Tag |
Content |
WERAM ID |
WERAM-Sol-0055 |
Ensembl Protein ID |
Solyc03g115150.2.1 |
Gene Name |
|
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
6.00e-126 |
420.7 |
9 |
329 |
HDAC |
Class-I |
9.40e-36 |
124.7 |
11 |
319 |
|
Organism |
Solanum lycopersicum |
Domain Profile |
HDAC Class-II
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeelesltvdsdsi 92 +gl+yd++m kh lee k hpE+++Riq+i+++l+++g++++++ + +++a++e++ lvH+++h++ +++ +++e+ ++++++++s+ Solyc03g115150.2.1 9 VGLIYDKRMKKHFDLEEVK--HPESADRIQKIWNKLKDSGIAKRCTVMGGKEAKDEHISLVHNRKHIDFIKSISSKEEMFWKEMAKKYNSV 97 689**********999999..****************************************************9999999999******** PP class-2.txt 93 ylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklk...vkkilivDwDvHhGnGtqe 180 y+++ s++aa +++G+v+e+++kv++gel+ +fa+vRPPGHHae++++mGFClfnnva+a+k+l++k + +kkilivDwDvHhGnGtq+ Solyc03g115150.2.1 98 YFNQGSSEAAYISAGCVIEVAEKVAEGELDSAFAIVRPPGHHAEPNQPMGFCLFNNVAIATKYLLDKRAdlgIKKILIVDWDVHHGNGTQK 188 ****************************************************************99887788******************* PP class-2.txt 181 ifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdpl 271 +f+kdp+vl++S+HR+d g+++p + g+ + +geg+g+g+n+Nv+w++g++gda+yla++++v++p+akeF Pd++l+saGfDaa gdpl Solyc03g115150.2.1 189 MFWKDPRVLFFSVHRHDFGTYYPCDEAGSHKMTGEGAGKGYNINVPWEHGGCGDADYLAVWDHVLIPVAKEFGPDIILISAGFDAAIGDPL 279 ***********************9999**************************************************************** PP class-2.txt 272 gglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLl 321 gg++v++++ya + ++ll++agg++v++lEGGy+ +ia++v+a++++Ll Solyc03g115150.2.1 280 GGCCVSPHGYAVMLNKLLEFAGGKIVMALEGGYDKVSIANSVQACMEVLL 329 ************************************************98 PP
HDAC Class-I
class-1.txt 5 yaydedvgeyhy..gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcP 93 +yd+++ +++ ++khp r++ + + + + g+ k+ +++ k+a+ e+++ +h+ ++i+f+k+++++++ ++ kk+n Solyc03g115150.2.1 11 LIYDKRMKKHFDleEVKHPESADRIQKIWNKLKDSGIAKRCTVMGGKEAKDEHISLVHNRKHIDFIKSISSKEEMFWKEMAKKYNSV---Y 98 566666654432236799*****************************************************9999999999999954...4 PP class-1.txt 94 vfdglfeycqlitGasleaakkLnkkeadiainw.aGGlhhakkseasGfcyvnDivlailellkk.....hkrvlyididlhhGDgveea 178 +g e + +++G +e a+k+ ++e d a hha ++ Gfc n++ +a ll k k++l +d d+hhG+g ++ Solyc03g115150.2.1 99 FNQGSSEAAYISAGCVIEVAEKVAEGELDSAFAIvRPPGHHAEPNQPMGFCLFNNVAIATKYLLDKradlgIKKILIVDWDVHHGNGTQKM 189 5678899999****************9887655413445*********************9998652333369****************** PP class-1.txt 179 fyttdrvmtvsfhkyg.eeffPg..tGdlsdvgaekgkyyavnvPlkd.gidDesyekifksviskvieafePeavvlqcGaDslagDrlg 265 f + rv+ s+h+++ +++P +G+ + +g++ gk y +nvP ++ g+ D y ++ +v+ +v + f P+++++ G D+ gD+lg Solyc03g115150.2.1 190 FWKDPRVLFFSVHRHDfGTYYPCdeAGSHKMTGEGAGKGYNINVPWEHgGCGDADYLAVWDHVLIPVAKEFGPDIILISAGFDAAIGDPLG 280 ************9976335999644799999***************9846***************************************** PP class-1.txt 266 efnlsikghaecvkfvksf.nlpllvlGGGGYtlrnvaR 303 +s +g+a +++ + +f ++++ GGY + +a Solyc03g115150.2.1 281 GCCVSPHGYAVMLNKLLEFaGGKIVMALEGGYDKVSIAN 319 *******************666777888999*9988875 PP
|
Protein Sequence (Fasta) | MDSGERRRVG LIYDKRMKKH FDLEEVKHPE SADRIQKIWN KLKDSGIAKR CTVMGGKEAK 60 DEHISLVHNR KHIDFIKSIS SKEEMFWKEM AKKYNSVYFN QGSSEAAYIS AGCVIEVAEK 120 VAEGELDSAF AIVRPPGHHA EPNQPMGFCL FNNVAIATKY LLDKRADLGI KKILIVDWDV 180 HHGNGTQKMF WKDPRVLFFS VHRHDFGTYY PCDEAGSHKM TGEGAGKGYN INVPWEHGGC 240 GDADYLAVWD HVLIPVAKEF GPDIILISAG FDAAIGDPLG GCCVSPHGYA VMLNKLLEFA 300 GGKIVMALEG GYDKVSIANS VQACMEVLLK QKPIIGSSEA YPFESSWRVI RAVRKTLSPF 360 WQSLSERLPV KITSMSSPYI QVVSSDSEDE YNTFSNRVSQ HLEMDIENVI QPFSDLKVND 420 DTGQASNNSH TWREELSKID IWYATFGSNM KLSRFLCYIE GGQVEGMRKP CIGSLDKSKP 480 KEIKWESFPH RLFFAREHTA TWGPGGVAFL HPECNSDEKA YLCLYRITLE QFNDVLLQEN 540 TSSFDMNYPL FDMTDLQSIE ERKCVPVEAV KNGWYHNVLY LGKENGIPIL TMTCQLSDVD 600 NFKSGKVGMC KPSKEYANTL IRGLVEGKQL SEEEATTYIQ EAASRAL 647Protein Fasta Sequence
>Solyc03g115150.2.1|Class-I|Solanum lycopersicum MDSGERRRVGLIYDKRMKKHFDLEEVKHPESADRIQKIWNKLKDSGIAKRCTVMGGKEAKDEHISLVHNRKHIDFIKSISSKEEMFWKEMAKKYNSVYFNQGSSEAAYISAGCVIEVAEKVAEGELDSAFAIVRPPGHHAEPNQPMGFCLFNNVAIATKYLLDKRADLGIKKILIVDWDVHHGNGTQKMFWKDPRVLFFSVHRHDFGTYYPCDEAGSHKMTGEGAGKGYNINVPWEHGGCGDADYLAVWDHVLIPVAKEFGPDIILISAGFDAAIGDPLGGCCVSPHGYAVMLNKLLEFAGGKIVMALEGGYDKVSIANSVQACMEVLLKQKPIIGSSEAYPFESSWRVIRAVRKTLSPFWQSLSERLPVKITSMSSPYIQVVSSDSEDEYNTFSNRVSQHLEMDIENVIQPFSDLKVNDDTGQASNNSHTWREELSKIDIWYATFGSNMKLSRFLCYIEGGQVEGMRKPCIGSLDKSKPKEIKWESFPHRLFFAREHTATWGPGGVAFLHPECNSDEKAYLCLYRITLEQFNDVLLQENTSSFDMNYPLFDMTDLQSIEERKCVPVEAVKNGWYHNVLYLGKENGIPILTMTCQLSDVDNFKSGKVGMCKPSKEYANTLIRGLVEGKQLSEEEATTYIQEAASRAL
|
Nucleotide Sequence (Fasta) | TCAGTTTTGC CAGTCACTGT GTACTCACTA GGAGAAATTG ATTTTCGCTA TCAATCTACA 60 AGTCTTCCAT GGATTCCGGT GAACGACGGC GCGTTGGACT GATATACGAT AAAAGAATGA 120 AAAAGCATTT TGATCTAGAA GAAGTGAAAC ATCCGGAGAG TGCAGATCGT ATTCAGAAAA 180 TCTGGAACAA GCTTAAGGAT TCAGGAATCG CTAAGAGATG TACTGTTATG GGTGGAAAGG 240 AAGCCAAGGA TGAACATATA TCTTTGGTTC ATAACAGAAA ACATATAGAT TTCATCAAAA 300 GCATTAGCTC AAAAGAAGAG ATGTTCTGGA AAGAGATGGC TAAGAAGTAC AATTCGGTAT 360 ACTTCAATCA AGGCTCTTCA GAAGCAGCTT ACATTTCTGC AGGCTGTGTG ATTGAGGTTG 420 CTGAGAAAGT TGCTGAAGGA GAACTAGACT CTGCCTTTGC CATTGTCAGG CCTCCTGGTC 480 ATCACGCAGA ACCAAATCAA CCAATGGGAT TTTGCTTATT TAACAATGTT GCTATAGCTA 540 CAAAATATCT CTTGGATAAA AGAGCTGATT TGGGGATCAA GAAGATCTTA ATAGTTGATT 600 GGGATGTCCA TCATGGAAAT GGCACCCAAA AGATGTTTTG GAAGGACCCT CGAGTTCTCT 660 TCTTTTCTGT GCATAGGCAC GATTTTGGAA CTTATTATCC TTGTGATGAA GCTGGGTCGC 720 ACAAAATGAC TGGTGAAGGA GCGGGAAAAG GATACAATAT AAATGTTCCT TGGGAGCATG 780 GCGGTTGTGG TGATGCAGAC TATCTTGCTG TGTGGGATCA TGTCTTGATT CCTGTTGCCA 840 AAGAATTTGG TCCTGACATT ATCCTGATCT CAGCAGGATT TGATGCAGCT ATTGGTGATC 900 CTCTTGGTGG ATGTTGTGTT AGTCCACACG GATATGCTGT AATGTTGAAC AAGTTGTTGG 960 AATTTGCCGG AGGCAAGATT GTAATGGCAC TTGAAGGTGG ATATGATAAG GTCTCTATAG 1020 CAAATTCTGT GCAAGCTTGT ATGGAAGTGT TATTAAAGCA AAAACCAATT ATTGGATCTT 1080 CTGAGGCTTA TCCATTTGAA TCCTCATGGC GAGTGATACG GGCTGTACGT AAAACGTTGA 1140 GTCCATTTTG GCAATCATTA TCGGAGAGAT TACCAGTGAA GATCACTAGC ATGAGCTCTC 1200 CTTACATTCA GGTCGTTAGC TCTGATTCTG AAGATGAGTA CAACACCTTT TCTAACAGGG 1260 TATCACAACA TTTGGAGATG GATATTGAGA ATGTAATTCA ACCATTTTCA GACCTGAAAG 1320 TTAATGATGA CACAGGTCAA GCTAGCAATA ATTCTCACAC TTGGAGGGAA GAGCTTTCAA 1380 AGATTGATAT ATGGTATGCC ACGTTTGGAT CAAATATGAA GTTATCAAGG TTCCTTTGCT 1440 ATATTGAAGG AGGACAGGTG GAAGGCATGC GAAAGCCATG TATTGGTTCT TTGGATAAAA 1500 GCAAGCCAAA GGAGATCAAA TGGGAATCTT TTCCCCATCG CCTATTCTTT GCTCGTGAGC 1560 ATACAGCTAC CTGGGGTCCG GGTGGGGTTG CTTTTCTTCA CCCTGAATGC AACAGTGATG 1620 AAAAAGCTTA CTTGTGCCTA TATAGGATAA CGCTTGAGCA ATTTAATGAT GTTTTACTTC 1680 AAGAGAATAC TTCAAGCTTT GACATGAATT ACCCTTTGTT TGACATGACT GACTTACAAT 1740 CTATTGAAGA AAGAAAATGT GTTCCAGTGG AGGCTGTCAA GAATGGCTGG TACCATAATG 1800 TGCTTTACCT GGGAAAGGAG AATGGTATTC CTATTTTGAC AATGACATGC CAACTGTCAG 1860 ATGTTGATAA CTTCAAATCA GGTAAAGTAG GTATGTGCAA ACCATCTAAA GAATATGCCA 1920 ACACTCTGAT TAGAGGTTTG GTAGAAGGGA AGCAGTTATC AGAAGAGGAA GCCACCACTT 1980 ACATACAAGA AGCAGCTAGC AGAGCATTGT AACTGCCCTA TCCTGCTTGT TTGTTTGTAC 2040 AGTTGACAAT TATGTGAGTA TAATGCCTAG CAACATATGA ACCAGAAATG TTTTTGTGCC 2100 ATATTTTTTG CGGAAGCAAC TTCTTCCTAT TTGGTCAGGG TGTATATAAC TTGTTGGATC 2160 GACGTAAATT TTTCTGATTC CTTCTTTCAA CTGCAATATT TTTGGCTAAG CAGTTGAAAT 2220 GTATTTTGCC CACAAACTAC TCTGATCATG TCCATTGAAT GTGGCAGTTA GTAGCTGATC 2280 CCAGTATTTG T
2292Nucleotide Fasta Sequence
>Solyc03g115150.2.1|Class-I|Solanum lycopersicum TCAGTTTTGCCAGTCACTGTGTACTCACTAGGAGAAATTGATTTTCGCTATCAATCTACAAGTCTTCCATGGATTCCGGTGAACGACGGCGCGTTGGACTGATATACGATAAAAGAATGAAAAAGCATTTTGATCTAGAAGAAGTGAAACATCCGGAGAGTGCAGATCGTATTCAGAAAATCTGGAACAAGCTTAAGGATTCAGGAATCGCTAAGAGATGTACTGTTATGGGTGGAAAGGAAGCCAAGGATGAACATATATCTTTGGTTCATAACAGAAAACATATAGATTTCATCAAAAGCATTAGCTCAAAAGAAGAGATGTTCTGGAAAGAGATGGCTAAGAAGTACAATTCGGTATACTTCAATCAAGGCTCTTCAGAAGCAGCTTACATTTCTGCAGGCTGTGTGATTGAGGTTGCTGAGAAAGTTGCTGAAGGAGAACTAGACTCTGCCTTTGCCATTGTCAGGCCTCCTGGTCATCACGCAGAACCAAATCAACCAATGGGATTTTGCTTATTTAACAATGTTGCTATAGCTACAAAATATCTCTTGGATAAAAGAGCTGATTTGGGGATCAAGAAGATCTTAATAGTTGATTGGGATGTCCATCATGGAAATGGCACCCAAAAGATGTTTTGGAAGGACCCTCGAGTTCTCTTCTTTTCTGTGCATAGGCACGATTTTGGAACTTATTATCCTTGTGATGAAGCTGGGTCGCACAAAATGACTGGTGAAGGAGCGGGAAAAGGATACAATATAAATGTTCCTTGGGAGCATGGCGGTTGTGGTGATGCAGACTATCTTGCTGTGTGGGATCATGTCTTGATTCCTGTTGCCAAAGAATTTGGTCCTGACATTATCCTGATCTCAGCAGGATTTGATGCAGCTATTGGTGATCCTCTTGGTGGATGTTGTGTTAGTCCACACGGATATGCTGTAATGTTGAACAAGTTGTTGGAATTTGCCGGAGGCAAGATTGTAATGGCACTTGAAGGTGGATATGATAAGGTCTCTATAGCAAATTCTGTGCAAGCTTGTATGGAAGTGTTATTAAAGCAAAAACCAATTATTGGATCTTCTGAGGCTTATCCATTTGAATCCTCATGGCGAGTGATACGGGCTGTACGTAAAACGTTGAGTCCATTTTGGCAATCATTATCGGAGAGATTACCAGTGAAGATCACTAGCATGAGCTCTCCTTACATTCAGGTCGTTAGCTCTGATTCTGAAGATGAGTACAACACCTTTTCTAACAGGGTATCACAACATTTGGAGATGGATATTGAGAATGTAATTCAACCATTTTCAGACCTGAAAGTTAATGATGACACAGGTCAAGCTAGCAATAATTCTCACACTTGGAGGGAAGAGCTTTCAAAGATTGATATATGGTATGCCACGTTTGGATCAAATATGAAGTTATCAAGGTTCCTTTGCTATATTGAAGGAGGACAGGTGGAAGGCATGCGAAAGCCATGTATTGGTTCTTTGGATAAAAGCAAGCCAAAGGAGATCAAATGGGAATCTTTTCCCCATCGCCTATTCTTTGCTCGTGAGCATACAGCTACCTGGGGTCCGGGTGGGGTTGCTTTTCTTCACCCTGAATGCAACAGTGATGAAAAAGCTTACTTGTGCCTATATAGGATAACGCTTGAGCAATTTAATGATGTTTTACTTCAAGAGAATACTTCAAGCTTTGACATGAATTACCCTTTGTTTGACATGACTGACTTACAATCTATTGAAGAAAGAAAATGTGTTCCAGTGGAGGCTGTCAAGAATGGCTGGTACCATAATGTGCTTTACCTGGGAAAGGAGAATGGTATTCCTATTTTGACAATGACATGCCAACTGTCAGATGTTGATAACTTCAAATCAGGTAAAGTAGGTATGTGCAAACCATCTAAAGAATATGCCAACACTCTGATTAGAGGTTTGGTAGAAGGGAAGCAGTTATCAGAAGAGGAAGCCACCACTTACATACAAGAAGCAGCTAGCAGAGCATTGTAACTGCCCTATCCTGCTTGTTTGTTTGTACAGTTGACAATTATGTGAGTATAATGCCTAGCAACATATGAACCAGAAATGTTTTTGTGCCATATTTTTTGCGGAAGCAACTTCTTCCTATTTGGTCAGGGTGTATATAACTTGTTGGATCGACGTAAATTTTTCTGATTCCTTCTTTCAACTGCAATATTTTTGGCTAAGCAGTTGAAATGTATTTTGCCCACAAACTACTCTGATCATGTCCATTGAATGTGGCAGTTAGTAGCTGATCCCAGTATTTGT
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |