Tag |
Content |
WERAM ID |
WERAM-Orb-0079 |
Ensembl Protein ID |
OBART07G21300.1 |
Gene Name |
|
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
4.70e-125 |
418.1 |
16 |
338 |
HDAC |
Class-I |
1.20e-39 |
137.8 |
20 |
329 |
|
Organism |
Oryza barthii |
Domain Profile |
HDAC Class-II
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletae.klekeelesltvdsdsiyl 94 +gl+yde+m++h+++ +++ hpE+peR++ai+++l++ g++++++ +ka++a+++ +++vHs++h++l+++ + k +++ ++++ + +siy+ OBART07G21300.1 16 VGLLYDERMCAHATPDGEE--HPENPERLRAIWRKLSADGVASRCMIMKAKEAEDKYIASVHSQNHIKLMRSISsKEYDSRRNKIARKLNSIYF 107 689************9999..***************************************************998888999999********** PP class-2.txt 95 esksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklk...vkkilivDwDvHhGnGtqeifykd 185 ++ s+++a la+G+v+e+++kv++gel+ ++a+vRPPGHHae+++amGFClfnnva+aa +l+++ + +kkilivDwDvHhGnGtq++fy+d OBART07G21300.1 108 NKGSSESAFLAAGSVIEVAEKVAAGELSSAIALVRPPGHHAEHNEAMGFCLFNNVAIAADYLLNERTdlgIKKILIVDWDVHHGNGTQKMFYSD 201 **************************************************************99877777************************ PP class-2.txt 186 pkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgglsvtak 279 p+vl++S+HR+d gsf+p+ g++++ +geg+g+g+n+Nv+w++g++gda+y+aa+++v+lp+a+ F+Pd+vlvsaGfDaa gdplgg+++t++ OBART07G21300.1 202 PRVLFFSVHRFDYGSFYPAEGDASYCFIGEGDGKGYNINVPWEHGKCGDADYIAAWDHVLLPVAEAFNPDIVLVSAGFDAALGDPLGGCCITPN 295 ********************************************************************************************** PP class-2.txt 280 cyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322 +ya l +ll++a+gr+v++lEGGynl++ia++v+a++k+Llg OBART07G21300.1 296 GYALLLTKLLGFAQGRIVMALEGGYNLRSIANSVSACAKVLLG 338 *****************************************96 PP
HDAC Class-I
class-1.txt 7 ydedvgeyhy..gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedc.Pvfdg 97 yde++ + + g++hp p+rl+ + + + g+ + i+k+k+a+ ++++++hs+++i++++++++++ ++ +++++ + ++ +g OBART07G21300.1 20 YDERMCAHATpdGEEHPENPERLRAIWRKLSADGVASRCMIMKAKEAEDKYIASVHSQNHIKLMRSISSKEYDSRRNKIAR---KLNSiYFNKG 110 555555444344899***********9999999***********************************9998877655443...2333034567 PP class-1.txt 98 lfeycqlitGasleaakkLnkkeadiainwa.GGlhhakkseasGfcyvnDivlailellkk.....hkrvlyididlhhGDgveeafyttdrv 185 e + l +G+ +e a+k+ +e ai hha ++ea Gfc n++ +a ll + k++l +d d+hhG+g ++ fy rv OBART07G21300.1 111 SSESAFLAAGSVIEVAEKVAAGELSSAIALVrPPGHHAEHNEAMGFCLFNNVAIAADYLLNErtdlgIKKILIVDWDVHHGNGTQKMFYSDPRV 204 88889999*************99888887641456********************99998742233369************************* PP class-1.txt 186 mtvsfhkyge.effPgtGdlsd..vgaekgkyyavnvPlkdg.idDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikgha 275 + s+h+++ +f+P+ Gd s +g+++gk y +nvP ++g + D y + +v+ +v eaf+P++v++ G D+ gD+lg ++ +g+a OBART07G21300.1 205 LFFSVHRFDYgSFYPAEGDASYcfIGEGDGKGYNINVPWEHGkCGDADYIAAWDHVLLPVAEAFNPDIVLVSAGFDAALGDPLGGCCITPNGYA 298 *******98525*******986447999*************9899************************************************* PP class-1.txt 276 ecvkfvksf.nlpllvlGGGGYtlrnvaRcw 305 + + f + +++ GGY+lr +a OBART07G21300.1 299 LLLTKLLGFaQGRIVMALEGGYNLRSIANSV 329 *999999996778888889******999765 PP
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Protein Sequence (Fasta) | MAAATTAAAA AAAARVGLLY DERMCAHATP DGEEHPENPE RLRAIWRKLS ADGVASRCMI 60 MKAKEAEDKY IASVHSQNHI KLMRSISSKE YDSRRNKIAR KLNSIYFNKG SSESAFLAAG 120 SVIEVAEKVA AGELSSAIAL VRPPGHHAEH NEAMGFCLFN NVAIAADYLL NERTDLGIKK 180 ILIVDWDVHH GNGTQKMFYS DPRVLFFSVH RFDYGSFYPA EGDASYCFIG EGDGKGYNIN 240 VPWEHGKCGD ADYIAAWDHV LLPVAEAFNP DIVLVSAGFD AALGDPLGGC CITPNGYALL 300 LTKLLGFAQG RIVMALEGGY NLRSIANSVS ACAKVLLGDK FRFDTPDMQP FESSWRVIQA 360 LYSSGSDSEV EDLPDAIASV NIIQITDGII SESLSKLNLD EDKIATKTTS SNVMVEGPTD 420 SVEPQNDGCA AVSTEGISSL SPTWRSDLSK VYVWYASFGS NMWTPRFLCY IQGGKAEGMN 480 IPCFGSHDTS PPRGSMWKTV PHRLFFGRSS TPCWGTGGVA FLNPEINHTE NSYVCMYKIT 540 LEQFNDVLFQ ENRLVKENGE SGKTESPDSP LIGLSEIEFV SRNKGVHLAP IKMPVIRRRA 600 MQIRRAAIVS SIQDLLRHPD KGTNGREAPG CRCGR 635Protein Fasta Sequence
>OBART07G21300.1|Class-I|Oryza barthii MAAATTAAAAAAAARVGLLYDERMCAHATPDGEEHPENPERLRAIWRKLSADGVASRCMIMKAKEAEDKYIASVHSQNHIKLMRSISSKEYDSRRNKIARKLNSIYFNKGSSESAFLAAGSVIEVAEKVAAGELSSAIALVRPPGHHAEHNEAMGFCLFNNVAIAADYLLNERTDLGIKKILIVDWDVHHGNGTQKMFYSDPRVLFFSVHRFDYGSFYPAEGDASYCFIGEGDGKGYNINVPWEHGKCGDADYIAAWDHVLLPVAEAFNPDIVLVSAGFDAALGDPLGGCCITPNGYALLLTKLLGFAQGRIVMALEGGYNLRSIANSVSACAKVLLGDKFRFDTPDMQPFESSWRVIQALYSSGSDSEVEDLPDAIASVNIIQITDGIISESLSKLNLDEDKIATKTTSSNVMVEGPTDSVEPQNDGCAAVSTEGISSLSPTWRSDLSKVYVWYASFGSNMWTPRFLCYIQGGKAEGMNIPCFGSHDTSPPRGSMWKTVPHRLFFGRSSTPCWGTGGVAFLNPEINHTENSYVCMYKITLEQFNDVLFQENRLVKENGESGKTESPDSPLIGLSEIEFVSRNKGVHLAPIKMPVIRRRAMQIRRAAIVSSIQDLLRHPDKGTNGREAPGCRCGR
|
Nucleotide Sequence (Fasta) | CTTCCCCCGC TCCATTTCCG AATCGTCGTC TCGTCTCCAC TTCCGACTTC CGAGTCGTCT 60 CGCCTCGCCG GCGCAGGATG GCGGCGGCGA CGACCGCCGC GGCGGCGGCG GCGGCGGCGA 120 GGGTGGGGCT GCTGTACGAC GAGAGGATGT GCGCGCACGC GACGCCCGAC GGGGAGGAGC 180 ACCCGGAGAA CCCCGAGAGG CTGCGGGCCA TCTGGCGCAA GCTCTCCGCC GACGGCGTCG 240 CCTCCAGGTG CATGATCATG AAAGCGAAGG AAGCTGAGGA CAAGTATATA GCTTCTGTCC 300 ATAGCCAGAA CCATATCAAG CTGATGAGGA GTATCAGCTC AAAAGAATAT GATTCCCGTC 360 GAAACAAGAT TGCTAGAAAA TTGAATTCCA TTTACTTCAA CAAGGGCTCC TCAGAGTCTG 420 CTTTTCTTGC AGCTGGTTCT GTGATTGAGG TAGCTGAGAA GGTTGCTGCA GGAGAGTTAA 480 GTTCTGCTAT TGCTCTAGTC CGACCTCCAG GTCACCATGC TGAACATAAT GAGGCAATGG 540 GTTTTTGCCT CTTCAACAAT GTAGCAATTG CTGCTGATTA TCTCTTAAAT GAGAGGACTG 600 ACTTAGGTAT CAAGAAGATA TTGATTGTCG ATTGGGATGT TCATCATGGA AATGGCACAC 660 AAAAGATGTT TTATAGTGAT CCTCGTGTAT TGTTCTTTTC AGTTCACAGA TTTGATTATG 720 GCAGCTTCTA TCCTGCTGAA GGGGATGCAT CTTACTGTTT CATTGGGGAA GGAGATGGTA 780 AAGGGTACAA CATTAACGTG CCCTGGGAAC ATGGAAAATG TGGTGATGCA GATTATATTG 840 CTGCATGGGA CCATGTACTA CTTCCTGTTG CTGAAGCATT TAACCCTGAT ATAGTCTTGG 900 TGTCTGCTGG GTTTGATGCA GCACTGGGTG ATCCTCTTGG TGGCTGCTGC ATCACTCCCA 960 ATGGATATGC TCTGCTACTG ACAAAGCTCT TAGGTTTTGC CCAAGGGAGG ATAGTGATGG 1020 CTCTTGAAGG AGGCTATAAC CTTAGATCCA TAGCAAATTC AGTTAGTGCT TGTGCTAAAG 1080 TTTTGTTGGG AGACAAGTTC AGATTTGACA CTCCTGATAT GCAACCGTTT GAATCTTCAT 1140 GGAGAGTTAT ACAAGCGCTG TATTCTTCTG GTTCTGACTC TGAAGTTGAA GATCTCCCTG 1200 ATGCTATTGC TTCTGTCAAT ATTATTCAAA TTACTGATGG TATTATAAGT GAAAGCCTCT 1260 CAAAGTTGAA CCTTGATGAA GACAAAATCG CAACAAAGAC CACCTCAAGT AATGTAATGG 1320 TTGAAGGTCC AACTGATTCA GTTGAACCAC AAAATGATGG ATGTGCTGCG GTGTCAACTG 1380 AAGGAATATC ATCTCTATCT CCTACTTGGA GATCAGATCT GTCAAAAGTA TATGTTTGGT 1440 ATGCCAGCTT TGGTTCAAAC ATGTGGACAC CAAGGTTTCT GTGCTACATC CAAGGGGGAA 1500 AGGCTGAGGG TATGAATATA CCATGTTTTG GATCTCATGA CACAAGCCCA CCAAGAGGTT 1560 CCATGTGGAA GACTGTGCCT CATAGATTGT TTTTTGGTAG ATCCTCTACT CCTTGCTGGG 1620 GAACTGGTGG TGTTGCTTTT CTCAACCCTG AGATAAACCA CACTGAGAAC TCCTATGTCT 1680 GCATGTATAA AATAACGCTC GAGCAGTTCA ATGATGTATT GTTTCAAGAG AATCGTTTAG 1740 TGAAGGAGAA CGGCGAAAGT GGAAAAACTG AGTCTCCTGA CTCTCCTTTG ATTGGCTTGT 1800 CTGAAATAGA GTTTGTTTCC AGAAACAAGG GTGTCCACCT TGCACCTATT AAGATGCCCG 1860 TCATCAGACG TAGAGCGATG CAGATCCGGA GAGCTGCCAT TGTGTCCTCC ATCCAAGACC 1920 TACTCCGCCA CCCTGATAAG GGGACTAATG GAAGGGAAGC ACCTGGATGC AGATGCGGCC 1980 GCTAGTTACA TCAACACTGC AGCTACCAGA GGCCTGTGAA GGCTGCTTCC CTATGCATTA 2040 TGGTTTGTAG TTTTGCACTA AGCATGTAAG TGGCTAACCC ACGAATCCGC TTATTTTCAC 2100 TTATAAGTGG GTTTGCAGAT TAGCCACTTA CGCGCTTAGT TTGTACAGCC AGTAGGAGCG 2160 TACTAGGACT GTAGGAGGAA TGATGAGTAG GTTTGCAGGA CTGTAAAGAT AGTGCGTTGA 2220 TCATTCAGGA CCACGGGGGC TTATGTAGAG GCCTCGTGAA TGTCCTGCCA ATTGGGGAAT 2280 CTGGACCCGA TCAAGTTTCC CTAGGATTGT TAAGAATCTA GCTAGCGCTT GTACCCTGGG 2340 TTGGTCATTG TCTCATTGGT GCTCTCCGGA TTGGTTTGTT TTGGGGTGGA AAAAAAAACA 2400 CTAGTCGATG TTGCCTGGTT TTTCATGCTG TTACCTGGCG AGGAAATGAC GATTTCTTGT 2460 GATTTC
2467Nucleotide Fasta Sequence
>OBART07G21300.1|Class-I|Oryza barthii CTTCCCCCGCTCCATTTCCGAATCGTCGTCTCGTCTCCACTTCCGACTTCCGAGTCGTCTCGCCTCGCCGGCGCAGGATGGCGGCGGCGACGACCGCCGCGGCGGCGGCGGCGGCGGCGAGGGTGGGGCTGCTGTACGACGAGAGGATGTGCGCGCACGCGACGCCCGACGGGGAGGAGCACCCGGAGAACCCCGAGAGGCTGCGGGCCATCTGGCGCAAGCTCTCCGCCGACGGCGTCGCCTCCAGGTGCATGATCATGAAAGCGAAGGAAGCTGAGGACAAGTATATAGCTTCTGTCCATAGCCAGAACCATATCAAGCTGATGAGGAGTATCAGCTCAAAAGAATATGATTCCCGTCGAAACAAGATTGCTAGAAAATTGAATTCCATTTACTTCAACAAGGGCTCCTCAGAGTCTGCTTTTCTTGCAGCTGGTTCTGTGATTGAGGTAGCTGAGAAGGTTGCTGCAGGAGAGTTAAGTTCTGCTATTGCTCTAGTCCGACCTCCAGGTCACCATGCTGAACATAATGAGGCAATGGGTTTTTGCCTCTTCAACAATGTAGCAATTGCTGCTGATTATCTCTTAAATGAGAGGACTGACTTAGGTATCAAGAAGATATTGATTGTCGATTGGGATGTTCATCATGGAAATGGCACACAAAAGATGTTTTATAGTGATCCTCGTGTATTGTTCTTTTCAGTTCACAGATTTGATTATGGCAGCTTCTATCCTGCTGAAGGGGATGCATCTTACTGTTTCATTGGGGAAGGAGATGGTAAAGGGTACAACATTAACGTGCCCTGGGAACATGGAAAATGTGGTGATGCAGATTATATTGCTGCATGGGACCATGTACTACTTCCTGTTGCTGAAGCATTTAACCCTGATATAGTCTTGGTGTCTGCTGGGTTTGATGCAGCACTGGGTGATCCTCTTGGTGGCTGCTGCATCACTCCCAATGGATATGCTCTGCTACTGACAAAGCTCTTAGGTTTTGCCCAAGGGAGGATAGTGATGGCTCTTGAAGGAGGCTATAACCTTAGATCCATAGCAAATTCAGTTAGTGCTTGTGCTAAAGTTTTGTTGGGAGACAAGTTCAGATTTGACACTCCTGATATGCAACCGTTTGAATCTTCATGGAGAGTTATACAAGCGCTGTATTCTTCTGGTTCTGACTCTGAAGTTGAAGATCTCCCTGATGCTATTGCTTCTGTCAATATTATTCAAATTACTGATGGTATTATAAGTGAAAGCCTCTCAAAGTTGAACCTTGATGAAGACAAAATCGCAACAAAGACCACCTCAAGTAATGTAATGGTTGAAGGTCCAACTGATTCAGTTGAACCACAAAATGATGGATGTGCTGCGGTGTCAACTGAAGGAATATCATCTCTATCTCCTACTTGGAGATCAGATCTGTCAAAAGTATATGTTTGGTATGCCAGCTTTGGTTCAAACATGTGGACACCAAGGTTTCTGTGCTACATCCAAGGGGGAAAGGCTGAGGGTATGAATATACCATGTTTTGGATCTCATGACACAAGCCCACCAAGAGGTTCCATGTGGAAGACTGTGCCTCATAGATTGTTTTTTGGTAGATCCTCTACTCCTTGCTGGGGAACTGGTGGTGTTGCTTTTCTCAACCCTGAGATAAACCACACTGAGAACTCCTATGTCTGCATGTATAAAATAACGCTCGAGCAGTTCAATGATGTATTGTTTCAAGAGAATCGTTTAGTGAAGGAGAACGGCGAAAGTGGAAAAACTGAGTCTCCTGACTCTCCTTTGATTGGCTTGTCTGAAATAGAGTTTGTTTCCAGAAACAAGGGTGTCCACCTTGCACCTATTAAGATGCCCGTCATCAGACGTAGAGCGATGCAGATCCGGAGAGCTGCCATTGTGTCCTCCATCCAAGACCTACTCCGCCACCCTGATAAGGGGACTAATGGAAGGGAAGCACCTGGATGCAGATGCGGCCGCTAGTTACATCAACACTGCAGCTACCAGAGGCCTGTGAAGGCTGCTTCCCTATGCATTATGGTTTGTAGTTTTGCACTAAGCATGTAAGTGGCTAACCCACGAATCCGCTTATTTTCACTTATAAGTGGGTTTGCAGATTAGCCACTTACGCGCTTAGTTTGTACAGCCAGTAGGAGCGTACTAGGACTGTAGGAGGAATGATGAGTAGGTTTGCAGGACTGTAAAGATAGTGCGTTGATCATTCAGGACCACGGGGGCTTATGTAGAGGCCTCGTGAATGTCCTGCCAATTGGGGAATCTGGACCCGATCAAGTTTCCCTAGGATTGTTAAGAATCTAGCTAGCGCTTGTACCCTGGGTTGGTCATTGTCTCATTGGTGCTCTCCGGATTGGTTTGTTTTGGGGTGGAAAAAAAAACACTAGTCGATGTTGCCTGGTTTTTCATGCTGTTACCTGGCGAGGAAATGACGATTTCTTGTGATTTC
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |