Tag |
Content |
WERAM ID |
WERAM-Orgl-0069 |
Ensembl Protein ID |
OGLUM07G03480.1 |
Gene Name |
|
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
1.10e-113 |
381 |
258 |
570 |
HDAC |
Class-I |
4.10e-37 |
129.6 |
278 |
563 |
|
Organism |
Oryza glumaepatula |
Domain Profile |
HDAC Class-II
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeaglle.kleelkarkatkeelqlvHseehvelletaeklekeelesltvdsdsiyl 94 +++ +de+ml h+ +e + + hpE+p+R++ai +l++ag+ + k++ + r+ tkeel+ vH+++h++ +e+++++ + + ++y+ OGLUM07G03480.1 258 TAVGFDERMLLHSEIEIKPNPHPERPDRLRAIAASLAAAGIFPsKCVMVPPREITKEELLRVHTSDHIDSVEQTKNMLYSYFT------SDTYA 345 6799***********************************999758*****************************665555444......478** PP class-2.txt 95 esksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkilivDwDvHhGnGtqeifykdpkv 188 + +s+ aa+la+G + +l++ +++g+++ngfa+vRPPGHHa ++amGFCl+nn+avaa +q+ +kk+livDwDvHhGnGtqeif d++v OGLUM07G03480.1 346 NGHSACAAKLAAGICADLANLIVSGRVRNGFAMVRPPGHHAGVKQAMGFCLHNNAAVAALAAQRAG-AKKVLIVDWDVHHGNGTQEIFDGDNSV 438 **********************************************************98777665.5************************** PP class-2.txt 189 lylSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgglsvtakcya 282 ly+SlHR+++gsf+p g+ga++evg +g+gf+vN++w+ g++gd++y++af++vvlpia eF+Pd+ ++saGfDaa+gdplg ++vt+++y+ OGLUM07G03480.1 439 LYISLHRHEDGSFYP--GTGAAHEVGVMDGQGFSVNIPWSRGGVGDNDYIFAFKHVVLPIAAEFAPDITIISAGFDAARGDPLGCCDVTPAGYS 530 ***************..***************************************************************************** PP class-2.txt 283 tltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322 +++ +l+ ++g+++++lEGGynl++i++++++vvk+Llg OGLUM07G03480.1 531 RMASMLTACSQGKLLVILEGGYNLRSISSSATEVVKVLLG 570 **************************************96 PP
HDAC Class-I
class-1.txt 19 khpmkpkrlslth.eLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycqlitGasle 111 hp +p rl+ + +L+ + k +v p++ ++eell++h+ ++i+ +++ ++ + ++ + ++ g+ + + +G + OGLUM07G03480.1 278 PHPERPDRLRAIAaSLAAAGIFPSKCVMVPPREITKEELLRVHTSDHIDSVEQTKNMLYSYFT--SDTYANGHSACAAKLA-------AGICAD 362 5899999998665166666667788889999999999*******9999999887776666666..5567777766555444.......444444 PP class-1.txt 112 aakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellk.khkrvlyididlhhGDgveeafyttdrvmtvsfhkygee.ffPgt 201 a+ + +++ a+ G hha ++a Gfc n+ +a l ++ k+vl +d d+hhG+g +e f + v+ +s+h+++++ f+Pgt OGLUM07G03480.1 363 LANLIVSGRVRngFAMVRPPG-HHAGVKQAMGFCLHNNAAVAALAAQRaGAKKVLIVDWDVHHGNGTQEIFDGDNSVLYISLHRHEDGsFYPGT 455 444444443330044444444.999999**********99999999886799*********************************985499*** PP class-1.txt 202 GdlsdvgaekgkyyavnvPl.kdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksf.nlpllvlGG 293 G ++vg+ +g+ ++vn+P + g+ D+ y fk+v+ ++ f P++ ++ G D+ gD+lg+ +++ g++++ +++ + +llv+ OGLUM07G03480.1 456 GAAHEVGVMDGQGFSVNIPWsRGGVGDNDYIFAFKHVVLPIAAEFAPDITIISAGFDAARGDPLGCCDVTPAGYSRMASMLTACsQGKLLVILE 549 *******************83568*******************************************************999987889****** PP class-1.txt 294 GGYtlrnvaRcwty 307 GGY+lr ++ t OGLUM07G03480.1 550 GGYNLRSISSSATE 563 ******99976665 PP
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Protein Sequence (Fasta) | MAGKDGPTRA EHEAHEPLFT VIPWPRRAPP KIQSREASAA AAAGIALQIA LHALMASDMR 60 SLNSQKGQSC GVSDQACHSK SKSGNDGKPS HAKANGVSSL SGSHNDEKIL KENSGACNLN 120 SDHANPLSVD GTKVSTARSE LIDSSGHDGC LHVKNESCMA CDDLLQESDK EQPGGTLEDL 180 FSFNDEEDDD SDWEPSARLA LSRWFCLNCT VPNMEGFTHC QNCDELKGSV VVGYDAFKAH 240 LARAALLSAD AALPSVSTAV GFDERMLLHS EIEIKPNPHP ERPDRLRAIA ASLAAAGIFP 300 SKCVMVPPRE ITKEELLRVH TSDHIDSVEQ TKNMLYSYFT SDTYANGHSA CAAKLAAGIC 360 ADLANLIVSG RVRNGFAMVR PPGHHAGVKQ AMGFCLHNNA AVAALAAQRA GAKKVLIVDW 420 DVHHGNGTQE IFDGDNSVLY ISLHRHEDGS FYPGTGAAHE VGVMDGQGFS VNIPWSRGGV 480 GDNDYIFAFK HVVLPIAAEF APDITIISAG FDAARGDPLG CCDVTPAGYS RMASMLTACS 540 QGKLLVILEG GYNLRSISSS ATEVVKVLLG DSPVYDTDAT EPSEEGIQTV LQVLSIQQQF 600 WPVLVPSFAS VLALQRSVFS RYTTEVNKMK RKHAGGAGPF WWKWGSKRLL YEVLFEGRCL 660 RKTKDTGKEK LNDEAEP 677Protein Fasta Sequence
>OGLUM07G03480.1|Class-I|Oryza glumaepatula MAGKDGPTRAEHEAHEPLFTVIPWPRRAPPKIQSREASAAAAAGIALQIALHALMASDMRSLNSQKGQSCGVSDQACHSKSKSGNDGKPSHAKANGVSSLSGSHNDEKILKENSGACNLNSDHANPLSVDGTKVSTARSELIDSSGHDGCLHVKNESCMACDDLLQESDKEQPGGTLEDLFSFNDEEDDDSDWEPSARLALSRWFCLNCTVPNMEGFTHCQNCDELKGSVVVGYDAFKAHLARAALLSADAALPSVSTAVGFDERMLLHSEIEIKPNPHPERPDRLRAIAASLAAAGIFPSKCVMVPPREITKEELLRVHTSDHIDSVEQTKNMLYSYFTSDTYANGHSACAAKLAAGICADLANLIVSGRVRNGFAMVRPPGHHAGVKQAMGFCLHNNAAVAALAAQRAGAKKVLIVDWDVHHGNGTQEIFDGDNSVLYISLHRHEDGSFYPGTGAAHEVGVMDGQGFSVNIPWSRGGVGDNDYIFAFKHVVLPIAAEFAPDITIISAGFDAARGDPLGCCDVTPAGYSRMASMLTACSQGKLLVILEGGYNLRSISSSATEVVKVLLGDSPVYDTDATEPSEEGIQTVLQVLSIQQQFWPVLVPSFASVLALQRSVFSRYTTEVNKMKRKHAGGAGPFWWKWGSKRLLYEVLFEGRCLRKTKDTGKEKLNDEAEP
|
Nucleotide Sequence (Fasta) | ATGGCAGGCA AAGACGGACC CACTCGAGCC GAGCACGAAG CGCACGAGCC GCTCTTCACA 60 GTCATCCCGT GGCCGCGCCG CGCCCCTCCA AAAATCCAAT CGCGAGAGGC GAGCGCCGCC 120 GCCGCCGCCG GGATCGCCCT CCAGATTGCG TTGCATGCTC TGATGGCGTC TGATATGAGG 180 TCACTCAACA GCCAAAAGGG ACAGAGTTGT GGAGTTTCAG ACCAAGCTTG CCACAGCAAA 240 AGCAAAAGCG GCAATGATGG AAAACCATCA CATGCTAAAG CAAATGGAGT TTCCTCGTTG 300 AGCGGGAGTC ATAATGATGA GAAAATTTTG AAAGAGAACT CTGGAGCATG CAATTTAAAT 360 TCCGACCATG CCAATCCTTT ATCAGTAGAT GGGACCAAAG TTTCTACAGC AAGGTCGGAA 420 CTTATTGACA GTTCAGGCCA TGATGGTTGT CTGCATGTCA AGAATGAAAG CTGTATGGCT 480 TGTGATGATC TGCTTCAAGA GTCTGACAAA GAACAGCCTG GGGGTACACT GGAGGATCTA 540 TTTTCCTTTA ATGATGAAGA GGATGATGAC AGTGACTGGG AACCCTCTGC TCGCCTTGCT 600 TTGAGCAGGT GGTTTTGCTT GAACTGTACA GTGCCAAACA TGGAGGGGTT TACACATTGT 660 CAGAATTGCG ATGAGCTTAA GGGATCGGTG GTAGTTGGAT ATGATGCTTT CAAAGCTCAT 720 CTTGCACGGG CAGCTTTGTT ATCTGCTGAC GCAGCGCTGC CATCAGTATC TACAGCTGTC 780 GGTTTTGATG AAAGAATGCT GCTCCATAGT GAGATAGAGA TTAAACCAAA TCCACATCCA 840 GAAAGGCCTG ACCGCCTTCG TGCAATCGCT GCCAGTCTTG CTGCTGCAGG TATCTTCCCT 900 TCAAAATGTG TCATGGTACC TCCTCGAGAA ATCACTAAGG AAGAACTCCT AAGGGTCCAT 960 ACTTCAGATC ACATTGACAG TGTTGAGCAG ACAAAGAACA TGCTTTACAG TTACTTCACT 1020 TCAGATACCT ATGCAAATGG ACACTCAGCA TGTGCTGCCA AACTTGCAGC AGGGATATGT 1080 GCTGATCTTG CTAACTTGAT AGTATCTGGG CGTGTTCGCA ATGGATTTGC AATGGTGAGA 1140 CCTCCTGGCC ATCATGCAGG GGTGAAACAA GCCATGGGTT TTTGTCTTCA CAATAATGCA 1200 GCAGTGGCTG CATTAGCTGC ACAAAGAGCT GGTGCCAAGA AAGTCTTAAT AGTTGACTGG 1260 GATGTCCACC ATGGCAATGG AACACAGGAG ATATTTGATG GGGACAATTC TGTCTTGTAC 1320 ATATCATTAC ATCGGCATGA GGATGGAAGC TTCTACCCTG GAACTGGGGC AGCACATGAG 1380 GTGGGAGTTA TGGATGGCCA AGGATTCTCA GTCAATATAC CTTGGAGCCG TGGTGGTGTT 1440 GGAGACAATG ACTACATATT TGCTTTTAAG CATGTGGTGC TTCCGATAGC TGCAGAATTT 1500 GCTCCAGACA TCACCATCAT ATCTGCAGGA TTTGATGCAG CGAGGGGTGA CCCTCTGGGT 1560 TGTTGTGATG TCACACCTGC TGGATATTCT AGGATGGCGT CCATGCTAAC TGCTTGTTCA 1620 CAGGGAAAAT TGTTGGTTAT ACTTGAGGGA GGATACAATC TTCGGTCTAT ATCCTCATCA 1680 GCTACTGAAG TTGTTAAGGT CCTACTTGGG GATAGTCCTG TTTATGATAC AGATGCAACT 1740 GAACCATCAG AGGAGGGCAT ACAGACTGTC TTACAAGTCC TGAGTATCCA GCAGCAATTT 1800 TGGCCAGTTT TAGTTCCATC CTTTGCATCA GTTCTGGCAC TGCAGCGGTC GGTTTTTTCC 1860 AGATATACCA CTGAAGTAAA CAAGATGAAA AGGAAGCATG CAGGAGGGGC AGGACCCTTC 1920 TGGTGGAAAT GGGGGAGTAA AAGGCTACTG TACGAAGTGC TATTTGAGGG CCGCTGTCTG 1980 AGGAAAACCA AGGATACAGG CAAAGAAAAA TTGAATGATG AAGCAGAGCC CTAAAT
2037Nucleotide Fasta Sequence
>OGLUM07G03480.1|Class-I|Oryza glumaepatula ATGGCAGGCAAAGACGGACCCACTCGAGCCGAGCACGAAGCGCACGAGCCGCTCTTCACAGTCATCCCGTGGCCGCGCCGCGCCCCTCCAAAAATCCAATCGCGAGAGGCGAGCGCCGCCGCCGCCGCCGGGATCGCCCTCCAGATTGCGTTGCATGCTCTGATGGCGTCTGATATGAGGTCACTCAACAGCCAAAAGGGACAGAGTTGTGGAGTTTCAGACCAAGCTTGCCACAGCAAAAGCAAAAGCGGCAATGATGGAAAACCATCACATGCTAAAGCAAATGGAGTTTCCTCGTTGAGCGGGAGTCATAATGATGAGAAAATTTTGAAAGAGAACTCTGGAGCATGCAATTTAAATTCCGACCATGCCAATCCTTTATCAGTAGATGGGACCAAAGTTTCTACAGCAAGGTCGGAACTTATTGACAGTTCAGGCCATGATGGTTGTCTGCATGTCAAGAATGAAAGCTGTATGGCTTGTGATGATCTGCTTCAAGAGTCTGACAAAGAACAGCCTGGGGGTACACTGGAGGATCTATTTTCCTTTAATGATGAAGAGGATGATGACAGTGACTGGGAACCCTCTGCTCGCCTTGCTTTGAGCAGGTGGTTTTGCTTGAACTGTACAGTGCCAAACATGGAGGGGTTTACACATTGTCAGAATTGCGATGAGCTTAAGGGATCGGTGGTAGTTGGATATGATGCTTTCAAAGCTCATCTTGCACGGGCAGCTTTGTTATCTGCTGACGCAGCGCTGCCATCAGTATCTACAGCTGTCGGTTTTGATGAAAGAATGCTGCTCCATAGTGAGATAGAGATTAAACCAAATCCACATCCAGAAAGGCCTGACCGCCTTCGTGCAATCGCTGCCAGTCTTGCTGCTGCAGGTATCTTCCCTTCAAAATGTGTCATGGTACCTCCTCGAGAAATCACTAAGGAAGAACTCCTAAGGGTCCATACTTCAGATCACATTGACAGTGTTGAGCAGACAAAGAACATGCTTTACAGTTACTTCACTTCAGATACCTATGCAAATGGACACTCAGCATGTGCTGCCAAACTTGCAGCAGGGATATGTGCTGATCTTGCTAACTTGATAGTATCTGGGCGTGTTCGCAATGGATTTGCAATGGTGAGACCTCCTGGCCATCATGCAGGGGTGAAACAAGCCATGGGTTTTTGTCTTCACAATAATGCAGCAGTGGCTGCATTAGCTGCACAAAGAGCTGGTGCCAAGAAAGTCTTAATAGTTGACTGGGATGTCCACCATGGCAATGGAACACAGGAGATATTTGATGGGGACAATTCTGTCTTGTACATATCATTACATCGGCATGAGGATGGAAGCTTCTACCCTGGAACTGGGGCAGCACATGAGGTGGGAGTTATGGATGGCCAAGGATTCTCAGTCAATATACCTTGGAGCCGTGGTGGTGTTGGAGACAATGACTACATATTTGCTTTTAAGCATGTGGTGCTTCCGATAGCTGCAGAATTTGCTCCAGACATCACCATCATATCTGCAGGATTTGATGCAGCGAGGGGTGACCCTCTGGGTTGTTGTGATGTCACACCTGCTGGATATTCTAGGATGGCGTCCATGCTAACTGCTTGTTCACAGGGAAAATTGTTGGTTATACTTGAGGGAGGATACAATCTTCGGTCTATATCCTCATCAGCTACTGAAGTTGTTAAGGTCCTACTTGGGGATAGTCCTGTTTATGATACAGATGCAACTGAACCATCAGAGGAGGGCATACAGACTGTCTTACAAGTCCTGAGTATCCAGCAGCAATTTTGGCCAGTTTTAGTTCCATCCTTTGCATCAGTTCTGGCACTGCAGCGGTCGGTTTTTTCCAGATATACCACTGAAGTAAACAAGATGAAAAGGAAGCATGCAGGAGGGGCAGGACCCTTCTGGTGGAAATGGGGGAGTAAAAGGCTACTGTACGAAGTGCTATTTGAGGGCCGCTGTCTGAGGAAAACCAAGGATACAGGCAAAGAAAAATTGAATGATGAAGCAGAGCCCTAAAT
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |