Tag |
Content |
WERAM ID |
WERAM-Viv-0107 |
Ensembl Protein ID |
VIT_17s0000g07280.t01 |
Gene Name |
VIT_17s0000g07280 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
6.40e-127 |
423.8 |
14 |
333 |
HDAC |
Class-I |
3.70e-37 |
129.1 |
14 |
322 |
|
Organism |
Vitis vinifera |
Domain Profile |
HDAC Class-II
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletae.klekeelesltvd 88 +glvyd++m++h++ ++ hpE+p+Ri+ai+++l++ag+ ++++ ++a++a+++++++vHs++hv+l+++ + k+ +++ ++++++ VIT_17s0000g07280.t01 14 VGLVYDDRMCEHATADGDP--HPENPDRIRAIWKKLESAGIPQRCVVFNAKEAEDKHILSVHSNNHVNLIKNISsKQFDSRRNRIASK 99 689************9999..***************************************************998888999999**** PP class-2.txt 89 sdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklk.vkkilivDwDvHhG 175 ++siy+++ s++aa la+G+v+e++++v+kgel+ +fa+vRPPGHHae++++mGFCl+nnva+a++ l+++ + +kkilivDwDvHhG VIT_17s0000g07280.t01 100 FNSIYMNEGSSEAAYLAAGSVIEVAERVAKGELSSAFAIVRPPGHHAEQNEPMGFCLYNNVAIATSFLLNERPdIKKILIVDWDVHHG 187 ******************************************************************99998877************** PP class-2.txt 176 nGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGf 263 nGtq++f+kdp+vl++S+HR++ gsf+p+ ++g + +geg+g g+n+Nv+w++g +gda+yla+++++++p+ak+F+Pd+v++saGf VIT_17s0000g07280.t01 188 NGTQKMFWKDPRVLFFSVHRHEFGSFYPANDEGFYAMTGEGPGAGYNINVPWENGRCGDADYLAVWDHILIPVAKDFNPDIVIISAGF 275 **************************************************************************************** PP class-2.txt 264 DaaegdplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLl 321 Daa gdplgg++vt+ +y+ + k+l+++++g+++++lEGGynl ++a++v a+v++Ll VIT_17s0000g07280.t01 276 DAAIGDPLGGCHVTPYGYSVMLKKLMEFSEGKIIMALEGGYNLVSLANSVLACVEVLL 333 ********************************************************98 PP
HDAC Class-I
class-1.txt 3 vayaydedvgeyhy..gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeels.kelkkfn 87 v +yd+++ e+ + g+ hp p r++ + + + + g+ ++ ++++k+a+ +++l++hs+++++++k++++++ ++ + +kfn VIT_17s0000g07280.t01 14 VGLVYDDRMCEHATadGDPHPENPDRIRAIWKKLESAGIPQRCVVFNAKEAEDKHILSVHSNNHVNLIKNISSKQFDSRRnRIASKFN 101 5667888888876633677999***************************************************999876625667888 PP class-1.txt 88 vgedcPvfdglfeycqlitGasleaakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellk...khkrvlyididlh 170 + +g e + l +G+ +e a+++ k+e ai G hha ++e Gfc n++ +a ll k++l +d d+h VIT_17s0000g07280.t01 102 S---IYMNEGSSEAAYLAAGSVIEVAERVAKGELSsaFAIVRPPG-HHAEQNEPMGFCLYNNVAIATSFLLNerpDIKKILIVDWDVH 185 4...557899999999**************998661155655555.*******************9988876444789********** PP class-1.txt 171 hGDgveeafyttdrvmtvsfhkyg.eeffPgt..GdlsdvgaekgkyyavnvPlkdg.idDesyekifksviskvieafePeavvlqc 254 hG+g ++ f + rv+ s+h+++ +f+P+ G +g++ g y +nvP ++g + D y ++ +++ +v + f+P++v++ VIT_17s0000g07280.t01 186 HGNGTQKMFWKDPRVLFFSVHRHEfGSFYPANdeGFYAMTGEGPGAGYNINVPWENGrCGDADYLAVWDHILIPVAKDFNPDIVIISA 273 ********************987633599*86336678899999999********99899**************************** PP class-1.txt 255 GaDslagDrlgefnlsikghaecvkfvksf.nlpllvlGGGGYtlrnva 302 G D+ gD+lg +++ g++ ++k + +f + ++++ GGY+l +a VIT_17s0000g07280.t01 274 GFDAAIGDPLGGCHVTPYGYSVMLKKLMEFsEGKIIMALEGGYNLVSLA 322 ******************************7778888899****98776 PP
|
Protein Sequence (Fasta) | MEVNSEKGDR RRRVGLVYDD RMCEHATADG DPHPENPDRI RAIWKKLESA GIPQRCVVFN 60 AKEAEDKHIL SVHSNNHVNL IKNISSKQFD SRRNRIASKF NSIYMNEGSS EAAYLAAGSV 120 IEVAERVAKG ELSSAFAIVR PPGHHAEQNE PMGFCLYNNV AIATSFLLNE RPDIKKILIV 180 DWDVHHGNGT QKMFWKDPRV LFFSVHRHEF GSFYPANDEG FYAMTGEGPG AGYNINVPWE 240 NGRCGDADYL AVWDHILIPV AKDFNPDIVI ISAGFDAAIG DPLGGCHVTP YGYSVMLKKL 300 MEFSEGKIIM ALEGGYNLVS LANSVLACVE VLLEDKPIAG SSEAYPFEST WRVIQAVRQE 360 LSAFWPTLAD ELPKKLTSCK ASPLQLLVAS SDSEDESDID LHIRAENLEA VVQDGLSKLK 420 VDEDSHDLVA TWRSELSKID VWYASFGSNM WKSRFLCYIE GGQLEGMEKR CSGSVDRNPP 480 KEIMWKTVPH RLFFGRDHSS TWGPGGVAFL NPEENNQDRA YICLYRITLE QFNDVLLQEN 540 ASSYDISSPL FDLVALNSIA DKQSISVEFK SGWYRSVLYL GKECDIPILT LTCPLSDVEA 600 FKSGDLPMSA PSKEYANTII RGLTEGKQLS EEEAIAYIQE ASTKPL 646Protein Fasta Sequence
>VIT_17s0000g07280.t01|Class-I|Vitis vinifera MEVNSEKGDRRRRVGLVYDDRMCEHATADGDPHPENPDRIRAIWKKLESAGIPQRCVVFNAKEAEDKHILSVHSNNHVNLIKNISSKQFDSRRNRIASKFNSIYMNEGSSEAAYLAAGSVIEVAERVAKGELSSAFAIVRPPGHHAEQNEPMGFCLYNNVAIATSFLLNERPDIKKILIVDWDVHHGNGTQKMFWKDPRVLFFSVHRHEFGSFYPANDEGFYAMTGEGPGAGYNINVPWENGRCGDADYLAVWDHILIPVAKDFNPDIVIISAGFDAAIGDPLGGCHVTPYGYSVMLKKLMEFSEGKIIMALEGGYNLVSLANSVLACVEVLLEDKPIAGSSEAYPFESTWRVIQAVRQELSAFWPTLADELPKKLTSCKASPLQLLVASSDSEDESDIDLHIRAENLEAVVQDGLSKLKVDEDSHDLVATWRSELSKIDVWYASFGSNMWKSRFLCYIEGGQLEGMEKRCSGSVDRNPPKEIMWKTVPHRLFFGRDHSSTWGPGGVAFLNPEENNQDRAYICLYRITLEQFNDVLLQENASSYDISSPLFDLVALNSIADKQSISVEFKSGWYRSVLYLGKECDIPILTLTCPLSDVEAFKSGDLPMSAPSKEYANTIIRGLTEGKQLSEEEAIAYIQEASTKPL
|
Nucleotide Sequence (Fasta) | AGAGATAGGG CATGGAGGTG AACTCCGAGA AAGGCGATCG TCGGCGACGC GTGGGCCTCG 60 TCTACGATGA TCGTATGTGT GAGCATGCCA CAGCAGATGG TGATCCTCAC CCCGAGAATC 120 CCGATCGGAT TAGGGCCATC TGGAAGAAGC TCGAAAGCGC TGGAATTCCT CAGAGATGTG 180 TGGTTTTCAA TGCTAAAGAA GCAGAAGATA AACATATACT ATCAGTTCAC AGCAATAATC 240 ATGTCAATTT GATTAAAAAC ATTAGCTCCA AACAATTTGA TTCAAGAAGA AATAGGATTG 300 CGTCAAAGTT TAATTCCATC TATATGAATG AAGGCTCATC GGAGGCTGCT TATCTTGCTG 360 CTGGCTCTGT GATTGAGGTT GCTGAGAGGG TCGCCAAAGG GGAGTTGAGT TCTGCTTTTG 420 CCATTGTTAG GCCTCCTGGA CATCATGCAG AGCAAAATGA GCCAATGGGA TTTTGTCTAT 480 ACAACAATGT GGCTATTGCA ACAAGTTTTC TCTTGAATGA AAGACCGGAC ATTAAAAAAA 540 TCCTGATTGT TGATTGGGAT GTTCATCATG GTAATGGCAC TCAAAAGATG TTCTGGAAGG 600 ATCCTCGAGT TCTATTTTTT TCTGTTCATA GGCATGAGTT TGGGAGTTTT TATCCCGCAA 660 ACGATGAAGG TTTTTATGCT ATGACTGGAG AAGGACCAGG TGCTGGATAC AATATAAATG 720 TTCCTTGGGA GAATGGACGA TGTGGTGATG CTGATTATCT CGCCGTTTGG GACCATATAT 780 TAATTCCTGT TGCCAAGGAT TTTAATCCAG ACATTGTTAT AATCTCTGCA GGATTTGATG 840 CAGCAATTGG TGATCCCTTG GGGGGGTGTC ATGTCACACC ATATGGATAT TCTGTTATGT 900 TGAAAAAGCT GATGGAGTTT TCTGAAGGAA AGATTATAAT GGCATTAGAA GGTGGATACA 960 ATCTTGTCTC TTTAGCAAAT TCAGTTCTTG CATGTGTTGA GGTTTTGCTA GAAGACAAGC 1020 CTATTGCTGG ATCTTCAGAG GCCTATCCAT TCGAGTCAAC ATGGCGTGTA ATACAAGCAG 1080 TTCGCCAAGA ATTGAGTGCA TTCTGGCCAA CTCTTGCAGA TGAATTACCA AAGAAGCTAA 1140 CCAGTTGTAA AGCATCTCCA CTTCAGCTTC TGGTCGCAAG CTCTGATTCT GAAGATGAAA 1200 GTGACATAGA TCTGCATATT AGAGCAGAAA ATCTTGAGGC AGTTGTTCAG GATGGCCTTT 1260 CAAAACTGAA AGTTGATGAA GATAGTCATG ATCTGGTGGC CACCTGGAGA TCAGAGTTGT 1320 CAAAAATTGA TGTTTGGTAT GCCTCTTTTG GATCGAATAT GTGGAAATCA AGATTTCTGT 1380 GCTACATTGA AGGTGGACAG TTGGAAGGTA TGGAAAAGCG ATGTTCCGGT TCAGTGGATA 1440 GAAACCCACC AAAAGAGATT ATGTGGAAGA CTGTCCCTCA TCGTTTATTC TTTGGTCGTG 1500 ATCATTCCAG CACATGGGGT CCTGGAGGGG TTGCTTTCCT TAATCCTGAA GAAAACAATC 1560 AGGACAGAGC TTACATTTGC CTATATAGAA TTACTCTTGA ACAGTTCAAC GATGTTCTGC 1620 TTCAGGAGAA TGCTTCAAGT TATGACATCA GTTCTCCTTT GTTTGATTTA GTGGCTTTAA 1680 ACTCTATTGC TGACAAACAG TCTATCTCTG TGGAGTTCAA GTCGGGCTGG TATCGTAGCG 1740 TCCTTTATTT GGGAAAGGAG TGTGATATTC CAATTCTGAC TCTCACATGC CCACTTTCAG 1800 ATGTTGAGGC CTTCAAATCG GGAGACCTTC CCATGAGTGC TCCAAGCAAA GAATATGCCA 1860 ACACCATAAT AAGAGGCCTG ACAGAAGGAA AACAGCTCTC AGAAGAAGAA GCCATTGCTT 1920 ACATACAGGA AGCTTCTACA AAGCCATTGT GATTTCCACC CCTAAACCCT TCGCCTGCTT 1980 TGTTTCCTGA AGACCATTTG AAGGAAATCA GCTTGCAAAT ATGGGTAAAA CCCTTTGATG 2040 GTATTAAAAT TATGATGTGC TTGCTGTGAT AGTATTAAAA TTATGATATG CTCCCCTTTA 2100 GTAAATTCTC TGTACAATAT GATGATGCAG TTAATATTAT TCTAATTTGC TTATAA
2157Nucleotide Fasta Sequence
>VIT_17s0000g07280.t01|Class-I|Vitis vinifera AGAGATAGGGCATGGAGGTGAACTCCGAGAAAGGCGATCGTCGGCGACGCGTGGGCCTCGTCTACGATGATCGTATGTGTGAGCATGCCACAGCAGATGGTGATCCTCACCCCGAGAATCCCGATCGGATTAGGGCCATCTGGAAGAAGCTCGAAAGCGCTGGAATTCCTCAGAGATGTGTGGTTTTCAATGCTAAAGAAGCAGAAGATAAACATATACTATCAGTTCACAGCAATAATCATGTCAATTTGATTAAAAACATTAGCTCCAAACAATTTGATTCAAGAAGAAATAGGATTGCGTCAAAGTTTAATTCCATCTATATGAATGAAGGCTCATCGGAGGCTGCTTATCTTGCTGCTGGCTCTGTGATTGAGGTTGCTGAGAGGGTCGCCAAAGGGGAGTTGAGTTCTGCTTTTGCCATTGTTAGGCCTCCTGGACATCATGCAGAGCAAAATGAGCCAATGGGATTTTGTCTATACAACAATGTGGCTATTGCAACAAGTTTTCTCTTGAATGAAAGACCGGACATTAAAAAAATCCTGATTGTTGATTGGGATGTTCATCATGGTAATGGCACTCAAAAGATGTTCTGGAAGGATCCTCGAGTTCTATTTTTTTCTGTTCATAGGCATGAGTTTGGGAGTTTTTATCCCGCAAACGATGAAGGTTTTTATGCTATGACTGGAGAAGGACCAGGTGCTGGATACAATATAAATGTTCCTTGGGAGAATGGACGATGTGGTGATGCTGATTATCTCGCCGTTTGGGACCATATATTAATTCCTGTTGCCAAGGATTTTAATCCAGACATTGTTATAATCTCTGCAGGATTTGATGCAGCAATTGGTGATCCCTTGGGGGGGTGTCATGTCACACCATATGGATATTCTGTTATGTTGAAAAAGCTGATGGAGTTTTCTGAAGGAAAGATTATAATGGCATTAGAAGGTGGATACAATCTTGTCTCTTTAGCAAATTCAGTTCTTGCATGTGTTGAGGTTTTGCTAGAAGACAAGCCTATTGCTGGATCTTCAGAGGCCTATCCATTCGAGTCAACATGGCGTGTAATACAAGCAGTTCGCCAAGAATTGAGTGCATTCTGGCCAACTCTTGCAGATGAATTACCAAAGAAGCTAACCAGTTGTAAAGCATCTCCACTTCAGCTTCTGGTCGCAAGCTCTGATTCTGAAGATGAAAGTGACATAGATCTGCATATTAGAGCAGAAAATCTTGAGGCAGTTGTTCAGGATGGCCTTTCAAAACTGAAAGTTGATGAAGATAGTCATGATCTGGTGGCCACCTGGAGATCAGAGTTGTCAAAAATTGATGTTTGGTATGCCTCTTTTGGATCGAATATGTGGAAATCAAGATTTCTGTGCTACATTGAAGGTGGACAGTTGGAAGGTATGGAAAAGCGATGTTCCGGTTCAGTGGATAGAAACCCACCAAAAGAGATTATGTGGAAGACTGTCCCTCATCGTTTATTCTTTGGTCGTGATCATTCCAGCACATGGGGTCCTGGAGGGGTTGCTTTCCTTAATCCTGAAGAAAACAATCAGGACAGAGCTTACATTTGCCTATATAGAATTACTCTTGAACAGTTCAACGATGTTCTGCTTCAGGAGAATGCTTCAAGTTATGACATCAGTTCTCCTTTGTTTGATTTAGTGGCTTTAAACTCTATTGCTGACAAACAGTCTATCTCTGTGGAGTTCAAGTCGGGCTGGTATCGTAGCGTCCTTTATTTGGGAAAGGAGTGTGATATTCCAATTCTGACTCTCACATGCCCACTTTCAGATGTTGAGGCCTTCAAATCGGGAGACCTTCCCATGAGTGCTCCAAGCAAAGAATATGCCAACACCATAATAAGAGGCCTGACAGAAGGAAAACAGCTCTCAGAAGAAGAAGCCATTGCTTACATACAGGAAGCTTCTACAAAGCCATTGTGATTTCCACCCCTAAACCCTTCGCCTGCTTTGTTTCCTGAAGACCATTTGAAGGAAATCAGCTTGCAAATATGGGTAAAACCCTTTGATGGTATTAAAATTATGATGTGCTTGCTGTGATAGTATTAAAATTATGATATGCTCCCCTTTAGTAAATTCTCTGTACAATATGATGATGCAGTTAATATTATTCTAATTTGCTTATAA
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |