WERAM Information


Tag Content
WERAM ID WERAM-Glm-0221
Ensembl Protein ID GLYMA17G08581.1
Gene Name GLYMA_17G078000
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
GLYMA17G08581 GLYMA17G08581.1 GLYMA17G08581.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 8.20e-127 424.7 15 336
HDAC Class-I 1.10e-36 128.8 15 327
Organism Glycine max
Domain Profile
  HDAC Class-II

      class-2.txt   2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletae.klekeelesltvdsdsiyl 94 
+gl+yde+m+kh+++ +++ hpE+p+Ri+ai++rlq+ag+l++++ l+a++a++++l+lvHs +hv+l+++ + k+ +++ ++++++ +siy+
GLYMA17G08581.1 15 VGLLYDETMCKHHTPDDED--HPENPNRIRAIWNRLQSAGVLQRCVILEAKEAEDKHLLLVHSINHVNLIKNISsKQFNSRRHKIASKLGSIYF 106
689***********99988..***************************************************998888999999********** PP
class-2.txt 95 esksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklk...vkkilivDwDvHhGnGtqeifykd 185
++ s++aa la+G+++e+v++v++ el+ ++a+vRPPGHHae+++amGFClfnnvavaa++l+++ + vkkilivDwDvHhGnGtq++f++d
GLYMA17G08581.1 107 NEGSSEAAYLAAGSAVEVVKRVASRELDSAVAIVRPPGHHAEQQEAMGFCLFNNVAVAARYLLDERPelgVKKILIVDWDVHHGNGTQKMFWND 200
***************************************************************9987778************************ PP
class-2.txt 186 pkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgglsvtak 279
++vl++S+HR++ gsf+p+ ++g ++ +geg+g g+n+Nv+w++g +gda+y a++++++lp+akeF+Pd+++vsaGfDaa gdplgg+ vt+
GLYMA17G08581.1 201 SRVLFFSVHRHEFGSFYPANDDGFYTMIGEGAGAGYNINVPWENGRCGDADYFAVWDHILLPVAKEFNPDIIIVSAGFDAAVGDPLGGCLVTPF 294
********************************************************************************************** PP
class-2.txt 280 cyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLl 321
+y+ l ++l+++a+gr+vl+lEGGynl++i+++++a++++Ll
GLYMA17G08581.1 295 GYSVLLEKLMNFAEGRIVLILEGGYNLDSISKSMHACLEVLL 336
****************************************98 PP

  HDAC Class-I

      class-1.txt   3 vayaydedvgeyhy..gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPv 94 
v yde++ ++h+ +++hp p+r++ + + + + g+ ++ i+++k+a+ ++ll +hs ++++++k++++++ ++ +++ +g+
GLYMA17G08581.1 15 VGLLYDETMCKHHTpdDEDHPENPNRIRAIWNRLQSAGVLQRCVILEAKEAEDKHLLLVHSINHVNLIKNISSKQFNSRRHKI-ASKLGS-IYF 106
6677899999888765789****************************************************999887666443.334543.445 PP
class-1.txt 95 fdglfeycqlitGasleaakkLnkkeadiainw.aGGlhhakkseasGfcyvnDivlailellkk.....hkrvlyididlhhGDgveeafytt 182
+g e + l +G+++e +k++ ++e d a+ hha ++ea Gfc n++ +a ll + k++l +d d+hhG+g ++ f +
GLYMA17G08581.1 107 NEGSSEAAYLAAGSAVEVVKRVASRELDSAVAIvRPPGHHAEQQEAMGFCLFNNVAVAARYLLDErpelgVKKILIVDWDVHHGNGTQKMFWND 200
678899999**************999886666413455*********************9999742233368********************** PP
class-1.txt 183 drvmtvsfhkyg.eeffPgt..GdlsdvgaekgkyyavnvPlkdg.idDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsik 272
+rv+ s+h+++ +f+P+ G + +g++ g y +nvP ++g + D y ++ +++ +v + f+P+++++ G D+ gD+lg ++
GLYMA17G08581.1 201 SRVLFFSVHRHEfGSFYPANddGFYTMIGEGAGAGYNINVPWENGrCGDADYFAVWDHILLPVAKEFNPDIIIVSAGFDAAVGDPLGGCLVTPF 294
********987633599*9733557889999999*********99899********************************************** PP
class-1.txt 273 ghaecvkfvksf.nlpllvlGGGGYtlrnvaRc 304
g++ ++ + +f + ++++ GGY+l +++
GLYMA17G08581.1 295 GYSVLLEKLMNFaEGRIVLILEGGYNLDSISKS 327
*******9999977788888899***9999875 PP

Protein Sequence
(Fasta)
MERENENSVN AQRRVGLLYD ETMCKHHTPD DEDHPENPNR IRAIWNRLQS AGVLQRCVIL 60
EAKEAEDKHL LLVHSINHVN LIKNISSKQF NSRRHKIASK LGSIYFNEGS SEAAYLAAGS 120
AVEVVKRVAS RELDSAVAIV RPPGHHAEQQ EAMGFCLFNN VAVAARYLLD ERPELGVKKI 180
LIVDWDVHHG NGTQKMFWND SRVLFFSVHR HEFGSFYPAN DDGFYTMIGE GAGAGYNINV 240
PWENGRCGDA DYFAVWDHIL LPVAKEFNPD IIIVSAGFDA AVGDPLGGCL VTPFGYSVLL 300
EKLMNFAEGR IVLILEGGYN LDSISKSMHA CLEVLLADQP VIGSAEAYPF ESTWRVIQAV 360
RQVLSPFWPT LARELPHKLI SPMAPPPYTL ISSSDTEAED DKGALSSENL VELLEDVIKP 420
LSELKVDADK ETDVSSTWRS ELSNVYIWYA SYGSNMWKAI LNCHLAGGQV EGMKKDCSGS 480
VNRTLPKAIL WKTFPCHIFF GCDSSHSWGV GGVAFLNPEK NFQHNTYMCL YKISLEQFND 540
ILFQENALSL DAGSPLFDIT TVNAISNKEF NSLEVVKGAW YGNVVYLGKE QDIPVVTMTC 600
SLLDIGNFKS GKLPLRAPNK AYANTLIKGL VDGEQLSEVE AIAYIEGAAK SL 652
Nucleotide Sequence
(Fasta)
GTGAATTCCC TCCTAAGCCA ATCAAACAAT CTTTGTCTTC CATTGAAAAG GAAGAAGTGG 60
AGGGAAATTG AAAGGGAAAA AGGTATATAA GCGGAAAGAA TAGAGTTTCA AATTCAAAAT 120
CACTTGTTTC TCACTTCTAC TTTCCTTCAC TCTCCGAGAA ACCATGGAGC GTGAAAACGA 180
GAACAGCGTC AACGCTCAAC GCCGCGTGGG TTTACTCTAC GACGAGACTA TGTGTAAGCA 240
CCACACACCA GACGACGAGG ACCATCCCGA GAACCCTAAT CGCATCAGAG CCATTTGGAA 300
CAGACTCCAA AGCGCCGGCG TTCTCCAACG ATGCGTGATT TTGGAGGCCA AAGAAGCTGA 360
AGACAAACAT CTACTGTTGG TGCATTCTAT AAACCATGTG AATCTGATTA AGAACATCAG 420
CTCAAAGCAG TTCAATTCGC GGAGGCATAA GATTGCCTCA AAATTGGGTT CCATATACTT 480
TAACGAAGGT TCATCAGAGG CTGCGTACCT TGCCGCTGGC TCTGCAGTAG AGGTTGTTAA 540
AAGAGTGGCA AGCAGGGAAT TGGATTCTGC TGTTGCCATT GTTAGGCCTC CGGGTCATCA 600
TGCAGAACAA CAAGAAGCTA TGGGATTTTG TCTGTTCAAC AATGTGGCAG TTGCTGCAAG 660
ATATCTCTTA GACGAAAGAC CAGAATTAGG TGTGAAGAAA ATATTAATTG TTGATTGGGA 720
TGTCCATCAT GGAAATGGTA CTCAAAAAAT GTTCTGGAAT GATTCTCGAG TTTTATTCTT 780
TTCTGTTCAC AGGCATGAGT TTGGGAGTTT TTATCCAGCT AATGATGATG GATTTTATAC 840
CATGATTGGA GAAGGAGCAG GTGCTGGATA TAATATAAAT GTCCCCTGGG AGAATGGGCG 900
ATGTGGTGAT GCAGATTACT TTGCAGTGTG GGACCACATC TTGCTTCCTG TTGCTAAAGA 960
ATTTAATCCA GATATAATTA TAGTTTCTGC TGGATTTGAT GCAGCTGTTG GTGACCCTCT 1020
GGGAGGATGC CTTGTCACAC CATTTGGTTA TTCTGTTCTG TTGGAAAAGT TGATGAATTT 1080
TGCTGAAGGT AGGATTGTAT TGATTCTAGA AGGTGGATAT AATCTTGATT CCATCTCAAA 1140
ATCAATGCAT GCCTGCTTGG AAGTTTTGCT AGCAGACCAG CCTGTTATTG GATCTGCAGA 1200
GGCCTATCCA TTTGAATCTA CATGGCGTGT GATTCAAGCG GTTCGCCAGG TTTTAAGTCC 1260
CTTTTGGCCT ACACTTGCAC GTGAATTACC GCACAAGTTA ATCTCACCAA TGGCACCACC 1320
TCCGTATACT CTTATCTCGA GCTCTGACAC TGAGGCTGAG GATGATAAGG GTGCACTAAG 1380
TTCAGAAAAT CTTGTTGAAC TTCTTGAGGA TGTCATAAAA CCACTTTCTG AACTGAAAGT 1440
TGATGCTGAT AAAGAGACTG ATGTTTCTAG TACTTGGCGA TCGGAATTGT CAAATGTTTA 1500
TATATGGTAT GCCTCATATG GATCAAATAT GTGGAAAGCA ATATTAAATT GCCACCTAGC 1560
AGGTGGACAG GTGGAAGGCA TGAAGAAGGA CTGTTCTGGT TCAGTGAATA GAACTCTGCC 1620
AAAAGCGATC CTGTGGAAAA CTTTCCCTTG TCATATATTT TTCGGTTGTG ATTCATCACA 1680
TTCATGGGGT GTGGGAGGTG TTGCATTTCT TAATCCTGAG AAAAACTTTC AGCACAACAC 1740
CTACATGTGC CTGTACAAAA TTTCGCTAGA GCAGTTCAAT GATATTTTGT TTCAGGAAAA 1800
TGCTTTAAGC CTTGATGCAG GCTCTCCTTT ATTTGATATA ACTACCGTGA ATGCTATCTC 1860
TAACAAGGAG TTCAACTCTC TGGAGGTTGT CAAGGGTGCT TGGTATGGCA ATGTTGTCTA 1920
CTTAGGAAAG GAGCAGGATA TTCCAGTAGT TACCATGACG TGTTCACTTC TTGATATTGG 1980
AAATTTCAAA TCTGGGAAGC TACCCTTACG TGCCCCTAAT AAAGCATATG CCAACACCTT 2040
AATAAAAGGG TTGGTTGATG GAGAACAGCT TTCAGAGGTG GAAGCCATCG CTTACATAGA 2100
AGGTGCTGCT AAATCATTGT AATTTGCATA GGCGTGCCAT TTATTTTAGG TGTAAAATCT 2160
TCTAGAATAA CTTACTCGTA CAAAAAAAGA TTCTACTTGT AGATATTGGG TAACTAAACC 2220
TCATAGTATT GCTACGAGAT TCTGCATATT TCTCCTAGTT TTGGATGTGC CGTGCGCAGC 2280
TACACTTTCA TTTGCTACAA TGCTGGTGCA GCGCTGCATG TATATTTTGA GTGCTAACAT 2340
TTAGTTTTAA CTAGAATATT TAGGGAAATT GTCTAAATGA TTGAATTGCT GCTTTATCTA 2400
CCA 2404
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Met-0112 KEH32016 Medicago truncatula 76 0.0 1058
WERAM-Pot-0045 POPTR_0004s09180.1 Populus trichocarpa 68 0.0 919
WERAM-Thc-0031 EOY22062 Theobroma cacao 68 0.0 913
WERAM-Viv-0107 VIT_17s0000g07280.t01 Vitis vinifera 67 0.0 912
WERAM-Bro-0134 Bo7g098310.1 Brassica oleracea 63 0.0 863
WERAM-Brr-0068 Bra012984.1-P Brassica rapa 63 0.0 861
WERAM-Art-0146 AT5G61060.1 Arabidopsis thaliana 63 0.0 850
WERAM-Arl-0149 scaffold_802745.1 Arabidopsis lyrata 64 0.0 842
WERAM-Prp-0049 EMJ12067 Prunus persica 71 0.0 810
WERAM-Mua-0066 GSMUA_Achr4P03250_001 Musa acuminata 58 0.0 799
WERAM-Sol-0055 Solyc03g115150.2.1 Solanum lycopersicum 57 0.0 789
WERAM-Sei-0109 Si029091m Setaria italica 57 0.0 783
WERAM-Orgl-0076 OGLUM07G21150.1 Oryza glumaepatula 55 0.0 776
WERAM-Ori-0088 BGIOSGA026083-PA Oryza indica 55 0.0 776
WERAM-Org-0078 ORGLA07G0164500.1 Oryza glaberrima 55 0.0 775
WERAM-Ors-0072 OS07T0602200-01 Oryza sativa 55 0.0 774
WERAM-Orr-0082 ORUFI07G22240.1 Oryza rufipogon 55 0.0 774
WERAM-Orbr-0087 OB07G26850.1 Oryza brachyantha 56 0.0 774
WERAM-Orni-0078 ONIVA07G19970.1 Oryza nivara 56 0.0 768
WERAM-Lep-0079 LPERR07G18450.1 Leersia perrieri 55 0.0 760
WERAM-Tra-0099 Traes_2DS_DFCAF1EA5.1 Triticum aestivum 54 0.0 754
WERAM-Sob-0036 Sb02g038550.1 Sorghum bicolor 55 0.0 746
WERAM-Zem-0143 GRMZM2G457889_P01 Zea mays 54 0.0 743
WERAM-Orp-0076 OPUNC07G19850.1 Oryza punctata 53 0.0 728
WERAM-Brd-0010 BRADI1G22240.1 Brachypodium distachyon 53 0.0 723
WERAM-Aet-0088 EMT31322 Aegilops tauschii 54 0.0 688
WERAM-Orl-0040 KN538895.1_FGP007 Oryza longistaminata 53 0.0 673
WERAM-Orb-0079 OBART07G21300.1 Oryza barthii 54 0.0 669
WERAM-Amt-0091 ERM99985 Amborella trichopoda 52 0.0 664
WERAM-Sem-0010 EFJ19764 Selaginella moellendorffii 48 2e-167 587
WERAM-Tru-0053 TRIUR3_22556-P1 Triticum urartu 45 3e-136 483
WERAM-Hov-0018 MLOC_16422.1 Hordeum vulgare 64 3e-136 483
WERAM-Php-0085 PP1S34_252V6.1 Physcomitrella patens 50 6e-118 422
WERAM-Ran-0201 ENSRNOP00000063689.2 Rattus norvegicus 47 1e-91 335
WERAM-Aim-0139 ENSAMEP00000013236.1 Ailuropoda melanoleuca 42 3e-91 333
WERAM-Asm-0181 ENSAMXP00000017644.1 Astyanax mexicanus 44 4e-91 333
WERAM-Caf-0161 ENSCAFP00000022990.3 Canis familiaris 46 5e-91 332
WERAM-Pof-0022 ENSPFOP00000001799.2 Poecilia formosa 41 8e-91 332
WERAM-Mum-0115 ENSMUSP00000033501.8 Mus musculus 47 8e-91 332
WERAM-Ict-0125 ENSSTOP00000012693.2 Ictidomys tridecemlineatus 46 3e-90 330
WERAM-Eqc-0001 ENSECAP00000001121.1 Equus caballus 44 4e-90 330
WERAM-Mup-0158 ENSMPUP00000013557.1 Mustela putorius furo 46 4e-90 330
WERAM-Fec-0031 ENSFCAP00000002366.3 Felis catus 46 5e-90 329
WERAM-Xet-0155 ENSXETP00000050501.3 Xenopus tropicalis 44 1e-89 328
WERAM-Xim-0160 ENSXMAP00000013063.1 Xiphophorus maculatus 46 2e-89 327
WERAM-Myl-0104 ENSMLUP00000008295.2 Myotis lucifugus 45 4e-89 326
WERAM-Gog-0047 ENSGGOP00000004443.2 Gorilla gorilla 46 8e-89 325
WERAM-Chs-0158 ENSCSAP00000009365.1 Chlorocebus sabaeus 46 8e-89 325
WERAM-Mam-0153 ENSMMUP00000021637.2 Macaca mulatta 46 8e-89 325
WERAM-Paa-0049 ENSPANP00000006915.1 Papio anubis 46 1e-88 325
WERAM-Dar-0023 ENSDARP00000124246.1 Danio rerio 45 1e-88 325
WERAM-Hos-0047 ENSP00000365804.2 Homo sapiens 46 2e-88 324
WERAM-Ocp-0057 ENSOPRP00000005096.1 Ochotona princeps 46 2e-88 323
WERAM-Orn-0011 ENSONIP00000001061.1 Oreochromis niloticus 44 3e-88 323
WERAM-Orc-0102 ENSOCUP00000008741.3 Oryctolagus cuniculus 45 3e-88 323
WERAM-Ten-0019 ENSTNIP00000004593.1 Tetraodon nigroviridis 44 3e-88 323
WERAM-Tar-0042 ENSTRUP00000010127.1 Takifugu rubripes 46 8e-88 322
WERAM-Caj-0022 ENSCJAP00000004409.2 Callithrix jacchus 40 8e-88 322
WERAM-Mod-0081 ENSMODP00000012731.2 Monodelphis domestica 45 3e-87 320
WERAM-Dio-0075 ENSDORP00000007462.1 Dipodomys ordii 43 1e-86 318
WERAM-Anc-0082 ENSACAP00000007918.3 Anolis carolinensis 38 3e-86 317
WERAM-Mae-0111 ENSMEUP00000010640.1 Macropus eugenii 45 3e-86 317
WERAM-Cap-0109 ENSCPOP00000008049.2 Cavia porcellus 48 2e-85 314
WERAM-Dan-0022 ENSDNOP00000002136.3 Dasypus novemcinctus 48 7e-85 312
WERAM-Sus-0177 ENSSSCP00000022636.1 Sus scrofa 46 9e-85 311
WERAM-Lac-0055 ENSLACP00000007918.1 Latimeria chalumnae 45 1e-84 311
WERAM-Otg-0144 ENSOGAP00000012420.2 Otolemur garnettii 46 1e-84 311
WERAM-Ptv-0077 ENSPVAP00000007213.1 Pteropus vampyrus 48 5e-84 309
WERAM-Pem-0058 ENSPMAP00000006830.1 Petromyzon marinus 41 1e-83 308
WERAM-Loa-0047 ENSLAFP00000003196.3 Loxodonta africana 47 3e-83 307
WERAM-Ova-0124 ENSOARP00000012678.1 Ovis aries 45 4e-83 306
WERAM-Bot-0122 ENSBTAP00000017618.5 Bos taurus 46 6e-83 306
WERAM-Tut-0056 ENSTTRP00000004443.1 Tursiops truncatus 47 1e-80 298
WERAM-Drm-0028 FBpp0290988 Drosophila melanogaster 41 2e-80 298
WERAM-Ast-0014 CADATEAP00005667 Aspergillus terreus 40 6e-80 296
WERAM-Prc-0036 ENSPCAP00000003334.1 Procavia capensis 42 1e-79 295
WERAM-Lem-0023 CBX90551 Leptosphaeria maculans 41 2e-79 294
WERAM-Asn-0017 CADANIAP00004063 Aspergillus nidulans 41 9e-79 292
WERAM-Sah-0012 ENSSHAP00000001165.1 Sarcophilus harrisii 45 2e-78 290
WERAM-Tas-0021 ENSTSYP00000002661.1 Tarsius syrichta 44 4e-78 290
WERAM-Poa-0196 ENSPPYP00000022747.2 Pongo abelii 41 6e-78 289
WERAM-Yal-0023 CAG79971 Yarrowia lipolytica 41 6e-78 289
WERAM-Caa-0034 KGT64501 Candida albicans 41 7e-78 289
WERAM-Kop-0012 CAY68916 Komagataella pastoris 41 1e-77 288
WERAM-Nol-0078 ENSNLEP00000009627.2 Nomascus leucogenys 40 1e-77 288
WERAM-Asc-0002 CADACLAP00000048 Aspergillus clavatus 43 2e-77 287
WERAM-Kll-0020 CAG99415 Kluyveromyces lactis 39 4e-77 286
WERAM-Tum-0026 CAZ84932 Tuber melanosporum 41 5e-77 286
WERAM-Coi-0028 EAS30926 Coccidioides immitis 40 5e-77 286
WERAM-Pytr-0015 EDU46537 Pyrenophora triticirepentis 40 6e-77 286
WERAM-Crn-0010 AAW42071 Cryptococcus neoformans 43 1e-76 285
WERAM-Mao-0002 MGG_01076T0 Magnaporthe oryzae 39 2e-76 284
WERAM-Pyt-0023 EFQ89752 Pyrenophora teres 40 3e-76 283
WERAM-Miv-0034 MVLG_04888T0 Microbotryum violaceum 40 5e-76 283
WERAM-Pat-0185 ENSPTRP00000037550.5 Pan troglodytes 41 7e-76 282
WERAM-Spr-0021 CBQ72644 Sporisorium reilianum 43 2e-75 281
WERAM-Orla-0013 ENSORLP00000001341.1 Oryzias latipes 40 3e-75 280
WERAM-Meg-0084 ENSMGAP00000008226.2 Meleagris gallopavo 37 3e-75 280
WERAM-Gaga-0067 ENSGALP00000010190.4 Gallus gallus 40 4e-75 280
WERAM-Scj-0031 EEB08679 Schizosaccharomyces japonicus 40 4e-75 280
WERAM-Fia-0117 ENSFALP00000010126.1 Ficedula albicollis 40 7e-75 279
WERAM-Mel-0037 EGG03660 Melampsora laricipopulina 39 7e-75 279
WERAM-Scp-0036 SPBC800.03.1:pep Schizosaccharomyces pombe 41 3e-74 277
WERAM-Usm-0012 UM02102P0 Ustilago maydis 39 4e-74 276
WERAM-Lab-0047 EDQ99497 Laccaria bicolor 43 5e-74 276
WERAM-Anp-0061 ENSAPLP00000006782.1 Anas platyrhynchos 40 2e-73 274
WERAM-Asg-0010 AAS51704 Ashbya gossypii 40 3e-73 274
WERAM-Pes-0124 ENSPSIP00000014863.1 Pelodiscus sinensis 40 5e-73 273
WERAM-Sac-0037 YNL021W Saccharomyces cerevisiae 38 5e-73 273
WERAM-Sot-0015 PGSC0003DMT400014582 Solanum tuberosum 42 1e-72 272
WERAM-Cag-0018 CAG60803 Candida glabrata 38 1e-72 272
WERAM-Aso-0015 CADAORAP00001816 Aspergillus oryzae 39 2e-72 271
WERAM-Zyt-0016 Mycgr3P37223 Zymoseptoria tritici 37 3e-72 270
WERAM-Cae-0008 C10E2.3a Caenorhabditis elegans 40 4e-72 270
WERAM-Tag-0054 ENSTGUP00000003859.1 Taeniopygia guttata 41 4e-72 270
WERAM-Gaa-0030 ENSGACP00000005071.1 Gasterosteus aculeatus 39 5e-72 269
Created Date 25-Jun-2016