WERAM Information


Tag Content
WERAM ID WERAM-Orla-0211
Ensembl Protein ID ENSORLP00000025157.1
Gene Name hdac6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSORLG00000020288.1 ENSORLT00000025158.1 ENSORLP00000025157.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 1.60e-98 330.2 2 224
HDAC Class-I 4.80e-29 102.2 17 206
Organism Oryzias latipes
Domain Profile
  HDAC Class-II

           class-2.txt 117 lkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpes 205
l+g+++n++a+vRPPGHHae + ++GFClfn a++a+++q+ + +ili+DwDvHhGnGtq+if++d++vly+SlHRyd+g ffp+s
ENSORLP00000025157.1 2 LNGQVNNAVAIVRPPGHHAEMDFPCGFCLFNTTALTARHAQKVSHDLQILILDWDVHHGNGTQHIFEDDNSVLYISLHRYDNGAFFPSS 90
6899*****************************************9******************************************* PP
class-2.txt 206 gsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgglsvtakcyatltkqllklagg 294
++ga+++vg +kg g+nvN+aw+gg mgd++ylaaf++vv+pia+eF+P+lvlvsaGfDaa+gdplgg++vt+++ya++t++l++lagg
ENSORLP00000025157.1 91 KDGAPENVGVAKGAGYNVNLAWSGGRMGDSDYLAAFHQVVMPIATEFNPGLVLVSAGFDAAQGDPLGGYHVTPEGYAHFTHMLMSLAGG 179
***************************************************************************************** PP
class-2.txt 295 rvvlvlEGGynlkaiaeaveavvkaLlg 322
rv+++lEGGynlk+i+++++a++++Llg
ENSORLP00000025157.1 180 RVLFILEGGYNLKSISDSMAACTSVLLG 207
**************************96 PP
class-2.txt 130 PPGHHae 136
PP HH+
ENSORLP00000025157.1 218 PPPHHCA 224
999**97 PP

  HDAC Class-I

           class-1.txt 130 GlhhakkseasGfcyvnDivlailellk.khk.rvlyididlhhGDgveeafyttdrvmtvsfhkygee.ffPgt..Gdlsdvgaekgk 213
G hha + Gfc n l+ + +k +h+ ++l +d d+hhG+g ++ f+ + v+ +s+h+y+++ ffP++ G ++vg+ kg
ENSORLP00000025157.1 17 G-HHAEMDFPCGFCLFNTTALTARHAQKvSHDlQILILDWDVHHGNGTQHIFEDDNSVLYISLHRYDNGaFFPSSkdGAPENVGVAKGA 104
4.9**********************999755558********************************9854***97447789******** PP
class-1.txt 214 yyavnvPlkdg.idDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksf.nlpllvlGGGGYtlrn 300
y vn+ + g + D+ y + f++v+ ++ f+P v++ G D+ +gD+lg ++++ +g+a+ +++ s +l + GGY+l+
ENSORLP00000025157.1 105 GYNVNLAWSGGrMGDSDYLAAFHQVVMPIATEFNPGLVLVSAGFDAAQGDPLGGYHVTPEGYAHFTHMLMSLaGGRVLFILEGGYNLKS 193
********998689******************************************************999976788888899****** PP
class-1.txt 301 vaRcwtyetavvl 313
++ + t+v+l
ENSORLP00000025157.1 194 ISDSMAACTSVLL 206
**99999999876 PP

Protein Sequence
(Fasta)
MLNGQVNNAV AIVRPPGHHA EMDFPCGFCL FNTTALTARH AQKVSHDLQI LILDWDVHHG 60
NGTQHIFEDD NSVLYISLHR YDNGAFFPSS KDGAPENVGV AKGAGYNVNL AWSGGRMGDS 120
DYLAAFHQVV MPIATEFNPG LVLVSAGFDA AQGDPLGGYH VTPEGYAHFT HMLMSLAGGR 180
VLFILEGGYN LKSISDSMAA CTSVLLGDPP PSLATPLPPP HHCAAVAINK VIQHHAPYWK 240
Nucleotide Sequence
(Fasta)
CAGTCCGCCC AGCTAGCTGC TGGAAGCTGC TTTGCTGCTG TGGAGCATAT GTTAAACGGA 60
CAGGTAAATA ATGCCGTGGC CATCGTCCGT CCTCCAGGCC ATCACGCTGA GATGGACTTT 120
CCCTGCGGCT TTTGCCTCTT CAACACAACA GCACTCACTG CTCGCCATGC ACAGAAAGTC 180
TCCCATGATC TACAAATCTT GATTCTGGAC TGGGATGTTC ATCACGGGAA CGGGACGCAG 240
CACATATTTG AGGACGATAA CAGTGTTCTT TATATCTCCC TCCACCGCTA TGACAATGGG 300
GCTTTCTTTC CGTCATCAAA AGACGGTGCC CCTGAAAATG TGGGTGTGGC CAAAGGTGCC 360
GGGTATAATG TAAATTTGGC GTGGAGTGGA GGGCGAATGG GGGACTCTGA CTACCTGGCA 420
GCGTTTCACC AAGTTGTCAT GCCAATCGCA ACAGAGTTTA ACCCCGGCCT GGTTCTGGTG 480
TCCGCCGGGT TTGATGCAGC TCAGGGGGAT CCACTTGGTG GATATCACGT GACTCCAGAA 540
GGATACGCTC ACTTCACGCA CATGCTGATG TCACTTGCTG GAGGGCGGGT CCTATTCATC 600
CTGGAGGGAG GCTACAACCT CAAATCCATT TCTGACTCCA TGGCTGCCTG CACCAGTGTG 660
CTGCTGGGAG ACCCTCCCCC ATCACTGGCG ACCCCCCTCC CCCCCCCTCA CCACTGCGCT 720
GCAGTAGCCA TCAACAAGGT CATCCAGCAC CATGCCCCCT ACTGGAAGA
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orn-0011 ENSONIP00000001061.1 Oreochromis niloticus 83 5e-113 404
WERAM-Ten-0019 ENSTNIP00000004593.1 Tetraodon nigroviridis 83 1e-111 399
WERAM-Pof-0022 ENSPFOP00000001799.2 Poecilia formosa 82 1e-110 395
WERAM-Tar-0042 ENSTRUP00000010127.1 Takifugu rubripes 82 2e-110 395
WERAM-Xim-0160 ENSXMAP00000013063.1 Xiphophorus maculatus 81 3e-110 394
WERAM-Asm-0181 ENSAMXP00000017644.1 Astyanax mexicanus 71 2e-95 345
WERAM-Dar-0023 ENSDARP00000124246.1 Danio rerio 69 9e-95 343
WERAM-Myl-0104 ENSMLUP00000008295.2 Myotis lucifugus 68 9e-89 323
WERAM-Otg-0144 ENSOGAP00000012420.2 Otolemur garnettii 66 2e-88 322
WERAM-Ran-0209 ENSRNOP00000009295.5 Rattus norvegicus 66 1e-87 319
WERAM-Mum-0115 ENSMUSP00000033501.8 Mus musculus 66 4e-87 318
WERAM-Orc-0102 ENSOCUP00000008741.3 Oryctolagus cuniculus 65 7e-87 317
WERAM-Sah-0012 ENSSHAP00000001165.1 Sarcophilus harrisii 69 2e-86 315
WERAM-Ict-0125 ENSSTOP00000012693.2 Ictidomys tridecemlineatus 65 2e-86 315
WERAM-Aim-0139 ENSAMEP00000013236.1 Ailuropoda melanoleuca 66 3e-86 315
WERAM-Ova-0124 ENSOARP00000012678.1 Ovis aries 65 3e-86 315
WERAM-Bot-0122 ENSBTAP00000017618.5 Bos taurus 65 4e-86 314
WERAM-Fec-0031 ENSFCAP00000002366.3 Felis catus 65 5e-86 314
WERAM-Eqc-0001 ENSECAP00000001121.1 Equus caballus 65 8e-86 313
WERAM-Caf-0161 ENSCAFP00000022990.3 Canis familiaris 66 8e-86 313
WERAM-Xet-0155 ENSXETP00000050501.3 Xenopus tropicalis 64 2e-85 312
WERAM-Mod-0081 ENSMODP00000012731.2 Monodelphis domestica 71 4e-85 311
WERAM-Gog-0047 ENSGGOP00000004443.2 Gorilla gorilla 66 5e-85 311
WERAM-Hos-0047 ENSP00000365804.2 Homo sapiens 66 6e-85 310
WERAM-Caj-0022 ENSCJAP00000004409.2 Callithrix jacchus 65 2e-84 308
WERAM-Paa-0049 ENSPANP00000006915.1 Papio anubis 66 2e-84 308
WERAM-Sus-0177 ENSSSCP00000022636.1 Sus scrofa 63 2e-84 308
WERAM-Mam-0153 ENSMMUP00000021637.2 Macaca mulatta 66 2e-84 308
WERAM-Chs-0158 ENSCSAP00000009365.1 Chlorocebus sabaeus 66 3e-84 308
WERAM-Mup-0158 ENSMPUP00000013557.1 Mustela putorius furo 64 3e-84 308
WERAM-Ocp-0057 ENSOPRP00000005096.1 Ochotona princeps 61 4e-84 308
WERAM-Ptv-0077 ENSPVAP00000007213.1 Pteropus vampyrus 68 1e-83 306
WERAM-Lac-0055 ENSLACP00000007918.1 Latimeria chalumnae 62 1e-83 306
WERAM-Dio-0075 ENSDORP00000007462.1 Dipodomys ordii 64 2e-83 306
WERAM-Mae-0111 ENSMEUP00000010640.1 Macropus eugenii 68 2e-83 305
WERAM-Loa-0047 ENSLAFP00000003196.3 Loxodonta africana 65 2e-83 305
WERAM-Tas-0021 ENSTSYP00000002661.1 Tarsius syrichta 66 6e-83 304
WERAM-Cap-0109 ENSCPOP00000008049.2 Cavia porcellus 63 6e-83 304
WERAM-Dan-0022 ENSDNOP00000002136.3 Dasypus novemcinctus 69 2e-82 302
WERAM-Anc-0082 ENSACAP00000007918.3 Anolis carolinensis 61 3e-81 298
WERAM-Ere-0025 ENSEEUP00000001892.1 Erinaceus europaeus 62 2e-79 292
WERAM-Pem-0058 ENSPMAP00000006830.1 Petromyzon marinus 60 4e-79 291
WERAM-Prc-0036 ENSPCAP00000003334.1 Procavia capensis 68 8e-79 290
WERAM-Tut-0056 ENSTTRP00000004443.1 Tursiops truncatus 68 6e-74 274
WERAM-Poa-0196 ENSPPYP00000022747.2 Pongo abelii 63 4e-72 268
WERAM-Leo-0130 ENSLOCP00000016135.1 Lepisosteus oculatus 53 4e-70 261
WERAM-Pes-0126 ENSPSIP00000015149.1 Pelodiscus sinensis 60 4e-69 258
WERAM-Lem-0023 CBX90551 Leptosphaeria maculans 53 1e-68 256
WERAM-Trv-0041 EHK18675 Trichoderma virens 54 4e-68 254
WERAM-Kop-0012 CAY68916 Komagataella pastoris 50 3e-67 252
WERAM-Drm-0028 FBpp0290988 Drosophila melanogaster 58 5e-67 251
WERAM-Fuo-0035 FOXG_13914P0 Fusarium oxysporum 53 1e-66 250
WERAM-Pyt-0023 EFQ89752 Pyrenophora teres 54 2e-66 249
WERAM-Fia-0056 ENSFALP00000004005.1 Ficedula albicollis 51 2e-66 249
WERAM-Gaga-0049 ENSGALP00000033098.3 Gallus gallus 51 2e-66 249
WERAM-Trr-0039 EGR46026 Trichoderma reesei 53 2e-66 249
WERAM-Tag-0050 ENSTGUP00000003338.1 Taeniopygia guttata 51 2e-66 249
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 50 2e-66 249
WERAM-Anp-0035 ENSAPLP00000004005.1 Anas platyrhynchos 51 3e-66 248
WERAM-Ect-0051 ENSETEP00000005266.1 Echinops telfairi 63 3e-66 248
WERAM-Pat-0104 ENSPTRP00000022412.3 Pan troglodytes 51 3e-66 248
WERAM-Meg-0023 ENSMGAP00000001752.2 Meleagris gallopavo 51 4e-66 248
WERAM-Phn-0010 SNOT_01279 Phaeosphaeria nodorum 52 4e-66 248
WERAM-Gag-0014 GGTG_04308T0 Gaeumannomyces graminis 53 5e-66 248
WERAM-Gaa-0053 ENSGACP00000006953.1 Gasterosteus aculeatus 57 7e-66 247
WERAM-Chg-0033 EAQ86725 Chaetomium globosum 53 8e-66 247
WERAM-Gam-0063 ENSGMOP00000006368.1 Gadus morhua 56 1e-65 246
WERAM-Pytr-0015 EDU46537 Pyrenophora triticirepentis 53 1e-65 246
WERAM-Asn-0017 CADANIAP00004063 Aspergillus nidulans 54 1e-65 246
WERAM-Nol-0183 ENSNLEP00000020216.1 Nomascus leucogenys 50 2e-65 246
WERAM-Nec-0012 EFNCRP00000001681 Neurospora crassa 53 3e-65 245
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 50 5e-65 244
WERAM-Spr-0021 CBQ72644 Sporisorium reilianum 53 7e-65 244
WERAM-Mao-0002 MGG_01076T0 Magnaporthe oryzae 50 8e-65 243
WERAM-Map-0033 MAPG_10880T0 Magnaporthe poae 52 8e-65 243
WERAM-Orni-0078 ONIVA07G19970.1 Oryza nivara 53 1e-64 243
WERAM-Sem-0022 EFJ08599 Selaginella moellendorffii 50 3e-64 242
WERAM-Asc-0002 CADACLAP00000048 Aspergillus clavatus 53 4e-64 241
WERAM-Glm-0045 GLYMA05G00460.1 Glycine max 50 4e-64 241
WERAM-Scp-0036 SPBC800.03.1:pep Schizosaccharomyces pombe 52 4e-64 241
WERAM-Yal-0023 CAG79971 Yarrowia lipolytica 50 7e-64 240
WERAM-Ast-0014 CADATEAP00005667 Aspergillus terreus 53 9e-64 240
WERAM-Coi-0028 EAS30926 Coccidioides immitis 51 1e-63 239
WERAM-Tub-0137 ENSTBEP00000014805.1 Tupaia belangeri 52 1e-63 239
WERAM-Tum-0026 CAZ84932 Tuber melanosporum 51 2e-63 239
WERAM-Scj-0031 EEB08679 Schizosaccharomyces japonicus 52 2e-63 239
WERAM-Crn-0010 AAW42071 Cryptococcus neoformans 51 5e-63 238
WERAM-Prp-0049 EMJ12067 Prunus persica 53 7e-63 237
WERAM-Cag-0018 CAG60803 Candida glabrata 50 8e-63 237
WERAM-Hov-0018 MLOC_16422.1 Hordeum vulgare 54 1e-62 236
WERAM-Aet-0088 EMT31322 Aegilops tauschii 53 1e-62 236
WERAM-Tra-0075 Traes_2BS_BD56E0E91.2 Triticum aestivum 53 1e-62 236
WERAM-Ved-0005 EGY17208 Verticillium dahliae 48 2e-62 236
WERAM-Zem-0143 GRMZM2G457889_P01 Zea mays 53 3e-62 235
WERAM-Caa-0034 KGT64501 Candida albicans 50 3e-62 235
WERAM-Tru-0054 TRIUR3_22712-P1 Triticum urartu 53 3e-62 235
Created Date 25-Jun-2016