Tag |
Content |
WERAM ID |
WERAM-Org-0071 |
Ensembl Protein ID |
ORGLA07G0034700.1 |
Gene Name |
|
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
7.00e-114 |
381 |
204 |
516 |
HDAC |
Class-I |
2.30e-37 |
129.9 |
224 |
509 |
|
Organism |
Oryza glaberrima |
Domain Profile |
HDAC Class-II
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeaglle.kleelkarkatkeelqlvHseehvelletaeklekeelesltvdsdsi 92 +++ +de+ml h+ +e + + hpE+p+R++ai +l++ag+ + k++ + r+ tkeel+ vH+++h++ +e+++++ + + ++ ORGLA07G0034700.1 204 TAVGFDERMLLHSEIEIKPNPHPERPDRLRAIAASLASAGIFPsKCVMVPPREITKEELLRVHTSDHIDSVEQTKNMLYSYFT------SDT 289 6799***********************************999758*****************************665555444......478 PP class-2.txt 93 ylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkilivDwDvHhGnGtqeifyk 184 y++ +s+ aa+la+G + +l++ +++g+++ngfa+vRPPGHHa ++amGFCl+nn+avaa +q+ +kk+livDwDvHhGnGtqeif ORGLA07G0034700.1 290 YANGHSACAAKLAAGICADLANLIVSGRVRNGFAMVRPPGHHAGVKQAMGFCLHNNAAVAALAAQRAG-AKKVLIVDWDVHHGNGTQEIFDG 380 ************************************************************98777665.5********************** PP class-2.txt 185 dpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgglsv 276 d++vly+SlHR+++gsf+p g+ga++evg +g+gf+vN++w+ g++gd++y++af++vvlpia eF+Pd+ ++saGfDaa+gdplg ++v ORGLA07G0034700.1 381 DNSVLYISLHRHEDGSFYP--GTGAAHEVGVMDGQGFSVNIPWSRGGVGDNDYIFAFKHVVLPIAAEFAPDITIISAGFDAARGDPLGCCDV 470 *******************..*********************************************************************** PP class-2.txt 277 takcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322 t+++y++++ +l+ ++g+++++lEGGynl++i++++++vvk+Llg ORGLA07G0034700.1 471 TPAGYSRMASMLTACSQGKLLVILEGGYNLRSISSSATEVVKVLLG 516 ********************************************96 PP
HDAC Class-I
class-1.txt 19 khpmkpkrlslth.eLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycqlitGas 109 hp +p rl+ + +L+ + k +v p++ ++eell++h+ ++i+ +++ ++ + ++ + ++ g+ + + +G ORGLA07G0034700.1 224 PHPERPDRLRAIAaSLASAGIFPSKCVMVPPREITKEELLRVHTSDHIDSVEQTKNMLYSYFT--SDTYANGHSACAAKLA-------AGIC 306 58899999987651566666667888889999999999*****99999998887776666666..5567777766555444.......4444 PP class-1.txt 110 leaakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellk.khkrvlyididlhhGDgveeafyttdrvmtvsfhkygee.f 197 + a+ + +++ a+ G hha ++a Gfc n+ +a l ++ k+vl +d d+hhG+g +e f + v+ +s+h+++++ f ORGLA07G0034700.1 307 ADLANLIVSGRVRngFAMVRPPG-HHAGVKQAMGFCLHNNAAVAALAAQRaGAKKVLIVDWDVHHGNGTQEIFDGDNSVLYISLHRHEDGsF 397 44444444443330044444444.999999**********99999999886799*********************************98549 PP class-1.txt 198 fPgtGdlsdvgaekgkyyavnvPl.kdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksf.nlp 287 +PgtG ++vg+ +g+ ++vn+P + g+ D+ y fk+v+ ++ f P++ ++ G D+ gD+lg+ +++ g++++ +++ + + ORGLA07G0034700.1 398 YPGTGAAHEVGVMDGQGFSVNIPWsRGGVGDNDYIFAFKHVVLPIAAEFAPDITIISAGFDAARGDPLGCCDVTPAGYSRMASMLTACsQGK 489 9**********************83568*******************************************************999987889 PP class-1.txt 288 llvlGGGGYtlrnvaRcwty 307 llv+ GGY+lr ++ t ORGLA07G0034700.1 490 LLVILEGGYNLRSISSSATE 509 ************99976665 PP
|
Protein Sequence (Fasta) | MASDMRSLNS QKGQSCGVSD QACHSKSKSG NDGKPSHAKA NGVSSLSGSH NDEKILKENS 60 GACNLNSDHA NPLSVDGTKV STARSELIDS SGHDGCLHVK NESCMACDDL LQESDKEQPG 120 GTLEDLFSFN DEEDDDSDWE PSARLALSRW FCLNCTVPNM EGFTHCQNCD ELKGSVVVGY 180 DAFKAHLAQA ALLSADAALP SVSTAVGFDE RMLLHSEIEI KPNPHPERPD RLRAIAASLA 240 SAGIFPSKCV MVPPREITKE ELLRVHTSDH IDSVEQTKNM LYSYFTSDTY ANGHSACAAK 300 LAAGICADLA NLIVSGRVRN GFAMVRPPGH HAGVKQAMGF CLHNNAAVAA LAAQRAGAKK 360 VLIVDWDVHH GNGTQEIFDG DNSVLYISLH RHEDGSFYPG TGAAHEVGVM DGQGFSVNIP 420 WSRGGVGDND YIFAFKHVVL PIAAEFAPDI TIISAGFDAA RGDPLGCCDV TPAGYSRMAS 480 MLTACSQGKL LVILEGGYNL RSISSSATEV VKVLLGDSPV YDTDATEPSE EGIQTVLQVL 540 SIQQQFWPVL VPSFASVLAL QRSVFSRYTT EVNKMKRKHA GGAGPFWWKW GSKRLLYEVL 600 FEGRCLRKTK DTGKEKLNDE AEP 623Protein Fasta Sequence
>ORGLA07G0034700.1|Class-I|Oryza glaberrima MASDMRSLNSQKGQSCGVSDQACHSKSKSGNDGKPSHAKANGVSSLSGSHNDEKILKENSGACNLNSDHANPLSVDGTKVSTARSELIDSSGHDGCLHVKNESCMACDDLLQESDKEQPGGTLEDLFSFNDEEDDDSDWEPSARLALSRWFCLNCTVPNMEGFTHCQNCDELKGSVVVGYDAFKAHLAQAALLSADAALPSVSTAVGFDERMLLHSEIEIKPNPHPERPDRLRAIAASLASAGIFPSKCVMVPPREITKEELLRVHTSDHIDSVEQTKNMLYSYFTSDTYANGHSACAAKLAAGICADLANLIVSGRVRNGFAMVRPPGHHAGVKQAMGFCLHNNAAVAALAAQRAGAKKVLIVDWDVHHGNGTQEIFDGDNSVLYISLHRHEDGSFYPGTGAAHEVGVMDGQGFSVNIPWSRGGVGDNDYIFAFKHVVLPIAAEFAPDITIISAGFDAARGDPLGCCDVTPAGYSRMASMLTACSQGKLLVILEGGYNLRSISSSATEVVKVLLGDSPVYDTDATEPSEEGIQTVLQVLSIQQQFWPVLVPSFASVLALQRSVFSRYTTEVNKMKRKHAGGAGPFWWKWGSKRLLYEVLFEGRCLRKTKDTGKEKLNDEAEP
|
Nucleotide Sequence (Fasta) | ATGGCGTCTG ATATGAGGTC ACTCAACAGC CAAAAGGGAC AGAGTTGTGG AGTTTCAGAC 60 CAAGCTTGCC ACAGCAAAAG CAAAAGCGGC AATGATGGAA AACCATCACA TGCTAAAGCA 120 AATGGAGTTT CCTCGTTGAG CGGGAGTCAT AATGATGAGA AAATTTTGAA AGAGAACTCT 180 GGAGCATGCA ATTTAAATTC CGACCATGCC AATCCTTTAT CAGTAGATGG GACCAAAGTT 240 TCTACAGCAA GGTCGGAACT TATTGACAGT TCAGGTCATG ATGGTTGTCT GCATGTCAAG 300 AATGAAAGCT GTATGGCTTG TGATGATCTG CTTCAAGAGT CTGACAAAGA ACAGCCTGGG 360 GGTACACTGG AGGATCTATT TTCCTTTAAT GATGAAGAGG ATGATGACAG TGACTGGGAA 420 CCCTCTGCTC GCCTTGCTTT GAGCAGGTGG TTTTGCTTGA ACTGTACAGT GCCAAACATG 480 GAGGGGTTTA CACATTGTCA GAATTGCGAT GAGCTTAAGG GATCTGTGGT AGTTGGATAT 540 GATGCTTTCA AAGCTCATCT TGCACAGGCA GCTTTGTTAT CTGCTGACGC AGCGCTGCCA 600 TCAGTATCTA CAGCTGTCGG TTTTGATGAA AGAATGTTGC TCCATAGTGA GATAGAGATT 660 AAACCAAATC CACATCCAGA AAGGCCTGAC CGCCTTCGTG CAATTGCTGC CAGTCTTGCT 720 TCTGCAGGTA TCTTCCCTTC AAAATGTGTC ATGGTACCTC CTCGAGAAAT CACTAAGGAA 780 GAACTCCTAA GGGTCCATAC TTCAGATCAC ATTGACAGTG TTGAGCAGAC AAAGAACATG 840 CTTTACAGTT ACTTCACTTC AGATACCTAT GCAAATGGAC ACTCAGCATG TGCTGCCAAA 900 CTTGCAGCAG GGATATGTGC TGATCTTGCT AACTTGATAG TATCTGGGCG TGTTCGCAAT 960 GGATTTGCAA TGGTGAGACC TCCTGGCCAT CATGCAGGGG TGAAACAAGC CATGGGTTTT 1020 TGTCTTCACA ATAACGCAGC AGTGGCTGCA TTAGCTGCAC AAAGAGCTGG TGCCAAGAAA 1080 GTCTTAATAG TTGACTGGGA TGTCCACCAT GGCAATGGAA CACAGGAGAT ATTTGATGGG 1140 GACAATTCTG TCTTGTACAT ATCATTACAT CGGCATGAGG ATGGAAGCTT CTACCCTGGA 1200 ACTGGGGCAG CACATGAGGT GGGAGTTATG GATGGCCAAG GATTCTCAGT CAATATACCT 1260 TGGAGCCGTG GTGGTGTTGG AGACAATGAC TACATATTTG CTTTTAAGCA TGTGGTGCTT 1320 CCGATAGCTG CAGAATTTGC TCCAGACATC ACCATCATAT CTGCAGGATT TGATGCAGCG 1380 AGGGGTGACC CTCTGGGTTG TTGTGATGTC ACTCCTGCTG GATATTCTAG GATGGCGTCC 1440 ATGCTAACTG CTTGTTCACA GGGAAAATTG TTGGTTATAC TTGAGGGAGG ATACAATCTT 1500 CGGTCTATAT CCTCATCAGC TACTGAAGTT GTTAAGGTCC TACTTGGGGA TAGTCCTGTT 1560 TATGATACAG ATGCAACTGA ACCATCAGAG GAGGGCATAC AGACTGTCTT ACAAGTCCTG 1620 AGTATCCAGC AGCAATTTTG GCCAGTTTTA GTCCCATCCT TTGCATCAGT TCTGGCACTG 1680 CAGCGGTCGG TTTTTTCCAG ATATACCACT GAAGTAAACA AGATGAAAAG GAAGCATGCA 1740 GGAGGGGCAG GACCCTTCTG GTGGAAATGG GGGAGTAAAA GGCTACTGTA CGAAGTGCTA 1800 TTTGAGGGCC GCTGTCTGAG GAAAACCAAG GATACAGGCA AAGAAAAATT GAATGATGAA 1860 GCAGAGCCCT AA
1873Nucleotide Fasta Sequence
>ORGLA07G0034700.1|Class-I|Oryza glaberrima ATGGCGTCTGATATGAGGTCACTCAACAGCCAAAAGGGACAGAGTTGTGGAGTTTCAGACCAAGCTTGCCACAGCAAAAGCAAAAGCGGCAATGATGGAAAACCATCACATGCTAAAGCAAATGGAGTTTCCTCGTTGAGCGGGAGTCATAATGATGAGAAAATTTTGAAAGAGAACTCTGGAGCATGCAATTTAAATTCCGACCATGCCAATCCTTTATCAGTAGATGGGACCAAAGTTTCTACAGCAAGGTCGGAACTTATTGACAGTTCAGGTCATGATGGTTGTCTGCATGTCAAGAATGAAAGCTGTATGGCTTGTGATGATCTGCTTCAAGAGTCTGACAAAGAACAGCCTGGGGGTACACTGGAGGATCTATTTTCCTTTAATGATGAAGAGGATGATGACAGTGACTGGGAACCCTCTGCTCGCCTTGCTTTGAGCAGGTGGTTTTGCTTGAACTGTACAGTGCCAAACATGGAGGGGTTTACACATTGTCAGAATTGCGATGAGCTTAAGGGATCTGTGGTAGTTGGATATGATGCTTTCAAAGCTCATCTTGCACAGGCAGCTTTGTTATCTGCTGACGCAGCGCTGCCATCAGTATCTACAGCTGTCGGTTTTGATGAAAGAATGTTGCTCCATAGTGAGATAGAGATTAAACCAAATCCACATCCAGAAAGGCCTGACCGCCTTCGTGCAATTGCTGCCAGTCTTGCTTCTGCAGGTATCTTCCCTTCAAAATGTGTCATGGTACCTCCTCGAGAAATCACTAAGGAAGAACTCCTAAGGGTCCATACTTCAGATCACATTGACAGTGTTGAGCAGACAAAGAACATGCTTTACAGTTACTTCACTTCAGATACCTATGCAAATGGACACTCAGCATGTGCTGCCAAACTTGCAGCAGGGATATGTGCTGATCTTGCTAACTTGATAGTATCTGGGCGTGTTCGCAATGGATTTGCAATGGTGAGACCTCCTGGCCATCATGCAGGGGTGAAACAAGCCATGGGTTTTTGTCTTCACAATAACGCAGCAGTGGCTGCATTAGCTGCACAAAGAGCTGGTGCCAAGAAAGTCTTAATAGTTGACTGGGATGTCCACCATGGCAATGGAACACAGGAGATATTTGATGGGGACAATTCTGTCTTGTACATATCATTACATCGGCATGAGGATGGAAGCTTCTACCCTGGAACTGGGGCAGCACATGAGGTGGGAGTTATGGATGGCCAAGGATTCTCAGTCAATATACCTTGGAGCCGTGGTGGTGTTGGAGACAATGACTACATATTTGCTTTTAAGCATGTGGTGCTTCCGATAGCTGCAGAATTTGCTCCAGACATCACCATCATATCTGCAGGATTTGATGCAGCGAGGGGTGACCCTCTGGGTTGTTGTGATGTCACTCCTGCTGGATATTCTAGGATGGCGTCCATGCTAACTGCTTGTTCACAGGGAAAATTGTTGGTTATACTTGAGGGAGGATACAATCTTCGGTCTATATCCTCATCAGCTACTGAAGTTGTTAAGGTCCTACTTGGGGATAGTCCTGTTTATGATACAGATGCAACTGAACCATCAGAGGAGGGCATACAGACTGTCTTACAAGTCCTGAGTATCCAGCAGCAATTTTGGCCAGTTTTAGTCCCATCCTTTGCATCAGTTCTGGCACTGCAGCGGTCGGTTTTTTCCAGATATACCACTGAAGTAAACAAGATGAAAAGGAAGCATGCAGGAGGGGCAGGACCCTTCTGGTGGAAATGGGGGAGTAAAAGGCTACTGTACGAAGTGCTATTTGAGGGCCGCTGTCTGAGGAAAACCAAGGATACAGGCAAAGAAAAATTGAATGATGAAGCAGAGCCCTAA
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |