WERAM Information


Tag Content
WERAM ID WERAM-Sei-0109
Ensembl Protein ID Si029091m
Gene Name SETIT_029091mg
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Si029091m.g Si029091m Si029091m
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 3.60e-125 418.4 18 340
HDAC Class-I 5.40e-40 138.9 22 331
Organism Setaria italica
Domain Profile
  HDAC Class-II

  class-2.txt   2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletae.klekeelesltvdsdsiylesks 98 
+gl+yde+m++h+++ +++ hpE+peR++ai+++l+++g++++++ lka++a+++ +++vHs++h++l+++ + k+ +++ ++++ +++siy+++ s
Si029091m 18 VGLLYDERMCAHATPDGEE--HPENPERLRAIWRKLSAEGVASRCVVLKAKEAEDKYIASVHSQNHIKLMKEISsKKYDSSRNKIARKYNSIYFNKGS 113
689************9999..***************************************************998999999999************** PP
class-2.txt 99 ikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklk...vkkilivDwDvHhGnGtqeifykdpkvlylSl 193
+++a la+G+v+e+++kv++gel+ ++a+vRPPGHHae+++amGFClfnnvavaa++l+++ + +kkilivDwDvHhGnGtq++fy+dp+vl++S+
Si029091m 114 SESAVLAAGSVIEVAEKVAAGELSSAIALVRPPGHHAEHDEAMGFCLFNNVAVAANYLLNERPdlgIKKILIVDWDVHHGNGTQKMFYNDPRVLFFSV 211
***********************************************************9987788******************************** PP
class-2.txt 194 HRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgglsvtakcyatltkqllkl 291
HR+d gsf+p+ g+++ +ge++g+g+n+Nv+w++g++gda+y+aa+++v+lp+++ F+Pd++lvsaGfDaa gdplgg+++t+++ya l +ll++
Si029091m 212 HRFDYGSFYPAEGDASHCFIGEEAGKGYNINVPWEHGKCGDADYIAAWDHVLLPVTEAFDPDIILVSAGFDAALGDPLGGCCITPNGYALLLTKLLGF 309
**********99999999******************************************************************************** PP
class-2.txt 292 aggrvvlvlEGGynlkaiaeaveavvkaLlg 322
a+gr+v++lEGGynl++ia++v+a++k+Llg
Si029091m 310 AKGRIVMALEGGYNLRSIANSVSACAKVLLG 340
*****************************96 PP

  HDAC Class-I

  class-1.txt   7 ydedvgeyhy..gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeels.kelkkfnvgedcPvfdglfey 101
yde++ + + g++hp p+rl+ + + + g+ + ++k+k+a+ ++++++hs+++i+++k++++++ ++ k +k+n +g e
Si029091m 22 YDERMCAHATpdGEEHPENPERLRAIWRKLSAEGVASRCVVLKAKEAEDKYIASVHSQNHIKLMKEISSKKYDSSRnKIARKYNS---IYFNKGSSES 116
555555444344899*****************************************************99988766144566763...3345678899 PP
class-1.txt 102 cqlitGasleaakkLnkkeadiainwa.GGlhhakkseasGfcyvnDivlailellkk.....hkrvlyididlhhGDgveeafyttdrvmtvsfhky 193
+ l +G+ +e a+k+ +e ai hha ++ea Gfc n++ +a ll + k++l +d d+hhG+g ++ fy+ rv+ s+h++
Si029091m 117 AVLAAGSVIEVAEKVAAGELSSAIALVrPPGHHAEHDEAMGFCLFNNVAVAANYLLNErpdlgIKKILIVDWDVHHGNGTQKMFYNDPRVLFFSVHRF 214
99999************99888887641456*********************9999852333368********************************9 PP
class-1.txt 194 ge.effPgtGdlsd..vgaekgkyyavnvPlkdg.idDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksf.nl 286
+ +f+P+ Gd s +g+e gk y +nvP ++g + D y + +v+ +v+eaf+P+++++ G D+ gD+lg ++ +g+a + + f +
Si029091m 215 DYgSFYPAEGDASHcfIGEEAGKGYNINVPWEHGkCGDADYIAAWDHVLLPVTEAFDPDIILVSAGFDAALGDPLGGCCITPNGYALLLTKLLGFaKG 312
8525********98557999*************9899**************************************************99999999666 PP
class-1.txt 287 pllvlGGGGYtlrnvaRcw 305
+++ GGY+lr +a
Si029091m 313 RIVMALEGGYNLRSIANSV 331
7888889******999765 PP

Protein Sequence
(Fasta)
MAAAPAPPAV AASRAARVGL LYDERMCAHA TPDGEEHPEN PERLRAIWRK LSAEGVASRC 60
VVLKAKEAED KYIASVHSQN HIKLMKEISS KKYDSSRNKI ARKYNSIYFN KGSSESAVLA 120
AGSVIEVAEK VAAGELSSAI ALVRPPGHHA EHDEAMGFCL FNNVAVAANY LLNERPDLGI 180
KKILIVDWDV HHGNGTQKMF YNDPRVLFFS VHRFDYGSFY PAEGDASHCF IGEEAGKGYN 240
INVPWEHGKC GDADYIAAWD HVLLPVTEAF DPDIILVSAG FDAALGDPLG GCCITPNGYA 300
LLLTKLLGFA KGRIVMALEG GYNLRSIANS VSACAKVLLG DKFTFSSPEM QPFESTWRVI 360
QAVRNELKTC WPVLSSKLPE NLSLRIKPSP SELYASSDSE PDSEDVDELS GAVSSVNVIQ 420
FADDAISEHL SKMKLDEDNL AVKTASSCST AEHHPTDSVQ VDKGVSVVLS KRISDLSLAW 480
RSDLSRIYVW YASFGSNMWK PRFLCYIQGG KVEGMSIPCC GSRDTSSPKG IMWKIVPHRL 540
LFGRSSTPCW GTGGVAFLNP EINYNEKSYV CMYKITLEQF NDILFQENRL VLEDGTDGNV 600
VYPDSPLIGS SEVEFMSTNK AIHLEPIKDS WYSNVLYLGD EDELPILTMT CPSSDIERYK 660
SGELPLAPPS KTYAATLIKG LVEGEQLDAD GAASYINAAA ARGL 704
Nucleotide Sequence
(Fasta)
ATGGCGGCGG CTCCGGCTCC CCCAGCGGTC GCGGCGTCCA GAGCGGCGCG GGTGGGGCTG 60
CTGTACGACG AGCGGATGTG CGCGCACGCG ACGCCCGACG GGGAGGAGCA CCCGGAGAAC 120
CCCGAGCGGC TGCGCGCCAT CTGGCGGAAG CTCAGCGCCG AGGGCGTCGC GTCCAGGTGT 180
GTGGTCCTTA AGGCGAAGGA AGCTGAGGAC AAGTATATAG CTTCTGTTCA CAGCCAGAAC 240
CATATAAAGC TGATGAAGGA AATTAGCTCG AAGAAATATG ATTCCAGCAG AAACAAGATT 300
GCCAGGAAAT ACAATTCCAT TTACTTCAAC AAGGGTTCCT CAGAGTCTGC TGTTCTTGCA 360
GCTGGTTCTG TCATAGAGGT TGCTGAGAAA GTTGCTGCTG GTGAGTTAAG TTCTGCTATT 420
GCCCTAGTCA GACCTCCAGG CCACCATGCA GAACATGATG AGGCAATGGG ATTTTGCCTC 480
TTCAACAATG TGGCAGTTGC AGCTAATTAT CTCTTAAATG AGAGGCCTGA TTTGGGTATC 540
AAGAAGATAC TGATTGTCGA TTGGGATGTT CACCATGGAA ATGGAACACA GAAAATGTTT 600
TACAATGATC CTCGTGTATT GTTCTTTTCA GTTCACAGAT TTGATTATGG AAGCTTCTAT 660
CCTGCTGAAG GGGATGCTTC TCACTGTTTC ATCGGAGAAG AAGCTGGTAA AGGGTATAAC 720
ATTAATGTTC CCTGGGAGCA TGGGAAGTGT GGTGATGCTG ATTATATTGC TGCATGGGAC 780
CATGTATTGC TTCCTGTCAC TGAAGCTTTT GATCCTGATA TAATATTGGT ATCGGCTGGG 840
TTCGATGCAG CACTGGGTGA TCCTCTCGGT GGTTGCTGCA TCACACCAAA TGGATATGCC 900
CTGCTACTAA CAAAGCTATT AGGATTTGCT AAAGGAAGGA TAGTGATGGC CCTTGAAGGA 960
GGTTATAACC TTAGGTCCAT AGCAAATTCA GTTTCTGCTT GTGCAAAAGT TCTCTTGGGA 1020
GACAAATTCA CGTTCAGCTC TCCAGAGATG CAGCCATTTG AATCTACATG GAGAGTTATA 1080
CAAGCGGTAC GCAATGAATT GAAAACATGC TGGCCTGTTT TGAGTAGCAA GCTGCCAGAG 1140
AATTTATCAT TGAGGATTAA GCCTTCACCA AGTGAGCTCT ACGCTTCCTC TGATTCTGAG 1200
CCTGACAGTG AAGATGTTGA TGAGCTCTCT GGTGCTGTTT CATCAGTCAA TGTTATTCAA 1260
TTTGCTGATG ATGCTATAAG TGAACACCTC TCAAAAATGA AACTTGATGA AGACAACCTT 1320
GCAGTGAAGA CTGCCTCAAG TTGCTCAACA GCAGAACATC ATCCAACTGA TTCAGTACAA 1380
GTAGATAAAG GTGTATCTGT GGTACTGTCC AAAAGAATAT CTGATTTATC TCTTGCTTGG 1440
CGATCAGATT TATCAAGAAT TTATGTCTGG TATGCCAGCT TTGGTTCAAA CATGTGGAAG 1500
CCAAGGTTTC TATGCTATAT TCAAGGGGGG AAGGTTGAGG GTATGAGTAT ACCATGTTGC 1560
GGATCACGTG ACACGAGCTC ACCAAAAGGA ATCATGTGGA AGATTGTGCC TCATAGGTTG 1620
CTTTTCGGTA GATCCTCTAC CCCTTGTTGG GGTACTGGTG GTGTTGCTTT CCTCAACCCT 1680
GAGATAAACT ACAATGAGAA GTCTTATGTC TGCATGTACA AAATAACGCT GGAGCAGTTC 1740
AATGATATCT TGTTTCAAGA GAATCGTCTA GTGCTGGAGG ATGGGACAGA TGGAAATGTT 1800
GTGTATCCTG ACTCTCCTTT GATTGGTTCA TCTGAAGTGG AGTTTATGTC TACAAATAAA 1860
GCTATTCATC TTGAACCTAT CAAGGATAGC TGGTACTCCA ATGTACTTTA TCTTGGGGAC 1920
GAGGATGAAC TTCCAATTCT TACTATGACG TGCCCCTCAT CAGATATTGA GCGGTACAAA 1980
TCTGGTGAGC TACCTCTAGC ACCTCCGTCA AAGACCTACG CCGCCACTCT GATAAAGGGA 2040
CTAGTGGAAG GGGAGCAACT GGATGCTGAC GGAGCTGCCA GCTACATCAA TGCTGCTGCT 2100
GCAAGAGGGT TGTGATTTGT GAAGGCTGCT TCAACGTGTG CTTGTACAGC CGGTAGGGAG 2160
TAGTAAGGAT AATATATTTT GCTAGCGTGT GATGACATCG ATTTAGGACC AGGAGTGATG 2220
TCCAGGCTTC ATTCTCCGCG AATGGAGATT CTGAATCCCC TTTTTTTTTT TAATACGCAG 2280
GAGAGCTGCG TATCTCTGTA TTAAGAAGAA ATTGTTCGTT ACGACACGGG CTAAACCGGG 2340
CACGTGCACA CGGACACATT ACACCTAAGG TGTTTACAAC CTGAAGAGAA AAAACACGC 2400
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sob-0036 Sb02g038550.1 Sorghum bicolor 90 0.0 1249
WERAM-Zem-0143 GRMZM2G457889_P01 Zea mays 88 0.0 1226
WERAM-Orgl-0076 OGLUM07G21150.1 Oryza glumaepatula 81 0.0 1140
WERAM-Org-0078 ORGLA07G0164500.1 Oryza glaberrima 81 0.0 1139
WERAM-Ori-0088 BGIOSGA026083-PA Oryza indica 80 0.0 1138
WERAM-Ors-0072 OS07T0602200-01 Oryza sativa 81 0.0 1136
WERAM-Orr-0082 ORUFI07G22240.1 Oryza rufipogon 81 0.0 1136
WERAM-Orni-0078 ONIVA07G19970.1 Oryza nivara 81 0.0 1118
WERAM-Orbr-0087 OB07G26850.1 Oryza brachyantha 79 0.0 1115
WERAM-Lep-0079 LPERR07G18450.1 Leersia perrieri 81 0.0 1112
WERAM-Tra-0099 Traes_2DS_DFCAF1EA5.1 Triticum aestivum 79 0.0 1096
WERAM-Orp-0076 OPUNC07G19850.1 Oryza punctata 77 0.0 1049
WERAM-Brd-0010 BRADI1G22240.1 Brachypodium distachyon 76 0.0 1041
WERAM-Aet-0088 EMT31322 Aegilops tauschii 78 0.0 1014
WERAM-Orl-0040 KN538895.1_FGP007 Oryza longistaminata 76 0.0 982
WERAM-Orb-0079 OBART07G21300.1 Oryza barthii 78 0.0 952
WERAM-Mua-0066 GSMUA_Achr4P03250_001 Musa acuminata 61 0.0 853
WERAM-Glm-0045 GLYMA05G00460.1 Glycine max 58 0.0 775
WERAM-Viv-0107 VIT_17s0000g07280.t01 Vitis vinifera 57 0.0 773
WERAM-Pot-0045 POPTR_0004s09180.1 Populus trichocarpa 57 0.0 770
WERAM-Thc-0031 EOY22062 Theobroma cacao 56 0.0 762
WERAM-Bro-0134 Bo7g098310.1 Brassica oleracea 55 0.0 746
WERAM-Brr-0068 Bra012984.1-P Brassica rapa 54 0.0 744
WERAM-Arl-0149 scaffold_802745.1 Arabidopsis lyrata 55 0.0 742
WERAM-Art-0146 AT5G61060.1 Arabidopsis thaliana 54 0.0 738
WERAM-Met-0112 KEH32016 Medicago truncatula 55 0.0 724
WERAM-Sol-0055 Solyc03g115150.2.1 Solanum lycopersicum 53 0.0 714
WERAM-Prp-0049 EMJ12067 Prunus persica 57 0.0 664
WERAM-Amt-0091 ERM99985 Amborella trichopoda 53 0.0 649
WERAM-Tru-0053 TRIUR3_22556-P1 Triticum urartu 82 8e-175 611
WERAM-Hov-0018 MLOC_16422.1 Hordeum vulgare 87 4e-173 605
WERAM-Sem-0022 EFJ08599 Selaginella moellendorffii 45 4e-163 572
WERAM-Php-0085 PP1S34_252V6.1 Physcomitrella patens 53 2e-113 407
WERAM-Pof-0022 ENSPFOP00000001799.2 Poecilia formosa 43 1e-85 315
WERAM-Xim-0160 ENSXMAP00000013063.1 Xiphophorus maculatus 44 5e-83 306
WERAM-Tar-0042 ENSTRUP00000010127.1 Takifugu rubripes 46 2e-82 304
WERAM-Ten-0019 ENSTNIP00000004593.1 Tetraodon nigroviridis 46 2e-82 304
WERAM-Ocp-0057 ENSOPRP00000005096.1 Ochotona princeps 44 2e-82 304
WERAM-Dar-0023 ENSDARP00000124246.1 Danio rerio 43 2e-82 304
WERAM-Mup-0158 ENSMPUP00000013557.1 Mustela putorius furo 46 3e-82 303
WERAM-Orn-0011 ENSONIP00000001061.1 Oreochromis niloticus 43 5e-82 303
WERAM-Myl-0104 ENSMLUP00000008295.2 Myotis lucifugus 45 6e-82 302
WERAM-Aim-0139 ENSAMEP00000013236.1 Ailuropoda melanoleuca 43 9e-82 302
WERAM-Mae-0111 ENSMEUP00000010640.1 Macropus eugenii 47 3e-81 300
WERAM-Ict-0125 ENSSTOP00000012693.2 Ictidomys tridecemlineatus 43 4e-81 300
WERAM-Eqc-0001 ENSECAP00000001121.1 Equus caballus 43 4e-81 300
WERAM-Ran-0209 ENSRNOP00000009295.5 Rattus norvegicus 44 5e-81 300
WERAM-Fec-0031 ENSFCAP00000002366.3 Felis catus 43 1e-80 298
WERAM-Pem-0058 ENSPMAP00000006830.1 Petromyzon marinus 42 2e-80 297
WERAM-Mum-0115 ENSMUSP00000033501.8 Mus musculus 44 2e-80 297
WERAM-Asm-0181 ENSAMXP00000017644.1 Astyanax mexicanus 41 4e-80 296
WERAM-Orc-0102 ENSOCUP00000008741.3 Oryctolagus cuniculus 43 4e-80 296
WERAM-Dan-0022 ENSDNOP00000002136.3 Dasypus novemcinctus 47 4e-80 296
WERAM-Dio-0075 ENSDORP00000007462.1 Dipodomys ordii 44 8e-80 295
WERAM-Caf-0161 ENSCAFP00000022990.3 Canis familiaris 43 1e-79 295
WERAM-Xet-0155 ENSXETP00000050501.3 Xenopus tropicalis 43 1e-78 291
WERAM-Anc-0082 ENSACAP00000007918.3 Anolis carolinensis 44 4e-78 290
WERAM-Cap-0109 ENSCPOP00000008049.2 Cavia porcellus 45 6e-78 289
WERAM-Mod-0081 ENSMODP00000012731.2 Monodelphis domestica 45 7e-78 289
WERAM-Ova-0124 ENSOARP00000012678.1 Ovis aries 45 1e-77 288
WERAM-Lac-0055 ENSLACP00000007918.1 Latimeria chalumnae 44 2e-77 288
WERAM-Sus-0177 ENSSSCP00000022636.1 Sus scrofa 42 3e-77 287
WERAM-Asn-0017 CADANIAP00004063 Aspergillus nidulans 42 4e-77 286
WERAM-Tum-0026 CAZ84932 Tuber melanosporum 44 2e-76 284
WERAM-Caj-0022 ENSCJAP00000004409.2 Callithrix jacchus 45 2e-76 284
WERAM-Hos-0047 ENSP00000365804.2 Homo sapiens 45 2e-76 284
WERAM-Chs-0158 ENSCSAP00000009365.1 Chlorocebus sabaeus 45 2e-76 284
WERAM-Paa-0049 ENSPANP00000006915.1 Papio anubis 45 2e-76 284
WERAM-Mam-0153 ENSMMUP00000021637.2 Macaca mulatta 45 2e-76 284
WERAM-Gog-0047 ENSGGOP00000004443.2 Gorilla gorilla 45 3e-76 284
WERAM-Loa-0047 ENSLAFP00000003196.3 Loxodonta africana 45 3e-76 283
WERAM-Otg-0144 ENSOGAP00000012420.2 Otolemur garnettii 43 4e-76 283
WERAM-Bot-0122 ENSBTAP00000017618.5 Bos taurus 44 6e-76 283
WERAM-Prc-0036 ENSPCAP00000003334.1 Procavia capensis 43 2e-75 281
WERAM-Caa-0034 KGT64501 Candida albicans 43 4e-75 280
WERAM-Ast-0014 CADATEAP00005667 Aspergillus terreus 41 3e-74 277
WERAM-Poa-0196 ENSPPYP00000022747.2 Pongo abelii 43 4e-74 276
WERAM-Drm-0028 FBpp0290988 Drosophila melanogaster 38 7e-74 276
WERAM-Pytr-0015 EDU46537 Pyrenophora triticirepentis 41 5e-73 273
WERAM-Asc-0002 CADACLAP00000048 Aspergillus clavatus 44 6e-73 273
WERAM-Nol-0078 ENSNLEP00000009627.2 Nomascus leucogenys 42 7e-73 272
WERAM-Lem-0023 CBX90551 Leptosphaeria maculans 39 8e-73 272
WERAM-Tut-0056 ENSTTRP00000004443.1 Tursiops truncatus 43 1e-72 272
WERAM-Pat-0185 ENSPTRP00000037550.5 Pan troglodytes 42 2e-72 271
WERAM-Pyt-0023 EFQ89752 Pyrenophora teres 40 2e-72 271
WERAM-Ptv-0077 ENSPVAP00000007213.1 Pteropus vampyrus 43 3e-72 270
WERAM-Gaa-0053 ENSGACP00000006953.1 Gasterosteus aculeatus 40 3e-72 270
WERAM-Kop-0012 CAY68916 Komagataella pastoris 40 3e-72 270
WERAM-Sah-0012 ENSSHAP00000001165.1 Sarcophilus harrisii 42 3e-72 270
WERAM-Kll-0020 CAG99415 Kluyveromyces lactis 31 4e-72 270
WERAM-Fia-0117 ENSFALP00000010126.1 Ficedula albicollis 36 5e-72 270
WERAM-Pes-0105 ENSPSIP00000013270.1 Pelodiscus sinensis 42 1e-71 268
WERAM-Orla-0013 ENSORLP00000001341.1 Oryzias latipes 40 4e-71 266
WERAM-Anp-0022 ENSAPLP00000003127.1 Anas platyrhynchos 39 7e-71 266
WERAM-Meg-0084 ENSMGAP00000008226.2 Meleagris gallopavo 40 1e-70 265
WERAM-Scj-0031 EEB08679 Schizosaccharomyces japonicus 42 2e-70 264
WERAM-Scp-0036 SPBC800.03.1:pep Schizosaccharomyces pombe 44 2e-70 264
WERAM-Yal-0023 CAG79971 Yarrowia lipolytica 39 3e-70 263
WERAM-Coi-0028 EAS30926 Coccidioides immitis 43 4e-70 263
WERAM-Mao-0002 MGG_01076T0 Magnaporthe oryzae 39 5e-70 263
WERAM-Cae-0008 C10E2.3a Caenorhabditis elegans 40 3e-69 261
WERAM-Leo-0130 ENSLOCP00000016135.1 Lepisosteus oculatus 41 3e-69 260
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 41 3e-69 260
WERAM-Gaga-0090 ENSGALP00000014065.4 Gallus gallus 39 4e-69 260
WERAM-Tas-0021 ENSTSYP00000002661.1 Tarsius syrichta 42 8e-69 259
WERAM-Miv-0034 MVLG_04888T0 Microbotryum violaceum 41 2e-68 257
WERAM-Tag-0050 ENSTGUP00000003338.1 Taeniopygia guttata 41 4e-68 257
Created Date 25-Jun-2016