Tag |
Content |
WERAM ID |
WERAM-Php-0085 |
Ensembl Protein ID |
PP1S34_252V6.1 |
Gene Name |
HDA1511 PHYPADRAFT_71876 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HMT |
SET1 |
3.70e-35 |
121.5 |
1257 |
1378 |
HDAC |
Class-I |
1.30e-34 |
121.1 |
9 |
319 |
|
Organism |
Physcomitrella patens |
Domain Profile |
HMT SET1
SET1.txt 1 kelevakskikglglvakkeiekeelviEYvGevirsevadkrekeyekkei....g.vylfrldedaevvvdatkkgniarfinhscepNce 88 k+l v+ks i+ lgl++++ i+++e+v+EYvGe++ + vadkre ey+++++ g +ylfr+d + ++dat+ g+iarf+nhsc+pNc+ PP1S34_152V6.1 1257 KKLAVYKSIIHALGLYTTDFIAEREVVVEYVGEIVGHRVADKREVEYHSRKRlqyqGaCYLFRIDTE--QIIDATRNGGIARFVNHSCSPNCV 1347 6899*****************************************99987543333469********..************************ PP SET1.txt 89 akvvavdgekkiviyakraIekgeeltydYk 119 akv+ v++ kk++ +akr+I++gee+tydYk PP1S34_152V6.1 1348 AKVICVENLKKVIFFAKRNIDAGEEVTYDYK 1378 ******************************7 PP
HDAC Class-I
class-1.txt 7 ydedvgeyhy..gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglf 99 yde++ ++ +++hp +p r++ + + + + g+ + v +++a+ +el+++h+e++i+++++ ++ + + ++ + d+ f++ PP1S34_252V6.1 9 YDERMCAHENvdSDDHPEQPARITSIYQRLKAEGVVDRCVQVDAREATPAELSTVHTEDHISLMQELGHKSFGKKK--RRRLQETFDSIYFNEGS 101 555544433322678**********9999999999999999************************99888776554..45555566888888777 PP class-1.txt 100 eycql.itGasleaakkLnkkead.iainwaGGlhhakkseasGfcyvnDivlailellk.....khkrvlyididlhhGDgveeafyttdrvmt 187 ++l +G+ +e a+++ +++ a hha ++ Gfc +n++ +a l + k+vl +d d+hhG+g ++ f t +vm PP1S34_252V6.1 102 AVAALlAAGSVIEVATQVAEGKLAsGACVIRPPGHHAEADRPMGFCLLNNVAVAAHILAHektelGVKKVLIVDWDVHHGNGTQHMFWTDPQVMY 196 7766515677789999998877541445556667*****************99865554421333469*************************** PP class-1.txt 188 vsfhkygee.ffP.g.tGdlsdvgaekgkyyavnvPl.kdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecv 278 s+h+++++ f+P g G+ ++vg e+gk y +nvP ++ D y ++ k ++ +v + f+P++v++ G Ds gD+lg n++ g+ ++ PP1S34_252V6.1 197 FSVHRFDQGrFYPpGnDGNCTEVGGEEGKGYNINVPWpNKDYGDADYLAVWKYILMPVARQFNPDIVLISAGFDSARGDPLGRCNVTPGGYFQMT 291 ******986366535359******************8456899*************************************************988 PP class-1.txt 279 kfvksf.nlpllvlGGGGYtlrnvaRcw 305 + + + n +++ GGY+l+ ++ + PP1S34_252V6.1 292 RQLMELaNGRVVLALEGGYNLTSISESY 319 7777765888888889*****9999877 PP
|
Protein Sequence (Fasta) | MASRVGLVYD ERMCAHENVD SDDHPEQPAR ITSIYQRLKA EGVVDRCVQV DAREATPAEL 60 STVHTEDHIS LMQELGHKSF GKKKRRRLQE TFDSIYFNEG SAVAALLAAG SVIEVATQVA 120 EGKLASGACV IRPPGHHAEA DRPMGFCLLN NVAVAAHILA HEKTELGVKK VLIVDWDVHH 180 GNGTQHMFWT DPQVMYFSVH RFDQGRFYPP GNDGNCTEVG GEEGKGYNIN VPWPNKDYGD 240 ADYLAVWKYI LMPVARQFNP DIVLISAGFD SARGDPLGRC NVTPGGYFQM TRQLMELANG 300 RVVLALEGGY NLTSISESYL ACMQAMLGDS PVLKVEHDLL PETFPVIKEV RKHLQMYWPI 360 LAEEPLPVPF TPAPSLASKE LEGMVIESLD EDQQWQTPPQ PAIIPITDLI DLLSKLRAWD 420 GSSDIVHDEP TSSTVITSDE KGKKIISSGE LSFAGISGPE DIATVLQLSG ADSSSFAGVS 480 VRPGSSEGDG GAVEDEVATG RMEVESEFLR SPSGTMEGIV NTKAGKEEWN ALGSTRKIVQ 540 NMDESRNELN ASGIDSYRNV SSDLSSSEEA SGAGDIVEPS YMWYACYGSN MWRPRFMCYI 600 QGGKVEGMSR TCIGCRDKSP PLASEWLSIP SRLFFGHEST KMWGLGGVAF IDPVPEAGIL 660 THVRIYKITM EQFNDVLSQE NPGRVERSWM TGRHIAQLKK ESRHFLDIFE DEWYGTVKYL 720 GEKDGLPILT FTCPESHMKK FRSGEFGTFA PPESYRNVIV HGLVEDLGLT EEQAHDYVSS 780 AILPK 785Protein Fasta Sequence
>PP1S34_252V6.1|Class-I|Physcomitrella patens MASRVGLVYDERMCAHENVDSDDHPEQPARITSIYQRLKAEGVVDRCVQVDAREATPAELSTVHTEDHISLMQELGHKSFGKKKRRRLQETFDSIYFNEGSAVAALLAAGSVIEVATQVAEGKLASGACVIRPPGHHAEADRPMGFCLLNNVAVAAHILAHEKTELGVKKVLIVDWDVHHGNGTQHMFWTDPQVMYFSVHRFDQGRFYPPGNDGNCTEVGGEEGKGYNINVPWPNKDYGDADYLAVWKYILMPVARQFNPDIVLISAGFDSARGDPLGRCNVTPGGYFQMTRQLMELANGRVVLALEGGYNLTSISESYLACMQAMLGDSPVLKVEHDLLPETFPVIKEVRKHLQMYWPILAEEPLPVPFTPAPSLASKELEGMVIESLDEDQQWQTPPQPAIIPITDLIDLLSKLRAWDGSSDIVHDEPTSSTVITSDEKGKKIISSGELSFAGISGPEDIATVLQLSGADSSSFAGVSVRPGSSEGDGGAVEDEVATGRMEVESEFLRSPSGTMEGIVNTKAGKEEWNALGSTRKIVQNMDESRNELNASGIDSYRNVSSDLSSSEEASGAGDIVEPSYMWYACYGSNMWRPRFMCYIQGGKVEGMSRTCIGCRDKSPPLASEWLSIPSRLFFGHESTKMWGLGGVAFIDPVPEAGILTHVRIYKITMEQFNDVLSQENPGRVERSWMTGRHIAQLKKESRHFLDIFEDEWYGTVKYLGEKDGLPILTFTCPESHMKKFRSGEFGTFAPPESYRNVIVHGLVEDLGLTEEQAHDYVSSAILPK
|
Nucleotide Sequence (Fasta) | GCTTGATCTT CTTCGCTGCC TCGACGCCGT TTAGACGTCG CTCCGTCCCC CGTCTCCTTC 60 CTTCCTTCCC CCCTGCCATA GATAGCCTAT TCCTCTTGCT GCCATTAGTG CCGATATTTC 120 TCCAGCTCGC AGCACTTGGA TGCCCTCTCT GCTCGGGTTT TTTGCACCCC GTTTTAGCGC 180 GCGCGCGGAT CGCTCCCATG ATCGCGTTCT GATCGTTCGG AAACTCTCGG GATTGCAAGA 240 ATTCGTTGCG TTGGTCGTGG TGGGCACATG GCTTCGCGAG TAGGCCTGGT GTACGATGAG 300 CGCATGTGCG CGCATGAAAA TGTGGACTCC GACGACCATC CTGAGCAGCC GGCTCGAATT 360 ACGTCTATCT ATCAACGTCT CAAGGCGGAG GGAGTCGTGG ACCGATGTGT ACAGGTTGAC 420 GCGCGGGAAG CAACTCCTGC AGAATTGAGC ACAGTGCACA CCGAGGATCA TATTAGCCTT 480 ATGCAGGAGC TTGGTCATAA ATCTTTTGGC AAGAAAAAGC GTAGGCGGCT GCAGGAAACT 540 TTTGATTCGA TTTATTTTAA CGAGGGGTCT GCTGTAGCTG CGCTATTAGC TGCTGGATCA 600 GTTATTGAGG TTGCAACCCA AGTAGCTGAG GGAAAACTGG CATCTGGAGC ATGTGTAATA 660 AGACCACCTG GTCATCATGC GGAGGCCGAT CGACCAATGG GATTTTGCCT TTTGAACAAT 720 GTCGCAGTTG CGGCTCATAT ACTGGCCCAT GAAAAGACAG AACTTGGAGT CAAAAAGGTG 780 CTGATTGTGG ACTGGGACGT GCATCATGGG AATGGTACAC AGCACATGTT TTGGACTGAC 840 CCCCAGGTTA TGTACTTCTC TGTTCACAGA TTTGACCAGG GGAGGTTCTA TCCACCTGGT 900 AATGACGGTA ACTGTACTGA AGTAGGAGGC GAGGAGGGGA AAGGTTACAA CATCAATGTT 960 CCATGGCCAA ACAAAGACTA TGGTGATGCT GACTACTTGG CAGTTTGGAA GTATATTCTC 1020 ATGCCAGTAG CTCGCCAGTT TAACCCAGAC ATAGTTTTGA TCTCAGCTGG TTTTGATTCT 1080 GCCAGAGGAG ATCCTTTGGG TAGGTGTAAC GTTACTCCTG GTGGGTATTT TCAAATGACA 1140 CGACAGTTAA TGGAGTTAGC AAATGGGCGT GTGGTATTAG CCTTGGAAGG TGGCTATAAC 1200 CTCACTTCCA TATCAGAATC CTACTTAGCA TGCATGCAAG CTATGCTAGG CGATTCTCCT 1260 GTGTTAAAGG TTGAACACGA TCTTCTTCCG GAAACATTTC CTGTGATTAA GGAGGTACGG 1320 AAACATCTTC AGATGTATTG GCCTATTCTT GCGGAAGAAC CGTTGCCAGT GCCTTTCACA 1380 CCTGCCCCTA GCTTAGCTTC CAAGGAATTG GAAGGAATGG TTATTGAAAG CTTAGACGAG 1440 GATCAGCAGT GGCAGACTCC TCCACAGCCT GCTATTATAC CCATCACGGA TCTCATTGAT 1500 CTACTGTCTA AGTTAAGAGC CTGGGATGGA AGCTCGGATA TTGTTCATGA TGAACCAACC 1560 AGCTCGACGG TTATAACATC AGATGAAAAG GGGAAAAAGA TTATTTCTTC GGGAGAGCTA 1620 AGCTTTGCGG GAATTTCAGG ACCTGAGGAT ATTGCCACTG TTCTTCAACT GTCCGGAGCT 1680 GATTCATCTT CCTTTGCAGG TGTTTCCGTA AGGCCAGGAA GTAGTGAAGG GGATGGAGGG 1740 GCTGTTGAGG ATGAAGTTGC GACGGGAAGA ATGGAGGTGG AATCAGAATT CTTAAGGAGT 1800 CCGTCTGGTA CGATGGAAGG AATCGTCAAC ACAAAGGCTG GTAAAGAAGA GTGGAACGCA 1860 TTGGGAAGCA CACGAAAAAT AGTTCAAAAC ATGGACGAAT CTAGAAATGA GTTGAATGCC 1920 TCAGGAATTG ATTCTTATCG AAATGTTTCC AGTGACTTGA GCAGTTCAGA AGAAGCCTCT 1980 GGTGCTGGTG ATATAGTGGA ACCTAGCTAT ATGTGGTACG CTTGTTATGG ATCTAACATG 2040 TGGAGGCCAC GGTTTATGTG CTACATACAA GGAGGAAAGG TAGAAGGCAT GTCGAGAACG 2100 TGCATCGGAT GCAGAGACAA GTCACCTCCT CTGGCTTCAG AATGGCTATC CATCCCTAGT 2160 CGCTTGTTCT TTGGACATGA GAGCACGAAA ATGTGGGGTT TGGGAGGAGT TGCGTTTATT 2220 GATCCTGTTC CCGAAGCTGG TATTCTTACT CATGTTCGAA TTTACAAAAT CACGATGGAG 2280 CAATTCAATG ACGTTCTTAG CCAAGAAAAT CCTGGCAGAG TTGAGAGATC ATGGATGACT 2340 GGTAGGCATA TTGCGCAATT GAAGAAGGAA TCTCGTCACT TTTTGGATAT TTTTGAGGAC 2400 GAGTGGTATG GAACTGTGAA ATACCTCGGG GAGAAAGACG GTCTTCCAAT TTTAACCTTC 2460 ACGTGTCCGG AATCTCACAT GAAGAAATTC AGATCTGGGG AATTCGGTAC TTTTGCTCCT 2520 CCGGAGTCCT ATCGAAATGT GATAGTCCAT GGCCTTGTGG AGGATTTGGG TCTCACTGAG 2580 GAGCAAGCCC ATGACTATGT GTCATCGGCT ATACTGCCTA AGTAG
2626Nucleotide Fasta Sequence
>PP1S34_252V6.1|Class-I|Physcomitrella patens GCTTGATCTTCTTCGCTGCCTCGACGCCGTTTAGACGTCGCTCCGTCCCCCGTCTCCTTCCTTCCTTCCCCCCTGCCATAGATAGCCTATTCCTCTTGCTGCCATTAGTGCCGATATTTCTCCAGCTCGCAGCACTTGGATGCCCTCTCTGCTCGGGTTTTTTGCACCCCGTTTTAGCGCGCGCGCGGATCGCTCCCATGATCGCGTTCTGATCGTTCGGAAACTCTCGGGATTGCAAGAATTCGTTGCGTTGGTCGTGGTGGGCACATGGCTTCGCGAGTAGGCCTGGTGTACGATGAGCGCATGTGCGCGCATGAAAATGTGGACTCCGACGACCATCCTGAGCAGCCGGCTCGAATTACGTCTATCTATCAACGTCTCAAGGCGGAGGGAGTCGTGGACCGATGTGTACAGGTTGACGCGCGGGAAGCAACTCCTGCAGAATTGAGCACAGTGCACACCGAGGATCATATTAGCCTTATGCAGGAGCTTGGTCATAAATCTTTTGGCAAGAAAAAGCGTAGGCGGCTGCAGGAAACTTTTGATTCGATTTATTTTAACGAGGGGTCTGCTGTAGCTGCGCTATTAGCTGCTGGATCAGTTATTGAGGTTGCAACCCAAGTAGCTGAGGGAAAACTGGCATCTGGAGCATGTGTAATAAGACCACCTGGTCATCATGCGGAGGCCGATCGACCAATGGGATTTTGCCTTTTGAACAATGTCGCAGTTGCGGCTCATATACTGGCCCATGAAAAGACAGAACTTGGAGTCAAAAAGGTGCTGATTGTGGACTGGGACGTGCATCATGGGAATGGTACACAGCACATGTTTTGGACTGACCCCCAGGTTATGTACTTCTCTGTTCACAGATTTGACCAGGGGAGGTTCTATCCACCTGGTAATGACGGTAACTGTACTGAAGTAGGAGGCGAGGAGGGGAAAGGTTACAACATCAATGTTCCATGGCCAAACAAAGACTATGGTGATGCTGACTACTTGGCAGTTTGGAAGTATATTCTCATGCCAGTAGCTCGCCAGTTTAACCCAGACATAGTTTTGATCTCAGCTGGTTTTGATTCTGCCAGAGGAGATCCTTTGGGTAGGTGTAACGTTACTCCTGGTGGGTATTTTCAAATGACACGACAGTTAATGGAGTTAGCAAATGGGCGTGTGGTATTAGCCTTGGAAGGTGGCTATAACCTCACTTCCATATCAGAATCCTACTTAGCATGCATGCAAGCTATGCTAGGCGATTCTCCTGTGTTAAAGGTTGAACACGATCTTCTTCCGGAAACATTTCCTGTGATTAAGGAGGTACGGAAACATCTTCAGATGTATTGGCCTATTCTTGCGGAAGAACCGTTGCCAGTGCCTTTCACACCTGCCCCTAGCTTAGCTTCCAAGGAATTGGAAGGAATGGTTATTGAAAGCTTAGACGAGGATCAGCAGTGGCAGACTCCTCCACAGCCTGCTATTATACCCATCACGGATCTCATTGATCTACTGTCTAAGTTAAGAGCCTGGGATGGAAGCTCGGATATTGTTCATGATGAACCAACCAGCTCGACGGTTATAACATCAGATGAAAAGGGGAAAAAGATTATTTCTTCGGGAGAGCTAAGCTTTGCGGGAATTTCAGGACCTGAGGATATTGCCACTGTTCTTCAACTGTCCGGAGCTGATTCATCTTCCTTTGCAGGTGTTTCCGTAAGGCCAGGAAGTAGTGAAGGGGATGGAGGGGCTGTTGAGGATGAAGTTGCGACGGGAAGAATGGAGGTGGAATCAGAATTCTTAAGGAGTCCGTCTGGTACGATGGAAGGAATCGTCAACACAAAGGCTGGTAAAGAAGAGTGGAACGCATTGGGAAGCACACGAAAAATAGTTCAAAACATGGACGAATCTAGAAATGAGTTGAATGCCTCAGGAATTGATTCTTATCGAAATGTTTCCAGTGACTTGAGCAGTTCAGAAGAAGCCTCTGGTGCTGGTGATATAGTGGAACCTAGCTATATGTGGTACGCTTGTTATGGATCTAACATGTGGAGGCCACGGTTTATGTGCTACATACAAGGAGGAAAGGTAGAAGGCATGTCGAGAACGTGCATCGGATGCAGAGACAAGTCACCTCCTCTGGCTTCAGAATGGCTATCCATCCCTAGTCGCTTGTTCTTTGGACATGAGAGCACGAAAATGTGGGGTTTGGGAGGAGTTGCGTTTATTGATCCTGTTCCCGAAGCTGGTATTCTTACTCATGTTCGAATTTACAAAATCACGATGGAGCAATTCAATGACGTTCTTAGCCAAGAAAATCCTGGCAGAGTTGAGAGATCATGGATGACTGGTAGGCATATTGCGCAATTGAAGAAGGAATCTCGTCACTTTTTGGATATTTTTGAGGACGAGTGGTATGGAACTGTGAAATACCTCGGGGAGAAAGACGGTCTTCCAATTTTAACCTTCACGTGTCCGGAATCTCACATGAAGAAATTCAGATCTGGGGAATTCGGTACTTTTGCTCCTCCGGAGTCCTATCGAAATGTGATAGTCCATGGCCTTGTGGAGGATTTGGGTCTCACTGAGGAGCAAGCCCATGACTATGTGTCATCGGCTATACTGCCTAAGTAG
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |