WERAM Information

Tag Content
WERAM ID WERAM-Pot-0130
Ensembl Protein ID POPTR_0012s05730.1
Gene Name POPTR_0012s05730g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0012s05730 POPTR_0012s05730.1 POPTR_0012s05730.1
POPTR_0012s05730 POPTR_0012s05730.2 POPTR_0012s05730.2
POPTR_0012s05730 POPTR_0012s05730.3 POPTR_0012s05730.3
POPTR_0012s05730 POPTR_0012s05730.4 POPTR_0012s05730.4
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 7.60e-113 378.1 184 496
HDAC Class-I 8.60e-33 115.4 310 489
Organism Populus trichocarpa
Domain Profile
  HDAC Class-II
         class-2.txt   2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeaglle.kleelkarkatkeelqlvHseehvelletaeklekeelesltvdsds 91 
                         +++ +de+ml h+ ++ +++ hpE+++R++ai  +l++agl + ++  ++ar+ t+eelq+vHs eh++ +e +++  ++        + +
  POPTR_0012s05730.1 184 TAIGFDERMLLHSEVQMKSHPHPERSDRLRAIAASLATAGLFPgRCYPISAREITREELQMVHSLEHIQDVELTSHIFSSYF------TPD 268
                         5789************************************99879***************************9954444433......458 PP
         class-2.txt  92 iylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkilivDwDvHhGnGtqeif 182
                         +y++++s+ aarla+G + +l++++++g++kngfa+vRPPGHHa  ++amGFCl+nn+avaa  +q   + kk+livDwDvHhGnGtqeif
  POPTR_0012s05730.1 269 TYANEHSACAARLAAGLCADLASTIFSGRVKNGFAMVRPPGHHAGVREAMGFCLHNNAAVAALAAQAAGA-KKVLIVDWDVHHGNGTQEIF 358
                         9************************************************************988777665.******************** PP
         class-2.txt 183 ykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgg 273
                          ++++vly+SlHR++ g+f+p  g+g+++evg++ +eg  vN++w+ g++gd++y++af+++vlpia+eF+Pd+ ++saGfDaa+gdplg 
  POPTR_0012s05730.1 359 DQNKSVLYISLHRHEGGKFYP--GTGSANEVGRNGAEGSCVNIPWSRGGVGDNDYIFAFQNLVLPIATEFAPDFTIISAGFDAARGDPLGC 447
                         *********************..******************************************************************** PP
         class-2.txt 274 lsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322
                         ++vt+++y+++t +l +l+gg+++++lEGGynl++i++++++v+k+Llg
  POPTR_0012s05730.1 448 CDVTPAGYSRMTDMLYTLTGGKLLVILEGGYNLRSISSSATSVIKVLLG 496
                         ***********************************************96 PP
  HDAC Class-I
         class-1.txt 132 hhakkseasGfcyvnDivlailellk.khkrvlyididlhhGDgveeafyttdrvmtvsfhkyge.effPgtGdlsdvgaekgkyyavnvP 220
                         hha  +ea Gfc  n+  +a l  +    k+vl +d d+hhG+g +e f + + v+ +s+h+++  +f+PgtG+ ++vg +     +vn+P
  POPTR_0012s05730.1 310 HHAGVREAMGFCLHNNAAVAALAAQAaGAKKVLIVDWDVHHGNGTQEIFDQNKSVLYISLHRHEGgKFYPGTGSANEVGRNGAEGSCVNIP 400
                         ****************99999988775899********************************97527************************ PP
         class-1.txt 221 l.kdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksf.nlpllvlGGGGYtlrnvaRcwty 307
                           + g+ D+ y   f++++ ++   f P+  ++  G D+  gD+lg+ +++  g++++ +++ +    +llv+  GGY+lr ++   t 
  POPTR_0012s05730.1 401 WsRGGVGDNDYIFAFQNLVLPIATEFAPDFTIISAGFDAARGDPLGCCDVTPAGYSRMTDMLYTLtGGKLLVILEGGYNLRSISSSATS 489
                         83568*********************************************************9997789************99976665 PP
Protein Sequence
(Fasta)		MGSETIKTGR LANGEAQKSV HKERRGLSSN GMNGKHENLG SNRAGTSSSG EDYDLMMNTG 60
DVDGNLDGDV EPVFRKARQG DLTFQDIHDN RDFFDEDDED DSDWEPVQKH VELIKWFCVN 120
CTMVNLGDGV ICDLCGEHKD SGILRLGCFA SPSSQDAGCS EVESEMKGKN KEMHSQLSAS 180
NSLTAIGFDE RMLLHSEVQM KSHPHPERSD RLRAIAASLA TAGLFPGRCY PISAREITRE 240
ELQMVHSLEH IQDVELTSHI FSSYFTPDTY ANEHSACAAR LAAGLCADLA STIFSGRVKN 300
GFAMVRPPGH HAGVREAMGF CLHNNAAVAA LAAQAAGAKK VLIVDWDVHH GNGTQEIFDQ 360
NKSVLYISLH RHEGGKFYPG TGSANEVGRN GAEGSCVNIP WSRGGVGDND YIFAFQNLVL 420
PIATEFAPDF TIISAGFDAA RGDPLGCCDV TPAGYSRMTD MLYTLTGGKL LVILEGGYNL 480
RSISSSATSV IKVLLGEGPG SELGNIAPSR AGLQTVLEVM KIQMNFWPSL GSSYAKLQSQ 540
WGAYCNTRKQ IKKRQRTEPP IWWKWGRKRL LYHILVRRLH VKSRGKPSLH SS 592
Nucleotide Sequence
(Fasta)		TTCCCAAAGC AAAAACAACA GCACTAGTAA GAAAATATTT ATTCGAATCT TGGAGGCAAT 60
ATGGGTTCTG AAACAATTAA AACAGGTCGT TTAGCAAATG GGGAGGCTCA GAAGAGTGTT 120
CACAAAGAAA GGCGTGGTCT TTCCAGTAAT GGTATGAATG GCAAACATGA AAACTTGGGT 180
TCTAATCGAG CTGGAACTAG TTCAAGTGGT GAAGATTATG ATTTAATGAT GAATACGGGA 240
GATGTAGATG GCAACTTAGA CGGTGACGTA GAACCTGTTT TTAGAAAGGC TAGACAGGGA 300
GACTTGACAT TTCAGGACAT TCATGACAAC AGAGATTTCT TTGATGAAGA CGATGAAGAC 360
GACAGTGACT GGGAGCCTGT GCAAAAGCAT GTAGAGCTTA TAAAGTGGTT TTGCGTCAAC 420
TGCACTATGG TTAATCTTGG CGATGGTGTC ATCTGTGATT TATGTGGTGA ACATAAAGAT 480
TCTGGTATTT TGAGGCTGGG GTGCTTTGCA TCTCCTTCAT CACAAGACGC AGGTTGCAGT 540
GAGGTTGAGT CAGAAATGAA AGGAAAAAAC AAAGAGATGC ACTCACAACT TTCAGCCTCC 600
AACAGTTTGA CAGCAATTGG TTTTGATGAG AGGATGTTGC TACACTCAGA GGTCCAAATG 660
AAGTCACATC CCCACCCAGA ACGATCTGAT CGCCTTCGAG CTATTGCTGC TAGCCTTGCT 720
ACTGCTGGGT TATTTCCTGG AAGATGCTAC CCAATTTCTG CAAGAGAGAT TACCCGAGAA 780
GAACTTCAAA TGGTGCATTC GTTGGAACAC ATTCAAGATG TAGAACTCAC AAGCCATATT 840
TTCTCCAGTT ATTTCACTCC TGACACGTAT GCTAATGAGC ATTCAGCATG TGCTGCTAGG 900
CTTGCGGCAG GATTGTGTGC TGATCTTGCT TCAACAATTT TCTCAGGACG GGTGAAAAAT 960
GGTTTTGCTA TGGTTCGGCC TCCTGGCCAT CATGCTGGTG TAAGAGAGGC AATGGGATTC 1020
TGTCTTCATA ATAATGCTGC AGTTGCTGCG TTAGCTGCTC AGGCTGCTGG TGCCAAGAAG 1080
GTGCTTATAG TTGATTGGGA TGTCCATCAT GGAAATGGCA CACAAGAAAT TTTTGATCAG 1140
AACAAATCGG TTTTATACAT ATCTTTGCAT AGACATGAGG GGGGAAAGTT CTATCCTGGC 1200
ACTGGCTCTG CTAATGAGGT TGGTAGAAAT GGTGCAGAAG GATCCTGTGT AAATATTCCC 1260
TGGAGTCGTG GTGGAGTTGG TGATAATGAT TATATTTTTG CTTTTCAAAA CCTTGTGCTA 1320
CCTATAGCCA CTGAGTTTGC TCCAGATTTC ACCATCATAT CAGCTGGATT TGATGCTGCA 1380
AGGGGGGATC CTCTAGGATG CTGTGATGTA ACTCCTGCTG GCTATTCACG AATGACAGAT 1440
ATGTTGTATA CTCTTACTGG TGGAAAGTTG CTTGTTATTC TAGAGGGCGG ATACAATCTA 1500
CGCTCAATAT CATCTTCTGC CACCTCAGTG ATCAAGGTAT TGCTGGGTGA AGGTCCTGGA 1560
TCTGAATTGG GAAACATTGC ACCTTCCAGA GCTGGTCTTC AAACTGTTCT GGAAGTCATG 1620
AAGATTCAAA TGAACTTCTG GCCATCTCTT GGATCTAGCT ATGCAAAATT GCAATCCCAA 1680
TGGGGAGCAT ACTGCAATAC AAGAAAACAA ATAAAAAAGC GGCAGAGGAC TGAACCACCC 1740
ATATGGTGGA AATGGGGAAG AAAGAGGCTG TTGTATCATA TCCTTGTTAG GCGTCTTCAT 1800
GTAAAATCGA GGGGGAAACC TTCTCTTCAT TCATCGTAGT GGTAGTCTGA AATTTTGTAT 1860
ATCAGTAACT TCTAGTTCTG TATGACTGCT ACACCTTAGT GGTAGTATTT GTGCATGCTG 1920
CGTTGCTCTA AAGCCTCTGA AAAGTGAGTT TCGTTTCCGC CCCTTCTGGC CCCCTTCTGT 1980
TTTTTAAACA AATTGCTGTC CCTTCATTTG TTTCTCTTTT TGTTGATAAA TGATCAAAAT 2040
GTGCTGAAGC CCCCAGTTTT TATCTGAAGC TCTTTAAAAA AAAAAAAAAT TTGGGTC 2098
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Thc-0030 EOY20940 Theobroma cacao 70 0.0 763
WERAM-Viv-0105 VIT_17s0000g04120.t01 Vitis vinifera 67 0.0 721
WERAM-Prp-0050 EMJ11455 Prunus persica 68 0.0 712
WERAM-Sot-0015 PGSC0003DMT400014582 Solanum tuberosum 63 0.0 685
WERAM-Sol-0057 Solyc03g119730.2.1 Solanum lycopersicum 63 0.0 673
WERAM-Met-0113 KEH32089 Medicago truncatula 70 0.0 657
WERAM-Art-0072 AT3G18520.1 Arabidopsis thaliana 68 0.0 640
WERAM-Arl-0060 fgenesh2_kg.3__ 2057__ AT3G18520.1 Arabidopsis lyrata 69 0.0 640
WERAM-Glm-0224 GLYMA17G13000.1 Glycine max 71 0.0 639
WERAM-Bro-0099 Bo5g118460.1 Brassica oleracea 68 1e-179 627
WERAM-Brr-0115 Bra022329.1-P Brassica rapa 68 1e-178 624
WERAM-Mua-0121 GSMUA_Achr8P20260_001 Musa acuminata 66 6e-172 601
WERAM-Amt-0097 ERN15947 Amborella trichopoda 66 5e-171 598
WERAM-Org-0071 ORGLA07G0034700.1 Oryza glaberrima 62 4e-151 532
WERAM-Orb-0071 OBART07G04070.1 Oryza barthii 62 9e-151 531
WERAM-Orbr-0079 OB07G13070.1 Oryza brachyantha 63 9e-150 527
WERAM-Orp-0068 OPUNC07G03920.1 Oryza punctata 63 5e-149 525
WERAM-Orni-0070 ONIVA07G02650.1 Oryza nivara 63 7e-149 525
WERAM-Zem-0064 GRMZM2G107309_P01 Zea mays 63 8e-149 524
WERAM-Tra-0242 Traes_5DS_18DC37E47.1 Triticum aestivum 63 1e-148 524
WERAM-Orl-0056 KN539089.1_FGP007 Oryza longistaminata 62 2e-147 520
WERAM-Orr-0073 ORUFI07G03770.1 Oryza rufipogon 62 3e-147 519
WERAM-Ors-0064 OS07T0164100-01 Oryza sativa 62 8e-147 518
WERAM-Ori-0081 BGIOSGA024767-PA Oryza indica 62 8e-147 518
WERAM-Orgl-0069 OGLUM07G03480.1 Oryza glumaepatula 62 3e-146 516
WERAM-Sob-0016 Sb02g003690.1 Sorghum bicolor 61 7e-146 514
WERAM-Lep-0070 LPERR07G03600.1 Leersia perrieri 61 2e-145 513
WERAM-Sei-0111 Si029194m Setaria italica 62 2e-145 513
WERAM-Sem-0039 EFJ31239 Selaginella moellendorffii 60 1e-143 507
WERAM-Tru-0033 TRIUR3_17245-P1 Triticum urartu 58 3e-139 492
WERAM-Hov-0036 MLOC_37038.1 Hordeum vulgare 69 6e-139 491
WERAM-Aet-0038 EMT15178 Aegilops tauschii 58 1e-136 484
WERAM-Php-0023 PP1S145_70V6.1 Physcomitrella patens 53 2e-122 436
WERAM-Brd-0030 BRADI1G56740.2 Brachypodium distachyon 63 1e-89 328
WERAM-Orm-0067 OMERI07G02600.4 Oryza meridionalis 58 7e-80 295
WERAM-Kop-0012 CAY68916 Komagataella pastoris 43 7e-76 282
WERAM-Caa-0034 KGT64501 Candida albicans 43 5e-73 273
WERAM-Coi-0028 EAS30926 Coccidioides immitis 43 6e-73 272
WERAM-Pug-0031 EFP89333 Puccinia graminis 45 1e-72 271
WERAM-Tum-0026 CAZ84932 Tuber melanosporum 44 2e-72 271
WERAM-Orn-0011 ENSONIP00000001061.1 Oreochromis niloticus 42 2e-72 271
WERAM-Mel-0037 EGG03660 Melampsora laricipopulina 40 2e-72 270
WERAM-Asn-0017 CADANIAP00004063 Aspergillus nidulans 41 3e-72 270
WERAM-Pof-0022 ENSPFOP00000001799.2 Poecilia formosa 44 5e-72 269
WERAM-Crn-0010 AAW42071 Cryptococcus neoformans 47 9e-72 268
WERAM-Xim-0160 ENSXMAP00000013063.1 Xiphophorus maculatus 45 1e-71 268
WERAM-Dar-0023 ENSDARP00000124246.1 Danio rerio 44 1e-71 268
WERAM-Asm-0181 ENSAMXP00000017644.1 Astyanax mexicanus 44 1e-71 268
WERAM-Ast-0014 CADATEAP00005667 Aspergillus terreus 41 2e-71 267
WERAM-Tar-0042 ENSTRUP00000010127.1 Takifugu rubripes 44 2e-71 267
WERAM-Ran-0209 ENSRNOP00000009295.5 Rattus norvegicus 41 1e-70 265
WERAM-Ten-0019 ENSTNIP00000004593.1 Tetraodon nigroviridis 45 4e-70 263
WERAM-Mum-0115 ENSMUSP00000033501.8 Mus musculus 42 4e-70 263
WERAM-Asc-0002 CADACLAP00000048 Aspergillus clavatus 43 7e-70 262
WERAM-Usm-0012 UM02102P0 Ustilago maydis 44 8e-70 262
WERAM-Mod-0081 ENSMODP00000012731.2 Monodelphis domestica 43 8e-70 262
WERAM-Xet-0155 ENSXETP00000050501.3 Xenopus tropicalis 43 1e-69 261
WERAM-Scp-0036 SPBC800.03.1:pep Schizosaccharomyces pombe 43 2e-69 261
WERAM-Pytr-0015 EDU46537 Pyrenophora triticirepentis 40 2e-69 261
WERAM-Yal-0023 CAG79971 Yarrowia lipolytica 41 2e-69 260
WERAM-Miv-0034 MVLG_04888T0 Microbotryum violaceum 42 3e-69 260
WERAM-Scj-0031 EEB08679 Schizosaccharomyces japonicus 43 4e-69 260
WERAM-Zyt-0016 Mycgr3P37223 Zymoseptoria tritici 39 4e-69 259
WERAM-Orc-0102 ENSOCUP00000008741.3 Oryctolagus cuniculus 43 4e-69 259
WERAM-Lem-0023 CBX90551 Leptosphaeria maculans 42 5e-69 259
WERAM-Ict-0125 ENSSTOP00000012693.2 Ictidomys tridecemlineatus 41 8e-69 258
WERAM-Pyt-0023 EFQ89752 Pyrenophora teres 42 8e-69 258
WERAM-Cag-0018 CAG60803 Candida glabrata 41 1e-68 258
WERAM-Lac-0055 ENSLACP00000007918.1 Latimeria chalumnae 41 2e-68 257
WERAM-Ocp-0057 ENSOPRP00000005096.1 Ochotona princeps 42 5e-68 256
WERAM-Mae-0111 ENSMEUP00000010640.1 Macropus eugenii 43 1e-67 255
WERAM-Put-0014 PTTG_07163P0 Puccinia triticina 43 1e-67 255
WERAM-Fec-0031 ENSFCAP00000002366.3 Felis catus 42 2e-67 254
WERAM-Aim-0139 ENSAMEP00000013236.1 Ailuropoda melanoleuca 43 2e-67 254
WERAM-Myl-0104 ENSMLUP00000008295.2 Myotis lucifugus 41 3e-67 253
WERAM-Sac-0037 YNL021W Saccharomyces cerevisiae 41 5e-67 253
WERAM-Spr-0021 CBQ72644 Sporisorium reilianum 44 7e-67 252
WERAM-Asg-0010 AAS51704 Ashbya gossypii 42 2e-66 250
WERAM-Aso-0015 CADAORAP00001816 Aspergillus oryzae 39 3e-66 250
WERAM-Mup-0158 ENSMPUP00000013557.1 Mustela putorius furo 43 6e-66 249
WERAM-Kll-0020 CAG99415 Kluyveromyces lactis 40 1e-65 248
WERAM-Mao-0002 MGG_01076T0 Magnaporthe oryzae 41 1e-65 248
WERAM-Gag-0014 GGTG_04308T0 Gaeumannomyces graminis 40 2e-65 247
WERAM-Ved-0005 EGY17208 Verticillium dahliae 38 2e-65 247
WERAM-Pem-0058 ENSPMAP00000006830.1 Petromyzon marinus 42 3e-65 246
WERAM-Eqc-0001 ENSECAP00000001121.1 Equus caballus 41 8e-65 245
WERAM-Trv-0041 EHK18675 Trichoderma virens 40 9e-65 245
WERAM-Caf-0161 ENSCAFP00000022990.3 Canis familiaris 42 1e-64 245
WERAM-Ova-0124 ENSOARP00000012678.1 Ovis aries 42 1e-64 245
WERAM-Otg-0144 ENSOGAP00000012420.2 Otolemur garnettii 39 1e-64 244
WERAM-Sah-0012 ENSSHAP00000001165.1 Sarcophilus harrisii 43 2e-64 244
WERAM-Anc-0082 ENSACAP00000007918.3 Anolis carolinensis 41 3e-64 243
WERAM-Chs-0158 ENSCSAP00000009365.1 Chlorocebus sabaeus 42 3e-64 243
WERAM-Mam-0153 ENSMMUP00000021637.2 Macaca mulatta 42 4e-64 243
WERAM-Paa-0049 ENSPANP00000006915.1 Papio anubis 42 4e-64 243
WERAM-Cap-0109 ENSCPOP00000008049.2 Cavia porcellus 42 6e-64 242
WERAM-Cae-0008 C10E2.3a Caenorhabditis elegans 37 7e-64 242
WERAM-Gog-0047 ENSGGOP00000004443.2 Gorilla gorilla 42 8e-64 242
WERAM-Hos-0047 ENSP00000365804.2 Homo sapiens 42 9e-64 242
WERAM-Sus-0177 ENSSSCP00000022636.1 Sus scrofa 41 9e-64 242
WERAM-Caj-0022 ENSCJAP00000004409.2 Callithrix jacchus 42 1e-63 241
WERAM-Fuo-0035 FOXG_13914P0 Fusarium oxysporum 38 2e-63 241
WERAM-Trr-0039 EGR46026 Trichoderma reesei 40 2e-63 240
WERAM-Lab-0047 EDQ99497 Laccaria bicolor 40 4e-63 240
WERAM-Chg-0033 EAQ86725 Chaetomium globosum 39 9e-63 238
WERAM-Dan-0022 ENSDNOP00000002136.3 Dasypus novemcinctus 42 1e-62 238
WERAM-Bot-0122 ENSBTAP00000017618.5 Bos taurus 41 1e-62 238
WERAM-Nec-0012 EFNCRP00000001681 Neurospora crassa 40 4e-62 236
WERAM-Drm-0028 FBpp0290988 Drosophila melanogaster 41 8e-62 235
WERAM-Orla-0013 ENSORLP00000001341.1 Oryzias latipes 40 1e-61 235
WERAM-Dio-0075 ENSDORP00000007462.1 Dipodomys ordii 41 2e-61 234
WERAM-Nol-0078 ENSNLEP00000009627.2 Nomascus leucogenys 39 4e-61 233
WERAM-Map-0033 MAPG_10880T0 Magnaporthe poae 39 4e-61 233
WERAM-Asfu-0010 CADAFUAP00002902 Aspergillus fumigatus 38 6e-61 233
WERAM-Prc-0036 ENSPCAP00000003334.1 Procavia capensis 41 8e-61 232
WERAM-Loa-0047 ENSLAFP00000003196.3 Loxodonta africana 40 9e-61 232
WERAM-Osl-0043 ABO96923 Ostreococcus lucimarinus 39 9e-61 232
WERAM-Phn-0010 SNOT_01279 Phaeosphaeria nodorum 50 1e-60 231
WERAM-Poa-0196 ENSPPYP00000022747.2 Pongo abelii 40 2e-60 231
WERAM-Pat-0158 ENSPTRP00000032389.5 Pan troglodytes 40 3e-60 230
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 39 1e-59 228
WERAM-Meg-0108 ENSMGAP00000010913.2 Meleagris gallopavo 37 2e-59 228
WERAM-Gaga-0067 ENSGALP00000010190.4 Gallus gallus 37 2e-59 227
WERAM-Ptv-0077 ENSPVAP00000007213.1 Pteropus vampyrus 40 2e-59 227
WERAM-Fia-0117 ENSFALP00000010126.1 Ficedula albicollis 38 5e-59 226
WERAM-Gaa-0053 ENSGACP00000006953.1 Gasterosteus aculeatus 39 5e-59 226
WERAM-Tag-0054 ENSTGUP00000003859.1 Taeniopygia guttata 40 7e-59 226
WERAM-Tut-0056 ENSTTRP00000004443.1 Tursiops truncatus 41 1e-58 225
WERAM-Pes-0105 ENSPSIP00000013270.1 Pelodiscus sinensis 38 1e-58 225
WERAM-Leo-0130 ENSLOCP00000016135.1 Lepisosteus oculatus 39 1e-58 225
WERAM-Anp-0022 ENSAPLP00000003127.1 Anas platyrhynchos 39 4e-58 223
Created Date 25-Jun-2016