Tag |
Content |
WERAM ID |
WERAM-Ved-0005 |
Ensembl Protein ID |
EGY17208 |
Gene Name |
VDAG_00890 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
6.20e-111 |
369.7 |
69 |
418 |
HDAC |
Class-I |
6.00e-29 |
100.7 |
121 |
406 |
|
Organism |
Verticillium dahliae |
Domain Profile |
HDAC Class-II
class-2.txt 3 glvydekmlkhqale.enkekhpEkpeRiqailsrlqeaglle.................kleelkarkatkeelqlvHseehvelletaeklekeel 82 g +yd++m h + +++ +hpE+p+Ri++i++++++agll + +++ar+a kee++l H+ +h+ +e+ ++++ +el EGY17208 69 GCCYDDRMKLHCNADfTSHPHHPEDPRRIEEIIKAFKKAGLLYtgpeanvakivqhtptkYMWRIAAREAAKEEILLAHTPDHYAWVENLSTMSYTEL 166 6789999988876651444569*****************9998899999999998888766999********************************** PP class-2.txt 83 esltvdsd....siylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklk..vkkilivDwDvHh 174 ++l+v+ d s+y+ s s+ aa l++G +++++++v++ ++kn+fav+RPPGHHae++++ GFC+fnnv va+k+ qq+++ ++k+l++DwDvHh EGY17208 167 RALSVELDkgraSLYVGSLSFPAALLSCGGAIDTCKQVVESNVKNAFAVIRPPGHHAEYDQSLGFCFFNNVPVAVKVCQQEYPeiCRKVLVLDWDVHH 264 **666665333379********************************************************************999************* PP class-2.txt 175 GnGtqeifykdpkvlylSlHRydkgsffpesgs......gavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaa 266 GnG+q+ify+dp+vly+S+H y++g+f+p + + g ++++g+g+g+g n+N+ w+ ++mgd ey+aaf+++++piakeF+Pdlv++saGfDaa EGY17208 265 GNGIQNIFYQDPNVLYISIHVYENGQFYPGQPEnpmvpdGGMEHCGTGPGLGKNINIGWHAQGMGDGEYMAAFQKIIMPIAKEFNPDLVVISAGFDAA 362 ****************************9655456666699********************************************************* PP class-2.txt 267 egdplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322 +gd lgg+ vt+ cya++t++l++la+g++ ++lEGGynl+ai++++ av+++L+g EGY17208 363 DGDELGGCFVTPPCYAHMTHMLMSLADGKLAVCLEGGYNLRAISTSAVAVARTLMG 418 ****************************************************9985 PP
HDAC Class-I
class-1.txt 34 vlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvf.dglfeycqlitGasleaakkLnkkeadiainw.aG 129 ++++ ++k + ++ +++a +ee+l h+ ++ ++++ ++ + +el + + + g+ + + + f + l++G+++++ k++ +++ + a EGY17208 121 IVQHTPTKYMWRIAAREAAKEEILLAHTPDHYAWVENLSTMSYTELRALSVELDKGRASLYVgSLSFPAALLSCGGAIDTCKQVVESNVKNAFAViRP 218 5788999***********************999*999999988888877777777765543304446667789**********998877665543144 PP class-1.txt 130 GlhhakkseasGfcyvnDivlailellkkh....krvlyididlhhGDgveeafyttdrvmtvsfhkyge.effPgt........Gdlsdvgaekgky 214 hha +++ Gfc+ n++ +a+ ++++ ++vl +d d+hhG+g+++ fy+ v+ +s+h y++ +f+Pg G ++ g++ g EGY17208 219 PGHHAEYDQSLGFCFFNNVPVAVKVCQQEYpeicRKVLVLDWDVHHGNGIQNIFYQDPNVLYISIHVYENgQFYPGQpenpmvpdGGMEHCGTGPGLG 316 55*****************999987777552222699*******************************974699*954444455589999***99999 PP class-1.txt 215 yavnvPlk.dgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksf.nlpllvlGGGGYtlrnva 302 +n+ + +g+ D +y + f+++i ++ + f+P+ vv+ G D+ gD lg ++ +a++ +++ s + +l v GGY+lr ++ EGY17208 317 KNINIGWHaQGMGDGEYMAAFQKIIMPIAKEFNPDLVVISAGFDAADGDELGGCFVTPPCYAHMTHMLMSLaDGKLAVCLEGGYNLRAIS 406 9999987538*****************************************9999************99996778888889*****9987 PP
|
Protein Sequence (Fasta) | MDGEDWQMRD AAGSNGVAGP QPPPDQGPSV NGTTSSDEEY DEGYDEEYED SEDATVVSQL 60 RRRGQLPTGC CYDDRMKLHC NADFTSHPHH PEDPRRIEEI IKAFKKAGLL YTGPEANVAK 120 IVQHTPTKYM WRIAAREAAK EEILLAHTPD HYAWVENLST MSYTELRALS VELDKGRASL 180 YVGSLSFPAA LLSCGGAIDT CKQVVESNVK NAFAVIRPPG HHAEYDQSLG FCFFNNVPVA 240 VKVCQQEYPE ICRKVLVLDW DVHHGNGIQN IFYQDPNVLY ISIHVYENGQ FYPGQPENPM 300 VPDGGMEHCG TGPGLGKNIN IGWHAQGMGD GEYMAAFQKI IMPIAKEFNP DLVVISAGFD 360 AADGDELGGC FVTPPCYAHM THMLMSLADG KLAVCLEGGY NLRAISTSAV AVARTLMGEP 420 PPRMEIPKIN RDAARVLATV QAYQAPYWEC MRPGIVNVAD IQDQHATRLH DHVRLGQRQD 480 LATRHNMIPL YIQRDVLFKA YENQVLVTPN LQETERLLVI LHDPPQLVAQ PDSHDNHLES 540 HNAWIVDPVV EYIDWAVSQG FGVMDINVPA SLPQEEDTDA FIPRSPEKIM QAQLQELVCY 600 LWDNYIQLYE NATEIFLMGV GNAYLGVKVL LMGRDCKPRI TGVVNFVTGT LRPVKSDVDP 660 DLSAWYKEHS QVYIASDHLC WKSEDLTRKV QKRRFGSVKR SPTNGLSKMM QLHAEDVQAW 720 ILQAIASNKP ETTDDEKMS 739Protein Fasta Sequence
>EGY17208|Class-I|Verticillium dahliae MDGEDWQMRDAAGSNGVAGPQPPPDQGPSVNGTTSSDEEYDEGYDEEYEDSEDATVVSQLRRRGQLPTGCCYDDRMKLHCNADFTSHPHHPEDPRRIEEIIKAFKKAGLLYTGPEANVAKIVQHTPTKYMWRIAAREAAKEEILLAHTPDHYAWVENLSTMSYTELRALSVELDKGRASLYVGSLSFPAALLSCGGAIDTCKQVVESNVKNAFAVIRPPGHHAEYDQSLGFCFFNNVPVAVKVCQQEYPEICRKVLVLDWDVHHGNGIQNIFYQDPNVLYISIHVYENGQFYPGQPENPMVPDGGMEHCGTGPGLGKNINIGWHAQGMGDGEYMAAFQKIIMPIAKEFNPDLVVISAGFDAADGDELGGCFVTPPCYAHMTHMLMSLADGKLAVCLEGGYNLRAISTSAVAVARTLMGEPPPRMEIPKINRDAARVLATVQAYQAPYWECMRPGIVNVADIQDQHATRLHDHVRLGQRQDLATRHNMIPLYIQRDVLFKAYENQVLVTPNLQETERLLVILHDPPQLVAQPDSHDNHLESHNAWIVDPVVEYIDWAVSQGFGVMDINVPASLPQEEDTDAFIPRSPEKIMQAQLQELVCYLWDNYIQLYENATEIFLMGVGNAYLGVKVLLMGRDCKPRITGVVNFVTGTLRPVKSDVDPDLSAWYKEHSQVYIASDHLCWKSEDLTRKVQKRRFGSVKRSPTNGLSKMMQLHAEDVQAWILQAIASNKPETTDDEKMS
|
Nucleotide Sequence (Fasta) | CAGCTCCTCA AGCCTCGAAG CGCATCACTG GCGTAGCCCC AGATCTGATC GATCCTCCTG 60 GGAATCGGAG GCTTCCCTTC TCGAAAGCTC CCGGTCCCCG GTGTCCCAGA GGTCGACGGA 120 TGCAGAAAGA CGCCCCCATG GACGGGGAGG ACTGGCAGAT GCGCGATGCC GCAGGATCCA 180 ACGGTGTTGC AGGGCCCCAG CCTCCTCCAG ATCAGGGCCC CTCAGTCAAC GGCACTACTT 240 CCTCCGACGA GGAGTATGAC GAAGGCTATG ATGAGGAATA TGAGGACTCA GAGGACGCCA 300 CTGTCGTATC TCAGCTGCGC CGTCGTGGTC AACTTCCAAC AGGATGTTGT TATGATGATC 360 GGATGAAGCT GCACTGTAAC GCCGACTTTA CCTCTCATCC TCACCACCCG GAGGACCCAC 420 GTCGCATAGA GGAGATCATC AAGGCTTTCA AGAAAGCTGG TTTGCTCTAC ACAGGGCCCG 480 AAGCCAATGT TGCCAAAATT GTCCAACACA CCCCGACAAA GTACATGTGG CGCATCGCGG 540 CCCGCGAGGC CGCCAAGGAA GAGATTCTCC TCGCGCATAC TCCAGACCAC TATGCCTGGG 600 TAGAGAACCT GTCGACCATG TCCTACACCG AACTTCGTGC CCTCAGTGTC GAGCTCGACA 660 AGGGCCGTGC CTCTCTCTAC GTCGGCAGTC TTTCCTTTCC GGCAGCACTG CTGTCGTGTG 720 GAGGCGCCAT CGACACATGC AAGCAGGTTG TCGAAAGCAA TGTCAAGAAC GCCTTCGCTG 780 TCATCCGGCC GCCAGGACAC CATGCCGAGT ACGATCAGTC CCTTGGATTT TGTTTCTTCA 840 ACAACGTCCC AGTTGCTGTC AAGGTCTGCC AGCAGGAATA CCCCGAAATC TGCCGCAAGG 900 TCCTCGTGCT CGACTGGGAC GTTCACCATG GCAACGGCAT TCAAAACATC TTTTACCAAG 960 ATCCAAATGT TCTCTACATA TCCATACACG TCTATGAGAA TGGCCAGTTT TACCCCGGCC 1020 AGCCTGAAAA CCCCATGGTA CCGGATGGTG GTATGGAGCA TTGCGGTACT GGTCCTGGTC 1080 TCGGCAAGAA CATCAACATT GGCTGGCACG CGCAAGGCAT GGGCGACGGC GAATACATGG 1140 CTGCCTTCCA GAAGATCATC ATGCCCATCG CAAAGGAATT TAACCCTGAT CTCGTAGTCA 1200 TCTCGGCAGG TTTCGATGCC GCTGACGGCG ACGAGCTCGG TGGCTGCTTC GTTACGCCCC 1260 CGTGCTACGC CCACATGACG CACATGCTCA TGTCTCTCGC CGACGGCAAG CTTGCCGTGT 1320 GTCTCGAAGG TGGCTACAAT CTACGGGCGA TATCAACATC CGCCGTCGCC GTCGCCCGGA 1380 CGCTCATGGG CGAACCGCCC CCTAGAATGG AGATCCCCAA GATCAACCGG GATGCGGCGA 1440 GAGTCTTGGC CACGGTGCAA GCATACCAAG CGCCGTACTG GGAATGCATG CGGCCCGGCA 1500 TCGTCAATGT GGCTGATATC CAGGACCAGC ATGCGACGCG CTTGCACGAC CACGTTAGAC 1560 TCGGACAGCG GCAGGACCTC GCGACGCGTC ACAACATGAT CCCGCTTTAC ATCCAGCGAG 1620 ACGTACTTTT CAAGGCGTAT GAGAACCAAG TGCTGGTGAC GCCAAACTTG CAAGAAACAG 1680 AACGTCTTCT GGTTATTCTG CATGACCCGC CGCAACTGGT TGCCCAACCT GATTCTCATG 1740 ACAACCATCT GGAGTCTCAC AACGCGTGGA TTGTTGATCC GGTCGTCGAG TACATCGACT 1800 GGGCAGTAAG CCAGGGTTTC GGCGTCATGG ACATCAATGT CCCAGCCTCG TTGCCTCAAG 1860 AAGAAGACAC GGATGCTTTT ATTCCCCGCT CGCCAGAGAA GATCATGCAA GCCCAATTGC 1920 AGGAGTTGGT CTGCTATCTG TGGGACAATT ACATCCAGCT TTACGAGAAC GCTACAGAGA 1980 TCTTCTTGAT GGGTGTAGGT AATGCCTACC TGGGAGTCAA GGTCCTCCTC ATGGGCAGAG 2040 ATTGTAAGCC GCGCATCACA GGTGTTGTCA ACTTTGTCAC GGGCACGCTC CGTCCCGTCA 2100 AGTCAGACGT GGATCCAGAT CTGTCAGCCT GGTACAAGGA GCACTCACAG GTGTACATAG 2160 CGAGCGACCA TTTGTGCTGG AAGAGCGAGG ACTTGACGCG AAAGGTGCAG AAGCGGCGAT 2220 TCGGCTCGGT CAAGCGGAGC CCGACCAACG GCCTCAGTAA GATGATGCAG CTCCACGCGG 2280 AAGACGTCCA AGCCTGGATC TTGCAAGCCA TTGCCAGCAA CAAACCTGAG ACGACAGACG 2340 ACGAGAAGAT GTCATGAGCT AGAGGTAGAG AGTCGAGATT GGAGATTGGA GAGAATCTCG 2400 CTGCAAGTGG AATGTGGCCA GGCGATGGAG TTGGTTTGCG ATGTCATTTC TGCACTATGA 2460 GGGGGGATGG GTAGTTTGTG CGTATACACC TATTGGCTTC CGTCAAGCAT TTCGTCATGG 2520 AATTGACTGA GGCTTTCTAA GA
2543Nucleotide Fasta Sequence
>EGY17208|Class-I|Verticillium dahliae CAGCTCCTCAAGCCTCGAAGCGCATCACTGGCGTAGCCCCAGATCTGATCGATCCTCCTGGGAATCGGAGGCTTCCCTTCTCGAAAGCTCCCGGTCCCCGGTGTCCCAGAGGTCGACGGATGCAGAAAGACGCCCCCATGGACGGGGAGGACTGGCAGATGCGCGATGCCGCAGGATCCAACGGTGTTGCAGGGCCCCAGCCTCCTCCAGATCAGGGCCCCTCAGTCAACGGCACTACTTCCTCCGACGAGGAGTATGACGAAGGCTATGATGAGGAATATGAGGACTCAGAGGACGCCACTGTCGTATCTCAGCTGCGCCGTCGTGGTCAACTTCCAACAGGATGTTGTTATGATGATCGGATGAAGCTGCACTGTAACGCCGACTTTACCTCTCATCCTCACCACCCGGAGGACCCACGTCGCATAGAGGAGATCATCAAGGCTTTCAAGAAAGCTGGTTTGCTCTACACAGGGCCCGAAGCCAATGTTGCCAAAATTGTCCAACACACCCCGACAAAGTACATGTGGCGCATCGCGGCCCGCGAGGCCGCCAAGGAAGAGATTCTCCTCGCGCATACTCCAGACCACTATGCCTGGGTAGAGAACCTGTCGACCATGTCCTACACCGAACTTCGTGCCCTCAGTGTCGAGCTCGACAAGGGCCGTGCCTCTCTCTACGTCGGCAGTCTTTCCTTTCCGGCAGCACTGCTGTCGTGTGGAGGCGCCATCGACACATGCAAGCAGGTTGTCGAAAGCAATGTCAAGAACGCCTTCGCTGTCATCCGGCCGCCAGGACACCATGCCGAGTACGATCAGTCCCTTGGATTTTGTTTCTTCAACAACGTCCCAGTTGCTGTCAAGGTCTGCCAGCAGGAATACCCCGAAATCTGCCGCAAGGTCCTCGTGCTCGACTGGGACGTTCACCATGGCAACGGCATTCAAAACATCTTTTACCAAGATCCAAATGTTCTCTACATATCCATACACGTCTATGAGAATGGCCAGTTTTACCCCGGCCAGCCTGAAAACCCCATGGTACCGGATGGTGGTATGGAGCATTGCGGTACTGGTCCTGGTCTCGGCAAGAACATCAACATTGGCTGGCACGCGCAAGGCATGGGCGACGGCGAATACATGGCTGCCTTCCAGAAGATCATCATGCCCATCGCAAAGGAATTTAACCCTGATCTCGTAGTCATCTCGGCAGGTTTCGATGCCGCTGACGGCGACGAGCTCGGTGGCTGCTTCGTTACGCCCCCGTGCTACGCCCACATGACGCACATGCTCATGTCTCTCGCCGACGGCAAGCTTGCCGTGTGTCTCGAAGGTGGCTACAATCTACGGGCGATATCAACATCCGCCGTCGCCGTCGCCCGGACGCTCATGGGCGAACCGCCCCCTAGAATGGAGATCCCCAAGATCAACCGGGATGCGGCGAGAGTCTTGGCCACGGTGCAAGCATACCAAGCGCCGTACTGGGAATGCATGCGGCCCGGCATCGTCAATGTGGCTGATATCCAGGACCAGCATGCGACGCGCTTGCACGACCACGTTAGACTCGGACAGCGGCAGGACCTCGCGACGCGTCACAACATGATCCCGCTTTACATCCAGCGAGACGTACTTTTCAAGGCGTATGAGAACCAAGTGCTGGTGACGCCAAACTTGCAAGAAACAGAACGTCTTCTGGTTATTCTGCATGACCCGCCGCAACTGGTTGCCCAACCTGATTCTCATGACAACCATCTGGAGTCTCACAACGCGTGGATTGTTGATCCGGTCGTCGAGTACATCGACTGGGCAGTAAGCCAGGGTTTCGGCGTCATGGACATCAATGTCCCAGCCTCGTTGCCTCAAGAAGAAGACACGGATGCTTTTATTCCCCGCTCGCCAGAGAAGATCATGCAAGCCCAATTGCAGGAGTTGGTCTGCTATCTGTGGGACAATTACATCCAGCTTTACGAGAACGCTACAGAGATCTTCTTGATGGGTGTAGGTAATGCCTACCTGGGAGTCAAGGTCCTCCTCATGGGCAGAGATTGTAAGCCGCGCATCACAGGTGTTGTCAACTTTGTCACGGGCACGCTCCGTCCCGTCAAGTCAGACGTGGATCCAGATCTGTCAGCCTGGTACAAGGAGCACTCACAGGTGTACATAGCGAGCGACCATTTGTGCTGGAAGAGCGAGGACTTGACGCGAAAGGTGCAGAAGCGGCGATTCGGCTCGGTCAAGCGGAGCCCGACCAACGGCCTCAGTAAGATGATGCAGCTCCACGCGGAAGACGTCCAAGCCTGGATCTTGCAAGCCATTGCCAGCAACAAACCTGAGACGACAGACGACGAGAAGATGTCATGAGCTAGAGGTAGAGAGTCGAGATTGGAGATTGGAGAGAATCTCGCTGCAAGTGGAATGTGGCCAGGCGATGGAGTTGGTTTGCGATGTCATTTCTGCACTATGAGGGGGGATGGGTAGTTTGTGCGTATACACCTATTGGCTTCCGTCAAGCATTTCGTCATGGAATTGACTGAGGCTTTCTAAGA
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |