Tag |
Content |
WERAM ID |
WERAM-Sei-0109 |
Ensembl Protein ID |
Si029091m |
Gene Name |
SETIT_029091mg |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
3.60e-125 |
418.4 |
18 |
340 |
HDAC |
Class-I |
5.40e-40 |
138.9 |
22 |
331 |
|
Organism |
Setaria italica |
Domain Profile |
HDAC Class-II
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletae.klekeelesltvdsdsiylesks 98 +gl+yde+m++h+++ +++ hpE+peR++ai+++l+++g++++++ lka++a+++ +++vHs++h++l+++ + k+ +++ ++++ +++siy+++ s Si029091m 18 VGLLYDERMCAHATPDGEE--HPENPERLRAIWRKLSAEGVASRCVVLKAKEAEDKYIASVHSQNHIKLMKEISsKKYDSSRNKIARKYNSIYFNKGS 113 689************9999..***************************************************998999999999************** PP class-2.txt 99 ikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklk...vkkilivDwDvHhGnGtqeifykdpkvlylSl 193 +++a la+G+v+e+++kv++gel+ ++a+vRPPGHHae+++amGFClfnnvavaa++l+++ + +kkilivDwDvHhGnGtq++fy+dp+vl++S+ Si029091m 114 SESAVLAAGSVIEVAEKVAAGELSSAIALVRPPGHHAEHDEAMGFCLFNNVAVAANYLLNERPdlgIKKILIVDWDVHHGNGTQKMFYNDPRVLFFSV 211 ***********************************************************9987788******************************** PP class-2.txt 194 HRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgglsvtakcyatltkqllkl 291 HR+d gsf+p+ g+++ +ge++g+g+n+Nv+w++g++gda+y+aa+++v+lp+++ F+Pd++lvsaGfDaa gdplgg+++t+++ya l +ll++ Si029091m 212 HRFDYGSFYPAEGDASHCFIGEEAGKGYNINVPWEHGKCGDADYIAAWDHVLLPVTEAFDPDIILVSAGFDAALGDPLGGCCITPNGYALLLTKLLGF 309 **********99999999******************************************************************************** PP class-2.txt 292 aggrvvlvlEGGynlkaiaeaveavvkaLlg 322 a+gr+v++lEGGynl++ia++v+a++k+Llg Si029091m 310 AKGRIVMALEGGYNLRSIANSVSACAKVLLG 340 *****************************96 PP
HDAC Class-I
class-1.txt 7 ydedvgeyhy..gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeels.kelkkfnvgedcPvfdglfey 101 yde++ + + g++hp p+rl+ + + + g+ + ++k+k+a+ ++++++hs+++i+++k++++++ ++ k +k+n +g e Si029091m 22 YDERMCAHATpdGEEHPENPERLRAIWRKLSAEGVASRCVVLKAKEAEDKYIASVHSQNHIKLMKEISSKKYDSSRnKIARKYNS---IYFNKGSSES 116 555555444344899*****************************************************99988766144566763...3345678899 PP class-1.txt 102 cqlitGasleaakkLnkkeadiainwa.GGlhhakkseasGfcyvnDivlailellkk.....hkrvlyididlhhGDgveeafyttdrvmtvsfhky 193 + l +G+ +e a+k+ +e ai hha ++ea Gfc n++ +a ll + k++l +d d+hhG+g ++ fy+ rv+ s+h++ Si029091m 117 AVLAAGSVIEVAEKVAAGELSSAIALVrPPGHHAEHDEAMGFCLFNNVAVAANYLLNErpdlgIKKILIVDWDVHHGNGTQKMFYNDPRVLFFSVHRF 214 99999************99888887641456*********************9999852333368********************************9 PP class-1.txt 194 ge.effPgtGdlsd..vgaekgkyyavnvPlkdg.idDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksf.nl 286 + +f+P+ Gd s +g+e gk y +nvP ++g + D y + +v+ +v+eaf+P+++++ G D+ gD+lg ++ +g+a + + f + Si029091m 215 DYgSFYPAEGDASHcfIGEEAGKGYNINVPWEHGkCGDADYIAAWDHVLLPVTEAFDPDIILVSAGFDAALGDPLGGCCITPNGYALLLTKLLGFaKG 312 8525********98557999*************9899**************************************************99999999666 PP class-1.txt 287 pllvlGGGGYtlrnvaRcw 305 +++ GGY+lr +a Si029091m 313 RIVMALEGGYNLRSIANSV 331 7888889******999765 PP
|
Protein Sequence (Fasta) | MAAAPAPPAV AASRAARVGL LYDERMCAHA TPDGEEHPEN PERLRAIWRK LSAEGVASRC 60 VVLKAKEAED KYIASVHSQN HIKLMKEISS KKYDSSRNKI ARKYNSIYFN KGSSESAVLA 120 AGSVIEVAEK VAAGELSSAI ALVRPPGHHA EHDEAMGFCL FNNVAVAANY LLNERPDLGI 180 KKILIVDWDV HHGNGTQKMF YNDPRVLFFS VHRFDYGSFY PAEGDASHCF IGEEAGKGYN 240 INVPWEHGKC GDADYIAAWD HVLLPVTEAF DPDIILVSAG FDAALGDPLG GCCITPNGYA 300 LLLTKLLGFA KGRIVMALEG GYNLRSIANS VSACAKVLLG DKFTFSSPEM QPFESTWRVI 360 QAVRNELKTC WPVLSSKLPE NLSLRIKPSP SELYASSDSE PDSEDVDELS GAVSSVNVIQ 420 FADDAISEHL SKMKLDEDNL AVKTASSCST AEHHPTDSVQ VDKGVSVVLS KRISDLSLAW 480 RSDLSRIYVW YASFGSNMWK PRFLCYIQGG KVEGMSIPCC GSRDTSSPKG IMWKIVPHRL 540 LFGRSSTPCW GTGGVAFLNP EINYNEKSYV CMYKITLEQF NDILFQENRL VLEDGTDGNV 600 VYPDSPLIGS SEVEFMSTNK AIHLEPIKDS WYSNVLYLGD EDELPILTMT CPSSDIERYK 660 SGELPLAPPS KTYAATLIKG LVEGEQLDAD GAASYINAAA ARGL 704Protein Fasta Sequence
>Si029091m|Class-I|Setaria italica MAAAPAPPAVAASRAARVGLLYDERMCAHATPDGEEHPENPERLRAIWRKLSAEGVASRCVVLKAKEAEDKYIASVHSQNHIKLMKEISSKKYDSSRNKIARKYNSIYFNKGSSESAVLAAGSVIEVAEKVAAGELSSAIALVRPPGHHAEHDEAMGFCLFNNVAVAANYLLNERPDLGIKKILIVDWDVHHGNGTQKMFYNDPRVLFFSVHRFDYGSFYPAEGDASHCFIGEEAGKGYNINVPWEHGKCGDADYIAAWDHVLLPVTEAFDPDIILVSAGFDAALGDPLGGCCITPNGYALLLTKLLGFAKGRIVMALEGGYNLRSIANSVSACAKVLLGDKFTFSSPEMQPFESTWRVIQAVRNELKTCWPVLSSKLPENLSLRIKPSPSELYASSDSEPDSEDVDELSGAVSSVNVIQFADDAISEHLSKMKLDEDNLAVKTASSCSTAEHHPTDSVQVDKGVSVVLSKRISDLSLAWRSDLSRIYVWYASFGSNMWKPRFLCYIQGGKVEGMSIPCCGSRDTSSPKGIMWKIVPHRLLFGRSSTPCWGTGGVAFLNPEINYNEKSYVCMYKITLEQFNDILFQENRLVLEDGTDGNVVYPDSPLIGSSEVEFMSTNKAIHLEPIKDSWYSNVLYLGDEDELPILTMTCPSSDIERYKSGELPLAPPSKTYAATLIKGLVEGEQLDADGAASYINAAAARGL
|
Nucleotide Sequence (Fasta) | ATGGCGGCGG CTCCGGCTCC CCCAGCGGTC GCGGCGTCCA GAGCGGCGCG GGTGGGGCTG 60 CTGTACGACG AGCGGATGTG CGCGCACGCG ACGCCCGACG GGGAGGAGCA CCCGGAGAAC 120 CCCGAGCGGC TGCGCGCCAT CTGGCGGAAG CTCAGCGCCG AGGGCGTCGC GTCCAGGTGT 180 GTGGTCCTTA AGGCGAAGGA AGCTGAGGAC AAGTATATAG CTTCTGTTCA CAGCCAGAAC 240 CATATAAAGC TGATGAAGGA AATTAGCTCG AAGAAATATG ATTCCAGCAG AAACAAGATT 300 GCCAGGAAAT ACAATTCCAT TTACTTCAAC AAGGGTTCCT CAGAGTCTGC TGTTCTTGCA 360 GCTGGTTCTG TCATAGAGGT TGCTGAGAAA GTTGCTGCTG GTGAGTTAAG TTCTGCTATT 420 GCCCTAGTCA GACCTCCAGG CCACCATGCA GAACATGATG AGGCAATGGG ATTTTGCCTC 480 TTCAACAATG TGGCAGTTGC AGCTAATTAT CTCTTAAATG AGAGGCCTGA TTTGGGTATC 540 AAGAAGATAC TGATTGTCGA TTGGGATGTT CACCATGGAA ATGGAACACA GAAAATGTTT 600 TACAATGATC CTCGTGTATT GTTCTTTTCA GTTCACAGAT TTGATTATGG AAGCTTCTAT 660 CCTGCTGAAG GGGATGCTTC TCACTGTTTC ATCGGAGAAG AAGCTGGTAA AGGGTATAAC 720 ATTAATGTTC CCTGGGAGCA TGGGAAGTGT GGTGATGCTG ATTATATTGC TGCATGGGAC 780 CATGTATTGC TTCCTGTCAC TGAAGCTTTT GATCCTGATA TAATATTGGT ATCGGCTGGG 840 TTCGATGCAG CACTGGGTGA TCCTCTCGGT GGTTGCTGCA TCACACCAAA TGGATATGCC 900 CTGCTACTAA CAAAGCTATT AGGATTTGCT AAAGGAAGGA TAGTGATGGC CCTTGAAGGA 960 GGTTATAACC TTAGGTCCAT AGCAAATTCA GTTTCTGCTT GTGCAAAAGT TCTCTTGGGA 1020 GACAAATTCA CGTTCAGCTC TCCAGAGATG CAGCCATTTG AATCTACATG GAGAGTTATA 1080 CAAGCGGTAC GCAATGAATT GAAAACATGC TGGCCTGTTT TGAGTAGCAA GCTGCCAGAG 1140 AATTTATCAT TGAGGATTAA GCCTTCACCA AGTGAGCTCT ACGCTTCCTC TGATTCTGAG 1200 CCTGACAGTG AAGATGTTGA TGAGCTCTCT GGTGCTGTTT CATCAGTCAA TGTTATTCAA 1260 TTTGCTGATG ATGCTATAAG TGAACACCTC TCAAAAATGA AACTTGATGA AGACAACCTT 1320 GCAGTGAAGA CTGCCTCAAG TTGCTCAACA GCAGAACATC ATCCAACTGA TTCAGTACAA 1380 GTAGATAAAG GTGTATCTGT GGTACTGTCC AAAAGAATAT CTGATTTATC TCTTGCTTGG 1440 CGATCAGATT TATCAAGAAT TTATGTCTGG TATGCCAGCT TTGGTTCAAA CATGTGGAAG 1500 CCAAGGTTTC TATGCTATAT TCAAGGGGGG AAGGTTGAGG GTATGAGTAT ACCATGTTGC 1560 GGATCACGTG ACACGAGCTC ACCAAAAGGA ATCATGTGGA AGATTGTGCC TCATAGGTTG 1620 CTTTTCGGTA GATCCTCTAC CCCTTGTTGG GGTACTGGTG GTGTTGCTTT CCTCAACCCT 1680 GAGATAAACT ACAATGAGAA GTCTTATGTC TGCATGTACA AAATAACGCT GGAGCAGTTC 1740 AATGATATCT TGTTTCAAGA GAATCGTCTA GTGCTGGAGG ATGGGACAGA TGGAAATGTT 1800 GTGTATCCTG ACTCTCCTTT GATTGGTTCA TCTGAAGTGG AGTTTATGTC TACAAATAAA 1860 GCTATTCATC TTGAACCTAT CAAGGATAGC TGGTACTCCA ATGTACTTTA TCTTGGGGAC 1920 GAGGATGAAC TTCCAATTCT TACTATGACG TGCCCCTCAT CAGATATTGA GCGGTACAAA 1980 TCTGGTGAGC TACCTCTAGC ACCTCCGTCA AAGACCTACG CCGCCACTCT GATAAAGGGA 2040 CTAGTGGAAG GGGAGCAACT GGATGCTGAC GGAGCTGCCA GCTACATCAA TGCTGCTGCT 2100 GCAAGAGGGT TGTGATTTGT GAAGGCTGCT TCAACGTGTG CTTGTACAGC CGGTAGGGAG 2160 TAGTAAGGAT AATATATTTT GCTAGCGTGT GATGACATCG ATTTAGGACC AGGAGTGATG 2220 TCCAGGCTTC ATTCTCCGCG AATGGAGATT CTGAATCCCC TTTTTTTTTT TAATACGCAG 2280 GAGAGCTGCG TATCTCTGTA TTAAGAAGAA ATTGTTCGTT ACGACACGGG CTAAACCGGG 2340 CACGTGCACA CGGACACATT ACACCTAAGG TGTTTACAAC CTGAAGAGAA AAAACACGC
2400 Nucleotide Fasta Sequence
>Si029091m|Class-I|Setaria italica ATGGCGGCGGCTCCGGCTCCCCCAGCGGTCGCGGCGTCCAGAGCGGCGCGGGTGGGGCTGCTGTACGACGAGCGGATGTGCGCGCACGCGACGCCCGACGGGGAGGAGCACCCGGAGAACCCCGAGCGGCTGCGCGCCATCTGGCGGAAGCTCAGCGCCGAGGGCGTCGCGTCCAGGTGTGTGGTCCTTAAGGCGAAGGAAGCTGAGGACAAGTATATAGCTTCTGTTCACAGCCAGAACCATATAAAGCTGATGAAGGAAATTAGCTCGAAGAAATATGATTCCAGCAGAAACAAGATTGCCAGGAAATACAATTCCATTTACTTCAACAAGGGTTCCTCAGAGTCTGCTGTTCTTGCAGCTGGTTCTGTCATAGAGGTTGCTGAGAAAGTTGCTGCTGGTGAGTTAAGTTCTGCTATTGCCCTAGTCAGACCTCCAGGCCACCATGCAGAACATGATGAGGCAATGGGATTTTGCCTCTTCAACAATGTGGCAGTTGCAGCTAATTATCTCTTAAATGAGAGGCCTGATTTGGGTATCAAGAAGATACTGATTGTCGATTGGGATGTTCACCATGGAAATGGAACACAGAAAATGTTTTACAATGATCCTCGTGTATTGTTCTTTTCAGTTCACAGATTTGATTATGGAAGCTTCTATCCTGCTGAAGGGGATGCTTCTCACTGTTTCATCGGAGAAGAAGCTGGTAAAGGGTATAACATTAATGTTCCCTGGGAGCATGGGAAGTGTGGTGATGCTGATTATATTGCTGCATGGGACCATGTATTGCTTCCTGTCACTGAAGCTTTTGATCCTGATATAATATTGGTATCGGCTGGGTTCGATGCAGCACTGGGTGATCCTCTCGGTGGTTGCTGCATCACACCAAATGGATATGCCCTGCTACTAACAAAGCTATTAGGATTTGCTAAAGGAAGGATAGTGATGGCCCTTGAAGGAGGTTATAACCTTAGGTCCATAGCAAATTCAGTTTCTGCTTGTGCAAAAGTTCTCTTGGGAGACAAATTCACGTTCAGCTCTCCAGAGATGCAGCCATTTGAATCTACATGGAGAGTTATACAAGCGGTACGCAATGAATTGAAAACATGCTGGCCTGTTTTGAGTAGCAAGCTGCCAGAGAATTTATCATTGAGGATTAAGCCTTCACCAAGTGAGCTCTACGCTTCCTCTGATTCTGAGCCTGACAGTGAAGATGTTGATGAGCTCTCTGGTGCTGTTTCATCAGTCAATGTTATTCAATTTGCTGATGATGCTATAAGTGAACACCTCTCAAAAATGAAACTTGATGAAGACAACCTTGCAGTGAAGACTGCCTCAAGTTGCTCAACAGCAGAACATCATCCAACTGATTCAGTACAAGTAGATAAAGGTGTATCTGTGGTACTGTCCAAAAGAATATCTGATTTATCTCTTGCTTGGCGATCAGATTTATCAAGAATTTATGTCTGGTATGCCAGCTTTGGTTCAAACATGTGGAAGCCAAGGTTTCTATGCTATATTCAAGGGGGGAAGGTTGAGGGTATGAGTATACCATGTTGCGGATCACGTGACACGAGCTCACCAAAAGGAATCATGTGGAAGATTGTGCCTCATAGGTTGCTTTTCGGTAGATCCTCTACCCCTTGTTGGGGTACTGGTGGTGTTGCTTTCCTCAACCCTGAGATAAACTACAATGAGAAGTCTTATGTCTGCATGTACAAAATAACGCTGGAGCAGTTCAATGATATCTTGTTTCAAGAGAATCGTCTAGTGCTGGAGGATGGGACAGATGGAAATGTTGTGTATCCTGACTCTCCTTTGATTGGTTCATCTGAAGTGGAGTTTATGTCTACAAATAAAGCTATTCATCTTGAACCTATCAAGGATAGCTGGTACTCCAATGTACTTTATCTTGGGGACGAGGATGAACTTCCAATTCTTACTATGACGTGCCCCTCATCAGATATTGAGCGGTACAAATCTGGTGAGCTACCTCTAGCACCTCCGTCAAAGACCTACGCCGCCACTCTGATAAAGGGACTAGTGGAAGGGGAGCAACTGGATGCTGACGGAGCTGCCAGCTACATCAATGCTGCTGCTGCAAGAGGGTTGTGATTTGTGAAGGCTGCTTCAACGTGTGCTTGTACAGCCGGTAGGGAGTAGTAAGGATAATATATTTTGCTAGCGTGTGATGACATCGATTTAGGACCAGGAGTGATGTCCAGGCTTCATTCTCCGCGAATGGAGATTCTGAATCCCCTTTTTTTTTTTAATACGCAGGAGAGCTGCGTATCTCTGTATTAAGAAGAAATTGTTCGTTACGACACGGGCTAAACCGGGCACGTGCACACGGACACATTACACCTAAGGTGTTTACAACCTGAAGAGAAAAAACACGC
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |