Tag |
Content |
WERAM ID |
WERAM-Orbr-0087 |
Ensembl Protein ID |
OB07G26850.1 |
Gene Name |
|
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
1.20e-125 |
419.7 |
11 |
333 |
HDAC |
Class-I |
2.50e-39 |
136.4 |
27 |
324 |
|
Organism |
Oryza brachyantha |
Domain Profile |
HDAC Class-II
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletae.klekeelesltvdsdsiylesk 97 +gl+yde+m++h+++ +++ hpEkpeR++ai+++l++ g++++++ +ka++a+++++++vHs++h++l+++ + k +++ ++++++ +siy+++ OB07G26850.1 11 VGLLYDERMCAHATPDGED--HPEKPERLRAIWRKLSADGVVSRCMIMKAKEAEDKHIASVHSKNHIKLIRSISsKEYDSRRNKIAKRLNSIYFNKG 105 5799************999..***************************************************998888999999************* PP class-2.txt 98 sikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklk...vkkilivDwDvHhGnGtqeifykdpkvlyl 191 s+++a la+G+v+e+++kv++gel+ ++a+vRPPGHHae+++amGFClfnnvavaa +l+++ + +kkilivDwDvHhGnGtq++fy+dp+vl++ OB07G26850.1 106 SSESAFLAAGSVIEVAEKVAAGELRSAIALVRPPGHHAEHNEAMGFCLFNNVAVAADYLLNERAdlgIKKILIVDWDVHHGNGTQKMFYDDPRVLFF 202 ***********************************************************99877777****************************** PP class-2.txt 192 SlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgglsvtakcyatltkql 288 S+HR+d gsf+p+ g++++ +geg+g+g+n+Nv+w++g +gda+y+aa+++v+lp+a+ F+Pd++lvsaGfDaa gdplgg+++t+++ya l +l OB07G26850.1 203 SVHRFDYGSFYPAEGDASYCFIGEGAGKGYNINVPWEHGRCGDADYIAAWDHVLLPVAEAFDPDIILVSAGFDAALGDPLGGCCITPNGYALLLTKL 299 ************************************************************************************************* PP class-2.txt 289 lklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322 l++a+gr+v++lEGGynl++ia++v+a++k+Llg OB07G26850.1 300 LGFAQGRIVMALEGGYNLRSIANSVSACAKVLLG 333 ********************************96 PP
HDAC Class-I
class-1.txt 17 gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskel.kkfnvgedcPvfdglfeycqlitGaslea 112 g++hp kp+rl+ + + + g+ + i+k+k+a+ ++++++hs+++i++++++++++ ++ +++ k+ n +g e + l +G+ +e OB07G26850.1 27 GEDHPEKPERLRAIWRKLSADGVVSRCMIMKAKEAEDKHIASVHSKNHIKLIRSISSKEYDSRRNKIaKRLN---SIYFNKGSSESAFLAAGSVIEV 120 889**********999999999999999****************************9998876654404444...334556788899999******* PP class-1.txt 113 akkLnkkeadiainwa.GGlhhakkseasGfcyvnDivlailellkk.....hkrvlyididlhhGDgveeafyttdrvmtvsfhkyge.effPgtG 202 a+k+ +e ai hha ++ea Gfc n++ +a ll + k++l +d d+hhG+g ++ fy rv+ s+h+++ +f+P+ G OB07G26850.1 121 AEKVAAGELRSAIALVrPPGHHAEHNEAMGFCLFNNVAVAADYLLNEradlgIKKILIVDWDVHHGNGTQKMFYDDPRVLFFSVHRFDYgSFYPAEG 217 ******99888887641456********************99998742333369********************************98525****** PP class-1.txt 203 dlsd..vgaekgkyyavnvPlkdg.idDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksf.nlpllvlGGGG 295 d s +g++ gk y +nvP ++g + D y + +v+ +v eaf+P+++++ G D+ gD+lg ++ +g+a + + f + +++ GG OB07G26850.1 218 DASYcfIGEGAGKGYNINVPWEHGrCGDADYIAAWDHVLLPVAEAFDPDIILVSAGFDAALGDPLGGCCITPNGYALLLTKLLGFaQGRIVMALEGG 314 *9863479999************9899**************************************************999999996778888889** PP class-1.txt 296 YtlrnvaRcw 305 Y+lr +a OB07G26850.1 315 YNLRSIANSV 324 ****999765 PP
|
Protein Sequence (Fasta) | MAAAMAAAGG VGLLYDERMC AHATPDGEDH PEKPERLRAI WRKLSADGVV SRCMIMKAKE 60 AEDKHIASVH SKNHIKLIRS ISSKEYDSRR NKIAKRLNSI YFNKGSSESA FLAAGSVIEV 120 AEKVAAGELR SAIALVRPPG HHAEHNEAMG FCLFNNVAVA ADYLLNERAD LGIKKILIVD 180 WDVHHGNGTQ KMFYDDPRVL FFSVHRFDYG SFYPAEGDAS YCFIGEGAGK GYNINVPWEH 240 GRCGDADYIA AWDHVLLPVA EAFDPDIILV SAGFDAALGD PLGGCCITPN GYALLLTKLL 300 GFAQGRIVMA LEGGYNLRSI ANSVSACAKV LLGDKFRYDA PDMQPFESSW RVIQAVRDEL 360 KTLWPVLSSR LPENVSLRSR PTQTELYSSS GSESDVEELP DAIASVNFIQ ITDGVISESL 420 SRLRLDEDKI ATTATSSNIT VEQSPADLAE PQNVGSTAVS KEIPSLSWRS ELSKVYVWYA 480 SFGSNMWTPR FLCYIQGGKA EGMNIPCFGS HDPSPPCGTM WKTVPHRLFF GRSSTPCWGI 540 GGVAFLNPEI NDSENSYVCM YKITLEQFND VLFQENRLVK ENNESGKTES PNSPLIGLSE 600 IEFVSSNKAV HLAPIKDSWY SNVLYLGEED KLPILTMTCP SSDVERCKSG ELPLSPPSKT 660 YATTLIKGLV EGKHLDSDAA TSYINAAATR GL 692Protein Fasta Sequence
>OB07G26850.1|Class-I|Oryza brachyantha MAAAMAAAGGVGLLYDERMCAHATPDGEDHPEKPERLRAIWRKLSADGVVSRCMIMKAKEAEDKHIASVHSKNHIKLIRSISSKEYDSRRNKIAKRLNSIYFNKGSSESAFLAAGSVIEVAEKVAAGELRSAIALVRPPGHHAEHNEAMGFCLFNNVAVAADYLLNERADLGIKKILIVDWDVHHGNGTQKMFYDDPRVLFFSVHRFDYGSFYPAEGDASYCFIGEGAGKGYNINVPWEHGRCGDADYIAAWDHVLLPVAEAFDPDIILVSAGFDAALGDPLGGCCITPNGYALLLTKLLGFAQGRIVMALEGGYNLRSIANSVSACAKVLLGDKFRYDAPDMQPFESSWRVIQAVRDELKTLWPVLSSRLPENVSLRSRPTQTELYSSSGSESDVEELPDAIASVNFIQITDGVISESLSRLRLDEDKIATTATSSNITVEQSPADLAEPQNVGSTAVSKEIPSLSWRSELSKVYVWYASFGSNMWTPRFLCYIQGGKAEGMNIPCFGSHDPSPPCGTMWKTVPHRLFFGRSSTPCWGIGGVAFLNPEINDSENSYVCMYKITLEQFNDVLFQENRLVKENNESGKTESPNSPLIGLSEIEFVSSNKAVHLAPIKDSWYSNVLYLGEEDKLPILTMTCPSSDVERCKSGELPLSPPSKTYATTLIKGLVEGKHLDSDAATSYINAAATRGL
|
Nucleotide Sequence (Fasta) | TTCCGAGTCG TCGTCTCGCG CCGGCGCGGG ATGGCGGCGG CGATGGCGGC GGCGGGCGGG 60 GTGGGGCTGC TCTACGACGA GAGGATGTGC GCGCACGCGA CGCCGGACGG GGAAGACCAC 120 CCGGAGAAGC CCGAGAGGCT GCGGGCCATC TGGCGCAAGC TCTCCGCCGA CGGCGTCGTC 180 TCCAGGTGCA TGATCATGAA AGCGAAGGAG GCTGAGGACA AGCATATAGC TTCTGTCCAT 240 AGCAAGAACC ATATCAAGCT GATAAGGAGT ATCAGCTCAA AAGAATATGA TTCCCGTCGA 300 AACAAGATTG CTAAGAGACT CAATTCCATT TACTTCAACA AGGGCTCCTC GGAGTCTGCT 360 TTTCTTGCAG CTGGTTCTGT GATTGAGGTA GCTGAGAAGG TGGCTGCAGG TGAGTTAAGG 420 TCTGCTATTG CTCTAGTCAG ACCTCCAGGC CACCATGCTG AACATAATGA GGCAATGGGT 480 TTTTGCCTGT TCAACAATGT AGCAGTTGCT GCTGATTATC TCTTAAATGA GAGGGCTGAC 540 TTAGGTATCA AGAAGATATT GATTGTCGAT TGGGATGTTC ATCATGGAAA TGGCACACAA 600 AAGATGTTTT ATGACGACCC TCGTGTATTG TTCTTTTCAG TTCATAGATT TGATTACGGA 660 AGCTTCTATC CTGCGGAAGG CGATGCATCT TACTGTTTCA TTGGGGAAGG AGCTGGTAAA 720 GGGTACAATA TTAATGTGCC CTGGGAACAT GGAAGATGTG GTGATGCAGA TTATATTGCT 780 GCATGGGACC ACGTACTGCT TCCTGTTGCT GAAGCATTTG ACCCTGATAT AATCTTGGTG 840 TCTGCTGGGT TCGATGCAGC ATTGGGTGAT CCTCTTGGTG GTTGCTGCAT CACTCCAAAT 900 GGATATGCTC TGCTACTGAC CAAGCTGTTA GGTTTTGCTC AAGGGAGGAT AGTGATGGCT 960 CTTGAAGGAG GCTATAACCT TAGATCCATA GCAAATTCAG TTAGTGCTTG TGCTAAAGTT 1020 TTGTTGGGAG ATAAATTCAG ATATGACGCT CCTGATATGC AACCATTTGA ATCTTCATGG 1080 AGAGTTATAC AAGCGGTACG TGATGAACTG AAGACACTCT GGCCTGTTCT GAGTAGTAGA 1140 TTGCCAGAGA ATGTATCATT GAGGAGTAGA CCCACACAAA CTGAGCTGTA TTCTTCCTCT 1200 GGTTCTGAGT CTGATGTTGA AGAGCTCCCT GATGCTATTG CATCTGTCAA TTTTATTCAA 1260 ATTACTGATG GTGTTATAAG TGAAAGCCTC TCGAGGTTGA GACTTGATGA AGACAAAATT 1320 GCAACGACAG CCACCTCAAG TAACATAACA GTTGAACAAA GTCCAGCTGA TTTAGCTGAA 1380 CCACAAAATG TTGGATCTAC TGCAGTCTCT AAAGAAATAC CATCTCTATC TTGGAGATCA 1440 GAACTATCAA AAGTATATGT TTGGTATGCC AGCTTTGGTT CAAACATGTG GACACCAAGG 1500 TTTTTATGCT ACATTCAAGG GGGAAAGGCT GAGGGTATGA ATATACCATG TTTTGGATCG 1560 CATGATCCAA GCCCACCATG TGGTACCATG TGGAAGACTG TACCTCATCG ATTGTTTTTT 1620 GGTAGATCTT CTACCCCCTG CTGGGGAATT GGTGGTGTTG CTTTTCTCAA CCCTGAGATA 1680 AACGACTCTG AAAACTCCTA TGTCTGCATG TACAAAATAA CGCTTGAGCA GTTCAATGAT 1740 GTATTGTTTC AAGAGAATCG TTTAGTGAAG GAGAACAATG AAAGCGGAAA AACTGAATCT 1800 CCTAACTCTC CTCTGATTGG CTTATCTGAA ATAGAGTTTG TTTCCAGCAA CAAAGCTGTC 1860 CATCTTGCAC CAATTAAGGA TAGCTGGTAC TCCAATGTGC TTTACCTTGG CGAGGAAGAT 1920 AAACTTCCAA TTCTTACAAT GACGTGCCCC TCATCAGACG TAGAGCGATG CAAATCCGGT 1980 GAGCTGCCAT TGTCTCCTCC ATCGAAGACC TACGCCACCA CCCTGATAAA GGGACTGGTG 2040 GAAGGGAAGC ACCTGGATTC TGACGCCGCC ACTAGCTACA TCAACGCTGC AGCCACCAGA 2100 GGCCTGTGAA CGCTGCTTCA CTCCGCCCTG TGTGAATTGT GATTTGTACA GCCAGTAGGA 2160 GTCTACGACT GTAGGAGCAA GGTTTGCGAA ACTGTAAAAG ATAGTGCTTG TTGATTCTGG 2220 ACGACCATGG GAGCCGTCTG TAGAGGTCTC ATGTCCTGCC AATTGGGGGA ACTGTGAGTC 2280 TACCCGATCA AGTTCCCTAG GATCGTTGAG AATCTTTAGC TAGCGCTTAT ACCTCGGTTT 2340 GGTCATTCTC TCATTTGGTG CTCTCCCGGG ATTGGTTTGT GGTGGGTTGG TGTGGAGAAA 2400 CACACACTAG TTGCAACTTT GCAGGTTGCA AATAGATGGT ATGCATTTTG CCAGTGC
2458Nucleotide Fasta Sequence
>OB07G26850.1|Class-I|Oryza brachyantha TTCCGAGTCGTCGTCTCGCGCCGGCGCGGGATGGCGGCGGCGATGGCGGCGGCGGGCGGGGTGGGGCTGCTCTACGACGAGAGGATGTGCGCGCACGCGACGCCGGACGGGGAAGACCACCCGGAGAAGCCCGAGAGGCTGCGGGCCATCTGGCGCAAGCTCTCCGCCGACGGCGTCGTCTCCAGGTGCATGATCATGAAAGCGAAGGAGGCTGAGGACAAGCATATAGCTTCTGTCCATAGCAAGAACCATATCAAGCTGATAAGGAGTATCAGCTCAAAAGAATATGATTCCCGTCGAAACAAGATTGCTAAGAGACTCAATTCCATTTACTTCAACAAGGGCTCCTCGGAGTCTGCTTTTCTTGCAGCTGGTTCTGTGATTGAGGTAGCTGAGAAGGTGGCTGCAGGTGAGTTAAGGTCTGCTATTGCTCTAGTCAGACCTCCAGGCCACCATGCTGAACATAATGAGGCAATGGGTTTTTGCCTGTTCAACAATGTAGCAGTTGCTGCTGATTATCTCTTAAATGAGAGGGCTGACTTAGGTATCAAGAAGATATTGATTGTCGATTGGGATGTTCATCATGGAAATGGCACACAAAAGATGTTTTATGACGACCCTCGTGTATTGTTCTTTTCAGTTCATAGATTTGATTACGGAAGCTTCTATCCTGCGGAAGGCGATGCATCTTACTGTTTCATTGGGGAAGGAGCTGGTAAAGGGTACAATATTAATGTGCCCTGGGAACATGGAAGATGTGGTGATGCAGATTATATTGCTGCATGGGACCACGTACTGCTTCCTGTTGCTGAAGCATTTGACCCTGATATAATCTTGGTGTCTGCTGGGTTCGATGCAGCATTGGGTGATCCTCTTGGTGGTTGCTGCATCACTCCAAATGGATATGCTCTGCTACTGACCAAGCTGTTAGGTTTTGCTCAAGGGAGGATAGTGATGGCTCTTGAAGGAGGCTATAACCTTAGATCCATAGCAAATTCAGTTAGTGCTTGTGCTAAAGTTTTGTTGGGAGATAAATTCAGATATGACGCTCCTGATATGCAACCATTTGAATCTTCATGGAGAGTTATACAAGCGGTACGTGATGAACTGAAGACACTCTGGCCTGTTCTGAGTAGTAGATTGCCAGAGAATGTATCATTGAGGAGTAGACCCACACAAACTGAGCTGTATTCTTCCTCTGGTTCTGAGTCTGATGTTGAAGAGCTCCCTGATGCTATTGCATCTGTCAATTTTATTCAAATTACTGATGGTGTTATAAGTGAAAGCCTCTCGAGGTTGAGACTTGATGAAGACAAAATTGCAACGACAGCCACCTCAAGTAACATAACAGTTGAACAAAGTCCAGCTGATTTAGCTGAACCACAAAATGTTGGATCTACTGCAGTCTCTAAAGAAATACCATCTCTATCTTGGAGATCAGAACTATCAAAAGTATATGTTTGGTATGCCAGCTTTGGTTCAAACATGTGGACACCAAGGTTTTTATGCTACATTCAAGGGGGAAAGGCTGAGGGTATGAATATACCATGTTTTGGATCGCATGATCCAAGCCCACCATGTGGTACCATGTGGAAGACTGTACCTCATCGATTGTTTTTTGGTAGATCTTCTACCCCCTGCTGGGGAATTGGTGGTGTTGCTTTTCTCAACCCTGAGATAAACGACTCTGAAAACTCCTATGTCTGCATGTACAAAATAACGCTTGAGCAGTTCAATGATGTATTGTTTCAAGAGAATCGTTTAGTGAAGGAGAACAATGAAAGCGGAAAAACTGAATCTCCTAACTCTCCTCTGATTGGCTTATCTGAAATAGAGTTTGTTTCCAGCAACAAAGCTGTCCATCTTGCACCAATTAAGGATAGCTGGTACTCCAATGTGCTTTACCTTGGCGAGGAAGATAAACTTCCAATTCTTACAATGACGTGCCCCTCATCAGACGTAGAGCGATGCAAATCCGGTGAGCTGCCATTGTCTCCTCCATCGAAGACCTACGCCACCACCCTGATAAAGGGACTGGTGGAAGGGAAGCACCTGGATTCTGACGCCGCCACTAGCTACATCAACGCTGCAGCCACCAGAGGCCTGTGAACGCTGCTTCACTCCGCCCTGTGTGAATTGTGATTTGTACAGCCAGTAGGAGTCTACGACTGTAGGAGCAAGGTTTGCGAAACTGTAAAAGATAGTGCTTGTTGATTCTGGACGACCATGGGAGCCGTCTGTAGAGGTCTCATGTCCTGCCAATTGGGGGAACTGTGAGTCTACCCGATCAAGTTCCCTAGGATCGTTGAGAATCTTTAGCTAGCGCTTATACCTCGGTTTGGTCATTCTCTCATTTGGTGCTCTCCCGGGATTGGTTTGTGGTGGGTTGGTGTGGAGAAACACACACTAGTTGCAACTTTGCAGGTTGCAAATAGATGGTATGCATTTTGCCAGTGC
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |