Tag |
Content |
WERAM ID |
WERAM-Met-0113 |
Ensembl Protein ID |
KEH32089 |
Gene Name |
MTR_4g111985 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
1.80e-115 |
387.1 |
197 |
509 |
HDAC |
Class-I |
1.80e-32 |
114.6 |
241 |
502 |
|
Organism |
Medicago truncatula |
Domain Profile |
HDAC Class-II
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeaglle.kleelkarkatkeelqlvHseehvelletaeklekeelesltvdsdsiylesks 98 +++ +de+ml h+ +e +++ hpE+p+R++ai +l++ag+ + +++++ ar+ t+eel++vHs+eh+e +e ++kl ++ + ++y++++s KEH32089 197 TAIGFDERMLLHAEVEMKSRPHPERPDRLRAIAASLARAGIFPgRCHSIPAREITQEELMMVHSSEHIESVEVTSKLMSSYFT------SDTYANEHS 288 6789***********************************999779*****************************666655554......378****** PP class-2.txt 99 ikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkilivDwDvHhGnGtqeifykdpkvlylSlHRy 196 + aarla+G + +l+++v++g++kngfa+vRPPGHHa + mGFCl+nn+avaa +q + +k+li+DwDvHhGnGtqeif+++++vly+SlHR+ KEH32089 289 ACAARLAAGLCADLASAVVSGRAKNGFALVRPPGHHAGVKDVMGFCLHNNAAVAALAAQAAGA-RKVLILDWDVHHGNGTQEIFEQNKSVLYISLHRH 385 ******************************************************988777665.********************************** PP class-2.txt 197 dkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgglsvtakcyatltkqllklagg 294 ++g+f+p g+g ++evg +eg+ vN++w+ g++gd++y++af++vvlpia+eF+Pd+ ++saGfDaa+gdplgg+++t+++ya++t++l l+gg KEH32089 386 EDGTFYP--GTGGAHEVGYMGAEGYCVNIPWSRGGVGDNDYIFAFQNVVLPIASEFAPDFTIISAGFDAARGDPLGGCDITPSGYAQMTHMLNALSGG 481 *******..***************************************************************************************** PP class-2.txt 295 rvvlvlEGGynlkaiaeaveavvkaLlg 322 +++++lEGGynl++i++++++v+k+Llg KEH32089 482 KMLVILEGGYNLRSISSSATSVIKVLLG 509 **************************96 PP
HDAC Class-I
class-1.txt 42 kleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakksea 139 + + + +++ ++eel+ +hs e+ie ++ v+++ ++++ ++ ++ ++ + c+ + a +++ ++ a+ G hha ++ KEH32089 241 RCHSIPAREITQEELMMVHSSEHIESVE-VTSKLMSSYF-TSDTYANEHSACAARLAAGLCADLASAVVSGR-----AKNGFALVRPPG-HHAGVKDV 330 5555566666677777777777776664.4444455444.34445555544444444555555555544443.....334455555555.9999999* PP class-1.txt 140 sGfcyvnDivlailellk.khkrvlyididlhhGDgveeafyttdrvmtvsfhkygee.ffPgtGdlsdvgaekgkyyavnvPl.kdgidDesyekif 234 Gfc n+ +a l + ++vl +d d+hhG+g +e f++ + v+ +s+h+++++ f+PgtG ++vg y+vn+P + g+ D+ y f KEH32089 331 MGFCLHNNAAVAALAAQAaGARKVLILDWDVHHGNGTQEIFEQNKSVLYISLHRHEDGtFYPGTGGAHEVGYMGAEGYCVNIPWsRGGVGDNDYIFAF 428 ********999999888747899********************************985499**********************83568********** PP class-1.txt 235 ksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksf.nlpllvlGGGGYtlrnvaRcwty 307 ++v+ ++ + f P+ ++ G D+ gD+lg +++ +g+a++ +++ ++lv+ GGY+lr ++ t KEH32089 429 QNVVLPIASEFAPDFTIISAGFDAARGDPLGGCDITPSGYAQMTHMLNALsGGKMLVILEGGYNLRSISSSATS 502 *************************************************97789************99976665 PP
|
Protein Sequence (Fasta) | MKATINQADE LDAAEAMPPP NSKRVRVKKE LTFQDMYQNQ DLFDQDDDED DDWDPSQKQA 60 DDGVAQTAVS DSIHEVSEAN PQPNAKRVKV QKELTFQDLY QSQELFDEDD EEDDDWDPTQ 120 LQKCLEVIKW FCKNCTMDNL NNDVCCQICG EHKDSKILSR GHFASRFAQD EDPNEIQPSI 180 KRLKDVDSLE SAANSSTAIG FDERMLLHAE VEMKSRPHPE RPDRLRAIAA SLARAGIFPG 240 RCHSIPAREI TQEELMMVHS SEHIESVEVT SKLMSSYFTS DTYANEHSAC AARLAAGLCA 300 DLASAVVSGR AKNGFALVRP PGHHAGVKDV MGFCLHNNAA VAALAAQAAG ARKVLILDWD 360 VHHGNGTQEI FEQNKSVLYI SLHRHEDGTF YPGTGGAHEV GYMGAEGYCV NIPWSRGGVG 420 DNDYIFAFQN VVLPIASEFA PDFTIISAGF DAARGDPLGG CDITPSGYAQ MTHMLNALSG 480 GKMLVILEGG YNLRSISSSA TSVIKVLLGE SPVCELENSF PTKSGLQTVF EVLDIQNNFW 540 PSLKPIFKNV MSLWEMQCLG KKGKQTKKRR RILAPMWWRW SRRSFLFHML NGHRRVKSK 599Protein Fasta Sequence
>KEH32089|Class-I|Medicago truncatula MKATINQADELDAAEAMPPPNSKRVRVKKELTFQDMYQNQDLFDQDDDEDDDWDPSQKQADDGVAQTAVSDSIHEVSEANPQPNAKRVKVQKELTFQDLYQSQELFDEDDEEDDDWDPTQLQKCLEVIKWFCKNCTMDNLNNDVCCQICGEHKDSKILSRGHFASRFAQDEDPNEIQPSIKRLKDVDSLESAANSSTAIGFDERMLLHAEVEMKSRPHPERPDRLRAIAASLARAGIFPGRCHSIPAREITQEELMMVHSSEHIESVEVTSKLMSSYFTSDTYANEHSACAARLAAGLCADLASAVVSGRAKNGFALVRPPGHHAGVKDVMGFCLHNNAAVAALAAQAAGARKVLILDWDVHHGNGTQEIFEQNKSVLYISLHRHEDGTFYPGTGGAHEVGYMGAEGYCVNIPWSRGGVGDNDYIFAFQNVVLPIASEFAPDFTIISAGFDAARGDPLGGCDITPSGYAQMTHMLNALSGGKMLVILEGGYNLRSISSSATSVIKVLLGESPVCELENSFPTKSGLQTVFEVLDIQNNFWPSLKPIFKNVMSLWEMQCLGKKGKQTKKRRRILAPMWWRWSRRSFLFHMLNGHRRVKSK
|
Nucleotide Sequence (Fasta) | ATGAAAGCTA CTATTAATCA AGCTGATGAA CTCGATGCTG CTGAGGCTAT GCCACCGCCT 60 AATTCCAAAA GGGTCAGGGT CAAAAAAGAA CTAACTTTTC AAGATATGTA TCAAAACCAA 120 GACTTGTTTG ATCAGGATGA TGATGAGGAC GATGATTGGG ACCCTTCTCA GAAGCAAGCT 180 GATGATGGAG TTGCTCAGAC TGCTGTTTCC GATTCCATCC ATGAAGTTTC AGAAGCCAAT 240 CCACAGCCTA ATGCTAAAAG GGTTAAGGTG CAAAAGGAAC TAACTTTTCA GGACCTGTAT 300 CAAAGCCAAG AGTTGTTTGA CGAGGATGAT GAGGAGGACG ATGATTGGGA CCCAACTCAG 360 TTGCAGAAGT GTCTCGAAGT CATCAAGTGG TTCTGTAAAA ATTGTACTAT GGATAACCTA 420 AACAATGATG TCTGTTGTCA AATATGTGGG GAGCATAAAG ATTCTAAAAT CCTGAGCCGT 480 GGGCATTTTG CATCTCGCTT TGCACAAGAT GAAGATCCAA ATGAGATCCA GCCAAGTATA 540 AAAAGACTGA AAGATGTTGA CTCACTGGAA TCTGCAGCAA ACAGTTCTAC GGCAATTGGC 600 TTTGATGAAA GAATGTTGTT ACATGCAGAA GTTGAAATGA AATCACGTCC ACACCCCGAA 660 AGGCCAGATC GACTTCGAGC AATTGCTGCT AGTCTTGCCA GAGCTGGTAT ATTTCCAGGA 720 AGATGCCATT CAATTCCTGC TAGAGAAATC ACTCAAGAAG AACTGATGAT GGTTCATTCT 780 TCGGAGCATA TTGAATCTGT GGAAGTTACA AGCAAGTTAA TGTCTAGTTA TTTTACTTCC 840 GACACATACG CCAATGAGCA TTCAGCATGT GCTGCTAGGT TGGCAGCTGG GTTATGTGCC 900 GATCTAGCAT CGGCAGTTGT TTCTGGGCGT GCCAAAAATG GATTTGCTTT GGTTAGACCT 960 CCTGGTCATC ATGCCGGTGT AAAAGATGTG ATGGGGTTTT GCCTTCACAA TAATGCCGCA 1020 GTGGCAGCAT TGGCAGCTCA GGCTGCAGGG GCTAGGAAGG TGCTAATTTT AGATTGGGAT 1080 GTTCATCACG GAAATGGCAC ACAGGAAATA TTTGAGCAAA ACAAATCAGT CTTGTATATA 1140 TCATTGCATA GACATGAGGA TGGAACATTT TATCCCGGTA CTGGAGGTGC TCATGAGGTT 1200 GGTTATATGG GTGCAGAAGG TTACTGTGTG AATATTCCAT GGAGTCGAGG TGGTGTTGGT 1260 GATAATGATT ACATTTTTGC ATTTCAGAAT GTTGTACTTC CTATAGCTTC TGAATTCGCT 1320 CCAGATTTTA CCATAATATC AGCAGGATTT GATGCTGCTA GAGGTGATCC CCTTGGAGGT 1380 TGTGATATTA CTCCCTCTGG CTATGCACAG ATGACGCACA TGTTGAATGC CCTTTCTGGT 1440 GGAAAAATGC TTGTTATTCT TGAGGGGGGC TATAATCTTC GTTCCATATC ATCTTCTGCA 1500 ACTTCAGTAA TCAAGGTATT ACTGGGTGAG AGTCCTGTAT GTGAACTGGA AAATAGTTTC 1560 CCTACCAAAT CTGGCCTCCA AACTGTTTTC GAAGTCCTCG ACATTCAAAA TAATTTTTGG 1620 CCTTCCTTGA AACCTATCTT TAAAAATGTG ATGTCACTTT GGGAAATGCA ATGTCTTGGG 1680 AAAAAAGGCA AACAGACAAA AAAGAGACGC CGAATTTTGG CACCAATGTG GTGGAGGTGG 1740 AGTCGCAGAA GTTTCTTATT CCATATGCTG AACGGCCATC GTCGTGTAAA ATCAAAATGA 1800
1801Nucleotide Fasta Sequence
>KEH32089|Class-I|Medicago truncatula ATGAAAGCTACTATTAATCAAGCTGATGAACTCGATGCTGCTGAGGCTATGCCACCGCCTAATTCCAAAAGGGTCAGGGTCAAAAAAGAACTAACTTTTCAAGATATGTATCAAAACCAAGACTTGTTTGATCAGGATGATGATGAGGACGATGATTGGGACCCTTCTCAGAAGCAAGCTGATGATGGAGTTGCTCAGACTGCTGTTTCCGATTCCATCCATGAAGTTTCAGAAGCCAATCCACAGCCTAATGCTAAAAGGGTTAAGGTGCAAAAGGAACTAACTTTTCAGGACCTGTATCAAAGCCAAGAGTTGTTTGACGAGGATGATGAGGAGGACGATGATTGGGACCCAACTCAGTTGCAGAAGTGTCTCGAAGTCATCAAGTGGTTCTGTAAAAATTGTACTATGGATAACCTAAACAATGATGTCTGTTGTCAAATATGTGGGGAGCATAAAGATTCTAAAATCCTGAGCCGTGGGCATTTTGCATCTCGCTTTGCACAAGATGAAGATCCAAATGAGATCCAGCCAAGTATAAAAAGACTGAAAGATGTTGACTCACTGGAATCTGCAGCAAACAGTTCTACGGCAATTGGCTTTGATGAAAGAATGTTGTTACATGCAGAAGTTGAAATGAAATCACGTCCACACCCCGAAAGGCCAGATCGACTTCGAGCAATTGCTGCTAGTCTTGCCAGAGCTGGTATATTTCCAGGAAGATGCCATTCAATTCCTGCTAGAGAAATCACTCAAGAAGAACTGATGATGGTTCATTCTTCGGAGCATATTGAATCTGTGGAAGTTACAAGCAAGTTAATGTCTAGTTATTTTACTTCCGACACATACGCCAATGAGCATTCAGCATGTGCTGCTAGGTTGGCAGCTGGGTTATGTGCCGATCTAGCATCGGCAGTTGTTTCTGGGCGTGCCAAAAATGGATTTGCTTTGGTTAGACCTCCTGGTCATCATGCCGGTGTAAAAGATGTGATGGGGTTTTGCCTTCACAATAATGCCGCAGTGGCAGCATTGGCAGCTCAGGCTGCAGGGGCTAGGAAGGTGCTAATTTTAGATTGGGATGTTCATCACGGAAATGGCACACAGGAAATATTTGAGCAAAACAAATCAGTCTTGTATATATCATTGCATAGACATGAGGATGGAACATTTTATCCCGGTACTGGAGGTGCTCATGAGGTTGGTTATATGGGTGCAGAAGGTTACTGTGTGAATATTCCATGGAGTCGAGGTGGTGTTGGTGATAATGATTACATTTTTGCATTTCAGAATGTTGTACTTCCTATAGCTTCTGAATTCGCTCCAGATTTTACCATAATATCAGCAGGATTTGATGCTGCTAGAGGTGATCCCCTTGGAGGTTGTGATATTACTCCCTCTGGCTATGCACAGATGACGCACATGTTGAATGCCCTTTCTGGTGGAAAAATGCTTGTTATTCTTGAGGGGGGCTATAATCTTCGTTCCATATCATCTTCTGCAACTTCAGTAATCAAGGTATTACTGGGTGAGAGTCCTGTATGTGAACTGGAAAATAGTTTCCCTACCAAATCTGGCCTCCAAACTGTTTTCGAAGTCCTCGACATTCAAAATAATTTTTGGCCTTCCTTGAAACCTATCTTTAAAAATGTGATGTCACTTTGGGAAATGCAATGTCTTGGGAAAAAAGGCAAACAGACAAAAAAGAGACGCCGAATTTTGGCACCAATGTGGTGGAGGTGGAGTCGCAGAAGTTTCTTATTCCATATGCTGAACGGCCATCGTCGTGTAAAATCAAAATGA
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |