Tag |
Content |
WERAM ID |
WERAM-Lep-0070 |
Ensembl Protein ID |
LPERR07G03600.1 |
Gene Name |
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Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
3.20e-109 |
366 |
636 |
958 |
HDAC |
Class-I |
4.10e-32 |
112.9 |
657 |
951 |
|
Organism |
Leersia perrieri |
Domain Profile |
HDAC Class-II
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeaglle.kleelkarkatkeelqlvHseehvelletaeklekeelesltvdsdsiyl 94 +++ +de+ml h+ +e + + hpE+p+R++ai +l++ag+ + k++ + r+ tkeel++vH+++h++ +e+++++ + + ++y+ LPERR07G03600.1 636 TAVGFDERMLLHREIEIKPNPHPERPDRLRAIAASLAAAGIFPsKCVMVPPREITKEELLSVHTSDHIDSVEQTKNMLYSYFT------SDTYA 723 6799***********************************999758*****************************665555444......478** PP class-2.txt 95 esksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkilivDw..........DvHhGnGt 178 + +s+ aa+la+G + +l++ +++g+++ngfa+vRPPGHHa ++amGFCl+nn+avaa +q+ +kk+livDw DvHhGnGt LPERR07G03600.1 724 NGHSACAAKLAAGICADLANLIVSGRVHNGFAMVRPPGHHAGVKQAMGFCLHNNAAVAALAAQRAG-AKKVLIVDWvmlvtslylnDVHHGNGT 816 **********************************************************98777665.5************************** PP class-2.txt 179 qeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplg 272 qeif d++vly+SlHR+++gsf+p g+ga++evg +g+gf+vN++w+ g++gd++y++af++vvlpia+eF+Pd+ ++saGfDaa+gdplg LPERR07G03600.1 817 QEIFDGDNSVLYISLHRHEDGSFYP--GTGAAHEVGVMDGQGFSVNIPWSSGGVGDNDYIFAFQQVVLPIATEFAPDITIISAGFDAARGDPLG 908 *************************..******************************************************************* PP class-2.txt 273 glsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322 ++vt+++y+++t +l++ ++g+++++lEGGynl++i++++++vvk+Llg LPERR07G03600.1 909 CCDVTPAGYSRMTSMLTSCSKGKLLVILEGGYNLRSISSSATEVVKVLLG 958 ************************************************96 PP
HDAC Class-I
class-1.txt 20 hpmkpkrlslth.eLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycqlitGaslea 112 hp +p rl+ + +L+ + k +v p++ ++eell++h+ ++i+ +++ ++ + ++ + ++ g+ + + c + LPERR07G03600.1 657 HPERPDRLRAIAaSLAAAGIFPSKCVMVPPREITKEELLSVHTSDHIDSVEQTKNMLYSYFT--SDTYANGHSACAAKLAAGIC-------ADL 741 88888888765415666666677888889999999999999999999988887766666665..55677676665544444444.......444 PP class-1.txt 113 akkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellk.khkrvlyidi..........dlhhGDgveeafyttdrvmtvsfhky 193 a+ + +++ + a+ G hha ++a Gfc n+ +a l ++ k+vl +d d+hhG+g +e f + v+ +s+h++ LPERR07G03600.1 742 ANLIVSGRVHngFAMVRPPG-HHAGVKQAMGFCLHNNAAVAALAAQRaGAKKVLIVDWvmlvtslylnDVHHGNGTQEIFDGDNSVLYISLHRH 834 44444443330044444444.999999**********999999998867999**999545556666779************************* PP class-1.txt 194 gee.ffPgtGdlsdvgaekgkyyavnvPlkd.gidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksf. 284 +++ f+PgtG ++vg+ +g+ ++vn+P + g+ D+ y f++v+ ++ f P++ ++ G D+ gD+lg+ +++ g++++ +++ s LPERR07G03600.1 835 EDGsFYPGTGAAHEVGVMDGQGFSVNIPWSSgGVGDNDYIFAFQQVVLPIATEFAPDITIISAGFDAARGDPLGCCDVTPAGYSRMTSMLTSCs 928 985499**********************97637***********************************************************97 PP class-1.txt 285 nlpllvlGGGGYtlrnvaRcwty 307 + +llv+ GGY+lr ++ t LPERR07G03600.1 929 KGKLLVILEGGYNLRSISSSATE 951 889************99976665 PP
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Protein Sequence (Fasta) | MNNLLSAGRD CFGVAGESEC DAVGREGIVQ VSLRRGGKTG ALGIIALDLL VFVSTQMDSF 60 ELPRGNSSRD GDIEMGMHQA DPSDNLKGFL KKVDAIEGLI AKLTNLLHKL QAANEESKAV 120 TKARDMKAIK QKMEKDIDEV GKIARMAKTK VDELEKDNLS NRQKPGCGKG SAVDRSREQT 180 TGAVKKKLKE RMDDFQVLRE AIRQEYRDVV ERRVFTVTGS RPDEETVDNL IETGRSEQIF 240 QDAIQQQGRG QILDTVAEIQ ERHDAVRDLE RKLLELQQVF IDMSVLVDAQ GDMLNNIETH 300 VSNATNHIQQ GVGALQNAKK LQKNSRKWMC YAIILLLIIV VIIVVAVIQP WKKACRSSGY 360 SASPPSSSTS SALKYLPSNR FCRPGLEVAV ACGWIVSGFG DGDGVWEGLY AEESVQRKES 420 SRGGDLGIAL HALIASDMRS LNNQKGQTCG VSDQACHSKS KSDKDGKPSC AKANGVSSLN 480 GSHNDEKILK DNSGACNLNS DHANPLPVDG AKVSIARSEL IDSSEHDGCL HDKNESCMVC 540 DDLLQESDGE QPGGTLEDLF SFNDEEDDDS DWEPSARLAL NRWFCLNCTV PNMEELTHCQ 600 NCDELKGSLV VGYDAFKAHL PLAALLSADT ALPSSTAVGF DERMLLHREI EIKPNPHPER 660 PDRLRAIAAS LAAAGIFPSK CVMVPPREIT KEELLSVHTS DHIDSVEQTK NMLYSYFTSD 720 TYANGHSACA AKLAAGICAD LANLIVSGRV HNGFAMVRPP GHHAGVKQAM GFCLHNNAAV 780 AALAAQRAGA KKVLIVDWVM LVTSLYLNDV HHGNGTQEIF DGDNSVLYIS LHRHEDGSFY 840 PGTGAAHEVG VMDGQGFSVN IPWSSGGVGD NDYIFAFQQV VLPIATEFAP DITIISAGFD 900 AARGDPLGCC DVTPAGYSRM TSMLTSCSKG KLLVILEGGY NLRSISSSAT EVVKVLLGNN 960 PIYTGATEPS EEGIQTVLQV LSIQQQFWPV LIPSFASVLA LQRSVFSKYT SEVNKMKRKH 1020 AGGAGPFWWK WGSKRLLYEV LFEGRCLRKI KDTGKEKFND ETEP 1064Protein Fasta Sequence
>LPERR07G03600.1|Class-I|Leersia perrieri MNNLLSAGRDCFGVAGESECDAVGREGIVQVSLRRGGKTGALGIIALDLLVFVSTQMDSFELPRGNSSRDGDIEMGMHQADPSDNLKGFLKKVDAIEGLIAKLTNLLHKLQAANEESKAVTKARDMKAIKQKMEKDIDEVGKIARMAKTKVDELEKDNLSNRQKPGCGKGSAVDRSREQTTGAVKKKLKERMDDFQVLREAIRQEYRDVVERRVFTVTGSRPDEETVDNLIETGRSEQIFQDAIQQQGRGQILDTVAEIQERHDAVRDLERKLLELQQVFIDMSVLVDAQGDMLNNIETHVSNATNHIQQGVGALQNAKKLQKNSRKWMCYAIILLLIIVVIIVVAVIQPWKKACRSSGYSASPPSSSTSSALKYLPSNRFCRPGLEVAVACGWIVSGFGDGDGVWEGLYAEESVQRKESSRGGDLGIALHALIASDMRSLNNQKGQTCGVSDQACHSKSKSDKDGKPSCAKANGVSSLNGSHNDEKILKDNSGACNLNSDHANPLPVDGAKVSIARSELIDSSEHDGCLHDKNESCMVCDDLLQESDGEQPGGTLEDLFSFNDEEDDDSDWEPSARLALNRWFCLNCTVPNMEELTHCQNCDELKGSLVVGYDAFKAHLPLAALLSADTALPSSTAVGFDERMLLHREIEIKPNPHPERPDRLRAIAASLAAAGIFPSKCVMVPPREITKEELLSVHTSDHIDSVEQTKNMLYSYFTSDTYANGHSACAAKLAAGICADLANLIVSGRVHNGFAMVRPPGHHAGVKQAMGFCLHNNAAVAALAAQRAGAKKVLIVDWVMLVTSLYLNDVHHGNGTQEIFDGDNSVLYISLHRHEDGSFYPGTGAAHEVGVMDGQGFSVNIPWSSGGVGDNDYIFAFQQVVLPIATEFAPDITIISAGFDAARGDPLGCCDVTPAGYSRMTSMLTSCSKGKLLVILEGGYNLRSISSSATEVVKVLLGNNPIYTGATEPSEEGIQTVLQVLSIQQQFWPVLIPSFASVLALQRSVFSKYTSEVNKMKRKHAGGAGPFWWKWGSKRLLYEVLFEGRCLRKIKDTGKEKFNDETEP
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Nucleotide Sequence (Fasta) | ATGAACAATC TCCTCAGCGC GGGAAGGGAT TGCTTCGGCG TGGCGGGGGA ATCGGAATGC 60 GACGCCGTGG GGCGGGAAGG AATCGTCCAG GTTTCCCTGC GGCGTGGCGG AAAAACTGGA 120 GCTCTCGGGA TAATCGCCTT GGATCTGCTG GTTTTTGTTT CGACGCAGAT GGATTCGTTT 180 GAGCTCCCTC GGGGGAACTC TTCAAGAGAT GGGGACATTG AAATGGGAAT GCATCAGGCT 240 GATCCTTCCG ACAATCTAAA AGGTTTCTTG AAAAAGGTTG ACGCAATTGA AGGCCTAATT 300 GCTAAGCTGA CAAATCTCTT GCATAAGCTT CAGGCTGCAA ATGAGGAATC CAAAGCAGTT 360 ACAAAAGCAA GGGACATGAA AGCAATTAAA CAGAAGATGG AGAAAGATAT TGATGAAGTG 420 GGGAAAATTG CTCGCATGGC AAAGACAAAA GTTGATGAAT TGGAAAAAGA TAACTTATCA 480 AATAGACAAA AACCTGGATG TGGGAAGGGA TCTGCGGTAG ATCGATCAAG AGAACAGACT 540 ACTGGAGCAG TGAAAAAGAA ATTGAAGGAG CGCATGGACG ATTTTCAGGT TTTGAGAGAA 600 GCAATACGGC AAGAGTATCG GGACGTTGTT GAAAGAAGGG TGTTTACAGT AACCGGTAGT 660 CGTCCAGATG AAGAGACCGT TGATAATTTA ATAGAGACTG GGAGAAGTGA GCAAATTTTC 720 CAAGATGCTA TCCAACAGCA GGGAAGAGGC CAAATACTGG ACACTGTTGC GGAGATACAA 780 GAGCGTCATG ATGCTGTAAG AGATCTAGAG AGGAAGCTTC TGGAGTTGCA GCAGGTATTC 840 ATAGATATGT CCGTGTTAGT TGACGCTCAA GGAGACATGC TCAACAACAT AGAGACACAT 900 GTTTCAAATG CTACCAACCA CATACAACAA GGGGTTGGCG CTCTCCAGAA TGCGAAGAAG 960 CTCCAGAAGA ACTCGAGGAA GTGGATGTGC TACGCCATCA TCCTCCTGCT CATTATAGTG 1020 GTGATCATCG TCGTCGCTGT CATCCAGCCA TGGAAGAAGG CATGTCGCTC ATCTGGTTAT 1080 TCGGCGTCGC CGCCTTCGTC GTCGACGTCC AGTGCCTTGA AATACTTACC ATCCAACAGG 1140 TTTTGCCGTC CCGGATTAGA GGTAGCTGTA GCGTGTGGAT GGATTGTTTC TGGTTTTGGG 1200 GATGGGGATG GGGTTTGGGA GGGTTTGTAT GCTGAGGAAT CTGTGCAAAG AAAAGAATCG 1260 AGCAGGGGTG GCGATTTGGG CATTGCACTG CATGCTCTAA TAGCATCTGA TATGAGATCA 1320 CTCAACAACC AAAAGGGACA GACCTGCGGA GTTTCTGACC AAGCTTGCCA CAGCAAATCC 1380 AAAAGCGACA AGGATGGAAA GCCATCTTGT GCTAAAGCAA ATGGAGTTTC CTCGTTGAAC 1440 GGGAGTCATA ATGATGAGAA AATTTTGAAA GATAATTCTG GAGCATGCAA TTTAAATTCT 1500 GACCATGCCA ATCCTTTACC AGTAGATGGG GCAAAAGTTT CGATAGCAAG GTCAGAACTT 1560 ATTGACAGTT CAGAGCATGA TGGTTGTCTG CATGACAAGA ATGAAAGCTG TATGGTTTGT 1620 GATGATCTGC TTCAAGAGTC TGACGGAGAA CAACCTGGGG GTACACTGGA GGATCTGTTT 1680 TCCTTTAATG ATGAAGAGGA CGATGACAGT GATTGGGAAC CCTCTGCTCG CCTTGCTTTG 1740 AACAGGTGGT TTTGCTTGAA CTGTACAGTG CCAAACATGG AAGAGCTAAC ACATTGCCAG 1800 AATTGCGACG AGCTTAAGGG ATCTCTGGTA GTTGGATATG ATGCTTTCAA AGCTCATCTT 1860 CCATTGGCAG CTTTGTTATC TGCTGACACA GCACTGCCAT CATCTACAGC TGTCGGTTTT 1920 GATGAAAGAA TGCTGCTTCA TCGTGAGATA GAGATTAAAC CAAATCCACA TCCAGAAAGG 1980 CCTGACCGCC TTCGTGCAAT TGCTGCCAGT CTTGCTGCTG CAGGTATCTT TCCCTCAAAA 2040 TGTGTTATGG TACCTCCTCG AGAAATCACC AAGGAAGAAC TTCTCTCGGT ACATACTTCG 2100 GATCACATTG ACAGTGTCGA ACAGACAAAA AACATGCTTT ACAGTTACTT TACTTCGGAT 2160 ACCTATGCAA ATGGACACTC AGCATGTGCT GCCAAACTTG CAGCAGGGAT ATGTGCTGAT 2220 CTTGCTAACT TGATAGTTTC TGGGCGTGTT CACAATGGAT TTGCAATGGT GAGACCTCCT 2280 GGCCATCATG CAGGGGTGAA ACAAGCCATG GGATTTTGTC TTCATAACAA TGCAGCAGTG 2340 GCTGCATTAG CCGCACAAAG AGCTGGTGCC AAGAAAGTCT TAATAGTTGA CTGGGTAATG 2400 CTAGTTACAA GTTTATATTT GAATGATGTG CACCATGGCA ACGGAACACA GGAGATATTT 2460 GATGGGGACA ATTCTGTCTT GTACATATCA TTACATCGGC ATGAGGATGG AAGCTTCTAC 2520 CCTGGAACTG GGGCAGCACA TGAGGTGGGA GTTATGGATG GCCAAGGATT CTCGGTCAAT 2580 ATACCCTGGA GCAGTGGTGG TGTTGGGGAC AATGATTATA TTTTTGCTTT TCAGCAAGTG 2640 GTCCTTCCGA TAGCTACAGA ATTTGCTCCA GACATCACCA TTATATCTGC AGGATTTGAT 2700 GCAGCAAGGG GTGACCCTCT GGGTTGTTGT GATGTCACCC CTGCTGGATA TTCTAGGATG 2760 ACGTCCATGC TAACTTCCTG TTCAAAGGGA AAACTGTTGG TTATACTTGA GGGAGGATAC 2820 AATCTTCGGT CGATATCCTC ATCAGCTACT GAAGTTGTTA AGGTCCTACT TGGGAATAAT 2880 CCTATTTATA CAGGTGCAAC TGAACCGTCA GAGGAGGGCA TACAGACTGT ATTACAAGTC 2940 CTGAGTATCC AGCAGCAATT TTGGCCAGTT CTGATTCCAT CTTTTGCATC AGTTCTGGCA 3000 CTGCAGCGGT CGGTTTTTTC CAAATATACC AGTGAAGTAA ACAAGATGAA AAGGAAGCAT 3060 GCAGGAGGGG CAGGTCCCTT CTGGTGGAAA TGGGGAAGTA AAAGGCTTCT GTACGAAGTG 3120 CTATTTGAAG GCCGCTGTCT GAGAAAGATC AAGGATACTG GCAAAGAAAA ATTTAATGAT 3180 GAAACGGAGC CCTAA
3196Nucleotide Fasta Sequence
>LPERR07G03600.1|Class-I|Leersia perrieri ATGAACAATCTCCTCAGCGCGGGAAGGGATTGCTTCGGCGTGGCGGGGGAATCGGAATGCGACGCCGTGGGGCGGGAAGGAATCGTCCAGGTTTCCCTGCGGCGTGGCGGAAAAACTGGAGCTCTCGGGATAATCGCCTTGGATCTGCTGGTTTTTGTTTCGACGCAGATGGATTCGTTTGAGCTCCCTCGGGGGAACTCTTCAAGAGATGGGGACATTGAAATGGGAATGCATCAGGCTGATCCTTCCGACAATCTAAAAGGTTTCTTGAAAAAGGTTGACGCAATTGAAGGCCTAATTGCTAAGCTGACAAATCTCTTGCATAAGCTTCAGGCTGCAAATGAGGAATCCAAAGCAGTTACAAAAGCAAGGGACATGAAAGCAATTAAACAGAAGATGGAGAAAGATATTGATGAAGTGGGGAAAATTGCTCGCATGGCAAAGACAAAAGTTGATGAATTGGAAAAAGATAACTTATCAAATAGACAAAAACCTGGATGTGGGAAGGGATCTGCGGTAGATCGATCAAGAGAACAGACTACTGGAGCAGTGAAAAAGAAATTGAAGGAGCGCATGGACGATTTTCAGGTTTTGAGAGAAGCAATACGGCAAGAGTATCGGGACGTTGTTGAAAGAAGGGTGTTTACAGTAACCGGTAGTCGTCCAGATGAAGAGACCGTTGATAATTTAATAGAGACTGGGAGAAGTGAGCAAATTTTCCAAGATGCTATCCAACAGCAGGGAAGAGGCCAAATACTGGACACTGTTGCGGAGATACAAGAGCGTCATGATGCTGTAAGAGATCTAGAGAGGAAGCTTCTGGAGTTGCAGCAGGTATTCATAGATATGTCCGTGTTAGTTGACGCTCAAGGAGACATGCTCAACAACATAGAGACACATGTTTCAAATGCTACCAACCACATACAACAAGGGGTTGGCGCTCTCCAGAATGCGAAGAAGCTCCAGAAGAACTCGAGGAAGTGGATGTGCTACGCCATCATCCTCCTGCTCATTATAGTGGTGATCATCGTCGTCGCTGTCATCCAGCCATGGAAGAAGGCATGTCGCTCATCTGGTTATTCGGCGTCGCCGCCTTCGTCGTCGACGTCCAGTGCCTTGAAATACTTACCATCCAACAGGTTTTGCCGTCCCGGATTAGAGGTAGCTGTAGCGTGTGGATGGATTGTTTCTGGTTTTGGGGATGGGGATGGGGTTTGGGAGGGTTTGTATGCTGAGGAATCTGTGCAAAGAAAAGAATCGAGCAGGGGTGGCGATTTGGGCATTGCACTGCATGCTCTAATAGCATCTGATATGAGATCACTCAACAACCAAAAGGGACAGACCTGCGGAGTTTCTGACCAAGCTTGCCACAGCAAATCCAAAAGCGACAAGGATGGAAAGCCATCTTGTGCTAAAGCAAATGGAGTTTCCTCGTTGAACGGGAGTCATAATGATGAGAAAATTTTGAAAGATAATTCTGGAGCATGCAATTTAAATTCTGACCATGCCAATCCTTTACCAGTAGATGGGGCAAAAGTTTCGATAGCAAGGTCAGAACTTATTGACAGTTCAGAGCATGATGGTTGTCTGCATGACAAGAATGAAAGCTGTATGGTTTGTGATGATCTGCTTCAAGAGTCTGACGGAGAACAACCTGGGGGTACACTGGAGGATCTGTTTTCCTTTAATGATGAAGAGGACGATGACAGTGATTGGGAACCCTCTGCTCGCCTTGCTTTGAACAGGTGGTTTTGCTTGAACTGTACAGTGCCAAACATGGAAGAGCTAACACATTGCCAGAATTGCGACGAGCTTAAGGGATCTCTGGTAGTTGGATATGATGCTTTCAAAGCTCATCTTCCATTGGCAGCTTTGTTATCTGCTGACACAGCACTGCCATCATCTACAGCTGTCGGTTTTGATGAAAGAATGCTGCTTCATCGTGAGATAGAGATTAAACCAAATCCACATCCAGAAAGGCCTGACCGCCTTCGTGCAATTGCTGCCAGTCTTGCTGCTGCAGGTATCTTTCCCTCAAAATGTGTTATGGTACCTCCTCGAGAAATCACCAAGGAAGAACTTCTCTCGGTACATACTTCGGATCACATTGACAGTGTCGAACAGACAAAAAACATGCTTTACAGTTACTTTACTTCGGATACCTATGCAAATGGACACTCAGCATGTGCTGCCAAACTTGCAGCAGGGATATGTGCTGATCTTGCTAACTTGATAGTTTCTGGGCGTGTTCACAATGGATTTGCAATGGTGAGACCTCCTGGCCATCATGCAGGGGTGAAACAAGCCATGGGATTTTGTCTTCATAACAATGCAGCAGTGGCTGCATTAGCCGCACAAAGAGCTGGTGCCAAGAAAGTCTTAATAGTTGACTGGGTAATGCTAGTTACAAGTTTATATTTGAATGATGTGCACCATGGCAACGGAACACAGGAGATATTTGATGGGGACAATTCTGTCTTGTACATATCATTACATCGGCATGAGGATGGAAGCTTCTACCCTGGAACTGGGGCAGCACATGAGGTGGGAGTTATGGATGGCCAAGGATTCTCGGTCAATATACCCTGGAGCAGTGGTGGTGTTGGGGACAATGATTATATTTTTGCTTTTCAGCAAGTGGTCCTTCCGATAGCTACAGAATTTGCTCCAGACATCACCATTATATCTGCAGGATTTGATGCAGCAAGGGGTGACCCTCTGGGTTGTTGTGATGTCACCCCTGCTGGATATTCTAGGATGACGTCCATGCTAACTTCCTGTTCAAAGGGAAAACTGTTGGTTATACTTGAGGGAGGATACAATCTTCGGTCGATATCCTCATCAGCTACTGAAGTTGTTAAGGTCCTACTTGGGAATAATCCTATTTATACAGGTGCAACTGAACCGTCAGAGGAGGGCATACAGACTGTATTACAAGTCCTGAGTATCCAGCAGCAATTTTGGCCAGTTCTGATTCCATCTTTTGCATCAGTTCTGGCACTGCAGCGGTCGGTTTTTTCCAAATATACCAGTGAAGTAAACAAGATGAAAAGGAAGCATGCAGGAGGGGCAGGTCCCTTCTGGTGGAAATGGGGAAGTAAAAGGCTTCTGTACGAAGTGCTATTTGAAGGCCGCTGTCTGAGAAAGATCAAGGATACTGGCAAAGAAAAATTTAATGATGAAACGGAGCCCTAA
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Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |