGAAG 540 ATATTGATTG TCGATTGGGA TGTTCATCAT GGAAATGGCA CACAAAAGAT GTTTTATAGT 600 GATCCTCGTG TATTGTTCTT TTCAGTTCAC AGATTTGATT ATGGCAGCTT CTATCCTGCT 660 GAAGGGGATG CATCTTACTG TTTCATTGGG GAAGGAGATG GTAAAGGGTA CAACATTAAC 720 GTGCCCTGGG AACATGGAAA ATGTGGTGAT GCAGATTATA TTGCTGCATG GGACCATGTA 780 CTACTTCCTG TTGCTGAAGC ATTTAACCCT GATATAGTCT TGGTGTCTGC TGGGTTTGAT 840 GCAGCACTGG GTGATCCTCT TGGTGGCTGC TGCATCACTC CCAATGGATA TGCTCTGCTA 900 CTGACAAAGC TCTTAGGTTT TGCCCAAGGG AGGATAGTGA TGGCTCTTGA AGGAGGCTAT 960 AACCTTAGAT CCATAGCAAA TTCAGTTAGT GCTTGTGCTA AAGTTTTGTT GGGAGACAAG 1020 TTCAGATTTG ACACTCCTGA TATGCAACCG TTTGAATCTT CATGGAGAGT TATACAAGCG 1080 GTACGTGATG AATTGAAGAC GTTCTGGCCT GTTCTGAGTA ATAGATTGCC AGAGAATATA 1140 TCATTGAGGA GTAGGCCCTC ACAAATTGAG CTGTATTCTT CTGGTTCTGA CTCTGAAGTT 1200 GAAGATCTCC CTGATGCTAT TGCTTCTGTC AATATTATTC AAATTACTGA TGGTATTATA 1260 AGTGAAAGCT TCTCAAAGTT GAACCTTGAT GAAGACAAAA TCGCAACAAA GACCACCTCA 1320 AGTAATGTAA TGGTTGAAGG TCCAACTGAT TCAGTTGAAC CACAAAATGA TGGATCTGCT 1380 GCGGTGTCAA CTGAAGGAAT ATCATCTCTA TCTTCTACTT GGAGATCAGA TCTGTCAAAA 1440 GTATATGTTT GGTATGCCAG CTTTGGTTCA AACATGTGGA CACCAAGGTT TCTGTGCTAC 1500 ATCCAAGGGG GAAAGGCTGA GGGTATGAAT ATACCATGTT TTGGATCTCA TGACACAAGC 1560 CCACCAAGAG GTTCCATGTG GAAGACTGTG CCTCATAGAT TGTTTTTTGG TAGATCCTCT 1620 ACTCCTTGCT GGGGAACTGG TGGTGTTGCT TTTCTCAACC CTGAGATAAA CCACACTGAG 1680 AATTCCTATG TCTGCATGTA TAAAATAACG CTCGAGCAGT TCAATGATGT ATTGTTTCAA 1740 GAGAATCGTT TAGTGAAGGA GAACGGCGAA AGTGGAAAAA CTGAGTCTCC TGACTCTCCT 1800 TTGATTGGCT TGTCTGAAAT AGAGTTTGTT TCCAGAAACA AGGGTGTCCA CCTTGCACCT 1860 ATTAAGGATA GCTGGTACTC CAATGTACTT TACCTTGGGG AGGAGGATAA CCTTCCAATT 1920 CTTACAATGA CATGCCCGTC ATCAGACGTA GAGCGATGCA GATCCGGAGA GCTGCCATTG 1980 TGTCCTCCAT CCAAGACCTA CTCCGCCACC CTGATAAGGG GGCTAATGGA AGGGAAGCAC 2040 CTGGATGCAG ATGCGGCCGC TAGTTACATC AACACTGCAG CTACCAGAGG CCTGTGA
2098Nucleotide Fasta Sequence
>ORGLA07G0164500.1|Class-I|Oryza glaberrima ATGGCGGCGGCGACGACCGCCGCGCCGGCGGCGGCGGCGGCGAGGGTGGGGCTGCTGTACGACGAGAGGATGTGCGCGCACGCGACGCCCGACGGGGAGGAGCACCCGGAGAACCCCGAGAGGCTGCGGGCCATCTGGCGCAAGCTCTCCGCCGACGGCGTCGCCTCCAGGTGCATGATCATGAAAGCGAAGGAAGCTGAGGACAAGTATATAGCTTCTGTCCATAGCCAGAACCATATCAAGCTGATGAGGAGTATCAGCTCAAAAGAATATGATTCCCGTCGAAACAAGATTGCTAGAAAATTGAATTCCATTTACTTCAACAAGGGCTCCTCAGAGTCTGCTTTTCTTGCAGCTGGTTCTGTGATTGAGGTAGCTGAGAAGGTTGCTGCAGGAGAGTTAAGTTCTGCTATTGCTCTAGTCCGACCTCCAGGTCACCATGCTGAACATAATGAGGCAATGGGTTTTTGCCTCTTCAACAATGTAGCAATTGCTGCTGATTATCTCTTAAATGAGAGGACTGACTTAGGTATCAAGAAGATATTGATTGTCGATTGGGATGTTCATCATGGAAATGGCACACAAAAGATGTTTTATAGTGATCCTCGTGTATTGTTCTTTTCAGTTCACAGATTTGATTATGGCAGCTTCTATCCTGCTGAAGGGGATGCATCTTACTGTTTCATTGGGGAAGGAGATGGTAAAGGGTACAACATTAACGTGCCCTGGGAACATGGAAAATGTGGTGATGCAGATTATATTGCTGCATGGGACCATGTACTACTTCCTGTTGCTGAAGCATTTAACCCTGATATAGTCTTGGTGTCTGCTGGGTTTGATGCAGCACTGGGTGATCCTCTTGGTGGCTGCTGCATCACTCCCAATGGATATGCTCTGCTACTGACAAAGCTCTTAGGTTTTGCCCAAGGGAGGATAGTGATGGCTCTTGAAGGAGGCTATAACCTTAGATCCATAGCAAATTCAGTTAGTGCTTGTGCTAAAGTTTTGTTGGGAGACAAGTTCAGATTTGACACTCCTGATATGCAACCGTTTGAATCTTCATGGAGAGTTATACAAGCGGTACGTGATGAATTGAAGACGTTCTGGCCTGTTCTGAGTAATAGATTGCCAGAGAATATATCATTGAGGAGTAGGCCCTCACAAATTGAGCTGTATTCTTCTGGTTCTGACTCTGAAGTTGAAGATCTCCCTGATGCTATTGCTTCTGTCAATATTATTCAAATTACTGATGGTATTATAAGTGAAAGCTTCTCAAAGTTGAACCTTGATGAAGACAAAATCGCAACAAAGACCACCTCAAGTAATGTAATGGTTGAAGGTCCAACTGATTCAGTTGAACCACAAAATGATGGATCTGCTGCGGTGTCAACTGAAGGAATATCATCTCTATCTTCTACTTGGAGATCAGATCTGTCAAAAGTATATGTTTGGTATGCCAGCTTTGGTTCAAACATGTGGACACCAAGGTTTCTGTGCTACATCCAAGGGGGAAAGGCTGAGGGTATGAATATACCATGTTTTGGATCTCATGACACAAGCCCACCAAGAGGTTCCATGTGGAAGACTGTGCCTCATAGATTGTTTTTTGGTAGATCCTCTACTCCTTGCTGGGGAACTGGTGGTGTTGCTTTTCTCAACCCTGAGATAAACCACACTGAGAATTCCTATGTCTGCATGTATAAAATAACGCTCGAGCAGTTCAATGATGTATTGTTTCAAGAGAATCGTTTAGTGAAGGAGAACGGCGAAAGTGGAAAAACTGAGTCTCCTGACTCTCCTTTGATTGGCTTGTCTGAAATAGAGTTTGTTTCCAGAAACAAGGGTGTCCACCTTGCACCTATTAAGGATAGCTGGTACTCCAATGTACTTTACCTTGGGGAGGAGGATAACCTTCCAATTCTTACAATGACATGCCCGTCATCAGACGTAGAGCGATGCAGATCCGGAGAGCTGCCATTGTGTCCTCCATCCAAGACCTACTCCGCCACCCTGATAAGGGGGCTAATGGAAGGGAAGCACCTGGATGCAGATGCGGCCGCTAGTTACATCAACACTGCAGCTACCAGAGGCCTGTGA
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Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |