Tag |
Content |
WERAM ID |
WERAM-Orni-0070 |
Ensembl Protein ID |
ONIVA07G02650.1 |
Gene Name |
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Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
7.30e-114 |
381.5 |
259 |
571 |
HDAC |
Class-I |
5.60e-38 |
132.5 |
279 |
564 |
|
Organism |
Oryza nivara |
Domain Profile |
HDAC Class-II
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeaglle.kleelkarkatkeelqlvHseehvelletaeklekeelesltvdsdsiyl 94 +++ +de+ml h+ +e + + hpE+p+R++ai +l++ag+ + k++ + r+ tkeel+ vH+++h++ +e+++++ + + ++y+ ONIVA07G02650.1 259 TAVGFDERMLLHSEIEIKPNPHPERPDRLRAIAASLAAAGIFPsKCVMVPPREITKEELLRVHTSDHIDSVEQTKNMLYSYFT------SDTYA 346 6799***********************************999758*****************************665555444......478** PP class-2.txt 95 esksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkilivDwDvHhGnGtqeifykdpkv 188 + +s+ aa+la+G + +l++ +++g+++ngfa+vRPPGHHa ++amGFCl+nn+avaa +q+ +kk+livDwDvHhGnGtqeif d++v ONIVA07G02650.1 347 NGHSACAAKLAAGICADLANLIVSGRVRNGFAMVRPPGHHAGVKQAMGFCLHNNAAVAALAAQRAG-AKKVLIVDWDVHHGNGTQEIFDGDNSV 439 **********************************************************98777665.5************************** PP class-2.txt 189 lylSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgglsvtakcya 282 ly+SlHR+++gsf+p g+ga++evg +g+gf+vN++w+ g++gd++y++af++vvlpia eF+Pd+ ++saGfDaa+gdplg ++vt+++y+ ONIVA07G02650.1 440 LYISLHRHEDGSFYP--GTGAANEVGVMDGQGFSVNIPWSRGGVGDNDYIFAFKHVVLPIAAEFAPDITIISAGFDAARGDPLGCCDVTPAGYS 531 ***************..***************************************************************************** PP class-2.txt 283 tltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322 +++ +l+ ++g+++++lEGGynl++i++++++vvk+Llg ONIVA07G02650.1 532 RMVSMLTACSQGKLLVILEGGYNLRSISSSATEVVKVLLG 571 **************************************96 PP
HDAC Class-I
class-1.txt 19 khpmkpkrlslth.eLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycqlitGasle 111 hp +p rl+ + +L+ + k +v p++ ++eell++h+ ++i+ +++ ++ + ++ + ++ g+ + + +G + ONIVA07G02650.1 279 PHPERPDRLRAIAaSLAAAGIFPSKCVMVPPREITKEELLRVHTSDHIDSVEQTKNMLYSYFT--SDTYANGHSACAAKLA-------AGICAD 363 58899999986651666666677888899999999999*****99999998887776666666..5567777766555444.......444444 PP class-1.txt 112 aakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellk.khkrvlyididlhhGDgveeafyttdrvmtvsfhkygee.ffPgt 201 a+ + +++ a+ G hha ++a Gfc n+ +a l ++ k+vl +d d+hhG+g +e f + v+ +s+h+++++ f+Pgt ONIVA07G02650.1 364 LANLIVSGRVRngFAMVRPPG-HHAGVKQAMGFCLHNNAAVAALAAQRaGAKKVLIVDWDVHHGNGTQEIFDGDNSVLYISLHRHEDGsFYPGT 456 444444443330044444444.999999**********99999999886799*********************************985499*** PP class-1.txt 202 GdlsdvgaekgkyyavnvPl.kdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksf.nlpllvlGG 293 G ++vg+ +g+ ++vn+P + g+ D+ y fk+v+ ++ f P++ ++ G D+ gD+lg+ +++ g++++v+++ + +llv+ ONIVA07G02650.1 457 GAANEVGVMDGQGFSVNIPWsRGGVGDNDYIFAFKHVVLPIAAEFAPDITIISAGFDAARGDPLGCCDVTPAGYSRMVSMLTACsQGKLLVILE 550 *******************83568*********************************************************9987889****** PP class-1.txt 294 GGYtlrnvaRcwty 307 GGY+lr ++ t ONIVA07G02650.1 551 GGYNLRSISSSATE 564 ******99976665 PP
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Protein Sequence (Fasta) | MEGASRDGPT RAEHEAHEPL FTVIPWPRRA PPKIQSREAS AAAAGIALQI VLHALMASDM 60 RSLNSQKGQS CGVSDQACHS KSKSGNDGKP SHAKANGVSS LSGSHNDEKI LKENSGACNL 120 NSDHANPLSV DGTKVSTARS ELIDSSGHDG CLHVKNESCM ACDDLLQESD KEQPGGTLED 180 LFSFNDEEDD DSDWEPSARL ALSRWFCLNC TVPNMEGFTH CQNCDELKGS VVVGYDAFKA 240 HLAQAALLSA DAVLPSVSTA VGFDERMLLH SEIEIKPNPH PERPDRLRAI AASLAAAGIF 300 PSKCVMVPPR EITKEELLRV HTSDHIDSVE QTKNMLYSYF TSDTYANGHS ACAAKLAAGI 360 CADLANLIVS GRVRNGFAMV RPPGHHAGVK QAMGFCLHNN AAVAALAAQR AGAKKVLIVD 420 WDVHHGNGTQ EIFDGDNSVL YISLHRHEDG SFYPGTGAAN EVGVMDGQGF SVNIPWSRGG 480 VGDNDYIFAF KHVVLPIAAE FAPDITIISA GFDAARGDPL GCCDVTPAGY SRMVSMLTAC 540 SQGKLLVILE GGYNLRSISS SATEVVKVLL GDSPVYDIDA TEPSEEGIQT VLQVLSIQQQ 600 FWPVLVPSFA SVLALQRSVF SRYSTEVNKM KRKHAGGAGP FWWKWGSKRL LYEVLFEGRC 660 LRKTKDTGKE KLNDEAEP 678Protein Fasta Sequence
>ONIVA07G02650.1|Class-I|Oryza nivara MEGASRDGPTRAEHEAHEPLFTVIPWPRRAPPKIQSREASAAAAGIALQIVLHALMASDMRSLNSQKGQSCGVSDQACHSKSKSGNDGKPSHAKANGVSSLSGSHNDEKILKENSGACNLNSDHANPLSVDGTKVSTARSELIDSSGHDGCLHVKNESCMACDDLLQESDKEQPGGTLEDLFSFNDEEDDDSDWEPSARLALSRWFCLNCTVPNMEGFTHCQNCDELKGSVVVGYDAFKAHLAQAALLSADAVLPSVSTAVGFDERMLLHSEIEIKPNPHPERPDRLRAIAASLAAAGIFPSKCVMVPPREITKEELLRVHTSDHIDSVEQTKNMLYSYFTSDTYANGHSACAAKLAAGICADLANLIVSGRVRNGFAMVRPPGHHAGVKQAMGFCLHNNAAVAALAAQRAGAKKVLIVDWDVHHGNGTQEIFDGDNSVLYISLHRHEDGSFYPGTGAANEVGVMDGQGFSVNIPWSRGGVGDNDYIFAFKHVVLPIAAEFAPDITIISAGFDAARGDPLGCCDVTPAGYSRMVSMLTACSQGKLLVILEGGYNLRSISSSATEVVKVLLGDSPVYDIDATEPSEEGIQTVLQVLSIQQQFWPVLVPSFASVLALQRSVFSRYSTEVNKMKRKHAGGAGPFWWKWGSKRLLYEVLFEGRCLRKTKDTGKEKLNDEAEP
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Nucleotide Sequence (Fasta) | ATGGAGGGAG CAAGTAGAGA CGGACCCACT CGAGCCGAGC ACGAAGCGCA CGAGCCGCTC 60 TTCACAGTCA TCCCGTGGCC GCGCCGCGCC CCTCCAAAAA TCCAATCGCG AGAGGCGAGC 120 GCCGCCGCCG CCGGGATCGC CCTCCAGATT GTGTTGCATG CTCTGATGGC GTCTGATATG 180 AGGTCACTCA ACAGCCAAAA GGGACAGAGT TGTGGAGTTT CAGACCAAGC TTGCCACAGC 240 AAAAGCAAAA GCGGCAATGA TGGAAAACCA TCACATGCTA AAGCAAATGG AGTTTCCTCG 300 TTGAGCGGGA GTCATAATGA TGAGAAAATT TTGAAAGAGA ACTCTGGAGC ATGCAATTTA 360 AATTCCGACC ATGCCAATCC TTTATCAGTA GATGGGACCA AAGTTTCTAC AGCAAGGTCG 420 GAACTTATTG ACAGTTCAGG CCATGATGGT TGTCTGCATG TCAAGAATGA AAGCTGTATG 480 GCTTGTGATG ATCTGCTTCA AGAGTCTGAC AAAGAACAGC CTGGGGGTAC ACTGGAGGAT 540 CTATTTTCCT TTAATGATGA AGAGGATGAT GACAGTGACT GGGAACCCTC TGCTCGCCTT 600 GCTTTGAGCA GGTGGTTTTG CTTGAACTGT ACAGTGCCAA ACATGGAGGG GTTTACACAT 660 TGTCAGAATT GCGATGAGCT TAAGGGATCT GTGGTAGTTG GATATGATGC TTTCAAAGCT 720 CATCTTGCAC AGGCAGCTTT GTTATCTGCT GACGCAGTGC TGCCATCAGT ATCTACAGCT 780 GTCGGTTTTG ATGAAAGAAT GTTGCTCCAT AGTGAGATAG AGATTAAACC AAATCCACAT 840 CCAGAAAGGC CTGACCGCCT TCGTGCAATC GCTGCCAGTC TTGCTGCTGC AGGTATCTTC 900 CCTTCAAAAT GTGTCATGGT ACCTCCTCGA GAAATCACTA AGGAAGAACT CCTAAGGGTC 960 CATACTTCAG ATCACATTGA CAGTGTTGAG CAGACAAAGA ACATGCTTTA CAGTTACTTC 1020 ACTTCAGATA CCTATGCAAA TGGACACTCA GCATGTGCTG CCAAACTTGC AGCAGGGATA 1080 TGTGCTGATC TTGCTAACTT GATAGTATCT GGGCGTGTTC GCAATGGATT TGCAATGGTG 1140 AGACCTCCTG GCCATCATGC AGGGGTGAAA CAAGCCATGG GTTTTTGTCT TCACAATAAT 1200 GCAGCAGTGG CTGCATTAGC TGCACAAAGA GCTGGTGCCA AGAAAGTCTT AATAGTTGAC 1260 TGGGATGTCC ACCATGGCAA TGGAACACAG GAGATATTTG ATGGGGACAA TTCTGTCTTG 1320 TACATATCAT TACATCGGCA TGAGGATGGA AGCTTCTACC CTGGAACTGG GGCAGCAAAT 1380 GAGGTGGGAG TTATGGATGG CCAAGGATTC TCAGTCAATA TACCTTGGAG CCGTGGTGGT 1440 GTTGGAGACA ATGACTACAT ATTTGCTTTT AAGCATGTGG TGCTTCCGAT AGCTGCAGAA 1500 TTTGCTCCAG ACATCACCAT CATATCTGCA GGATTTGATG CAGCGAGGGG TGACCCTCTG 1560 GGTTGTTGTG ATGTCACACC TGCTGGATAT TCTAGGATGG TGTCCATGCT AACTGCTTGT 1620 TCACAGGGAA AATTGTTGGT TATACTTGAG GGAGGATACA ATCTTCGGTC TATATCCTCA 1680 TCAGCTACTG AAGTTGTTAA GGTCCTACTT GGGGATAGTC CTGTTTATGA TATAGATGCA 1740 ACTGAACCAT CAGAGGAGGG CATACAGACT GTCTTACAAG TCCTGAGTAT CCAGCAGCAA 1800 TTTTGGCCAG TTTTAGTTCC ATCCTTTGCA TCAGTTCTGG CACTGCAGCG GTCGGTTTTT 1860 TCCAGATATA GCACTGAAGT AAACAAGATG AAAAGGAAGC ATGCAGGAGG GGCAGGACCC 1920 TTCTGGTGGA AATGGGGGAG TAAAAGGCTA CTGTACGAAG TGCTATTTGA GGGCCGCTGT 1980 CTGAGGAAAA CCAAGGATAC AGGCAAAGAA AAATTGAATG ATGAAGCAGA GCCCTAAAT
2040 Nucleotide Fasta Sequence
>ONIVA07G02650.1|Class-I|Oryza nivara ATGGAGGGAGCAAGTAGAGACGGACCCACTCGAGCCGAGCACGAAGCGCACGAGCCGCTCTTCACAGTCATCCCGTGGCCGCGCCGCGCCCCTCCAAAAATCCAATCGCGAGAGGCGAGCGCCGCCGCCGCCGGGATCGCCCTCCAGATTGTGTTGCATGCTCTGATGGCGTCTGATATGAGGTCACTCAACAGCCAAAAGGGACAGAGTTGTGGAGTTTCAGACCAAGCTTGCCACAGCAAAAGCAAAAGCGGCAATGATGGAAAACCATCACATGCTAAAGCAAATGGAGTTTCCTCGTTGAGCGGGAGTCATAATGATGAGAAAATTTTGAAAGAGAACTCTGGAGCATGCAATTTAAATTCCGACCATGCCAATCCTTTATCAGTAGATGGGACCAAAGTTTCTACAGCAAGGTCGGAACTTATTGACAGTTCAGGCCATGATGGTTGTCTGCATGTCAAGAATGAAAGCTGTATGGCTTGTGATGATCTGCTTCAAGAGTCTGACAAAGAACAGCCTGGGGGTACACTGGAGGATCTATTTTCCTTTAATGATGAAGAGGATGATGACAGTGACTGGGAACCCTCTGCTCGCCTTGCTTTGAGCAGGTGGTTTTGCTTGAACTGTACAGTGCCAAACATGGAGGGGTTTACACATTGTCAGAATTGCGATGAGCTTAAGGGATCTGTGGTAGTTGGATATGATGCTTTCAAAGCTCATCTTGCACAGGCAGCTTTGTTATCTGCTGACGCAGTGCTGCCATCAGTATCTACAGCTGTCGGTTTTGATGAAAGAATGTTGCTCCATAGTGAGATAGAGATTAAACCAAATCCACATCCAGAAAGGCCTGACCGCCTTCGTGCAATCGCTGCCAGTCTTGCTGCTGCAGGTATCTTCCCTTCAAAATGTGTCATGGTACCTCCTCGAGAAATCACTAAGGAAGAACTCCTAAGGGTCCATACTTCAGATCACATTGACAGTGTTGAGCAGACAAAGAACATGCTTTACAGTTACTTCACTTCAGATACCTATGCAAATGGACACTCAGCATGTGCTGCCAAACTTGCAGCAGGGATATGTGCTGATCTTGCTAACTTGATAGTATCTGGGCGTGTTCGCAATGGATTTGCAATGGTGAGACCTCCTGGCCATCATGCAGGGGTGAAACAAGCCATGGGTTTTTGTCTTCACAATAATGCAGCAGTGGCTGCATTAGCTGCACAAAGAGCTGGTGCCAAGAAAGTCTTAATAGTTGACTGGGATGTCCACCATGGCAATGGAACACAGGAGATATTTGATGGGGACAATTCTGTCTTGTACATATCATTACATCGGCATGAGGATGGAAGCTTCTACCCTGGAACTGGGGCAGCAAATGAGGTGGGAGTTATGGATGGCCAAGGATTCTCAGTCAATATACCTTGGAGCCGTGGTGGTGTTGGAGACAATGACTACATATTTGCTTTTAAGCATGTGGTGCTTCCGATAGCTGCAGAATTTGCTCCAGACATCACCATCATATCTGCAGGATTTGATGCAGCGAGGGGTGACCCTCTGGGTTGTTGTGATGTCACACCTGCTGGATATTCTAGGATGGTGTCCATGCTAACTGCTTGTTCACAGGGAAAATTGTTGGTTATACTTGAGGGAGGATACAATCTTCGGTCTATATCCTCATCAGCTACTGAAGTTGTTAAGGTCCTACTTGGGGATAGTCCTGTTTATGATATAGATGCAACTGAACCATCAGAGGAGGGCATACAGACTGTCTTACAAGTCCTGAGTATCCAGCAGCAATTTTGGCCAGTTTTAGTTCCATCCTTTGCATCAGTTCTGGCACTGCAGCGGTCGGTTTTTTCCAGATATAGCACTGAAGTAAACAAGATGAAAAGGAAGCATGCAGGAGGGGCAGGACCCTTCTGGTGGAAATGGGGGAGTAAAAGGCTACTGTACGAAGTGCTATTTGAGGGCCGCTGTCTGAGGAAAACCAAGGATACAGGCAAAGAAAAATTGAATGATGAAGCAGAGCCCTAAAT
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Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |