Tag |
Content |
WERAM ID |
WERAM-Orbr-0079 |
Ensembl Protein ID |
OB07G13070.1 |
Gene Name |
|
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
3.60e-114 |
381.9 |
204 |
516 |
HDAC |
Class-I |
4.70e-37 |
128.9 |
224 |
509 |
|
Organism |
Oryza brachyantha |
Domain Profile |
HDAC Class-II
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeaglle.kleelkarkatkeelqlvHseehvelletaeklekeelesltvdsdsiylesk 97 +++ +de+ml h+ +e + + hpE+p+R++ai +l++ag+ + k++ + r+ tkeel++ H+++h++ +e+++++ + + ++y++ + OB07G13070.1 204 TAVGFDERMLLHSEIEIKPNPHPERPDRLRAIAASLAAAGIFPsKCVMVPPREITKEELLTAHTSDHIDSVEQTKNMLYSYFT------SDTYANGH 294 6799***********************************999758*****************************665555444......478***** PP class-2.txt 98 sikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkilivDwDvHhGnGtqeifykdpkvlylSlH 194 s+ aa+la+G + +l++ +++g+++ngfa+vRPPGHHa ++amGFCl+nn+avaa +q+ +kk+livDwDvHhGnGtqeif d++vly+SlH OB07G13070.1 295 SACAAKLAAGICADLASLIVSGHARNGFAMVRPPGHHAGVKQAMGFCLHNNAAVAALAAQRAG-AKKVLIVDWDVHHGNGTQEIFDGDNSVLYISLH 390 *******************************************************98777665.5******************************** PP class-2.txt 195 RydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgglsvtakcyatltkqllkl 291 R+++gsf+p g+ga++evg +g+gf+vN++w+ g++gd++y++af++vvlpia eF+Pd+ ++saGfDaa+gdplg ++vt+++y+++t +l+ OB07G13070.1 391 RHEDGSFYP--GTGAAHEVGVMDGQGFSVNIPWSRGGVGDNDYIFAFQHVVLPIAAEFAPDITIISAGFDAARGDPLGCCDVTPAGYSRMTSMLTAC 485 *********..************************************************************************************** PP class-2.txt 292 aggrvvlvlEGGynlkaiaeaveavvkaLlg 322 ++g+++++lEGGynl++i++++++vvk+Llg OB07G13070.1 486 SQGKLLVILEGGYNLRSISSSATEVVKVLLG 516 *****************************96 PP
HDAC Class-I
class-1.txt 19 khpmkpkrlslth.eLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycqlitGasleaak 114 hp +p rl+ + +L+ + k +v p++ ++eell+ h+ ++i+ +++ ++ + ++ + ++ g+ + + c+ a+ OB07G13070.1 224 PHPERPDRLRAIAaSLAAAGIFPSKCVMVPPREITKEELLTAHTSDHIDSVEQTKNMLYSYFT--SDTYANGHSACAAKLAAGICADL-------AS 311 588899999866415666666778888899999999999999999999998887776666666..56677777666655555555444.......33 PP class-1.txt 115 kLnkke..adiainwaGGlhhakkseasGfcyvnDivlailellk.khkrvlyididlhhGDgveeafyttdrvmtvsfhkygee.ffPgtGdlsdv 207 + +++ + a+ G hha ++a Gfc n+ +a l ++ k+vl +d d+hhG+g +e f + v+ +s+h+++++ f+PgtG ++v OB07G13070.1 312 LIVSGHarNGFAMVRPPG-HHAGVKQAMGFCLHNNAAVAALAAQRaGAKKVLIVDWDVHHGNGTQEIFDGDNSVLYISLHRHEDGsFYPGTGAAHEV 407 333333003445444444.999999**********99999999886799*********************************985499********* PP class-1.txt 208 gaekgkyyavnvPl.kdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksf.nlpllvlGGGGYtlrnva 302 g+ +g+ ++vn+P + g+ D+ y f++v+ ++ f P++ ++ G D+ gD+lg+ +++ g++++ +++ + +llv+ GGY+lr ++ OB07G13070.1 408 GVMDGQGFSVNIPWsRGGVGDNDYIFAFQHVVLPIAAEFAPDITIISAGFDAARGDPLGCCDVTPAGYSRMTSMLTACsQGKLLVILEGGYNLRSIS 504 *************83568*******************************************************999987889************999 PP class-1.txt 303 Rcwty 307 t OB07G13070.1 505 SSATE 509 76665 PP
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Protein Sequence (Fasta) | MTSDMRPLNS QKGQTCGVSD QACHSKSKND NDGKPSRAKV NGVSSLSGSH NDEKFLKENS 60 GACNLNSDHA NSLSVDGVRV SIARSELIDN SDHDGCLHVK NESCMACDDL LQESDGEQHG 120 GTLEDLFSFN DEEDDDSDWE PSARLALDRW FCLNCTVPNM EDFAHCQNCN ELKGSAVVGY 180 DAFKAHLAQA AFLSSDTALP SVSTAVGFDE RMLLHSEIEI KPNPHPERPD RLRAIAASLA 240 AAGIFPSKCV MVPPREITKE ELLTAHTSDH IDSVEQTKNM LYSYFTSDTY ANGHSACAAK 300 LAAGICADLA SLIVSGHARN GFAMVRPPGH HAGVKQAMGF CLHNNAAVAA LAAQRAGAKK 360 VLIVDWDVHH GNGTQEIFDG DNSVLYISLH RHEDGSFYPG TGAAHEVGVM DGQGFSVNIP 420 WSRGGVGDND YIFAFQHVVL PIAAEFAPDI TIISAGFDAA RGDPLGCCDV TPAGYSRMTS 480 MLTACSQGKL LVILEGGYNL RSISSSATEV VKVLLGDNPI YHTGATEPSE EGIQTVLQVL 540 SIQQQFWPVL VPSFASVLSL QRSVFSKYTS EGNKKRKHAG GAGPFWWKWG SKRLLYEVLF 600 EGRCLRKIKD TCKEKSNDEA EP 622Protein Fasta Sequence
>OB07G13070.1|Class-I|Oryza brachyantha MTSDMRPLNSQKGQTCGVSDQACHSKSKNDNDGKPSRAKVNGVSSLSGSHNDEKFLKENSGACNLNSDHANSLSVDGVRVSIARSELIDNSDHDGCLHVKNESCMACDDLLQESDGEQHGGTLEDLFSFNDEEDDDSDWEPSARLALDRWFCLNCTVPNMEDFAHCQNCNELKGSAVVGYDAFKAHLAQAAFLSSDTALPSVSTAVGFDERMLLHSEIEIKPNPHPERPDRLRAIAASLAAAGIFPSKCVMVPPREITKEELLTAHTSDHIDSVEQTKNMLYSYFTSDTYANGHSACAAKLAAGICADLASLIVSGHARNGFAMVRPPGHHAGVKQAMGFCLHNNAAVAALAAQRAGAKKVLIVDWDVHHGNGTQEIFDGDNSVLYISLHRHEDGSFYPGTGAAHEVGVMDGQGFSVNIPWSRGGVGDNDYIFAFQHVVLPIAAEFAPDITIISAGFDAARGDPLGCCDVTPAGYSRMTSMLTACSQGKLLVILEGGYNLRSISSSATEVVKVLLGDNPIYHTGATEPSEEGIQTVLQVLSIQQQFWPVLVPSFASVLSLQRSVFSKYTSEGNKKRKHAGGAGPFWWKWGSKRLLYEVLFEGRCLRKIKDTCKEKSNDEAEP
|
Nucleotide Sequence (Fasta) | ATTGCACTGC ATGCTCTGAT GACATCTGAT ATGAGACCAC TCAACAGCCA AAAGGGTCAG 60 ACCTGTGGAG TTTCTGACCA AGCTTGCCAC AGCAAAAGCA AAAACGACAA TGATGGAAAA 120 CCATCACGTG CTAAAGTGAA TGGAGTTTCC TCGTTGAGCG GGAGCCATAA TGATGAGAAA 180 TTTTTGAAAG AGAACTCTGG AGCATGCAAT TTAAATTCTG ACCATGCCAA TTCTTTATCA 240 GTAGATGGGG TCAGAGTTTC TATAGCAAGG TCAGAACTAA TTGACAATTC AGATCATGAT 300 GGTTGTCTGC ATGTCAAGAA TGAAAGCTGT ATGGCTTGTG ATGATCTGCT TCAAGAGTCT 360 GACGGAGAAC AACATGGGGG TACACTGGAG GATCTATTTT CCTTTAATGA CGAGGAGGAT 420 GATGACAGTG ATTGGGAACC CTCTGCTCGC CTTGCTTTGG ACAGGTGGTT TTGCTTGAAC 480 TGTACAGTGC CAAATATGGA AGATTTTGCA CATTGCCAGA ATTGCAATGA GCTTAAAGGA 540 TCTGCAGTAG TTGGATATGA TGCTTTCAAA GCTCATCTTG CACAGGCAGC TTTTTTATCT 600 TCTGACACAG CACTGCCATC GGTATCCACA GCTGTCGGTT TTGATGAAAG AATGCTGCTC 660 CATAGTGAGA TAGAGATTAA ACCAAATCCA CATCCAGAAA GGCCTGACCG CCTTCGTGCA 720 ATTGCTGCTA GTCTTGCTGC CGCAGGTATC TTTCCCTCTA AATGTGTTAT GGTACCTCCT 780 CGAGAAATCA CGAAGGAAGA ACTCCTAACA GCCCATACTT CAGATCACAT TGACAGTGTT 840 GAGCAGACAA AAAACATGCT TTACAGTTAC TTCACTTCGG ATACATATGC AAATGGACAC 900 TCAGCATGTG CTGCCAAACT TGCAGCAGGG ATATGTGCTG ATCTTGCTAG CTTGATAGTT 960 TCTGGGCATG CTCGTAATGG ATTTGCAATG GTGAGGCCTC CTGGGCATCA TGCTGGGGTG 1020 AAGCAAGCCA TGGGATTTTG TCTTCACAAC AATGCAGCAG TGGCTGCATT AGCTGCACAA 1080 AGAGCTGGTG CCAAGAAAGT ATTAATAGTT GACTGGGATG TGCACCATGG TAATGGAACA 1140 CAGGAGATAT TTGATGGGGA CAATTCTGTC TTGTACATAT CACTACATCG TCATGAGGAT 1200 GGAAGTTTCT ACCCTGGAAC TGGGGCAGCA CATGAGGTTG GAGTTATGGA TGGCCAAGGA 1260 TTCTCGGTCA ATATACCTTG GAGCCGTGGT GGTGTTGGAG ACAATGACTA CATATTTGCT 1320 TTTCAGCATG TGGTGCTTCC GATAGCTGCA GAGTTTGCTC CAGACATTAC CATTATATCT 1380 GCAGGATTTG ATGCAGCGAG GGGCGACCCT CTGGGTTGTT GTGATGTCAC TCCTGCTGGA 1440 TACTCTAGGA TGACGTCCAT GCTAACTGCT TGTTCACAGG GAAAGTTGTT GGTTATACTT 1500 GAGGGAGGAT ACAATCTTCG GTCTATATCC TCATCAGCTA CCGAAGTTGT TAAGGTCCTA 1560 CTTGGGGATA ATCCTATTTA TCATACAGGT GCAACTGAAC CGTCAGAGGA GGGCATACAG 1620 ACTGTCTTAC AAGTCCTGAG TATCCAGCAG CAATTTTGGC CAGTTTTAGT TCCATCCTTT 1680 GCATCAGTTC TGTCACTGCA GCGGTCGGTT TTTTCCAAAT ATACCAGTGA AGGAAACAAG 1740 AAAAGGAAGC ATGCAGGAGG AGCAGGGCCT TTCTGGTGGA AATGGGGAAG CAAAAGGCTT 1800 CTGTACGAAG TGCTATTTGA GGGCCGCTGT CTGCGAAAGA TCAAGGATAC ATGCAAAGAA 1860 AAATCGAATG ATGAAGCAGA GCCCTAAATG CGCTGCTGCT GCTGAGGCCT GACTGCTGAT 1920 CTTCTCAACA TCAATAGTGT AGTGGGCTGA CTGGGGTTCC CTGAAGCTGT GTAGCTTTGC 1980 ATATACCGGG CCAAATTTTG ACTGGAGAAT TAAAATGGTA GTTCGTGTTT TTAGGTGAAA 2040 TTTGTGAACT TGTTGACATG TATTGGGATG TTTACTTGTC CTAGCAATAG AGTTTAAGTT 2100 TACCATCCCA TAGTCTATCG AATAATGGTA GTTCGTGTTT TTAGGTGAAA TTTGTGAACT 2160 TGTTGACTTG TATTGGGATG TTTAGTTGTC CTAGCAATAG AGTTTAAGTT TACCATCCCA 2220 TAGTCTGTCG AATGATCCTG ATCCTGATAC TCATGTTCAT TTCATTGTTT CATTTTTGTT 2280 GTCTCGTGGA CCGTGGTAAT TTAGATGTTA ACCTAGCATA TATTAGCAAA C
2332Nucleotide Fasta Sequence
>OB07G13070.1|Class-I|Oryza brachyantha ATTGCACTGCATGCTCTGATGACATCTGATATGAGACCACTCAACAGCCAAAAGGGTCAGACCTGTGGAGTTTCTGACCAAGCTTGCCACAGCAAAAGCAAAAACGACAATGATGGAAAACCATCACGTGCTAAAGTGAATGGAGTTTCCTCGTTGAGCGGGAGCCATAATGATGAGAAATTTTTGAAAGAGAACTCTGGAGCATGCAATTTAAATTCTGACCATGCCAATTCTTTATCAGTAGATGGGGTCAGAGTTTCTATAGCAAGGTCAGAACTAATTGACAATTCAGATCATGATGGTTGTCTGCATGTCAAGAATGAAAGCTGTATGGCTTGTGATGATCTGCTTCAAGAGTCTGACGGAGAACAACATGGGGGTACACTGGAGGATCTATTTTCCTTTAATGACGAGGAGGATGATGACAGTGATTGGGAACCCTCTGCTCGCCTTGCTTTGGACAGGTGGTTTTGCTTGAACTGTACAGTGCCAAATATGGAAGATTTTGCACATTGCCAGAATTGCAATGAGCTTAAAGGATCTGCAGTAGTTGGATATGATGCTTTCAAAGCTCATCTTGCACAGGCAGCTTTTTTATCTTCTGACACAGCACTGCCATCGGTATCCACAGCTGTCGGTTTTGATGAAAGAATGCTGCTCCATAGTGAGATAGAGATTAAACCAAATCCACATCCAGAAAGGCCTGACCGCCTTCGTGCAATTGCTGCTAGTCTTGCTGCCGCAGGTATCTTTCCCTCTAAATGTGTTATGGTACCTCCTCGAGAAATCACGAAGGAAGAACTCCTAACAGCCCATACTTCAGATCACATTGACAGTGTTGAGCAGACAAAAAACATGCTTTACAGTTACTTCACTTCGGATACATATGCAAATGGACACTCAGCATGTGCTGCCAAACTTGCAGCAGGGATATGTGCTGATCTTGCTAGCTTGATAGTTTCTGGGCATGCTCGTAATGGATTTGCAATGGTGAGGCCTCCTGGGCATCATGCTGGGGTGAAGCAAGCCATGGGATTTTGTCTTCACAACAATGCAGCAGTGGCTGCATTAGCTGCACAAAGAGCTGGTGCCAAGAAAGTATTAATAGTTGACTGGGATGTGCACCATGGTAATGGAACACAGGAGATATTTGATGGGGACAATTCTGTCTTGTACATATCACTACATCGTCATGAGGATGGAAGTTTCTACCCTGGAACTGGGGCAGCACATGAGGTTGGAGTTATGGATGGCCAAGGATTCTCGGTCAATATACCTTGGAGCCGTGGTGGTGTTGGAGACAATGACTACATATTTGCTTTTCAGCATGTGGTGCTTCCGATAGCTGCAGAGTTTGCTCCAGACATTACCATTATATCTGCAGGATTTGATGCAGCGAGGGGCGACCCTCTGGGTTGTTGTGATGTCACTCCTGCTGGATACTCTAGGATGACGTCCATGCTAACTGCTTGTTCACAGGGAAAGTTGTTGGTTATACTTGAGGGAGGATACAATCTTCGGTCTATATCCTCATCAGCTACCGAAGTTGTTAAGGTCCTACTTGGGGATAATCCTATTTATCATACAGGTGCAACTGAACCGTCAGAGGAGGGCATACAGACTGTCTTACAAGTCCTGAGTATCCAGCAGCAATTTTGGCCAGTTTTAGTTCCATCCTTTGCATCAGTTCTGTCACTGCAGCGGTCGGTTTTTTCCAAATATACCAGTGAAGGAAACAAGAAAAGGAAGCATGCAGGAGGAGCAGGGCCTTTCTGGTGGAAATGGGGAAGCAAAAGGCTTCTGTACGAAGTGCTATTTGAGGGCCGCTGTCTGCGAAAGATCAAGGATACATGCAAAGAAAAATCGAATGATGAAGCAGAGCCCTAAATGCGCTGCTGCTGCTGAGGCCTGACTGCTGATCTTCTCAACATCAATAGTGTAGTGGGCTGACTGGGGTTCCCTGAAGCTGTGTAGCTTTGCATATACCGGGCCAAATTTTGACTGGAGAATTAAAATGGTAGTTCGTGTTTTTAGGTGAAATTTGTGAACTTGTTGACATGTATTGGGATGTTTACTTGTCCTAGCAATAGAGTTTAAGTTTACCATCCCATAGTCTATCGAATAATGGTAGTTCGTGTTTTTAGGTGAAATTTGTGAACTTGTTGACTTGTATTGGGATGTTTAGTTGTCCTAGCAATAGAGTTTAAGTTTACCATCCCATAGTCTGTCGAATGATCCTGATCCTGATACTCATGTTCATTTCATTGTTTCATTTTTGTTGTCTCGTGGACCGTGGTAATTTAGATGTTAACCTAGCATATATTAGCAAAC
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |