Tag |
Content |
WERAM ID |
WERAM-Orr-0073 |
Ensembl Protein ID |
ORUFI07G03770.1 |
Gene Name |
|
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
7.40e-114 |
381.5 |
257 |
569 |
HDAC |
Class-I |
3.80e-37 |
129.8 |
277 |
562 |
|
Organism |
Oryza rufipogon |
Domain Profile |
HDAC Class-II
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeaglle.kleelkarkatkeelqlvHseehvelletaeklekeelesltvdsdsiyl 94 +++ +de+ml h+ +e + + hpE+p+R++ai +l++ag+ + k++ + r+ tkeel+ vH+++h++ +e+++++ + + ++y+ ORUFI07G03770.1 257 TAVGFDERMLLHSEIEIKPNPHPERPDRLRAIAASLAAAGIFPsKCVMVPPREITKEELLRVHTSDHIDSVEQTKNMLYSYFT------SDTYA 344 6799***********************************999758*****************************665555444......478** PP class-2.txt 95 esksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkilivDwDvHhGnGtqeifykdpkv 188 + +s+ aa+la+G + +l++ +++g+++ngfa+vRPPGHHa ++amGFCl+nn+avaa +q+ +kk+livDwDvHhGnGtqeif d++v ORUFI07G03770.1 345 NGHSACAAKLAAGICADLANLIVSGRVRNGFAMVRPPGHHAGVKQAMGFCLHNNAAVAALAAQRAG-AKKVLIVDWDVHHGNGTQEIFDGDNSV 437 **********************************************************98777665.5************************** PP class-2.txt 189 lylSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgglsvtakcya 282 ly+SlHR+++gsf+p g+ga++evg +g+gf+vN++w+ g++gd++y++af++vvlpia eF+Pd+ ++saGfDaa+gdplg ++vt+++y+ ORUFI07G03770.1 438 LYISLHRHEDGSFYP--GTGAANEVGVMDGQGFSVNIPWSRGGVGDNDYIFAFKHVVLPIAAEFAPDITIISAGFDAARGDPLGCCDVTPAGYS 529 ***************..***************************************************************************** PP class-2.txt 283 tltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322 +++ +l+ ++g+++++lEGGynl++i++++++vvk+Llg ORUFI07G03770.1 530 RMASMLTACSQGKLLVILEGGYNLRSISSSATEVVKVLLG 569 **************************************96 PP
HDAC Class-I
class-1.txt 19 khpmkpkrlslth.eLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycqlitGasle 111 hp +p rl+ + +L+ + k +v p++ ++eell++h+ ++i+ +++ ++ + ++ + ++ g+ + + +G + ORUFI07G03770.1 277 PHPERPDRLRAIAaSLAAAGIFPSKCVMVPPREITKEELLRVHTSDHIDSVEQTKNMLYSYFT--SDTYANGHSACAAKLA-------AGICAD 361 5899999998665166666667788889999999999*******9999999887776666666..5567777766555444.......444444 PP class-1.txt 112 aakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellk.khkrvlyididlhhGDgveeafyttdrvmtvsfhkygee.ffPgt 201 a+ + +++ a+ G hha ++a Gfc n+ +a l ++ k+vl +d d+hhG+g +e f + v+ +s+h+++++ f+Pgt ORUFI07G03770.1 362 LANLIVSGRVRngFAMVRPPG-HHAGVKQAMGFCLHNNAAVAALAAQRaGAKKVLIVDWDVHHGNGTQEIFDGDNSVLYISLHRHEDGsFYPGT 454 444444443330044444444.999999**********99999999886799*********************************985499*** PP class-1.txt 202 GdlsdvgaekgkyyavnvPl.kdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksf.nlpllvlGG 293 G ++vg+ +g+ ++vn+P + g+ D+ y fk+v+ ++ f P++ ++ G D+ gD+lg+ +++ g++++ +++ + +llv+ ORUFI07G03770.1 455 GAANEVGVMDGQGFSVNIPWsRGGVGDNDYIFAFKHVVLPIAAEFAPDITIISAGFDAARGDPLGCCDVTPAGYSRMASMLTACsQGKLLVILE 548 *******************83568*******************************************************999987889****** PP class-1.txt 294 GGYtlrnvaRcwty 307 GGY+lr ++ t ORUFI07G03770.1 549 GGYNLRSISSSATE 562 ******99976665 PP
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Protein Sequence (Fasta) | MAGKDGLTRA EHEAHEPLFT VIPWPRRAPP KIQSREASAA AAGIALQIAL HALMASDMRS 60 LNSQKGQSCG VSDQACHSKS KSGNDGKPSH AKANGVSSLS GSHNDEKILK ENSGACNLNS 120 DHANPLSVDG TKVSTARSEL IDSSGHDGCL HVKNESCMAC DDLLQESDKE QPGGTLEDLF 180 SFNDEEDDDS DWEPSARLAL SRWFCLNCTV PNMEGFTHCQ NCDELKGSVV VGYDAFKAHL 240 AQAALLSADA ALPSVSTAVG FDERMLLHSE IEIKPNPHPE RPDRLRAIAA SLAAAGIFPS 300 KCVMVPPREI TKEELLRVHT SDHIDSVEQT KNMLYSYFTS DTYANGHSAC AAKLAAGICA 360 DLANLIVSGR VRNGFAMVRP PGHHAGVKQA MGFCLHNNAA VAALAAQRAG AKKVLIVDWD 420 VHHGNGTQEI FDGDNSVLYI SLHRHEDGSF YPGTGAANEV GVMDGQGFSV NIPWSRGGVG 480 DNDYIFAFKH VVLPIAAEFA PDITIISAGF DAARGDPLGC CDVTPAGYSR MASMLTACSQ 540 GKLLVILEGG YNLRSISSSA TEVVKVLLGD SPVYDTDATE PSEEGIQTVL QVLSIQQQFW 600 PVLVPSFASV LALQRSVFSR YTTEVNKMKR KHARGAGPFW WKWGSKRLLY EVLFEGRCLR 660 KTKDTGKEKL NDEAEP 676Protein Fasta Sequence
>ORUFI07G03770.1|Class-I|Oryza rufipogon MAGKDGLTRAEHEAHEPLFTVIPWPRRAPPKIQSREASAAAAGIALQIALHALMASDMRSLNSQKGQSCGVSDQACHSKSKSGNDGKPSHAKANGVSSLSGSHNDEKILKENSGACNLNSDHANPLSVDGTKVSTARSELIDSSGHDGCLHVKNESCMACDDLLQESDKEQPGGTLEDLFSFNDEEDDDSDWEPSARLALSRWFCLNCTVPNMEGFTHCQNCDELKGSVVVGYDAFKAHLAQAALLSADAALPSVSTAVGFDERMLLHSEIEIKPNPHPERPDRLRAIAASLAAAGIFPSKCVMVPPREITKEELLRVHTSDHIDSVEQTKNMLYSYFTSDTYANGHSACAAKLAAGICADLANLIVSGRVRNGFAMVRPPGHHAGVKQAMGFCLHNNAAVAALAAQRAGAKKVLIVDWDVHHGNGTQEIFDGDNSVLYISLHRHEDGSFYPGTGAANEVGVMDGQGFSVNIPWSRGGVGDNDYIFAFKHVVLPIAAEFAPDITIISAGFDAARGDPLGCCDVTPAGYSRMASMLTACSQGKLLVILEGGYNLRSISSSATEVVKVLLGDSPVYDTDATEPSEEGIQTVLQVLSIQQQFWPVLVPSFASVLALQRSVFSRYTTEVNKMKRKHARGAGPFWWKWGSKRLLYEVLFEGRCLRKTKDTGKEKLNDEAEP
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Nucleotide Sequence (Fasta) | ATGGCAGGCA AAGACGGACT CACTCGAGCC GAGCACGAAG CGCACGAGCC GCTCTTCACA 60 GTCATCCCGT GGCCGCGCCG CGCCCCTCCA AAAATCCAAT CGCGAGAGGC GAGCGCCGCC 120 GCCGCCGGGA TCGCCCTCCA GATTGCGTTG CATGCTCTGA TGGCGTCTGA TATGAGGTCA 180 CTCAACAGCC AAAAGGGACA GAGTTGTGGA GTTTCAGACC AAGCTTGCCA CAGCAAAAGC 240 AAAAGCGGCA ATGATGGAAA ACCATCACAT GCTAAAGCAA ATGGAGTTTC CTCGTTGAGC 300 GGGAGTCATA ATGATGAGAA AATTTTGAAA GAGAACTCTG GAGCATGCAA TTTAAATTCC 360 GACCATGCCA ATCCTTTATC AGTAGATGGG ACCAAAGTTT CTACAGCAAG GTCGGAACTT 420 ATTGACAGTT CAGGCCATGA TGGTTGTCTG CATGTCAAGA ATGAAAGCTG TATGGCTTGT 480 GATGATCTGC TTCAAGAGTC TGACAAAGAA CAGCCTGGGG GTACACTGGA GGATCTATTT 540 TCCTTTAATG ATGAAGAGGA TGATGACAGT GACTGGGAAC CCTCTGCTCG CCTTGCTTTG 600 AGCAGGTGGT TTTGCTTGAA CTGTACAGTG CCAAACATGG AGGGGTTTAC ACATTGTCAG 660 AATTGCGATG AGCTTAAGGG ATCTGTGGTA GTTGGATATG ATGCTTTCAA AGCTCATCTT 720 GCACAGGCAG CTTTGTTATC TGCTGACGCA GCGCTGCCAT CAGTATCTAC AGCTGTCGGT 780 TTTGATGAAA GAATGTTGCT CCATAGTGAG ATAGAGATTA AACCAAATCC ACATCCAGAA 840 AGGCCTGACC GCCTTCGTGC AATCGCTGCC AGTCTTGCTG CTGCAGGTAT CTTCCCTTCA 900 AAATGTGTCA TGGTACCTCC TCGAGAAATC ACTAAGGAAG AACTCCTAAG GGTCCATACT 960 TCAGATCACA TTGACAGTGT TGAGCAGACA AAGAACATGC TTTACAGTTA CTTCACTTCA 1020 GATACCTATG CAAATGGACA CTCAGCATGT GCTGCCAAAC TTGCAGCAGG GATATGTGCT 1080 GATCTTGCTA ACTTGATAGT ATCTGGGCGT GTTCGCAATG GATTTGCAAT GGTGAGACCT 1140 CCTGGCCATC ATGCAGGGGT GAAACAAGCC ATGGGTTTTT GTCTTCACAA TAATGCAGCA 1200 GTGGCTGCAT TAGCTGCACA AAGAGCTGGT GCCAAGAAAG TCTTAATAGT TGACTGGGAT 1260 GTCCACCATG GCAATGGAAC ACAGGAGATA TTTGATGGGG ACAATTCTGT CTTGTACATA 1320 TCATTACATC GGCATGAGGA TGGAAGCTTC TACCCTGGAA CTGGGGCAGC AAATGAGGTG 1380 GGAGTTATGG ATGGCCAAGG ATTCTCAGTC AATATACCTT GGAGCCGTGG TGGTGTTGGA 1440 GACAATGACT ACATATTTGC TTTTAAGCAT GTGGTGCTTC CGATAGCTGC AGAATTTGCT 1500 CCAGACATCA CCATCATATC TGCAGGATTT GATGCAGCGA GGGGTGACCC TCTGGGTTGT 1560 TGTGATGTCA CACCTGCTGG ATATTCTAGG ATGGCGTCCA TGCTAACTGC TTGTTCACAG 1620 GGAAAATTGT TGGTTATACT TGAGGGAGGA TACAATCTTC GGTCTATATC CTCATCAGCT 1680 ACTGAAGTTG TTAAGGTCCT ACTTGGGGAT AGTCCTGTTT ATGATACAGA TGCAACTGAA 1740 CCATCAGAGG AGGGCATACA GACTGTCTTA CAAGTCCTGA GTATCCAGCA GCAATTTTGG 1800 CCAGTTTTAG TTCCATCCTT TGCATCAGTT CTGGCACTGC AGCGGTCGGT TTTTTCCAGA 1860 TATACCACTG AAGTAAACAA GATGAAAAGG AAGCATGCAA GAGGGGCAGG ACCCTTCTGG 1920 TGGAAATGGG GGAGTAAAAG GCTACTGTAC GAAGTGCTAT TTGAGGGCCG CTGTCTGAGG 1980 AAAACCAAGG ATACAGGCAA AGAAAAATTG AATGATGAAG CAGAGCCCTA AAT
2034Nucleotide Fasta Sequence
>ORUFI07G03770.1|Class-I|Oryza rufipogon ATGGCAGGCAAAGACGGACTCACTCGAGCCGAGCACGAAGCGCACGAGCCGCTCTTCACAGTCATCCCGTGGCCGCGCCGCGCCCCTCCAAAAATCCAATCGCGAGAGGCGAGCGCCGCCGCCGCCGGGATCGCCCTCCAGATTGCGTTGCATGCTCTGATGGCGTCTGATATGAGGTCACTCAACAGCCAAAAGGGACAGAGTTGTGGAGTTTCAGACCAAGCTTGCCACAGCAAAAGCAAAAGCGGCAATGATGGAAAACCATCACATGCTAAAGCAAATGGAGTTTCCTCGTTGAGCGGGAGTCATAATGATGAGAAAATTTTGAAAGAGAACTCTGGAGCATGCAATTTAAATTCCGACCATGCCAATCCTTTATCAGTAGATGGGACCAAAGTTTCTACAGCAAGGTCGGAACTTATTGACAGTTCAGGCCATGATGGTTGTCTGCATGTCAAGAATGAAAGCTGTATGGCTTGTGATGATCTGCTTCAAGAGTCTGACAAAGAACAGCCTGGGGGTACACTGGAGGATCTATTTTCCTTTAATGATGAAGAGGATGATGACAGTGACTGGGAACCCTCTGCTCGCCTTGCTTTGAGCAGGTGGTTTTGCTTGAACTGTACAGTGCCAAACATGGAGGGGTTTACACATTGTCAGAATTGCGATGAGCTTAAGGGATCTGTGGTAGTTGGATATGATGCTTTCAAAGCTCATCTTGCACAGGCAGCTTTGTTATCTGCTGACGCAGCGCTGCCATCAGTATCTACAGCTGTCGGTTTTGATGAAAGAATGTTGCTCCATAGTGAGATAGAGATTAAACCAAATCCACATCCAGAAAGGCCTGACCGCCTTCGTGCAATCGCTGCCAGTCTTGCTGCTGCAGGTATCTTCCCTTCAAAATGTGTCATGGTACCTCCTCGAGAAATCACTAAGGAAGAACTCCTAAGGGTCCATACTTCAGATCACATTGACAGTGTTGAGCAGACAAAGAACATGCTTTACAGTTACTTCACTTCAGATACCTATGCAAATGGACACTCAGCATGTGCTGCCAAACTTGCAGCAGGGATATGTGCTGATCTTGCTAACTTGATAGTATCTGGGCGTGTTCGCAATGGATTTGCAATGGTGAGACCTCCTGGCCATCATGCAGGGGTGAAACAAGCCATGGGTTTTTGTCTTCACAATAATGCAGCAGTGGCTGCATTAGCTGCACAAAGAGCTGGTGCCAAGAAAGTCTTAATAGTTGACTGGGATGTCCACCATGGCAATGGAACACAGGAGATATTTGATGGGGACAATTCTGTCTTGTACATATCATTACATCGGCATGAGGATGGAAGCTTCTACCCTGGAACTGGGGCAGCAAATGAGGTGGGAGTTATGGATGGCCAAGGATTCTCAGTCAATATACCTTGGAGCCGTGGTGGTGTTGGAGACAATGACTACATATTTGCTTTTAAGCATGTGGTGCTTCCGATAGCTGCAGAATTTGCTCCAGACATCACCATCATATCTGCAGGATTTGATGCAGCGAGGGGTGACCCTCTGGGTTGTTGTGATGTCACACCTGCTGGATATTCTAGGATGGCGTCCATGCTAACTGCTTGTTCACAGGGAAAATTGTTGGTTATACTTGAGGGAGGATACAATCTTCGGTCTATATCCTCATCAGCTACTGAAGTTGTTAAGGTCCTACTTGGGGATAGTCCTGTTTATGATACAGATGCAACTGAACCATCAGAGGAGGGCATACAGACTGTCTTACAAGTCCTGAGTATCCAGCAGCAATTTTGGCCAGTTTTAGTTCCATCCTTTGCATCAGTTCTGGCACTGCAGCGGTCGGTTTTTTCCAGATATACCACTGAAGTAAACAAGATGAAAAGGAAGCATGCAAGAGGGGCAGGACCCTTCTGGTGGAAATGGGGGAGTAAAAGGCTACTGTACGAAGTGCTATTTGAGGGCCGCTGTCTGAGGAAAACCAAGGATACAGGCAAAGAAAAATTGAATGATGAAGCAGAGCCCTAAAT
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Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |