Tag |
Content |
WERAM ID |
WERAM-Glm-0224 |
Ensembl Protein ID |
GLYMA17G13000.1 |
Gene Name |
GLYMA_17G120900 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
7.70e-115 |
385.3 |
148 |
460 |
HDAC |
Class-I |
3.30e-33 |
117.4 |
273 |
454 |
|
Organism |
Glycine max |
Domain Profile |
HDAC Class-II
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeaglle.kleelkarkatkeelqlvHseehvelletaeklekeelesltvdsdsiyl 94 +++ +de+ml h+ +e++++ hpE+p+R+qai +l++ag+ + k+ ++ ar+ t eel +vHs eh+e +e ++ e+l+s + ++y+ GLYMA17G13000.1 148 TAIGFDERMLLHAEVEKKSTLHPERPDRLQAIAASLARAGIFPgKCYSIPAREITPEELITVHSLEHIESVEVTS----ESLSS--YFTSDTYA 235 6789***********************************999779***************************994....44443..233478** PP class-2.txt 95 esksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkilivDwDvHhGnGtqeifykdpkv 188 +++s+ aarla+G + +l++++++ ++kngfa+vRPPGHHa ++amGFCl+nn+avaa +q + +k+li+DwDvHhGnGtqeif+++++v GLYMA17G13000.1 236 NEHSALAARLAAGLCADLASAIVSERAKNGFALVRPPGHHAGVRHAMGFCLHNNAAVAALAAQAAGA-RKVLILDWDVHHGNGTQEIFEQNKSV 328 **********************************************************988777665.************************** PP class-2.txt 189 lylSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgglsvtakcya 282 ly+SlHR++ g+f+p g+ga++evg+ +eg+ vN++w+ g++gd++y++ f++vvlpia eF+Pd+ +vsaGfDaa+gdplg +++t+++ya GLYMA17G13000.1 329 LYISLHRHEGGKFYP--GTGAAEEVGSMGAEGYCVNIPWSRGGVGDNDYIFSFQHVVLPIAAEFNPDFTIVSAGFDAARGDPLGCCDITPSGYA 420 ***************..***************************************************************************** PP class-2.txt 283 tltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322 ++t++l l+gg+++++lEGGynl++i+++++av+k+Llg GLYMA17G13000.1 421 HMTHMLNALSGGKLLVILEGGYNLRSISSSATAVIKVLLG 460 **************************************96 PP
HDAC Class-I
class-1.txt 131 lhhakkseasGfcyvnDivlailellk.khkrvlyididlhhGDgveeafyttdrvmtvsfhkyge.effPgtGdlsdvgaekgkyyavnvPl. 221 hha ++a Gfc n+ +a l + ++vl +d d+hhG+g +e f++ + v+ +s+h+++ +f+PgtG ++vg y+vn+P GLYMA17G13000.1 273 GHHAGVRHAMGFCLHNNAAVAALAAQAaGARKVLILDWDVHHGNGTQEIFEQNKSVLYISLHRHEGgKFYPGTGAAEEVGSMGAEGYCVNIPWs 366 39***************999999888747899*******************************97527************************83 PP class-1.txt 222 kdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksf.nlpllvlGGGGYtlrnvaRcwtye 308 + g+ D+ y f++v+ ++ f+P+ ++ G D+ gD+lg+ +++ +g+a++ +++ +llv+ GGY+lr ++ t GLYMA17G13000.1 367 RGGVGDNDYIFSFQHVVLPIAAEFNPDFTIVSAGFDAARGDPLGCCDITPSGYAHMTHMLNALsGGKLLVILEGGYNLRSISSSATAV 454 568***********************************************************97789************999776655 PP
|
Protein Sequence (Fasta) | MVSGALKTTE NSLHKQASQV SDANDAVADP DIPAKRARLQ KEQKDLTFQD IYQNDGVFDD 60 EDSDWEPFQL HKCMDFEIKK WFCRNCTMVN LDHDDCCYIC GEHTDSKILS HGFFASPLAQ 120 DENLTEVQGI AKGLKDVGSQ ELVANSSTAI GFDERMLLHA EVEKKSTLHP ERPDRLQAIA 180 ASLARAGIFP GKCYSIPARE ITPEELITVH SLEHIESVEV TSESLSSYFT SDTYANEHSA 240 LAARLAAGLC ADLASAIVSE RAKNGFALVR PPGHHAGVRH AMGFCLHNNA AVAALAAQAA 300 GARKVLILDW DVHHGNGTQE IFEQNKSVLY ISLHRHEGGK FYPGTGAAEE VGSMGAEGYC 360 VNIPWSRGGV GDNDYIFSFQ HVVLPIAAEF NPDFTIVSAG FDAARGDPLG CCDITPSGYA 420 HMTHMLNALS GGKLLVILEG GYNLRSISSS ATAVIKVLLG ESPGCELENS FPSKAGLQTV 480 LEVLKIQMNF WPALGPIFVT LESQWRVYCF GKKRKHIKKR HRILVPMWRW GRKFIIPFSE 540 RPP 543Protein Fasta Sequence
>GLYMA17G13000.1|Class-I|Glycine max MVSGALKTTENSLHKQASQVSDANDAVADPDIPAKRARLQKEQKDLTFQDIYQNDGVFDDEDSDWEPFQLHKCMDFEIKKWFCRNCTMVNLDHDDCCYICGEHTDSKILSHGFFASPLAQDENLTEVQGIAKGLKDVGSQELVANSSTAIGFDERMLLHAEVEKKSTLHPERPDRLQAIAASLARAGIFPGKCYSIPAREITPEELITVHSLEHIESVEVTSESLSSYFTSDTYANEHSALAARLAAGLCADLASAIVSERAKNGFALVRPPGHHAGVRHAMGFCLHNNAAVAALAAQAAGARKVLILDWDVHHGNGTQEIFEQNKSVLYISLHRHEGGKFYPGTGAAEEVGSMGAEGYCVNIPWSRGGVGDNDYIFSFQHVVLPIAAEFNPDFTIVSAGFDAARGDPLGCCDITPSGYAHMTHMLNALSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCELENSFPSKAGLQTVLEVLKIQMNFWPALGPIFVTLESQWRVYCFGKKRKHIKKRHRILVPMWRWGRKFIIPFSERPP
|
Nucleotide Sequence (Fasta) | CTCAGATTGG GTCTATGCTT GTCTAATTCA TATTTCCTAA AAAGAACAGA AAAAACATGT 60 CATATAATAG TGTTGTTCCC TTCGTACCCT AAGCCAATAC GTCAAACGGT GAATCTTGCA 120 CACACGGGTA CTTCCTCCAA ACCAACATTA TGAACCCTAC TCTTTTCACT AAACCCTCTT 180 CTTCACTTCT CCCTCTTTCA ATTCCCAGTT AGTTCCAACC GCTTCCTTCG CAAAGCTGCT 240 TGCTAGGTTT TCGAATAATG GTTAGTGGAG CTCTCAAAAC GACTGAGAAC AGTCTTCACA 300 AGCAAGCTTC TCAGGTTTCC GATGCCAATG ATGCAGTTGC TGACCCTGAT ATTCCTGCAA 360 AGAGAGCCAG GCTGCAGAAG GAACAGAAGG ATTTGACCTT TCAGGACATA TATCAAAATG 420 ATGGCGTGTT TGACGACGAA GACAGTGATT GGGAGCCGTT TCAGTTACAC AAGTGTATGG 480 ATTTTGAAAT CAAAAAGTGG TTCTGCAGAA ATTGTACCAT GGTTAACCTC GATCACGATG 540 ACTGTTGCTA CATATGCGGG GAGCATACGG ATTCTAAAAT CCTTAGCCAT GGGTTTTTTG 600 CATCTCCTTT AGCCCAAGAT GAGAATCTGA CTGAAGTCCA GGGGATCGCT AAAGGACTGA 660 AAGATGTTGG CTCACAGGAA TTAGTGGCAA ATAGTTCTAC AGCAATCGGC TTTGATGAGA 720 GAATGTTGTT ACATGCAGAA GTTGAAAAGA AATCCACTCT GCATCCTGAG AGGCCAGATC 780 GTCTTCAAGC AATTGCTGCT AGTCTTGCTA GAGCTGGCAT ATTTCCTGGA AAATGCTATT 840 CAATTCCTGC TAGAGAAATC ACACCAGAAG AACTTATTAC GGTTCATTCC TTGGAGCATA 900 TTGAATCTGT GGAAGTTACA AGCGAATCAC TTTCTAGTTA TTTCACTTCT GACACATATG 960 CCAATGAGCA TTCAGCACTT GCTGCTAGGT TGGCAGCTGG GTTATGTGCT GATCTAGCAT 1020 CAGCAATTGT TTCTGAGCGA GCCAAAAATG GATTTGCTTT GGTTAGGCCT CCTGGTCATC 1080 ATGCTGGTGT AAGACATGCA ATGGGGTTCT GCCTTCACAA TAATGCTGCT GTGGCTGCAT 1140 TGGCAGCTCA AGCTGCAGGG GCTAGGAAGG TGCTAATTTT GGATTGGGAT GTTCATCACG 1200 GAAATGGGAC ACAAGAAATA TTTGAACAAA ACAAATCGGT CTTGTATATA TCATTGCATA 1260 GACACGAGGG AGGAAAATTT TATCCTGGTA CTGGAGCTGC TGAAGAGGTT GGTAGTATGG 1320 GTGCAGAAGG ATACTGTGTG AATATTCCAT GGAGTCGAGG AGGAGTTGGT GACAATGACT 1380 ATATTTTTTC ATTTCAGCAT GTTGTCCTTC CTATAGCTGC TGAGTTTAAT CCAGATTTTA 1440 CCATAGTATC TGCTGGATTT GATGCTGCAA GAGGTGATCC CCTAGGATGT TGCGATATTA 1500 CTCCCTCTGG CTATGCACAT ATGACACATA TGTTGAATGC CCTTTCTGGC GGAAAATTGC 1560 TTGTTATTCT TGAGGGGGGC TATAATCTTC GTTCTATATC ATCTTCTGCA ACTGCAGTAA 1620 TCAAGGTATT ACTGGGTGAG AGTCCTGGAT GTGAACTGGA AAATAGTTTC CCTTCCAAAG 1680 CTGGCCTGCA AACTGTTTTG GAAGTCCTCA AAATTCAGAT GAACTTTTGG CCTGCCCTGG 1740 GTCCCATTTT TGTGACTTTG GAGTCACAAT GGAGGGTGTA CTGTTTTGGA AAAAAAAGGA 1800 AACATATTAA GAAACGACAC CGAATTCTGG TTCCAATGTG GAGGTGGGGA CGAAAGTTTA 1860 TTATTCCATT TTCTGAACGG CCACCTTAAT GTAAAATCAA AATTATGTTG AGCTGATGAA 1920 TTTTGTAAGC ATGGGAAATA CATAGTAGTT ATCAGCATGC TGTACATTCC ATCTTCAGGA 1980 CAATATGATT TTTGTTTGAT CGTGCAAATG ATAGATTTGT GCGTAAGGGT GAGACAAATC 2040 GGGGAAAGAA GGGGAGGGTG GCAAGTGTTA AAGGATAAAA ATGATTTCCC AGTTCCTTGT 2100 TTGATCATTG AATTTTGATA GTTTACCAAC TGGGAAATAT GAGAAATTAA AGCACTTTCT 2160 GCTCCAACAA AAAAAACTTG TGGCAAATTC AAAGATGTGT GGTGGTGACA TGTCATCTTT 2220 TATTTTCATT GTTTCTGGTT TAAATCCAAA AACTTATAAA CAAGTTTGAA TACTTTTGCG 2280 GCATTAGTTG AAGTAAAACT GAAAACAAGA TCTATCTTAA CATGGGTTAA TATGCTGCTG 2340 TCTTGTGGCC TTGTTTTTTA GTTATTTATA TAACCATCTC AATAAAGTGG CTTTCATCCA 2400 CTGGTTGATA GTCTTGAGAA GCATAACCTT TCAATTTGAT ACGTACAGAA TTTTTCATTC 2460 TTGAACGTTA CAACTGAGTT TTCAGTTGGT CAGGCGCAGT AGCCACTTGG TATAATTTGG 2520 GAGACAATGG TTCTGCCAGT TGTGGACTAA GCTTAAGTGG TAAGTTGCAT TTGGTTTTGT 2580 CCTGGGGGAC TTAATATGCT TAATCTCTAC TGTTACGGAA CAGCTGACAA TGGAAGCAAA 2640 CAAATTGTTG CCTATCTTGT TTGGCACCCT TTACACGAAC TGAACTTTAT TGAGCTGTAT 2700 ATGTGGATCT TGTCCGAAAT AATTTGAGGG TTTCCAGTCC AGGGTTCTTT GTATGAGCCA 2760 GAGGATGGAG ATGGAATGGA GGTGATGGCA AACATAGACA TAGATATAGC AGTAGACATA 2820 AAGCCACCAA TTCCTCCCTC TCTCCTCTAT AAAACTCAGA TATCTTGTGC TTGACTCAAT 2880 ATGAATTTGA ATGCTTTTAA TGAAGATCAA GTTACTTATT GTT
2924Nucleotide Fasta Sequence
>GLYMA17G13000.1|Class-I|Glycine max CTCAGATTGGGTCTATGCTTGTCTAATTCATATTTCCTAAAAAGAACAGAAAAAACATGTCATATAATAGTGTTGTTCCCTTCGTACCCTAAGCCAATACGTCAAACGGTGAATCTTGCACACACGGGTACTTCCTCCAAACCAACATTATGAACCCTACTCTTTTCACTAAACCCTCTTCTTCACTTCTCCCTCTTTCAATTCCCAGTTAGTTCCAACCGCTTCCTTCGCAAAGCTGCTTGCTAGGTTTTCGAATAATGGTTAGTGGAGCTCTCAAAACGACTGAGAACAGTCTTCACAAGCAAGCTTCTCAGGTTTCCGATGCCAATGATGCAGTTGCTGACCCTGATATTCCTGCAAAGAGAGCCAGGCTGCAGAAGGAACAGAAGGATTTGACCTTTCAGGACATATATCAAAATGATGGCGTGTTTGACGACGAAGACAGTGATTGGGAGCCGTTTCAGTTACACAAGTGTATGGATTTTGAAATCAAAAAGTGGTTCTGCAGAAATTGTACCATGGTTAACCTCGATCACGATGACTGTTGCTACATATGCGGGGAGCATACGGATTCTAAAATCCTTAGCCATGGGTTTTTTGCATCTCCTTTAGCCCAAGATGAGAATCTGACTGAAGTCCAGGGGATCGCTAAAGGACTGAAAGATGTTGGCTCACAGGAATTAGTGGCAAATAGTTCTACAGCAATCGGCTTTGATGAGAGAATGTTGTTACATGCAGAAGTTGAAAAGAAATCCACTCTGCATCCTGAGAGGCCAGATCGTCTTCAAGCAATTGCTGCTAGTCTTGCTAGAGCTGGCATATTTCCTGGAAAATGCTATTCAATTCCTGCTAGAGAAATCACACCAGAAGAACTTATTACGGTTCATTCCTTGGAGCATATTGAATCTGTGGAAGTTACAAGCGAATCACTTTCTAGTTATTTCACTTCTGACACATATGCCAATGAGCATTCAGCACTTGCTGCTAGGTTGGCAGCTGGGTTATGTGCTGATCTAGCATCAGCAATTGTTTCTGAGCGAGCCAAAAATGGATTTGCTTTGGTTAGGCCTCCTGGTCATCATGCTGGTGTAAGACATGCAATGGGGTTCTGCCTTCACAATAATGCTGCTGTGGCTGCATTGGCAGCTCAAGCTGCAGGGGCTAGGAAGGTGCTAATTTTGGATTGGGATGTTCATCACGGAAATGGGACACAAGAAATATTTGAACAAAACAAATCGGTCTTGTATATATCATTGCATAGACACGAGGGAGGAAAATTTTATCCTGGTACTGGAGCTGCTGAAGAGGTTGGTAGTATGGGTGCAGAAGGATACTGTGTGAATATTCCATGGAGTCGAGGAGGAGTTGGTGACAATGACTATATTTTTTCATTTCAGCATGTTGTCCTTCCTATAGCTGCTGAGTTTAATCCAGATTTTACCATAGTATCTGCTGGATTTGATGCTGCAAGAGGTGATCCCCTAGGATGTTGCGATATTACTCCCTCTGGCTATGCACATATGACACATATGTTGAATGCCCTTTCTGGCGGAAAATTGCTTGTTATTCTTGAGGGGGGCTATAATCTTCGTTCTATATCATCTTCTGCAACTGCAGTAATCAAGGTATTACTGGGTGAGAGTCCTGGATGTGAACTGGAAAATAGTTTCCCTTCCAAAGCTGGCCTGCAAACTGTTTTGGAAGTCCTCAAAATTCAGATGAACTTTTGGCCTGCCCTGGGTCCCATTTTTGTGACTTTGGAGTCACAATGGAGGGTGTACTGTTTTGGAAAAAAAAGGAAACATATTAAGAAACGACACCGAATTCTGGTTCCAATGTGGAGGTGGGGACGAAAGTTTATTATTCCATTTTCTGAACGGCCACCTTAATGTAAAATCAAAATTATGTTGAGCTGATGAATTTTGTAAGCATGGGAAATACATAGTAGTTATCAGCATGCTGTACATTCCATCTTCAGGACAATATGATTTTTGTTTGATCGTGCAAATGATAGATTTGTGCGTAAGGGTGAGACAAATCGGGGAAAGAAGGGGAGGGTGGCAAGTGTTAAAGGATAAAAATGATTTCCCAGTTCCTTGTTTGATCATTGAATTTTGATAGTTTACCAACTGGGAAATATGAGAAATTAAAGCACTTTCTGCTCCAACAAAAAAAACTTGTGGCAAATTCAAAGATGTGTGGTGGTGACATGTCATCTTTTATTTTCATTGTTTCTGGTTTAAATCCAAAAACTTATAAACAAGTTTGAATACTTTTGCGGCATTAGTTGAAGTAAAACTGAAAACAAGATCTATCTTAACATGGGTTAATATGCTGCTGTCTTGTGGCCTTGTTTTTTAGTTATTTATATAACCATCTCAATAAAGTGGCTTTCATCCACTGGTTGATAGTCTTGAGAAGCATAACCTTTCAATTTGATACGTACAGAATTTTTCATTCTTGAACGTTACAACTGAGTTTTCAGTTGGTCAGGCGCAGTAGCCACTTGGTATAATTTGGGAGACAATGGTTCTGCCAGTTGTGGACTAAGCTTAAGTGGTAAGTTGCATTTGGTTTTGTCCTGGGGGACTTAATATGCTTAATCTCTACTGTTACGGAACAGCTGACAATGGAAGCAAACAAATTGTTGCCTATCTTGTTTGGCACCCTTTACACGAACTGAACTTTATTGAGCTGTATATGTGGATCTTGTCCGAAATAATTTGAGGGTTTCCAGTCCAGGGTTCTTTGTATGAGCCAGAGGATGGAGATGGAATGGAGGTGATGGCAAACATAGACATAGATATAGCAGTAGACATAAAGCCACCAATTCCTCCCTCTCTCCTCTATAAAACTCAGATATCTTGTGCTTGACTCAATATGAATTTGAATGCTTTTAATGAAGATCAAGTTACTTATTGTT
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |