Tag |
Content |
WERAM ID |
WERAM-Ori-0081 |
Ensembl Protein ID |
BGIOSGA024767-PA |
Gene Name |
OsI_25007 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
5.30e-114 |
381.7 |
204 |
516 |
HDAC |
Class-I |
2.50e-37 |
130.1 |
224 |
509 |
|
Organism |
Oryza indica |
Domain Profile |
HDAC Class-II
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeaglle.kleelkarkatkeelqlvHseehvelletaeklekeelesltvdsdsiy 93 +++ +de+ml h+ +e + + hpE+p+R++ai +l++ag+ + k++ + r+ tkeel+ vH+++h++ +e+++++ + + ++y BGIOSGA024767-PA 204 TAVGFDERMLLHSEIEIKPNPHPERPDRLRAIAASLAAAGIFPsKCVMVPPREITKEELLRVHTSDHIDSVEQTKNMLYSYFT------SDTY 290 6799***********************************999758*****************************665555444......478* PP class-2.txt 94 lesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkilivDwDvHhGnGtqeifykdp 186 ++ +s+ aa+la+G + +l++ +++g+++ngfa+vRPPGHHa ++amGFCl+nn+avaa +q+ +kk+livDwDvHhGnGtqeif d+ BGIOSGA024767-PA 291 ANGHSACAAKLAAGICADLANLIVSGRVRNGFAMVRPPGHHAGVKQAMGFCLHNNAAVAALAAQRAG-AKKVLIVDWDVHHGNGTQEIFDGDN 382 ***********************************************************98777665.5************************ PP class-2.txt 187 kvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgglsvtak 279 +vly+SlHR+++gsf+p g+ga++evg +g+gf+vN++w+ g++gd++y++af++vvlpia eF+Pd+ ++saGfDaa+gdplg ++vt++ BGIOSGA024767-PA 383 SVLYISLHRHEDGSFYP--GTGAANEVGVMDGQGFSVNIPWSRGGVGDNDYIFAFKHVVLPIAAEFAPDITIISAGFDAARGDPLGCCDVTPA 473 *****************..************************************************************************** PP class-2.txt 280 cyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322 +y++++ +l+ ++g+++++lEGGynl++i++++++vvk+Llg BGIOSGA024767-PA 474 GYSRMASMLTACSQGKLLVILEGGYNLRSISSSATEVVKVLLG 516 *****************************************96 PP
HDAC Class-I
class-1.txt 19 khpmkpkrlslth.eLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycqlitGasl 110 hp +p rl+ + +L+ + k +v p++ ++eell++h+ ++i+ +++ ++ + ++ + ++ g+ + + +G BGIOSGA024767-PA 224 PHPERPDRLRAIAaSLAAAGIFPSKCVMVPPREITKEELLRVHTSDHIDSVEQTKNMLYSYFT--SDTYANGHSACAAKLA-------AGICA 307 5889999998665166666667788889999999999*******9999998887776666666..5567777766555444.......44444 PP class-1.txt 111 eaakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellk.khkrvlyididlhhGDgveeafyttdrvmtvsfhkygee.ffP 199 + a+ + +++ a+ G hha ++a Gfc n+ +a l ++ k+vl +d d+hhG+g +e f + v+ +s+h+++++ f+P BGIOSGA024767-PA 308 DLANLIVSGRVRngFAMVRPPG-HHAGVKQAMGFCLHNNAAVAALAAQRaGAKKVLIVDWDVHHGNGTQEIFDGDNSVLYISLHRHEDGsFYP 399 4444444443330044444444.999999**********99999999886799*********************************985499* PP class-1.txt 200 gtGdlsdvgaekgkyyavnvPl.kdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksf.nlpllv 290 gtG ++vg+ +g+ ++vn+P + g+ D+ y fk+v+ ++ f P++ ++ G D+ gD+lg+ +++ g++++ +++ + +llv BGIOSGA024767-PA 400 GTGAANEVGVMDGQGFSVNIPWsRGGVGDNDYIFAFKHVVLPIAAEFAPDITIISAGFDAARGDPLGCCDVTPAGYSRMASMLTACsQGKLLV 492 *********************83568*******************************************************999987889*** PP class-1.txt 291 lGGGGYtlrnvaRcwty 307 + GGY+lr ++ t BGIOSGA024767-PA 493 ILEGGYNLRSISSSATE 509 *********99976665 PP
|
Protein Sequence (Fasta) | MASDMRSLNS QKGQSCGVSD QACHSKSKSG NDGKPSHAKA NGVSSLSGSH NDEKILKENS 60 GACNLNSDHA NPLSVDGTKV STARSELIDS SGHDGCLHVK NESCMACDDL LQESDKEQPG 120 GTLEDLFSFN DEEDDDSDWE PSARLALSRW FCLNCTVPNM EGFTHCQNCD ELKGSVVVGY 180 DAFKAHLAQA ALLSADAALP SVSTAVGFDE RMLLHSEIEI KPNPHPERPD RLRAIAASLA 240 AAGIFPSKCV MVPPREITKE ELLRVHTSDH IDSVEQTKNM LYSYFTSDTY ANGHSACAAK 300 LAAGICADLA NLIVSGRVRN GFAMVRPPGH HAGVKQAMGF CLHNNAAVAA LAAQRAGAKK 360 VLIVDWDVHH GNGTQEIFDG DNSVLYISLH RHEDGSFYPG TGAANEVGVM DGQGFSVNIP 420 WSRGGVGDND YIFAFKHVVL PIAAEFAPDI TIISAGFDAA RGDPLGCCDV TPAGYSRMAS 480 MLTACSQGKL LVILEGGYNL RSISSSATEV VKVLLGDSPV YDTDATEPSE EGIQTVLQVL 540 SIQQQFWPVL VPSFASVLAL QRSVFSRYTT EVNKMKRKHA GGAGPFWWKW GSKRLLYEVL 600 FEGRCLRKTK DTGKEKLNDE AEP 623Protein Fasta Sequence
>BGIOSGA024767-PA|Class-I|Oryza indica MASDMRSLNSQKGQSCGVSDQACHSKSKSGNDGKPSHAKANGVSSLSGSHNDEKILKENSGACNLNSDHANPLSVDGTKVSTARSELIDSSGHDGCLHVKNESCMACDDLLQESDKEQPGGTLEDLFSFNDEEDDDSDWEPSARLALSRWFCLNCTVPNMEGFTHCQNCDELKGSVVVGYDAFKAHLAQAALLSADAALPSVSTAVGFDERMLLHSEIEIKPNPHPERPDRLRAIAASLAAAGIFPSKCVMVPPREITKEELLRVHTSDHIDSVEQTKNMLYSYFTSDTYANGHSACAAKLAAGICADLANLIVSGRVRNGFAMVRPPGHHAGVKQAMGFCLHNNAAVAALAAQRAGAKKVLIVDWDVHHGNGTQEIFDGDNSVLYISLHRHEDGSFYPGTGAANEVGVMDGQGFSVNIPWSRGGVGDNDYIFAFKHVVLPIAAEFAPDITIISAGFDAARGDPLGCCDVTPAGYSRMASMLTACSQGKLLVILEGGYNLRSISSSATEVVKVLLGDSPVYDTDATEPSEEGIQTVLQVLSIQQQFWPVLVPSFASVLALQRSVFSRYTTEVNKMKRKHAGGAGPFWWKWGSKRLLYEVLFEGRCLRKTKDTGKEKLNDEAEP
|
Nucleotide Sequence (Fasta) | ATGGCGTCTG ATATGAGGTC ACTCAACAGC CAAAAGGGAC AGAGTTGTGG AGTTTCAGAC 60 CAAGCTTGCC ACAGCAAAAG CAAAAGCGGC AATGATGGAA AACCATCACA TGCTAAAGCA 120 AATGGAGTTT CCTCGTTGAG CGGGAGTCAT AATGATGAGA AAATTTTGAA AGAGAACTCT 180 GGAGCATGCA ATTTAAATTC CGACCATGCC AATCCTTTAT CAGTAGATGG GACCAAAGTT 240 TCTACAGCAA GGTCGGAACT TATTGACAGT TCAGGCCATG ATGGTTGTCT GCATGTCAAG 300 AATGAAAGCT GTATGGCTTG TGATGATCTG CTTCAAGAGT CTGACAAAGA ACAGCCTGGG 360 GGTACACTGG AGGATCTATT TTCCTTTAAT GATGAAGAGG ATGATGACAG TGACTGGGAA 420 CCCTCTGCTC GCCTTGCTTT GAGCAGGTGG TTTTGCTTGA ACTGTACAGT GCCAAACATG 480 GAGGGGTTTA CACATTGTCA GAATTGCGAT GAGCTTAAGG GATCTGTGGT AGTTGGATAT 540 GATGCTTTCA AAGCTCATCT TGCACAGGCA GCTTTGTTAT CTGCTGACGC AGCGCTGCCA 600 TCAGTATCTA CAGCTGTCGG TTTTGATGAA AGAATGTTGC TCCATAGTGA GATAGAGATT 660 AAACCAAATC CACATCCAGA AAGGCCTGAC CGCCTTCGTG CAATCGCTGC CAGTCTTGCT 720 GCTGCAGGTA TCTTCCCTTC AAAATGTGTC ATGGTACCTC CTCGAGAAAT CACTAAGGAA 780 GAACTCCTAA GGGTCCATAC TTCAGATCAC ATTGACAGTG TTGAGCAGAC AAAGAACATG 840 CTTTACAGTT ACTTCACTTC AGATACCTAT GCAAATGGAC ACTCAGCATG TGCTGCCAAA 900 CTTGCAGCAG GGATATGTGC TGATCTTGCT AACTTGATAG TATCTGGGCG TGTTCGCAAT 960 GGATTTGCAA TGGTGAGACC TCCTGGCCAT CATGCAGGGG TGAAACAAGC CATGGGTTTT 1020 TGTCTTCACA ATAATGCAGC AGTGGCTGCA TTAGCTGCAC AAAGAGCTGG TGCCAAGAAA 1080 GTCTTAATAG TTGACTGGGA TGTCCACCAT GGCAATGGAA CACAGGAGAT ATTTGATGGG 1140 GACAATTCTG TCTTGTACAT ATCATTACAT CGGCATGAGG ATGGAAGCTT CTACCCTGGA 1200 ACTGGGGCAG CAAATGAGGT GGGAGTTATG GATGGCCAAG GATTCTCAGT CAATATACCT 1260 TGGAGCCGTG GTGGTGTTGG AGACAATGAC TACATATTTG CTTTTAAGCA TGTGGTGCTT 1320 CCGATAGCTG CAGAATTTGC TCCAGACATC ACCATCATAT CTGCAGGATT TGATGCAGCG 1380 AGGGGTGACC CTCTGGGTTG TTGTGATGTC ACACCTGCTG GATATTCTAG GATGGCGTCC 1440 ATGCTAACTG CTTGTTCACA GGGAAAATTG TTGGTTATAC TTGAGGGAGG ATACAATCTT 1500 CGGTCTATAT CCTCATCAGC TACTGAAGTT GTTAAGGTCC TACTTGGGGA TAGTCCTGTT 1560 TATGATACAG ATGCAACTGA ACCATCAGAG GAGGGCATAC AGACTGTCTT ACAAGTCCTG 1620 AGTATCCAGC AGCAATTTTG GCCAGTTTTA GTTCCATCCT TTGCATCAGT TCTGGCACTG 1680 CAGCGGTCGG TTTTTTCCAG ATATACCACT GAAGTAAACA AGATGAAAAG GAAGCATGCA 1740 GGAGGGGCAG GACCCTTCTG GTGGAAATGG GGGAGTAAAA GGCTACTGTA CGAAGTGCTA 1800 TTTGAGGGCC GCTGTCTGAG GAAAACCAAG GATACAGGCA AAGAAAAATT GAATGATGAA 1860 GCAGAGCCCT AA
1873Nucleotide Fasta Sequence
>BGIOSGA024767-PA|Class-I|Oryza indica ATGGCGTCTGATATGAGGTCACTCAACAGCCAAAAGGGACAGAGTTGTGGAGTTTCAGACCAAGCTTGCCACAGCAAAAGCAAAAGCGGCAATGATGGAAAACCATCACATGCTAAAGCAAATGGAGTTTCCTCGTTGAGCGGGAGTCATAATGATGAGAAAATTTTGAAAGAGAACTCTGGAGCATGCAATTTAAATTCCGACCATGCCAATCCTTTATCAGTAGATGGGACCAAAGTTTCTACAGCAAGGTCGGAACTTATTGACAGTTCAGGCCATGATGGTTGTCTGCATGTCAAGAATGAAAGCTGTATGGCTTGTGATGATCTGCTTCAAGAGTCTGACAAAGAACAGCCTGGGGGTACACTGGAGGATCTATTTTCCTTTAATGATGAAGAGGATGATGACAGTGACTGGGAACCCTCTGCTCGCCTTGCTTTGAGCAGGTGGTTTTGCTTGAACTGTACAGTGCCAAACATGGAGGGGTTTACACATTGTCAGAATTGCGATGAGCTTAAGGGATCTGTGGTAGTTGGATATGATGCTTTCAAAGCTCATCTTGCACAGGCAGCTTTGTTATCTGCTGACGCAGCGCTGCCATCAGTATCTACAGCTGTCGGTTTTGATGAAAGAATGTTGCTCCATAGTGAGATAGAGATTAAACCAAATCCACATCCAGAAAGGCCTGACCGCCTTCGTGCAATCGCTGCCAGTCTTGCTGCTGCAGGTATCTTCCCTTCAAAATGTGTCATGGTACCTCCTCGAGAAATCACTAAGGAAGAACTCCTAAGGGTCCATACTTCAGATCACATTGACAGTGTTGAGCAGACAAAGAACATGCTTTACAGTTACTTCACTTCAGATACCTATGCAAATGGACACTCAGCATGTGCTGCCAAACTTGCAGCAGGGATATGTGCTGATCTTGCTAACTTGATAGTATCTGGGCGTGTTCGCAATGGATTTGCAATGGTGAGACCTCCTGGCCATCATGCAGGGGTGAAACAAGCCATGGGTTTTTGTCTTCACAATAATGCAGCAGTGGCTGCATTAGCTGCACAAAGAGCTGGTGCCAAGAAAGTCTTAATAGTTGACTGGGATGTCCACCATGGCAATGGAACACAGGAGATATTTGATGGGGACAATTCTGTCTTGTACATATCATTACATCGGCATGAGGATGGAAGCTTCTACCCTGGAACTGGGGCAGCAAATGAGGTGGGAGTTATGGATGGCCAAGGATTCTCAGTCAATATACCTTGGAGCCGTGGTGGTGTTGGAGACAATGACTACATATTTGCTTTTAAGCATGTGGTGCTTCCGATAGCTGCAGAATTTGCTCCAGACATCACCATCATATCTGCAGGATTTGATGCAGCGAGGGGTGACCCTCTGGGTTGTTGTGATGTCACACCTGCTGGATATTCTAGGATGGCGTCCATGCTAACTGCTTGTTCACAGGGAAAATTGTTGGTTATACTTGAGGGAGGATACAATCTTCGGTCTATATCCTCATCAGCTACTGAAGTTGTTAAGGTCCTACTTGGGGATAGTCCTGTTTATGATACAGATGCAACTGAACCATCAGAGGAGGGCATACAGACTGTCTTACAAGTCCTGAGTATCCAGCAGCAATTTTGGCCAGTTTTAGTTCCATCCTTTGCATCAGTTCTGGCACTGCAGCGGTCGGTTTTTTCCAGATATACCACTGAAGTAAACAAGATGAAAAGGAAGCATGCAGGAGGGGCAGGACCCTTCTGGTGGAAATGGGGGAGTAAAAGGCTACTGTACGAAGTGCTATTTGAGGGCCGCTGTCTGAGGAAAACCAAGGATACAGGCAAAGAAAAATTGAATGATGAAGCAGAGCCCTAA
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |