Tag |
Content |
WERAM ID |
WERAM-Brd-0010 |
Ensembl Protein ID |
BRADI1G22240.1 |
Gene Name |
BRADI1G22240.1 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
1.10e-123 |
413.2 |
23 |
345 |
HDAC |
Class-I |
1.60e-39 |
136.9 |
39 |
342 |
|
Organism |
Brachypodium distachyon |
Domain Profile |
HDAC Class-II
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletae.klekeelesltvdsdsiyle 95 +gl+yde+m++h+++ ++ hpE+peR++ai+++l e+g++e+++ + a++a+++ +++vHs++hv+l+++ + k ++ + ++l+++++siy++ BRADI1G22240.1 23 VGLLYDERMCAHATPDGKY--HPENPERLRAIWKKLGEQGVAERCVIMPAKEAKDKYIASVHSSTHVKLMKSISsKEHNYRRKNLASNYNSIYFN 115 689*************999..***************************************************997888889999*********** PP class-2.txt 96 sksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklk...vkkilivDwDvHhGnGtqeifykdpk 187 + s+++a la+G+v+e+++kv++gel+ ++a+vRPPGHHae++++mGFClfnnva+aa++l+++ + +kkilivDwDvHhGnGtq++fy+d++ BRADI1G22240.1 116 EGSSESAFLAAGSVIEVAEKVAAGELSSAIALVRPPGHHAEHNEPMGFCLFNNVAIAANYLLNERPdlgIKKILIVDWDVHHGNGTQKMFYNDSR 210 **************************************************************9987788************************** PP class-2.txt 188 vlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgglsvtakcya 282 vl++S+HR+d+g f+p++g+++ +geg+g+g+n+Nv+wn+g++gda+y+aa+++v+lp+a+ F+Pd++l+saGfDaa+gdplgg++vt+++ya BRADI1G22240.1 211 VLFFSVHRFDHGAFYPSQGDASHCFIGEGDGQGYNINVPWNHGGCGDADYIAAWDHVLLPVAEAFDPDIILLSAGFDAARGDPLGGCDVTPDGYA 305 ****************9999*************************************************************************** PP class-2.txt 283 tltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322 +l +ll++a+gr+v++lEGGyn +ia++v ++k+Llg BRADI1G22240.1 306 RLLTKLLGFAKGRMVMALEGGYNTVSIANSVLFCAKVLLG 345 **************************************96 PP
HDAC Class-I
class-1.txt 17 gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskel.kkfnvgedcPvfdglfeycqlitGasl 110 g+ hp p+rl+ + + + + g+ ++ i+ +k+a+ ++++++hs +++++k++++++++ k+l +++n +g e + l +G+ + BRADI1G22240.1 39 GKYHPENPERLRAIWKKLGEQGVAERCVIMPAKEAKDKYIASVHSSTHVKLMKSISSKEHNYRRKNLaSNYN---SIYFNEGSSESAFLAAGSVI 130 788****************************************************99887755544313444...233456788999999***** PP class-1.txt 111 eaakkLnkkeadiainwa.GGlhhakkseasGfcyvnDivlailellkk.....hkrvlyididlhhGDgveeafyttdrvmtvsfhkygee.ff 198 e a+k+ +e ai hha ++e Gfc n++ +a ll + k++l +d d+hhG+g ++ fy+ +rv+ s+h+++++ f+ BRADI1G22240.1 131 EVAEKVAAGELSSAIALVrPPGHHAEHNEPMGFCLFNNVAIAANYLLNErpdlgIKKILIVDWDVHHGNGTQKMFYNDSRVLFFSVHRFDHGaFY 225 ********99888887641456*********************9999852333368*********************************974499 PP class-1.txt 199 PgtGdlsd..vgaekgkyyavnvPlkd.gidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksf.nlpll 289 P+ Gd s +g+++g+ y +nvP ++ g+ D y + +v+ +v eaf+P++++l G D+ gD+lg +++ +g+a+ + + f + ++ BRADI1G22240.1 226 PSQGDASHcfIGEGDGQGYNINVPWNHgGCGDADYIAAWDHVLLPVAEAFDPDIILLSAGFDAARGDPLGGCDVTPDGYARLLTKLLGFaKGRMV 320 ******9855699999*********9846******************************************************999999566677 PP class-1.txt 290 vlGGGGYtlrnvaRcwtyetav 311 + GGY++ +a + v BRADI1G22240.1 321 MALEGGYNTVSIANSVLFCAKV 342 7779*****9999876666655 PP
|
Protein Sequence (Fasta) | MAAASAAPAA AGAAHPVGAA PRVGLLYDER MCAHATPDGK YHPENPERLR AIWKKLGEQG 60 VAERCVIMPA KEAKDKYIAS VHSSTHVKLM KSISSKEHNY RRKNLASNYN SIYFNEGSSE 120 SAFLAAGSVI EVAEKVAAGE LSSAIALVRP PGHHAEHNEP MGFCLFNNVA IAANYLLNER 180 PDLGIKKILI VDWDVHHGNG TQKMFYNDSR VLFFSVHRFD HGAFYPSQGD ASHCFIGEGD 240 GQGYNINVPW NHGGCGDADY IAAWDHVLLP VAEAFDPDII LLSAGFDAAR GDPLGGCDVT 300 PDGYARLLTK LLGFAKGRMV MALEGGYNTV SIANSVLFCA KVLLGDQFRL KPPKDSPFDS 360 TWNVIKEVRD ELKTCWPVLR SKLPKNVPLR SSSSYVELYS SSGSECDVED DNERPDANSS 420 VSIIQVDDDV VSERIAMLTL DEDNLATKTT SSCTTDERRA TDSVQAQNDG FVVASTGIYG 480 QSLTWRSALS RVYVWYASFG SNMWKPRFMC YIQGGKVDGM SIACFGSHDT SPPRGAMWKT 540 VPHRLFFGRS STPCWGAGGV AFLNPETNYN EKSWICMYKI TLEQFNDVLF QENRLVKDDN 600 EGGKAESPDS PLIGLSEIES LSSNKALHLE PIKDSWYSNV LYLGQEDSIP ILTMTCPSLD 660 VVRHKAGELP LSPPSDTYSA TLIRGLVEGK QLDANEAASY IDAAAARGL 709Protein Fasta Sequence
>BRADI1G22240.1|Class-I|Brachypodium distachyon MAAASAAPAAAGAAHPVGAAPRVGLLYDERMCAHATPDGKYHPENPERLRAIWKKLGEQGVAERCVIMPAKEAKDKYIASVHSSTHVKLMKSISSKEHNYRRKNLASNYNSIYFNEGSSESAFLAAGSVIEVAEKVAAGELSSAIALVRPPGHHAEHNEPMGFCLFNNVAIAANYLLNERPDLGIKKILIVDWDVHHGNGTQKMFYNDSRVLFFSVHRFDHGAFYPSQGDASHCFIGEGDGQGYNINVPWNHGGCGDADYIAAWDHVLLPVAEAFDPDIILLSAGFDAARGDPLGGCDVTPDGYARLLTKLLGFAKGRMVMALEGGYNTVSIANSVLFCAKVLLGDQFRLKPPKDSPFDSTWNVIKEVRDELKTCWPVLRSKLPKNVPLRSSSSYVELYSSSGSECDVEDDNERPDANSSVSIIQVDDDVVSERIAMLTLDEDNLATKTTSSCTTDERRATDSVQAQNDGFVVASTGIYGQSLTWRSALSRVYVWYASFGSNMWKPRFMCYIQGGKVDGMSIACFGSHDTSPPRGAMWKTVPHRLFFGRSSTPCWGAGGVAFLNPETNYNEKSWICMYKITLEQFNDVLFQENRLVKDDNEGGKAESPDSPLIGLSEIESLSSNKALHLEPIKDSWYSNVLYLGQEDSIPILTMTCPSLDVVRHKAGELPLSPPSDTYSATLIRGLVEGKQLDANEAASYIDAAAARGL
|
Nucleotide Sequence (Fasta) | ATGGCCGCAG CGTCGGCGGC GCCGGCGGCG GCGGGCGCGG CGCATCCGGT GGGTGCAGCG 60 CCCCGGGTGG GGCTGCTGTA CGACGAGAGG ATGTGCGCGC ACGCGACGCC GGACGGGAAG 120 TACCACCCGG AGAACCCCGA GCGGCTGCGG GCCATCTGGA AGAAGCTCGG CGAACAGGGT 180 GTCGCGGAAA GGTGTGTGAT CATGCCGGCG AAGGAAGCCA AGGACAAATA TATAGCTTCA 240 GTCCATAGCT CGACCCATGT AAAACTGATG AAGAGTATTA GCTCGAAGGA ACACAATTAT 300 CGTCGAAAAA ATCTTGCTAG CAACTATAAT TCCATTTACT TCAACGAGGG CTCCTCAGAG 360 TCTGCTTTTC TTGCAGCTGG TTCTGTCATT GAGGTCGCTG AGAAGGTTGC AGCTGGTGAG 420 TTGAGTTCTG CTATCGCTCT CGTCAGACCT CCTGGCCACC ATGCCGAACA TAATGAGCCA 480 ATGGGGTTTT GTCTCTTCAA CAATGTGGCC ATTGCAGCTA ATTATCTCTT AAACGAGAGG 540 CCTGATTTAG GTATCAAGAA GATATTAATC GTCGATTGGG ATGTTCATCA TGGAAATGGT 600 ACACAGAAAA TGTTCTATAA TGACTCTCGT GTATTGTTCT TTTCAGTTCA CAGATTTGAT 660 CATGGAGCTT TCTACCCTAG TCAAGGGGAT GCATCTCACT GTTTCATTGG AGAAGGAGAT 720 GGTCAGGGGT ACAACATTAA TGTGCCCTGG AATCATGGAG GATGCGGCGA TGCAGATTAT 780 ATTGCTGCAT GGGACCATGT GCTGCTTCCC GTCGCAGAAG CATTTGATCC TGATATAATA 840 TTACTGTCTG CTGGGTTTGA TGCAGCGAGG GGTGATCCTC TTGGTGGTTG CGATGTCACG 900 CCAGATGGAT ATGCACGCCT ACTAACAAAG CTGTTAGGTT TTGCAAAAGG AAGGATGGTG 960 ATGGCTCTTG AAGGGGGTTA TAACACAGTG TCCATAGCAA ATTCAGTTTT ATTTTGCGCA 1020 AAAGTTTTGT TGGGAGACCA GTTCAGACTT AAACCTCCAA AGGATTCACC TTTCGATTCT 1080 ACATGGAACG TTATTAAAGA GGTACGTGAT GAATTAAAGA CGTGTTGGCC TGTTTTACGC 1140 AGTAAGCTTC CGAAGAATGT ACCCTTGAGG AGTTCATCCT CATACGTCGA GCTGTACTCT 1200 TCCTCTGGTT CCGAGTGTGA TGTTGAAGAT GATAATGAGC GTCCTGATGC CAATTCATCT 1260 GTCAGTATTA TTCAAGTTGA TGATGATGTT GTAAGTGAGC GCATCGCAAT GTTGACACTT 1320 GATGAAGATA ACCTTGCAAC GAAGACCACA TCAAGTTGCA CAACAGACGA ACGAAGGGCA 1380 ACTGATTCAG TTCAAGCACA AAATGATGGA TTTGTCGTGG CGTCTACAGG AATATATGGC 1440 CAATCTCTTA CTTGGAGATC AGCATTGTCA AGAGTTTATG TTTGGTATGC CAGCTTTGGT 1500 TCAAACATGT GGAAACCAAG GTTCATGTGC TACATTCAAG GGGGGAAGGT TGATGGTATG 1560 AGTATAGCAT GTTTTGGTTC ACATGACACA AGCCCACCAA GAGGTGCCAT GTGGAAGACT 1620 GTGCCTCATA GGTTGTTTTT TGGGAGATCC TCTACCCCTT GCTGGGGTGC TGGTGGCGTT 1680 GCTTTCCTCA ACCCTGAGAC AAACTACAAC GAGAAGTCAT GGATCTGCAT GTACAAAATA 1740 ACGCTCGAGC AGTTTAATGA TGTATTGTTT CAAGAGAACC GTTTAGTTAA GGATGACAAT 1800 GAAGGTGGAA AAGCTGAGTC TCCTGACTCT CCTCTTATTG GCTTGTCCGA AATAGAGTCT 1860 CTCTCTTCAA ACAAAGCTCT TCATCTTGAA CCTATTAAGG ATAGCTGGTA CTCCAATGTA 1920 CTTTATCTTG GACAGGAGGA TTCCATTCCG ATTCTAACTA TGACATGCCC CTCATTAGAT 1980 GTTGTGAGGC ACAAAGCCGG TGAGCTGCCA TTGTCTCCTC CATCGGACAC CTACTCCGCC 2040 ACTCTCATCA GGGGACTCGT GGAAGGGAAG CAGCTGGACG CCAATGAAGC TGCAAGTTAC 2100 ATCGATGCTG CTGCTGCAAG AGGCCTGTGA
2131Nucleotide Fasta Sequence
>BRADI1G22240.1|Class-I|Brachypodium distachyon ATGGCCGCAGCGTCGGCGGCGCCGGCGGCGGCGGGCGCGGCGCATCCGGTGGGTGCAGCGCCCCGGGTGGGGCTGCTGTACGACGAGAGGATGTGCGCGCACGCGACGCCGGACGGGAAGTACCACCCGGAGAACCCCGAGCGGCTGCGGGCCATCTGGAAGAAGCTCGGCGAACAGGGTGTCGCGGAAAGGTGTGTGATCATGCCGGCGAAGGAAGCCAAGGACAAATATATAGCTTCAGTCCATAGCTCGACCCATGTAAAACTGATGAAGAGTATTAGCTCGAAGGAACACAATTATCGTCGAAAAAATCTTGCTAGCAACTATAATTCCATTTACTTCAACGAGGGCTCCTCAGAGTCTGCTTTTCTTGCAGCTGGTTCTGTCATTGAGGTCGCTGAGAAGGTTGCAGCTGGTGAGTTGAGTTCTGCTATCGCTCTCGTCAGACCTCCTGGCCACCATGCCGAACATAATGAGCCAATGGGGTTTTGTCTCTTCAACAATGTGGCCATTGCAGCTAATTATCTCTTAAACGAGAGGCCTGATTTAGGTATCAAGAAGATATTAATCGTCGATTGGGATGTTCATCATGGAAATGGTACACAGAAAATGTTCTATAATGACTCTCGTGTATTGTTCTTTTCAGTTCACAGATTTGATCATGGAGCTTTCTACCCTAGTCAAGGGGATGCATCTCACTGTTTCATTGGAGAAGGAGATGGTCAGGGGTACAACATTAATGTGCCCTGGAATCATGGAGGATGCGGCGATGCAGATTATATTGCTGCATGGGACCATGTGCTGCTTCCCGTCGCAGAAGCATTTGATCCTGATATAATATTACTGTCTGCTGGGTTTGATGCAGCGAGGGGTGATCCTCTTGGTGGTTGCGATGTCACGCCAGATGGATATGCACGCCTACTAACAAAGCTGTTAGGTTTTGCAAAAGGAAGGATGGTGATGGCTCTTGAAGGGGGTTATAACACAGTGTCCATAGCAAATTCAGTTTTATTTTGCGCAAAAGTTTTGTTGGGAGACCAGTTCAGACTTAAACCTCCAAAGGATTCACCTTTCGATTCTACATGGAACGTTATTAAAGAGGTACGTGATGAATTAAAGACGTGTTGGCCTGTTTTACGCAGTAAGCTTCCGAAGAATGTACCCTTGAGGAGTTCATCCTCATACGTCGAGCTGTACTCTTCCTCTGGTTCCGAGTGTGATGTTGAAGATGATAATGAGCGTCCTGATGCCAATTCATCTGTCAGTATTATTCAAGTTGATGATGATGTTGTAAGTGAGCGCATCGCAATGTTGACACTTGATGAAGATAACCTTGCAACGAAGACCACATCAAGTTGCACAACAGACGAACGAAGGGCAACTGATTCAGTTCAAGCACAAAATGATGGATTTGTCGTGGCGTCTACAGGAATATATGGCCAATCTCTTACTTGGAGATCAGCATTGTCAAGAGTTTATGTTTGGTATGCCAGCTTTGGTTCAAACATGTGGAAACCAAGGTTCATGTGCTACATTCAAGGGGGGAAGGTTGATGGTATGAGTATAGCATGTTTTGGTTCACATGACACAAGCCCACCAAGAGGTGCCATGTGGAAGACTGTGCCTCATAGGTTGTTTTTTGGGAGATCCTCTACCCCTTGCTGGGGTGCTGGTGGCGTTGCTTTCCTCAACCCTGAGACAAACTACAACGAGAAGTCATGGATCTGCATGTACAAAATAACGCTCGAGCAGTTTAATGATGTATTGTTTCAAGAGAACCGTTTAGTTAAGGATGACAATGAAGGTGGAAAAGCTGAGTCTCCTGACTCTCCTCTTATTGGCTTGTCCGAAATAGAGTCTCTCTCTTCAAACAAAGCTCTTCATCTTGAACCTATTAAGGATAGCTGGTACTCCAATGTACTTTATCTTGGACAGGAGGATTCCATTCCGATTCTAACTATGACATGCCCCTCATTAGATGTTGTGAGGCACAAAGCCGGTGAGCTGCCATTGTCTCCTCCATCGGACACCTACTCCGCCACTCTCATCAGGGGACTCGTGGAAGGGAAGCAGCTGGACGCCAATGAAGCTGCAAGTTACATCGATGCTGCTGCTGCAAGAGGCCTGTGA
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |