Tag |
Content |
WERAM ID |
WERAM-Orb-0071 |
Ensembl Protein ID |
OBART07G04070.1 |
Gene Name |
|
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
1.30e-113 |
380.5 |
325 |
637 |
HDAC |
Class-I |
4.70e-37 |
129.2 |
345 |
630 |
|
Organism |
Oryza barthii |
Domain Profile |
HDAC Class-II
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeaglle.kleelkarkatkeelqlvHseehvelletaeklekeelesltvdsdsiyl 94 +++ +de+ml h+ +e + + hpE+p+R++ai +l++ag+ + k++ + r+ tkeel+ vH+++h++ +e+++++ + + ++y+ OBART07G04070.1 325 TAVGFDERMLLHSEIEIKPNPHPERPDRLRAIAASLASAGIFPsKCVMVPPREITKEELLRVHTSDHIDSVEQTKNMLYSYFT------SDTYA 412 6799***********************************999758*****************************665555444......478** PP class-2.txt 95 esksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkilivDwDvHhGnGtqeifykdpkv 188 + +s+ aa+la+G + +l++ +++g+++ngfa+vRPPGHHa ++amGFCl+nn+avaa +q+ +kk+livDwDvHhGnGtqeif d++v OBART07G04070.1 413 NGHSACAAKLAAGICADLANLIVSGRVRNGFAMVRPPGHHAGVKQAMGFCLHNNAAVAALAAQRAG-AKKVLIVDWDVHHGNGTQEIFDGDNSV 505 **********************************************************98777665.5************************** PP class-2.txt 189 lylSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgglsvtakcya 282 ly+SlHR+++gsf+p g+ga++evg +g+gf+vN++w+ g++gd++y++af++vvlpia eF+Pd+ ++saGfDaa+gdplg ++vt+++y+ OBART07G04070.1 506 LYISLHRHEDGSFYP--GTGAAHEVGVMDGQGFSVNIPWSRGGVGDNDYIFAFKHVVLPIAAEFAPDITIISAGFDAARGDPLGCCDVTPAGYS 597 ***************..***************************************************************************** PP class-2.txt 283 tltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322 +++ +l+ ++g+++++lEGGynl++i++++++vvk+Llg OBART07G04070.1 598 RMASMLTACSQGKLLVILEGGYNLRSISSSATEVVKVLLG 637 **************************************96 PP
HDAC Class-I
class-1.txt 19 khpmkpkrlslth.eLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycqlitGasle 111 hp +p rl+ + +L+ + k +v p++ ++eell++h+ ++i+ +++ ++ + ++ + ++ g+ + + +G + OBART07G04070.1 345 PHPERPDRLRAIAaSLASAGIFPSKCVMVPPREITKEELLRVHTSDHIDSVEQTKNMLYSYFT--SDTYANGHSACAAKLA-------AGICAD 429 588999999876515666666678888899999999999999999999998887776666666..5567777766555444.......444444 PP class-1.txt 112 aakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellk.khkrvlyididlhhGDgveeafyttdrvmtvsfhkygee.ffPgt 201 a+ + +++ a+ G hha ++a Gfc n+ +a l ++ k+vl +d d+hhG+g +e f + v+ +s+h+++++ f+Pgt OBART07G04070.1 430 LANLIVSGRVRngFAMVRPPG-HHAGVKQAMGFCLHNNAAVAALAAQRaGAKKVLIVDWDVHHGNGTQEIFDGDNSVLYISLHRHEDGsFYPGT 522 444444443330044444444.999999**********99999999886799*********************************985499*** PP class-1.txt 202 GdlsdvgaekgkyyavnvPl.kdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksf.nlpllvlGG 293 G ++vg+ +g+ ++vn+P + g+ D+ y fk+v+ ++ f P++ ++ G D+ gD+lg+ +++ g++++ +++ + +llv+ OBART07G04070.1 523 GAAHEVGVMDGQGFSVNIPWsRGGVGDNDYIFAFKHVVLPIAAEFAPDITIISAGFDAARGDPLGCCDVTPAGYSRMASMLTACsQGKLLVILE 616 *******************83568*******************************************************999987889****** PP class-1.txt 294 GGYtlrnvaRcwty 307 GGY+lr ++ t OBART07G04070.1 617 GGYNLRSISSSATE 630 ******99976665 PP
|
Protein Sequence (Fasta) | MASRTAQTSF GFRAITLLDL HETNHYYYVE FPSPRFPCDD LFRARDNSPP PWLGFDPRAA 60 RAGTTRDGAS RDGPTRAEHE AHEPLFTVIP WPRRAPPKIQ SREASAAAAA GIALQIALHA 120 LMASDMRSLN SQKGQSCGVS DQACHSKSKS GNDGKPSHAK ANGVSSLSGS HNDEKILKEN 180 SGACNLNSDH ANPLSVDGTK VSTARSELID SSGHDGCLHV KNESCMACDD LLQESDKEQP 240 GGTLEDLFSF NDEEDDDSDW EPSARLALSR WFCLNCTVPN MEGFTHCQNC DELKGSVVVG 300 YDAFKAHLAQ AALLSADAAL PSVSTAVGFD ERMLLHSEIE IKPNPHPERP DRLRAIAASL 360 ASAGIFPSKC VMVPPREITK EELLRVHTSD HIDSVEQTKN MLYSYFTSDT YANGHSACAA 420 KLAAGICADL ANLIVSGRVR NGFAMVRPPG HHAGVKQAMG FCLHNNAAVA ALAAQRAGAK 480 KVLIVDWDVH HGNGTQEIFD GDNSVLYISL HRHEDGSFYP GTGAAHEVGV MDGQGFSVNI 540 PWSRGGVGDN DYIFAFKHVV LPIAAEFAPD ITIISAGFDA ARGDPLGCCD VTPAGYSRMA 600 SMLTACSQGK LLVILEGGYN LRSISSSATE VVKVLLGDSP VYDTDATEPS EEGIQTVLQV 660 LSIQQQFWPV LVPSFASVLA LQRSVFSRYT TEVNKMKRKH AGGAGPFWWK WGSKRLLYEV 720 LFEGRCLRKT KDTGKEKLND EAEP 744Protein Fasta Sequence
>OBART07G04070.1|Class-I|Oryza barthii MASRTAQTSFGFRAITLLDLHETNHYYYVEFPSPRFPCDDLFRARDNSPPPWLGFDPRAARAGTTRDGASRDGPTRAEHEAHEPLFTVIPWPRRAPPKIQSREASAAAAAGIALQIALHALMASDMRSLNSQKGQSCGVSDQACHSKSKSGNDGKPSHAKANGVSSLSGSHNDEKILKENSGACNLNSDHANPLSVDGTKVSTARSELIDSSGHDGCLHVKNESCMACDDLLQESDKEQPGGTLEDLFSFNDEEDDDSDWEPSARLALSRWFCLNCTVPNMEGFTHCQNCDELKGSVVVGYDAFKAHLAQAALLSADAALPSVSTAVGFDERMLLHSEIEIKPNPHPERPDRLRAIAASLASAGIFPSKCVMVPPREITKEELLRVHTSDHIDSVEQTKNMLYSYFTSDTYANGHSACAAKLAAGICADLANLIVSGRVRNGFAMVRPPGHHAGVKQAMGFCLHNNAAVAALAAQRAGAKKVLIVDWDVHHGNGTQEIFDGDNSVLYISLHRHEDGSFYPGTGAAHEVGVMDGQGFSVNIPWSRGGVGDNDYIFAFKHVVLPIAAEFAPDITIISAGFDAARGDPLGCCDVTPAGYSRMASMLTACSQGKLLVILEGGYNLRSISSSATEVVKVLLGDSPVYDTDATEPSEEGIQTVLQVLSIQQQFWPVLVPSFASVLALQRSVFSRYTTEVNKMKRKHAGGAGPFWWKWGSKRLLYEVLFEGRCLRKTKDTGKEKLNDEAEP
|
Nucleotide Sequence (Fasta) | ATGGCGAGCC GCACGGCCCA GACGTCCTTC GGCTTCCGCG CCATCACCCT GCTCGACCTT 60 CATGAAACAA ATCACTACTA CTACGTTGAA TTTCCGTCAC CACGATTTCC TTGTGACGAC 120 CTTTTCCGCG CCCGCGACAA CTCGCCGCCG CCATGGCTAG GTTTCGACCC CCGAGCCGCC 180 CGAGCAGGGA CGACGCGGGA CGGGGCAAGT AGAGACGGAC CCACTCGAGC CGAGCACGAA 240 GCGCACGAGC CGCTCTTCAC AGTCATCCCG TGGCCGCGCC GCGCCCCTCC AAAAATCCAA 300 TCGCGAGAGG CGAGCGCCGC CGCCGCCGCC GGGATCGCCC TCCAGATTGC GTTGCATGCT 360 CTGATGGCGT CTGATATGAG GTCACTCAAC AGCCAAAAGG GACAGAGTTG TGGAGTTTCA 420 GACCAAGCTT GCCACAGCAA AAGCAAAAGC GGCAATGATG GAAAACCATC ACATGCTAAA 480 GCAAATGGAG TTTCCTCGTT GAGCGGGAGT CATAATGATG AGAAAATTTT GAAAGAGAAC 540 TCTGGAGCAT GCAATTTAAA TTCCGACCAT GCCAATCCTT TATCAGTAGA TGGGACCAAA 600 GTTTCTACAG CAAGGTCGGA ACTTATTGAC AGTTCAGGTC ATGATGGTTG TCTGCATGTC 660 AAGAATGAAA GCTGTATGGC TTGTGATGAT CTGCTTCAAG AGTCTGACAA AGAACAGCCT 720 GGGGGTACAC TGGAGGATCT ATTTTCCTTT AATGATGAAG AGGATGATGA CAGTGACTGG 780 GAACCCTCTG CTCGCCTTGC TTTGAGCAGG TGGTTTTGCT TGAACTGTAC AGTGCCAAAC 840 ATGGAGGGGT TTACACATTG TCAGAATTGC GATGAGCTTA AGGGATCTGT GGTAGTTGGA 900 TATGATGCTT TCAAAGCTCA TCTTGCACAG GCAGCTTTGT TATCTGCTGA CGCAGCGCTG 960 CCATCAGTAT CTACAGCTGT CGGTTTTGAT GAAAGAATGT TGCTCCATAG TGAGATAGAG 1020 ATTAAACCAA ATCCACATCC AGAAAGGCCT GACCGCCTTC GTGCAATTGC TGCCAGTCTT 1080 GCTTCTGCAG GTATCTTCCC TTCAAAATGT GTCATGGTAC CTCCTCGAGA AATCACTAAG 1140 GAAGAACTCC TAAGGGTCCA TACTTCAGAT CACATTGACA GTGTTGAGCA GACAAAGAAC 1200 ATGCTTTACA GTTACTTCAC TTCAGATACC TATGCAAATG GACACTCAGC ATGTGCTGCC 1260 AAACTTGCAG CAGGGATATG TGCTGATCTT GCTAACTTGA TAGTATCTGG GCGTGTTCGC 1320 AATGGATTTG CAATGGTGAG ACCTCCTGGC CATCATGCAG GGGTGAAACA AGCCATGGGT 1380 TTTTGTCTTC ACAATAACGC AGCAGTGGCT GCATTAGCTG CACAAAGAGC TGGTGCCAAG 1440 AAAGTCTTAA TAGTTGACTG GGATGTCCAC CATGGCAATG GAACACAGGA GATATTTGAT 1500 GGGGACAATT CTGTCTTGTA CATATCATTA CATCGGCATG AGGATGGAAG CTTCTACCCT 1560 GGAACTGGGG CAGCACATGA GGTGGGAGTT ATGGATGGCC AAGGATTCTC AGTCAATATA 1620 CCTTGGAGCC GTGGTGGTGT TGGAGACAAT GACTACATAT TTGCTTTTAA GCATGTGGTG 1680 CTTCCGATAG CTGCAGAATT TGCTCCAGAC ATCACCATCA TATCTGCAGG ATTTGATGCA 1740 GCGAGGGGTG ACCCTCTGGG TTGTTGTGAT GTCACTCCTG CTGGATATTC TAGGATGGCG 1800 TCCATGCTAA CTGCTTGTTC ACAGGGAAAA TTGTTGGTTA TACTTGAGGG AGGATACAAT 1860 CTTCGGTCTA TATCCTCATC AGCTACTGAA GTTGTTAAGG TCCTACTTGG GGATAGTCCT 1920 GTTTATGATA CAGATGCAAC TGAACCATCA GAGGAGGGCA TACAGACTGT CTTACAAGTC 1980 CTGAGTATCC AGCAGCAATT TTGGCCAGTT TTAGTCCCAT CCTTTGCATC AGTTCTGGCA 2040 CTGCAGCGGT CGGTTTTTTC CAGATATACC ACTGAAGTAA ACAAGATGAA AAGGAAGCAT 2100 GCAGGAGGGG CAGGACCCTT CTGGTGGAAA TGGGGGAGTA AAAGGCTACT GTACGAAGTG 2160 CTATTTGAGG GCCGCTGTCT GAGGAAAACC AAGGATACAG GCAAAGAAAA ATTGAATGAT 2220 GAAGCAGAGC CCTAAAT
2238Nucleotide Fasta Sequence
>OBART07G04070.1|Class-I|Oryza barthii ATGGCGAGCCGCACGGCCCAGACGTCCTTCGGCTTCCGCGCCATCACCCTGCTCGACCTTCATGAAACAAATCACTACTACTACGTTGAATTTCCGTCACCACGATTTCCTTGTGACGACCTTTTCCGCGCCCGCGACAACTCGCCGCCGCCATGGCTAGGTTTCGACCCCCGAGCCGCCCGAGCAGGGACGACGCGGGACGGGGCAAGTAGAGACGGACCCACTCGAGCCGAGCACGAAGCGCACGAGCCGCTCTTCACAGTCATCCCGTGGCCGCGCCGCGCCCCTCCAAAAATCCAATCGCGAGAGGCGAGCGCCGCCGCCGCCGCCGGGATCGCCCTCCAGATTGCGTTGCATGCTCTGATGGCGTCTGATATGAGGTCACTCAACAGCCAAAAGGGACAGAGTTGTGGAGTTTCAGACCAAGCTTGCCACAGCAAAAGCAAAAGCGGCAATGATGGAAAACCATCACATGCTAAAGCAAATGGAGTTTCCTCGTTGAGCGGGAGTCATAATGATGAGAAAATTTTGAAAGAGAACTCTGGAGCATGCAATTTAAATTCCGACCATGCCAATCCTTTATCAGTAGATGGGACCAAAGTTTCTACAGCAAGGTCGGAACTTATTGACAGTTCAGGTCATGATGGTTGTCTGCATGTCAAGAATGAAAGCTGTATGGCTTGTGATGATCTGCTTCAAGAGTCTGACAAAGAACAGCCTGGGGGTACACTGGAGGATCTATTTTCCTTTAATGATGAAGAGGATGATGACAGTGACTGGGAACCCTCTGCTCGCCTTGCTTTGAGCAGGTGGTTTTGCTTGAACTGTACAGTGCCAAACATGGAGGGGTTTACACATTGTCAGAATTGCGATGAGCTTAAGGGATCTGTGGTAGTTGGATATGATGCTTTCAAAGCTCATCTTGCACAGGCAGCTTTGTTATCTGCTGACGCAGCGCTGCCATCAGTATCTACAGCTGTCGGTTTTGATGAAAGAATGTTGCTCCATAGTGAGATAGAGATTAAACCAAATCCACATCCAGAAAGGCCTGACCGCCTTCGTGCAATTGCTGCCAGTCTTGCTTCTGCAGGTATCTTCCCTTCAAAATGTGTCATGGTACCTCCTCGAGAAATCACTAAGGAAGAACTCCTAAGGGTCCATACTTCAGATCACATTGACAGTGTTGAGCAGACAAAGAACATGCTTTACAGTTACTTCACTTCAGATACCTATGCAAATGGACACTCAGCATGTGCTGCCAAACTTGCAGCAGGGATATGTGCTGATCTTGCTAACTTGATAGTATCTGGGCGTGTTCGCAATGGATTTGCAATGGTGAGACCTCCTGGCCATCATGCAGGGGTGAAACAAGCCATGGGTTTTTGTCTTCACAATAACGCAGCAGTGGCTGCATTAGCTGCACAAAGAGCTGGTGCCAAGAAAGTCTTAATAGTTGACTGGGATGTCCACCATGGCAATGGAACACAGGAGATATTTGATGGGGACAATTCTGTCTTGTACATATCATTACATCGGCATGAGGATGGAAGCTTCTACCCTGGAACTGGGGCAGCACATGAGGTGGGAGTTATGGATGGCCAAGGATTCTCAGTCAATATACCTTGGAGCCGTGGTGGTGTTGGAGACAATGACTACATATTTGCTTTTAAGCATGTGGTGCTTCCGATAGCTGCAGAATTTGCTCCAGACATCACCATCATATCTGCAGGATTTGATGCAGCGAGGGGTGACCCTCTGGGTTGTTGTGATGTCACTCCTGCTGGATATTCTAGGATGGCGTCCATGCTAACTGCTTGTTCACAGGGAAAATTGTTGGTTATACTTGAGGGAGGATACAATCTTCGGTCTATATCCTCATCAGCTACTGAAGTTGTTAAGGTCCTACTTGGGGATAGTCCTGTTTATGATACAGATGCAACTGAACCATCAGAGGAGGGCATACAGACTGTCTTACAAGTCCTGAGTATCCAGCAGCAATTTTGGCCAGTTTTAGTCCCATCCTTTGCATCAGTTCTGGCACTGCAGCGGTCGGTTTTTTCCAGATATACCACTGAAGTAAACAAGATGAAAAGGAAGCATGCAGGAGGGGCAGGACCCTTCTGGTGGAAATGGGGGAGTAAAAGGCTACTGTACGAAGTGCTATTTGAGGGCCGCTGTCTGAGGAAAACCAAGGATACAGGCAAAGAAAAATTGAATGATGAAGCAGAGCCCTAAAT
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |