Tag |
Content |
WERAM ID |
WERAM-Orni-0078 |
Ensembl Protein ID |
ONIVA07G19970.1 |
Gene Name |
|
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
5.80e-125 |
418 |
13 |
335 |
HDAC |
Class-I |
6.60e-40 |
138.8 |
17 |
326 |
|
Organism |
Oryza nivara |
Domain Profile |
HDAC Class-II
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletae.klekeelesltvdsdsiyl 94 +gl+yde+m++h+++ +++ hpE+peR++ai+++l++ g++++++ +ka++a+++ +++vHs++h++l+++ + k +++ ++++ +++siy+ ONIVA07G19970.1 13 VGLLYDERMCAHATPDGEE--HPENPERLRAIWRKLSADGVASRCMIMKAKEAEDKYIASVHSQNHIKLMRSISsKEYDSRRNKIARKFNSIYF 104 689************9999..***************************************************998888999999********** PP class-2.txt 95 esksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklk...vkkilivDwDvHhGnGtqeifykd 185 ++ s+++a la+G+v+e+++kv++gel+ ++a+vRPPGHHae+++amGFClfnnva+aa +l+++ + +kkilivDwDvHhGnGtq++fy+d ONIVA07G19970.1 105 NKGSSESAFLAAGSVIEVAEKVAAGELSSAIALVRPPGHHAEHNEAMGFCLFNNVAIAADYLLNERTdlgIKKILIVDWDVHHGNGTQKMFYSD 198 **************************************************************99877777************************ PP class-2.txt 186 pkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgglsvtak 279 p+vl++S+HR+d gsf+p+ g++++ +geg+g+g+n+Nv+w++g++gda+y+aa+++v+lp+a+ F+Pd+vlvsaGfDaa gdplgg+++t++ ONIVA07G19970.1 199 PRVLFFSVHRFDYGSFYPAEGDASYCFIGEGDGKGYNINVPWEHGKCGDADYIAAWDHVLLPVAEAFNPDIVLVSAGFDAALGDPLGGCCITPN 292 ********************************************************************************************** PP class-2.txt 280 cyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322 +ya l +ll++a+gr+v++lEGGynl++ia++v+a++k+Llg ONIVA07G19970.1 293 GYALLLTKLLGFAQGRIVMALEGGYNLRSIANSVSACAKVLLG 335 *****************************************96 PP
HDAC Class-I
class-1.txt 7 ydedvgeyhy..gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeels.kelkkfnvgedcPvfdg 97 yde++ + + g++hp p+rl+ + + + g+ + i+k+k+a+ ++++++hs+++i++++++++++ ++ k +kfn +g ONIVA07G19970.1 17 YDERMCAHATpdGEEHPENPERLRAIWRKLSADGVASRCMIMKAKEAEDKYIASVHSQNHIKLMRSISSKEYDSRRnKIARKFNSI---YFNKG 107 555555444344899***********9999999***********************************999887662556778743...45578 PP class-1.txt 98 lfeycqlitGasleaakkLnkkeadiainwa.GGlhhakkseasGfcyvnDivlailellkk.....hkrvlyididlhhGDgveeafyttdrv 185 e + l +G+ +e a+k+ +e ai hha ++ea Gfc n++ +a ll + k++l +d d+hhG+g ++ fy rv ONIVA07G19970.1 108 SSESAFLAAGSVIEVAEKVAAGELSSAIALVrPPGHHAEHNEAMGFCLFNNVAIAADYLLNErtdlgIKKILIVDWDVHHGNGTQKMFYSDPRV 201 88999999*************99888887641456********************99998742233369************************* PP class-1.txt 186 mtvsfhkyge.effPgtGdlsd..vgaekgkyyavnvPlkdg.idDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikgha 275 + s+h+++ +f+P+ Gd s +g+++gk y +nvP ++g + D y + +v+ +v eaf+P++v++ G D+ gD+lg ++ +g+a ONIVA07G19970.1 202 LFFSVHRFDYgSFYPAEGDASYcfIGEGDGKGYNINVPWEHGkCGDADYIAAWDHVLLPVAEAFNPDIVLVSAGFDAALGDPLGGCCITPNGYA 295 *******98525*******986447999*************9899************************************************* PP class-1.txt 276 ecvkfvksf.nlpllvlGGGGYtlrnvaRcw 305 + + f + +++ GGY+lr +a ONIVA07G19970.1 296 LLLTKLLGFaQGRIVMALEGGYNLRSIANSV 326 *999999996778888889******999765 PP
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Protein Sequence (Fasta) | MAAATTAAAA ARVGLLYDER MCAHATPDGE EHPENPERLR AIWRKLSADG VASRCMIMKA 60 KEAEDKYIAS VHSQNHIKLM RSISSKEYDS RRNKIARKFN SIYFNKGSSE SAFLAAGSVI 120 EVAEKVAAGE LSSAIALVRP PGHHAEHNEA MGFCLFNNVA IAADYLLNER TDLGIKKILI 180 VDWDVHHGNG TQKMFYSDPR VLFFSVHRFD YGSFYPAEGD ASYCFIGEGD GKGYNINVPW 240 EHGKCGDADY IAAWDHVLLP VAEAFNPDIV LVSAGFDAAL GDPLGGCCIT PNGYALLLTK 300 LLGFAQGRIV MALEGGYNLR SIANSVSACA KVLLGDKFRF DTPDMQPFES SWRVIQAVRD 360 ELKTFWPILS NRLPENISLR SRPSQIELYS SGSDSEVEDL PDAIASVNII QITDGIISES 420 LSKLNLDEDK IATKTTSSNV MVEGPTDSVE PQNDGSAAVS TEGISSLSST WRSELSKVYV 480 WYASFGSNMW TPRFLCYIQG GKAEGMNIPC FGSHDTSPPR GSMWKTVPHR LFFGRSSTPC 540 WGTGGVAFLN PEINHTENSY VCMYKITLEQ FNDVLFQENR LVKENGESGK TESPDSPLIG 600 LSEIEFVSRN KGVHLAPIKD SWYSNVLYLG EEDNLPILTM TCPSSDVERC RSGELPLCPP 660 SKTYSATLIR GLMEGKHLDA DAAAKLYEVW GAVLRTQERD TICTGQVRRC GVSCNGGRER 720 EEVWVWKDER Protein Fasta Sequence
>ONIVA07G19970.1|Class-I|Oryza nivara MAAATTAAAAARVGLLYDERMCAHATPDGEEHPENPERLRAIWRKLSADGVASRCMIMKAKEAEDKYIASVHSQNHIKLMRSISSKEYDSRRNKIARKFNSIYFNKGSSESAFLAAGSVIEVAEKVAAGELSSAIALVRPPGHHAEHNEAMGFCLFNNVAIAADYLLNERTDLGIKKILIVDWDVHHGNGTQKMFYSDPRVLFFSVHRFDYGSFYPAEGDASYCFIGEGDGKGYNINVPWEHGKCGDADYIAAWDHVLLPVAEAFNPDIVLVSAGFDAALGDPLGGCCITPNGYALLLTKLLGFAQGRIVMALEGGYNLRSIANSVSACAKVLLGDKFRFDTPDMQPFESSWRVIQAVRDELKTFWPILSNRLPENISLRSRPSQIELYSSGSDSEVEDLPDAIASVNIIQITDGIISESLSKLNLDEDKIATKTTSSNVMVEGPTDSVEPQNDGSAAVSTEGISSLSSTWRSELSKVYVWYASFGSNMWTPRFLCYIQGGKAEGMNIPCFGSHDTSPPRGSMWKTVPHRLFFGRSSTPCWGTGGVAFLNPEINHTENSYVCMYKITLEQFNDVLFQENRLVKENGESGKTESPDSPLIGLSEIEFVSRNKGVHLAPIKDSWYSNVLYLGEEDNLPILTMTCPSSDVERCRSGELPLCPPSKTYSATLIRGLMEGKHLDADAAAKLYEVWGAVLRTQERDTICTGQVRRCGVSCNGGREREEVWVWKDER
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Nucleotide Sequence (Fasta) | CGCTCCATTT CCGAATCGTC GTCTCGCCTC CACTTCAGAC TTCCGAGTCG TCTCGCCTCG 60 CCGGCGCAGG ATGGCGGCGG CGACGACCGC CGCGGCGGCG GCGAGGGTGG GGCTGCTGTA 120 CGACGAGAGG ATGTGCGCGC ACGCGACGCC CGACGGGGAG GAGCACCCGG AGAACCCCGA 180 GAGGCTGCGG GCCATCTGGC GCAAGCTCTC CGCCGACGGC GTCGCCTCCA GGTGCATGAT 240 CATGAAAGCG AAGGAAGCTG AGGACAAGTA TATAGCTTCT GTCCATAGCC AGAACCATAT 300 CAAGCTGATG AGGAGTATCA GCTCAAAAGA ATATGATTCC CGTCGAAACA AGATTGCTAG 360 AAAATTTAAT TCCATTTACT TCAACAAGGG CTCCTCAGAG TCTGCTTTTC TTGCAGCTGG 420 TTCTGTGATT GAGGTAGCTG AGAAGGTTGC TGCAGGAGAG TTAAGTTCTG CTATTGCTCT 480 AGTCCGACCT CCAGGTCACC ATGCTGAACA TAATGAGGCA ATGGGTTTTT GCCTCTTCAA 540 CAATGTAGCA ATTGCTGCTG ATTATCTCTT AAATGAGAGG ACTGACTTAG GTATCAAGAA 600 GATATTGATT GTCGATTGGG ATGTTCATCA TGGAAATGGC ACACAAAAGA TGTTTTATAG 660 TGATCCTCGT GTATTGTTCT TTTCAGTTCA CAGATTTGAT TATGGCAGCT TCTATCCTGC 720 TGAAGGGGAT GCATCTTACT GTTTCATTGG GGAAGGAGAT GGTAAAGGGT ACAACATTAA 780 TGTGCCCTGG GAACATGGAA AATGTGGTGA TGCAGATTAT ATTGCTGCAT GGGACCATGT 840 ACTACTTCCT GTTGCTGAAG CATTTAACCC TGATATAGTC TTGGTGTCTG CTGGGTTTGA 900 TGCAGCACTG GGTGATCCTC TTGGTGGCTG CTGCATCACT CCCAATGGAT ATGCTCTGCT 960 ACTGACAAAG CTCTTAGGTT TTGCCCAAGG GAGGATAGTG ATGGCTCTTG AAGGAGGCTA 1020 TAACCTTAGA TCCATAGCAA ATTCAGTTAG TGCTTGTGCT AAAGTTTTGT TGGGAGACAA 1080 GTTCAGATTT GACACTCCTG ATATGCAACC GTTTGAATCT TCATGGAGAG TTATACAAGC 1140 GGTACGTGAT GAATTGAAGA CGTTCTGGCC TATTCTGAGT AATAGATTGC CAGAGAATAT 1200 ATCATTGAGG AGTAGGCCCT CACAAATTGA GCTGTATTCT TCTGGTTCTG ACTCTGAAGT 1260 TGAAGATCTC CCTGATGCTA TTGCTTCTGT CAATATTATT CAAATTACTG ATGGTATTAT 1320 AAGTGAAAGC CTCTCAAAGT TGAACCTTGA TGAAGACAAA ATCGCAACAA AGACCACCTC 1380 AAGTAATGTA ATGGTTGAAG GTCCAACTGA TTCAGTTGAA CCACAAAATG ATGGATCTGC 1440 TGCGGTGTCA ACTGAAGGAA TATCATCTCT ATCTTCTACT TGGAGATCAG AACTGTCAAA 1500 AGTATATGTT TGGTATGCCA GCTTTGGTTC AAACATGTGG ACACCAAGGT TTCTGTGCTA 1560 CATCCAAGGG GGAAAGGCTG AGGGTATGAA TATACCATGT TTTGGATCTC ATGACACAAG 1620 CCCACCAAGA GGTTCCATGT GGAAGACTGT GCCTCATAGA TTGTTTTTTG GTAGATCCTC 1680 TACTCCTTGC TGGGGAACTG GTGGTGTTGC TTTTCTCAAC CCTGAGATAA ACCACACTGA 1740 GAACTCCTAT GTCTGCATGT ATAAAATAAC GCTCGAGCAG TTCAATGATG TATTGTTTCA 1800 AGAGAATCGT TTAGTGAAGG AGAACGGCGA AAGTGGAAAA ACTGAGTCTC CTGACTCTCC 1860 TTTGATTGGC TTGTCTGAAA TAGAGTTTGT TTCCAGAAAC AAGGGTGTCC ACCTTGCACC 1920 TATTAAGGAT AGCTGGTACT CCAATGTACT TTACCTTGGG GAGGAGGATA ACCTTCCAAT 1980 TCTTACAATG ACATGCCCGT CATCAGACGT AGAGCGATGC AGATCCGGAG AGCTGCCATT 2040 GTGTCCTCCA TCCAAGACCT ACTCCGCCAC CCTGATAAGG GGACTAATGG AAGGGAAGCA 2100 CCTGGATGCA GATGCGGCCG CTAAGTTGTA TGAGGTATGG GGTGCCGTGC TCAGGACTCA 2160 GGAGAGAGAC ACGATTTGTA CTGGACAGGT TAGGAGGTGT GGGGTGTCGT GCAACGGTGG 2220 CCGCGAACGC GAGGAGGTGT GGGTGTGGAA GGACGAACGG TGA
2264Nucleotide Fasta Sequence
>ONIVA07G19970.1|Class-I|Oryza nivara CGCTCCATTTCCGAATCGTCGTCTCGCCTCCACTTCAGACTTCCGAGTCGTCTCGCCTCGCCGGCGCAGGATGGCGGCGGCGACGACCGCCGCGGCGGCGGCGAGGGTGGGGCTGCTGTACGACGAGAGGATGTGCGCGCACGCGACGCCCGACGGGGAGGAGCACCCGGAGAACCCCGAGAGGCTGCGGGCCATCTGGCGCAAGCTCTCCGCCGACGGCGTCGCCTCCAGGTGCATGATCATGAAAGCGAAGGAAGCTGAGGACAAGTATATAGCTTCTGTCCATAGCCAGAACCATATCAAGCTGATGAGGAGTATCAGCTCAAAAGAATATGATTCCCGTCGAAACAAGATTGCTAGAAAATTTAATTCCATTTACTTCAACAAGGGCTCCTCAGAGTCTGCTTTTCTTGCAGCTGGTTCTGTGATTGAGGTAGCTGAGAAGGTTGCTGCAGGAGAGTTAAGTTCTGCTATTGCTCTAGTCCGACCTCCAGGTCACCATGCTGAACATAATGAGGCAATGGGTTTTTGCCTCTTCAACAATGTAGCAATTGCTGCTGATTATCTCTTAAATGAGAGGACTGACTTAGGTATCAAGAAGATATTGATTGTCGATTGGGATGTTCATCATGGAAATGGCACACAAAAGATGTTTTATAGTGATCCTCGTGTATTGTTCTTTTCAGTTCACAGATTTGATTATGGCAGCTTCTATCCTGCTGAAGGGGATGCATCTTACTGTTTCATTGGGGAAGGAGATGGTAAAGGGTACAACATTAATGTGCCCTGGGAACATGGAAAATGTGGTGATGCAGATTATATTGCTGCATGGGACCATGTACTACTTCCTGTTGCTGAAGCATTTAACCCTGATATAGTCTTGGTGTCTGCTGGGTTTGATGCAGCACTGGGTGATCCTCTTGGTGGCTGCTGCATCACTCCCAATGGATATGCTCTGCTACTGACAAAGCTCTTAGGTTTTGCCCAAGGGAGGATAGTGATGGCTCTTGAAGGAGGCTATAACCTTAGATCCATAGCAAATTCAGTTAGTGCTTGTGCTAAAGTTTTGTTGGGAGACAAGTTCAGATTTGACACTCCTGATATGCAACCGTTTGAATCTTCATGGAGAGTTATACAAGCGGTACGTGATGAATTGAAGACGTTCTGGCCTATTCTGAGTAATAGATTGCCAGAGAATATATCATTGAGGAGTAGGCCCTCACAAATTGAGCTGTATTCTTCTGGTTCTGACTCTGAAGTTGAAGATCTCCCTGATGCTATTGCTTCTGTCAATATTATTCAAATTACTGATGGTATTATAAGTGAAAGCCTCTCAAAGTTGAACCTTGATGAAGACAAAATCGCAACAAAGACCACCTCAAGTAATGTAATGGTTGAAGGTCCAACTGATTCAGTTGAACCACAAAATGATGGATCTGCTGCGGTGTCAACTGAAGGAATATCATCTCTATCTTCTACTTGGAGATCAGAACTGTCAAAAGTATATGTTTGGTATGCCAGCTTTGGTTCAAACATGTGGACACCAAGGTTTCTGTGCTACATCCAAGGGGGAAAGGCTGAGGGTATGAATATACCATGTTTTGGATCTCATGACACAAGCCCACCAAGAGGTTCCATGTGGAAGACTGTGCCTCATAGATTGTTTTTTGGTAGATCCTCTACTCCTTGCTGGGGAACTGGTGGTGTTGCTTTTCTCAACCCTGAGATAAACCACACTGAGAACTCCTATGTCTGCATGTATAAAATAACGCTCGAGCAGTTCAATGATGTATTGTTTCAAGAGAATCGTTTAGTGAAGGAGAACGGCGAAAGTGGAAAAACTGAGTCTCCTGACTCTCCTTTGATTGGCTTGTCTGAAATAGAGTTTGTTTCCAGAAACAAGGGTGTCCACCTTGCACCTATTAAGGATAGCTGGTACTCCAATGTACTTTACCTTGGGGAGGAGGATAACCTTCCAATTCTTACAATGACATGCCCGTCATCAGACGTAGAGCGATGCAGATCCGGAGAGCTGCCATTGTGTCCTCCATCCAAGACCTACTCCGCCACCCTGATAAGGGGACTAATGGAAGGGAAGCACCTGGATGCAGATGCGGCCGCTAAGTTGTATGAGGTATGGGGTGCCGTGCTCAGGACTCAGGAGAGAGACACGATTTGTACTGGACAGGTTAGGAGGTGTGGGGTGTCGTGCAACGGTGGCCGCGAACGCGAGGAGGTGTGGGTGTGGAAGGACGAACGGTGA
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |