WERAM Information


Tag Content
WERAM ID WERAM-Viv-0107
Ensembl Protein ID VIT_17s0000g07280.t01
Gene Name VIT_17s0000g07280
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
VIT_17s0000g07280 VIT_17s0000g07280.t01 VIT_17s0000g07280.t01
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 6.40e-127 423.8 14 333
HDAC Class-I 3.70e-37 129.1 14 322
Organism Vitis vinifera
Domain Profile
  HDAC Class-II

            class-2.txt   2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletae.klekeelesltvd 88 
+glvyd++m++h++ ++ hpE+p+Ri+ai+++l++ag+ ++++ ++a++a+++++++vHs++hv+l+++ + k+ +++ ++++++
VIT_17s0000g07280.t01 14 VGLVYDDRMCEHATADGDP--HPENPDRIRAIWKKLESAGIPQRCVVFNAKEAEDKHILSVHSNNHVNLIKNISsKQFDSRRNRIASK 99
689************9999..***************************************************998888999999**** PP
class-2.txt 89 sdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklk.vkkilivDwDvHhG 175
++siy+++ s++aa la+G+v+e++++v+kgel+ +fa+vRPPGHHae++++mGFCl+nnva+a++ l+++ + +kkilivDwDvHhG
VIT_17s0000g07280.t01 100 FNSIYMNEGSSEAAYLAAGSVIEVAERVAKGELSSAFAIVRPPGHHAEQNEPMGFCLYNNVAIATSFLLNERPdIKKILIVDWDVHHG 187
******************************************************************99998877************** PP
class-2.txt 176 nGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGf 263
nGtq++f+kdp+vl++S+HR++ gsf+p+ ++g + +geg+g g+n+Nv+w++g +gda+yla+++++++p+ak+F+Pd+v++saGf
VIT_17s0000g07280.t01 188 NGTQKMFWKDPRVLFFSVHRHEFGSFYPANDEGFYAMTGEGPGAGYNINVPWENGRCGDADYLAVWDHILIPVAKDFNPDIVIISAGF 275
**************************************************************************************** PP
class-2.txt 264 DaaegdplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLl 321
Daa gdplgg++vt+ +y+ + k+l+++++g+++++lEGGynl ++a++v a+v++Ll
VIT_17s0000g07280.t01 276 DAAIGDPLGGCHVTPYGYSVMLKKLMEFSEGKIIMALEGGYNLVSLANSVLACVEVLL 333
********************************************************98 PP

  HDAC Class-I

            class-1.txt   3 vayaydedvgeyhy..gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeels.kelkkfn 87 
v +yd+++ e+ + g+ hp p r++ + + + + g+ ++ ++++k+a+ +++l++hs+++++++k++++++ ++ + +kfn
VIT_17s0000g07280.t01 14 VGLVYDDRMCEHATadGDPHPENPDRIRAIWKKLESAGIPQRCVVFNAKEAEDKHILSVHSNNHVNLIKNISSKQFDSRRnRIASKFN 101
5667888888876633677999***************************************************999876625667888 PP
class-1.txt 88 vgedcPvfdglfeycqlitGasleaakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellk...khkrvlyididlh 170
+ +g e + l +G+ +e a+++ k+e ai G hha ++e Gfc n++ +a ll k++l +d d+h
VIT_17s0000g07280.t01 102 S---IYMNEGSSEAAYLAAGSVIEVAERVAKGELSsaFAIVRPPG-HHAEQNEPMGFCLYNNVAIATSFLLNerpDIKKILIVDWDVH 185
4...557899999999**************998661155655555.*******************9988876444789********** PP
class-1.txt 171 hGDgveeafyttdrvmtvsfhkyg.eeffPgt..GdlsdvgaekgkyyavnvPlkdg.idDesyekifksviskvieafePeavvlqc 254
hG+g ++ f + rv+ s+h+++ +f+P+ G +g++ g y +nvP ++g + D y ++ +++ +v + f+P++v++
VIT_17s0000g07280.t01 186 HGNGTQKMFWKDPRVLFFSVHRHEfGSFYPANdeGFYAMTGEGPGAGYNINVPWENGrCGDADYLAVWDHILIPVAKDFNPDIVIISA 273
********************987633599*86336678899999999********99899**************************** PP
class-1.txt 255 GaDslagDrlgefnlsikghaecvkfvksf.nlpllvlGGGGYtlrnva 302
G D+ gD+lg +++ g++ ++k + +f + ++++ GGY+l +a
VIT_17s0000g07280.t01 274 GFDAAIGDPLGGCHVTPYGYSVMLKKLMEFsEGKIIMALEGGYNLVSLA 322
******************************7778888899****98776 PP

Protein Sequence
(Fasta)
MEVNSEKGDR RRRVGLVYDD RMCEHATADG DPHPENPDRI RAIWKKLESA GIPQRCVVFN 60
AKEAEDKHIL SVHSNNHVNL IKNISSKQFD SRRNRIASKF NSIYMNEGSS EAAYLAAGSV 120
IEVAERVAKG ELSSAFAIVR PPGHHAEQNE PMGFCLYNNV AIATSFLLNE RPDIKKILIV 180
DWDVHHGNGT QKMFWKDPRV LFFSVHRHEF GSFYPANDEG FYAMTGEGPG AGYNINVPWE 240
NGRCGDADYL AVWDHILIPV AKDFNPDIVI ISAGFDAAIG DPLGGCHVTP YGYSVMLKKL 300
MEFSEGKIIM ALEGGYNLVS LANSVLACVE VLLEDKPIAG SSEAYPFEST WRVIQAVRQE 360
LSAFWPTLAD ELPKKLTSCK ASPLQLLVAS SDSEDESDID LHIRAENLEA VVQDGLSKLK 420
VDEDSHDLVA TWRSELSKID VWYASFGSNM WKSRFLCYIE GGQLEGMEKR CSGSVDRNPP 480
KEIMWKTVPH RLFFGRDHSS TWGPGGVAFL NPEENNQDRA YICLYRITLE QFNDVLLQEN 540
ASSYDISSPL FDLVALNSIA DKQSISVEFK SGWYRSVLYL GKECDIPILT LTCPLSDVEA 600
FKSGDLPMSA PSKEYANTII RGLTEGKQLS EEEAIAYIQE ASTKPL 646
Nucleotide Sequence
(Fasta)
AGAGATAGGG CATGGAGGTG AACTCCGAGA AAGGCGATCG TCGGCGACGC GTGGGCCTCG 60
TCTACGATGA TCGTATGTGT GAGCATGCCA CAGCAGATGG TGATCCTCAC CCCGAGAATC 120
CCGATCGGAT TAGGGCCATC TGGAAGAAGC TCGAAAGCGC TGGAATTCCT CAGAGATGTG 180
TGGTTTTCAA TGCTAAAGAA GCAGAAGATA AACATATACT ATCAGTTCAC AGCAATAATC 240
ATGTCAATTT GATTAAAAAC ATTAGCTCCA AACAATTTGA TTCAAGAAGA AATAGGATTG 300
CGTCAAAGTT TAATTCCATC TATATGAATG AAGGCTCATC GGAGGCTGCT TATCTTGCTG 360
CTGGCTCTGT GATTGAGGTT GCTGAGAGGG TCGCCAAAGG GGAGTTGAGT TCTGCTTTTG 420
CCATTGTTAG GCCTCCTGGA CATCATGCAG AGCAAAATGA GCCAATGGGA TTTTGTCTAT 480
ACAACAATGT GGCTATTGCA ACAAGTTTTC TCTTGAATGA AAGACCGGAC ATTAAAAAAA 540
TCCTGATTGT TGATTGGGAT GTTCATCATG GTAATGGCAC TCAAAAGATG TTCTGGAAGG 600
ATCCTCGAGT TCTATTTTTT TCTGTTCATA GGCATGAGTT TGGGAGTTTT TATCCCGCAA 660
ACGATGAAGG TTTTTATGCT ATGACTGGAG AAGGACCAGG TGCTGGATAC AATATAAATG 720
TTCCTTGGGA GAATGGACGA TGTGGTGATG CTGATTATCT CGCCGTTTGG GACCATATAT 780
TAATTCCTGT TGCCAAGGAT TTTAATCCAG ACATTGTTAT AATCTCTGCA GGATTTGATG 840
CAGCAATTGG TGATCCCTTG GGGGGGTGTC ATGTCACACC ATATGGATAT TCTGTTATGT 900
TGAAAAAGCT GATGGAGTTT TCTGAAGGAA AGATTATAAT GGCATTAGAA GGTGGATACA 960
ATCTTGTCTC TTTAGCAAAT TCAGTTCTTG CATGTGTTGA GGTTTTGCTA GAAGACAAGC 1020
CTATTGCTGG ATCTTCAGAG GCCTATCCAT TCGAGTCAAC ATGGCGTGTA ATACAAGCAG 1080
TTCGCCAAGA ATTGAGTGCA TTCTGGCCAA CTCTTGCAGA TGAATTACCA AAGAAGCTAA 1140
CCAGTTGTAA AGCATCTCCA CTTCAGCTTC TGGTCGCAAG CTCTGATTCT GAAGATGAAA 1200
GTGACATAGA TCTGCATATT AGAGCAGAAA ATCTTGAGGC AGTTGTTCAG GATGGCCTTT 1260
CAAAACTGAA AGTTGATGAA GATAGTCATG ATCTGGTGGC CACCTGGAGA TCAGAGTTGT 1320
CAAAAATTGA TGTTTGGTAT GCCTCTTTTG GATCGAATAT GTGGAAATCA AGATTTCTGT 1380
GCTACATTGA AGGTGGACAG TTGGAAGGTA TGGAAAAGCG ATGTTCCGGT TCAGTGGATA 1440
GAAACCCACC AAAAGAGATT ATGTGGAAGA CTGTCCCTCA TCGTTTATTC TTTGGTCGTG 1500
ATCATTCCAG CACATGGGGT CCTGGAGGGG TTGCTTTCCT TAATCCTGAA GAAAACAATC 1560
AGGACAGAGC TTACATTTGC CTATATAGAA TTACTCTTGA ACAGTTCAAC GATGTTCTGC 1620
TTCAGGAGAA TGCTTCAAGT TATGACATCA GTTCTCCTTT GTTTGATTTA GTGGCTTTAA 1680
ACTCTATTGC TGACAAACAG TCTATCTCTG TGGAGTTCAA GTCGGGCTGG TATCGTAGCG 1740
TCCTTTATTT GGGAAAGGAG TGTGATATTC CAATTCTGAC TCTCACATGC CCACTTTCAG 1800
ATGTTGAGGC CTTCAAATCG GGAGACCTTC CCATGAGTGC TCCAAGCAAA GAATATGCCA 1860
ACACCATAAT AAGAGGCCTG ACAGAAGGAA AACAGCTCTC AGAAGAAGAA GCCATTGCTT 1920
ACATACAGGA AGCTTCTACA AAGCCATTGT GATTTCCACC CCTAAACCCT TCGCCTGCTT 1980
TGTTTCCTGA AGACCATTTG AAGGAAATCA GCTTGCAAAT ATGGGTAAAA CCCTTTGATG 2040
GTATTAAAAT TATGATGTGC TTGCTGTGAT AGTATTAAAA TTATGATATG CTCCCCTTTA 2100
GTAAATTCTC TGTACAATAT GATGATGCAG TTAATATTAT TCTAATTTGC TTATAA 2157
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Thc-0031 EOY22062 Theobroma cacao 72 0.0 988
WERAM-Pot-0045 POPTR_0004s09180.1 Populus trichocarpa 71 0.0 945
WERAM-Glm-0045 GLYMA05G00460.1 Glycine max 69 0.0 917
WERAM-Bro-0134 Bo7g098310.1 Brassica oleracea 66 0.0 892
WERAM-Brr-0068 Bra012984.1-P Brassica rapa 65 0.0 881
WERAM-Art-0146 AT5G61060.1 Arabidopsis thaliana 65 0.0 877
WERAM-Arl-0149 scaffold_802745.1 Arabidopsis lyrata 65 0.0 874
WERAM-Sol-0055 Solyc03g115150.2.1 Solanum lycopersicum 65 0.0 864
WERAM-Mua-0066 GSMUA_Achr4P03250_001 Musa acuminata 63 0.0 863
WERAM-Met-0112 KEH32016 Medicago truncatula 65 0.0 861
WERAM-Prp-0049 EMJ12067 Prunus persica 76 0.0 842
WERAM-Orgl-0076 OGLUM07G21150.1 Oryza glumaepatula 57 0.0 803
WERAM-Ori-0088 BGIOSGA026083-PA Oryza indica 57 0.0 803
WERAM-Ors-0072 OS07T0602200-01 Oryza sativa 57 0.0 802
WERAM-Orr-0082 ORUFI07G22240.1 Oryza rufipogon 57 0.0 802
WERAM-Org-0078 ORGLA07G0164500.1 Oryza glaberrima 57 0.0 799
WERAM-Orbr-0087 OB07G26850.1 Oryza brachyantha 57 0.0 794
WERAM-Orni-0078 ONIVA07G19970.1 Oryza nivara 58 0.0 793
WERAM-Tra-0099 Traes_2DS_DFCAF1EA5.1 Triticum aestivum 58 0.0 789
WERAM-Lep-0079 LPERR07G18450.1 Leersia perrieri 57 0.0 782
WERAM-Sob-0036 Sb02g038550.1 Sorghum bicolor 55 0.0 779
WERAM-Sei-0109 Si029091m Setaria italica 58 0.0 776
WERAM-Zem-0143 GRMZM2G457889_P01 Zea mays 56 0.0 770
WERAM-Orp-0076 OPUNC07G19850.1 Oryza punctata 58 0.0 760
WERAM-Brd-0010 BRADI1G22240.1 Brachypodium distachyon 55 0.0 743
WERAM-Aet-0088 EMT31322 Aegilops tauschii 57 0.0 720
WERAM-Orl-0040 KN538895.1_FGP007 Oryza longistaminata 58 0.0 704
WERAM-Orb-0079 OBART07G21300.1 Oryza barthii 59 0.0 688
WERAM-Amt-0091 ERM99985 Amborella trichopoda 55 0.0 672
WERAM-Sem-0010 EFJ19764 Selaginella moellendorffii 48 6e-175 611
WERAM-Tru-0053 TRIUR3_22556-P1 Triticum urartu 47 4e-141 499
WERAM-Hov-0018 MLOC_16422.1 Hordeum vulgare 68 7e-141 498
WERAM-Php-0085 PP1S34_252V6.1 Physcomitrella patens 54 9e-118 421
WERAM-Ran-0201 ENSRNOP00000063689.2 Rattus norvegicus 44 1e-87 321
WERAM-Ocp-0057 ENSOPRP00000005096.1 Ochotona princeps 43 1e-86 318
WERAM-Aim-0139 ENSAMEP00000013236.1 Ailuropoda melanoleuca 43 2e-86 317
WERAM-Mup-0158 ENSMPUP00000013557.1 Mustela putorius furo 43 4e-86 316
WERAM-Mum-0115 ENSMUSP00000033501.8 Mus musculus 44 5e-86 316
WERAM-Eqc-0001 ENSECAP00000001121.1 Equus caballus 42 6e-86 316
WERAM-Myl-0104 ENSMLUP00000008295.2 Myotis lucifugus 43 2e-85 314
WERAM-Orc-0102 ENSOCUP00000008741.3 Oryctolagus cuniculus 42 3e-85 313
WERAM-Fec-0031 ENSFCAP00000002366.3 Felis catus 42 4e-85 313
WERAM-Ict-0125 ENSSTOP00000012693.2 Ictidomys tridecemlineatus 42 5e-85 313
WERAM-Caf-0161 ENSCAFP00000022990.3 Canis familiaris 42 5e-84 309
WERAM-Dio-0075 ENSDORP00000007462.1 Dipodomys ordii 41 1e-83 308
WERAM-Xet-0155 ENSXETP00000050501.3 Xenopus tropicalis 42 4e-83 306
WERAM-Hos-0047 ENSP00000365804.2 Homo sapiens 45 5e-83 306
WERAM-Ten-0019 ENSTNIP00000004593.1 Tetraodon nigroviridis 42 5e-83 306
WERAM-Chs-0158 ENSCSAP00000009365.1 Chlorocebus sabaeus 45 6e-83 305
WERAM-Gog-0047 ENSGGOP00000004443.2 Gorilla gorilla 45 7e-83 305
WERAM-Mam-0153 ENSMMUP00000021637.2 Macaca mulatta 45 8e-83 305
WERAM-Dar-0023 ENSDARP00000124246.1 Danio rerio 41 8e-83 305
WERAM-Pof-0022 ENSPFOP00000001799.2 Poecilia formosa 40 9e-83 305
WERAM-Cap-0109 ENSCPOP00000008049.2 Cavia porcellus 45 9e-83 305
WERAM-Paa-0049 ENSPANP00000006915.1 Papio anubis 45 1e-82 305
WERAM-Tar-0042 ENSTRUP00000010127.1 Takifugu rubripes 44 1e-82 305
WERAM-Dan-0022 ENSDNOP00000002136.3 Dasypus novemcinctus 44 3e-82 303
WERAM-Orn-0011 ENSONIP00000001061.1 Oreochromis niloticus 41 4e-82 303
WERAM-Caj-0022 ENSCJAP00000004409.2 Callithrix jacchus 44 7e-82 302
WERAM-Loa-0047 ENSLAFP00000003196.3 Loxodonta africana 44 8e-82 302
WERAM-Caa-0034 KGT64501 Candida albicans 42 9e-82 301
WERAM-Xim-0160 ENSXMAP00000013063.1 Xiphophorus maculatus 42 1e-81 301
WERAM-Asm-0181 ENSAMXP00000017644.1 Astyanax mexicanus 40 2e-81 301
WERAM-Lem-0023 CBX90551 Leptosphaeria maculans 42 3e-81 300
WERAM-Kop-0012 CAY68916 Komagataella pastoris 43 5e-81 299
WERAM-Mod-0081 ENSMODP00000012731.2 Monodelphis domestica 42 6e-81 299
WERAM-Otg-0144 ENSOGAP00000012420.2 Otolemur garnettii 42 1e-80 298
WERAM-Mae-0111 ENSMEUP00000010640.1 Macropus eugenii 45 1e-80 298
WERAM-Sus-0177 ENSSSCP00000022636.1 Sus scrofa 45 2e-80 298
WERAM-Pem-0058 ENSPMAP00000006830.1 Petromyzon marinus 40 2e-80 297
WERAM-Ova-0124 ENSOARP00000012678.1 Ovis aries 42 6e-80 296
WERAM-Tum-0026 CAZ84932 Tuber melanosporum 41 2e-79 294
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 39 3e-79 293
WERAM-Pytr-0015 EDU46537 Pyrenophora triticirepentis 42 3e-79 293
WERAM-Lac-0055 ENSLACP00000007918.1 Latimeria chalumnae 44 4e-79 293
WERAM-Anc-0082 ENSACAP00000007918.3 Anolis carolinensis 41 5e-79 293
WERAM-Crn-0010 AAW42071 Cryptococcus neoformans 43 9e-79 292
WERAM-Yal-0023 CAG79971 Yarrowia lipolytica 40 1e-78 291
WERAM-Ptv-0077 ENSPVAP00000007213.1 Pteropus vampyrus 43 2e-78 291
WERAM-Prc-0036 ENSPCAP00000003334.1 Procavia capensis 43 5e-78 289
WERAM-Mao-0002 MGG_01076T0 Magnaporthe oryzae 40 6e-78 289
WERAM-Orla-0013 ENSORLP00000001341.1 Oryzias latipes 41 6e-78 289
WERAM-Kll-0020 CAG99415 Kluyveromyces lactis 39 9e-78 288
WERAM-Scp-0036 SPBC800.03.1:pep Schizosaccharomyces pombe 41 9e-78 288
WERAM-Pyt-0023 EFQ89752 Pyrenophora teres 41 9e-78 288
WERAM-Bot-0122 ENSBTAP00000017618.5 Bos taurus 44 2e-77 288
WERAM-Tut-0056 ENSTTRP00000004443.1 Tursiops truncatus 44 2e-77 287
WERAM-Spr-0021 CBQ72644 Sporisorium reilianum 42 1e-76 285
WERAM-Scj-0031 EEB08679 Schizosaccharomyces japonicus 40 1e-76 285
WERAM-Usm-0012 UM02102P0 Ustilago maydis 42 3e-76 283
WERAM-Chg-0033 EAQ86725 Chaetomium globosum 41 1e-75 281
WERAM-Miv-0034 MVLG_04888T0 Microbotryum violaceum 39 2e-75 281
WERAM-Ast-0014 CADATEAP00005667 Aspergillus terreus 39 2e-75 280
WERAM-Lab-0047 EDQ99497 Laccaria bicolor 41 2e-75 280
WERAM-Sot-0015 PGSC0003DMT400014582 Solanum tuberosum 43 2e-75 280
WERAM-Trr-0039 EGR46026 Trichoderma reesei 41 3e-75 280
WERAM-Poa-0196 ENSPPYP00000022747.2 Pongo abelii 40 5e-75 279
WERAM-Coi-0028 EAS30926 Coccidioides immitis 39 2e-74 277
WERAM-Nol-0078 ENSNLEP00000009627.2 Nomascus leucogenys 40 3e-74 277
WERAM-Sah-0012 ENSSHAP00000001165.1 Sarcophilus harrisii 41 3e-74 276
WERAM-Leo-0130 ENSLOCP00000016135.1 Lepisosteus oculatus 40 3e-74 276
WERAM-Mel-0037 EGG03660 Melampsora laricipopulina 43 3e-74 276
WERAM-Gaga-0067 ENSGALP00000010190.4 Gallus gallus 40 5e-74 276
WERAM-Ved-0005 EGY17208 Verticillium dahliae 41 5e-74 276
WERAM-Asg-0010 AAS51704 Ashbya gossypii 40 5e-74 276
WERAM-Zyt-0016 Mycgr3P37223 Zymoseptoria tritici 38 6e-74 276
WERAM-Anp-0022 ENSAPLP00000003127.1 Anas platyrhynchos 38 6e-74 276
WERAM-Trv-0041 EHK18675 Trichoderma virens 41 7e-74 275
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 40 7e-74 275
WERAM-Fia-0117 ENSFALP00000010126.1 Ficedula albicollis 39 8e-74 275
WERAM-Pat-0104 ENSPTRP00000022412.3 Pan troglodytes 39 8e-74 275
WERAM-Nec-0012 EFNCRP00000001681 Neurospora crassa 39 1e-73 275
WERAM-Meg-0108 ENSMGAP00000010913.2 Meleagris gallopavo 39 1e-73 275
WERAM-Fuo-0035 FOXG_13914P0 Fusarium oxysporum 39 1e-73 275
WERAM-Pes-0174 ENSPSIP00000020522.1 Pelodiscus sinensis 41 1e-73 275
WERAM-Sac-0037 YNL021W Saccharomyces cerevisiae 40 6e-73 272
WERAM-Tag-0050 ENSTGUP00000003338.1 Taeniopygia guttata 40 1e-72 272
Created Date 25-Jun-2016