class-2.txt   2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeelesltvdsdsiylesk 97 
                    +glvyde+m+kh+++ ++   hpE+p+Ri+ i+++lq ag++++++ l + ka++ +lqlvH+++hv+l+++++++++ + +++++ ++siyl+ +
  Bra035942.1-P  16 VGLVYDETMCKHDTPDGEA--HPERPDRIRVIWEKLQLAGVTQRCVVLGGTKAEDAHLQLVHTKDHVNLVKSSTNKKDYQSDRVASLVNSIYLNGS 109
                    78**************999..****************************************************9999999**************** PP
    class-2.txt  98 sikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklk...vkkilivDwDvHhGnGtqeifykdpkvly 190
                    +++aa la+G+v+e+++kv+kgel+ gfa+vRPPGHHae+++amGFC+fnnvavaa++l+++ +   vkkil+vDwDvHhGnGtq++f++dp+vl 
  Bra035942.1-P 110 TSEAAYLAAGSVVEVAEKVAKGELDSGFAIVRPPGHHAEADEAMGFCFFNNVAVAASYLLDERPdlgVKKILVVDWDVHHGNGTQKMFWEDPRVLV 205
                    ************************************************************9987788***************************** PP
    class-2.txt 191 lSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgglsvtakcyatltk 286
                    +S+HR+++g f+p  ++g+++ vgeg+gegfn+Nv+w++g +gda+ylaa++++++p+akeF+Pd++l+saGfDaa gdplgg++vt+ +y+ + k
  Bra035942.1-P 206 FSVHRHEDGGFYPGGDDGSYNMVGEGPGEGFNINVPWEQGRCGDADYLAAWDHILIPVAKEFNPDIILLSAGFDAAIGDPLGGCRVTPYGYSVMLK 301
                    *************999******************************************************************************** PP
    class-2.txt 287 qllklaggrvvlvlEGGynlkaiaeaveavvkaLl 321
                    +l+++a+g++v++lEGGynl++ia+++ a+v++Ll
  Bra035942.1-P 302 KLMEFAQGKIVMALEGGYNLDSIAKSSLACVQVLL 336
                    **********************************8 PP

    class-1.txt   4 ayaydedvgeyhy..gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdg 97 
                      +yde++ ++ +  g+ hp +p r++++ e +   g++++  ++  +ka+ ++l+ +h++++++++k+++++++ +     +  ++ +   +   
  Bra035942.1-P  17 GLVYDETMCKHDTpdGEAHPERPDRIRVIWEKLQLAGVTQRCVVLGGTKAEDAHLQLVHTKDHVNLVKSSTNKKDYQSD---RVASLVNSIYLNGS 109
                    566777777666544899************999999******************************9988765544433...33345556667777 PP
    class-1.txt  98 lfeycqlitGasleaakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellkk.....hkrvlyididlhhGDgveeafyttdrvm 186
                      e + l +G+ +e a+k+ k+e d   ai    G hha  +ea Gfc+ n++ +a   ll +      k++l +d d+hhG+g ++ f +  rv+
  Bra035942.1-P 110 TSEAAYLAAGSVVEVAEKVAKGELDsgFAIVRPPG-HHAEADEAMGFCFFNNVAVAASYLLDErpdlgVKKILVVDWDVHHGNGTQKMFWEDPRVL 204
                    88889999**************9882245655555.*********************9999752333369************************** PP
    class-1.txt 187 tvsfhkyge.effPgt..GdlsdvgaekgkyyavnvPlkdg.idDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecv 278
                      s+h++++ +f+Pg   G+ + vg++ g  + +nvP ++g + D  y +   +++ +v + f+P++++l  G D+  gD+lg   ++  g++ ++
  Bra035942.1-P 205 VFSVHRHEDgGFYPGGddGSYNMVGEGPGEGFNINVPWEQGrCGDADYLAAWDHILIPVAKEFNPDIILLSAGFDAAIGDPLGGCRVTPYGYSVML 300
                    *******98469**964488999****************99799**************************************************** PP
    class-1.txt 279 kfvksf.nlpllvlGGGGYtlrnvaRc 304
                    k + +f + ++++   GGY+l  +a+ 
  Bra035942.1-P 301 KKLMEFaQGKIVMALEGGYNLDSIAKS 327
                    ******7778888889*****999975 PP