Tag |
Content |
WERAM ID |
WERAM-Cap-0074 |
Ensembl Protein ID |
ENSCPOP00000005427.2 |
Gene Name |
HDAC7 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
6.10e-147 |
488.9 |
525 |
866 |
HDAC |
Class-I |
3.40e-30 |
105.6 |
544 |
835 |
|
Organism |
Cavia porcellus |
Domain Profile |
HDAC Class-II
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles...... 84 +glvyd+ mlkhq+ ++++++hpE+++Riq+i+srlqe+gl++++e+l++rka++eelq+vHse+h+ l++t+ +l++ +l++ ENSCPOP00000005427.2 525 TGLVYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHSERHMLLYGTN-PLSRLKLDNeklsel 612 689**********************************************************************.9999999999999** PP class-2.txt 85 .............ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqkl 160 ++vd+d+i++e +s++aar+a+G+v++l++kv++ elkngfavvRPPGHHa++stamGFC+fn+va+a+++lqq+ ENSCPOP00000005427.2 613 laqrmfvmlpcggVGVDTDTIWNELHSSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQG 701 ***************************************************************************************** PP class-2.txt 161 kvkkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafrevvl 246 k++kilivDwDvHhGnGtq++fy+dp+vly+SlHR+d+g+ffp gsgav+evg g+gegfnvNvaw ggl mgd eylaafr vv+ ENSCPOP00000005427.2 702 KASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFP--GSGAVEEVGAGSGEGFNVNVAWAGGLeppMGDPEYLAAFRIVVM 788 *******************************************..******************************************** PP class-2.txt 247 piakeFkPdlvlvsaGfDaaeg..dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322 pia+eF+PdlvlvsaGfDaaeg +plgg++v+akc++++t+ql++lagg vvl+lEGG++l+ai++a+ea+v aLlg ENSCPOP00000005427.2 789 PIAQEFSPDLVLVSAGFDAAEGhpAPLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLG 866 **********************999***************************************************96 PP
HDAC Class-I
class-1.txt 18 qkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyi.....eflkkvepenae.......elskelkkfnvgedc.P 93 ++hp r++ + + + + gl + e ++ +kas eel+++hse ++ + l++ + +n++ ++ l +vg d+ ENSCPOP00000005427.2 544 SRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHSERHMllygtNPLSRLKLDNEKlsellaqRMFVMLPCGGVGVDTdT 632 56888888999999999999999999999999999999999999988733333457888888877554433211122222355666524 PP class-1.txt 94 vfdglfey..cqlitGasleaakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellk..khkrvlyididlhhGDgve 176 + ++l++ ++ +G+ + a k+ ++e + a+ G hha +s a Gfc+ n + +a +l++ k +++l +d d+hhG+g + ENSCPOP00000005427.2 633 IWNELHSSnaARWAAGSVTDLAFKVASRELKngFAVVRPPG-HHADHSTAMGFCFFNSVAIACRQLQQqgKASKILIVDWDVHHGNGTQ 720 77777754114445666667788888776651255555555.************************9977899**************** PP class-1.txt 177 eafyttdrvmtvsfhkyge.effPgtGdlsdvgaekgkyyavnvPlkdg....idDesyekifksviskvieafePeavvlqcGaDsla 260 ++fy+ v+ +s+h++++ +ffPg+G +++vga++g + vnv g + D +y + f+ v+ ++ + f+P+ v++ G D+ ENSCPOP00000005427.2 721 QTFYQDPSVLYISLHRHDDgNFFPGSGAVEEVGAGSGEGFNVNVAWAGGleppMGDPEYLAAFRIVVMPIAQEFSPDLVLVSAGFDAAE 809 *****************8746***********************87666222267********************************99 PP class-1.txt 261 gD..rlgefnlsikghaecvkfvksf 284 g +lg +++s k ++ + + + + ENSCPOP00000005427.2 810 GHpaPLGGYHVSAKCFGYMTQQLMNL 835 86336999999999998877666555 PP
|
Protein Sequence (Fasta) | GYPSPCADTP DSQTQPMDLR VGQRPAVEPP PEAPLLALQH PPRLHRHLFL AGLQQQQQRP 60 AEPMRLSMDP SMPELQGGQQ EQELRQLLNK DKSKRSAVAS SVVKQKLAEV ILKKQQAALE 120 RTAHTNSPSI PYRTLEPLDT EGAARSMLSS FLPPIPSLPS DPPEHFPLRK TASEPNLKLR 180 YKPKKSLERR KNPLLRKESA PSSLRRRPAE PLGDSSPSSS STPASGCSSP NDSEHGPNPV 240 LGSEALLGQR LRLQETSLAP FALPTVSLLP AITLGLPAPA RADGDRRTHP TLGPRGSVLG 300 SSHTPLFLPH GLDPEAGGTL PSRLQPILLL DPSVSHAPLL TVPGLGPLPF HFAQSLLTTE 360 RLSGSGLHRP LSRTRSEQLE PHFQLIKLDV TPPQRTAKSS EKPRLQQIPS AEDLETDGGG 420 AGQVVDGSLE HRESSHRQPE ARGPVPLQQH QQVLLWERQR LSGRLPRGSP GDSVLLPLAQ 480 GGHRLLSRTQ SSPAAPASLP TPEPTCQPRV LSSSEAPAKT LPFITGLVYD SVMLKHQCSC 540 GDNSRHPEHA GRIQSIWSRL QERGLRSQCE CLRGRKASLE ELQSVHSERH MLLYGTNPLS 600 RLKLDNEKLS ELLAQRMFVM LPCGGVGVDT DTIWNELHSS NAARWAAGSV TDLAFKVASR 660 ELKNGFAVVR PPGHHADHST AMGFCFFNSV AIACRQLQQQ GKASKILIVD WDVHHGNGTQ 720 QTFYQDPSVL YISLHRHDDG NFFPGSGAVE EVGAGSGEGF NVNVAWAGGL EPPMGDPEYL 780 AAFRIVVMPI AQEFSPDLVL VSAGFDAAEG HPAPLGGYHV SAKCFGYMTQ QLMNLAGGAV 840 VLALEGGHDL TAICDASEAC VAALLGNKVD PLSEESWKQK PNLNAIRSLE AVIRVHSKYW 900 GCMQRLASSP NLWVPRVPGA DAEEVEAVTA LASLSVGILA EDRPSEQLVE EEEPMNL 957Protein Fasta Sequence
>ENSCPOP00000005427.2|Class-I|Cavia porcellus GYPSPCADTPDSQTQPMDLRVGQRPAVEPPPEAPLLALQHPPRLHRHLFLAGLQQQQQRPAEPMRLSMDPSMPELQGGQQEQELRQLLNKDKSKRSAVASSVVKQKLAEVILKKQQAALERTAHTNSPSIPYRTLEPLDTEGAARSMLSSFLPPIPSLPSDPPEHFPLRKTASEPNLKLRYKPKKSLERRKNPLLRKESAPSSLRRRPAEPLGDSSPSSSSTPASGCSSPNDSEHGPNPVLGSEALLGQRLRLQETSLAPFALPTVSLLPAITLGLPAPARADGDRRTHPTLGPRGSVLGSSHTPLFLPHGLDPEAGGTLPSRLQPILLLDPSVSHAPLLTVPGLGPLPFHFAQSLLTTERLSGSGLHRPLSRTRSEQLEPHFQLIKLDVTPPQRTAKSSEKPRLQQIPSAEDLETDGGGAGQVVDGSLEHRESSHRQPEARGPVPLQQHQQVLLWERQRLSGRLPRGSPGDSVLLPLAQGGHRLLSRTQSSPAAPASLPTPEPTCQPRVLSSSEAPAKTLPFITGLVYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHSERHMLLYGTNPLSRLKLDNEKLSELLAQRMFVMLPCGGVGVDTDTIWNELHSSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQGKASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVEEVGAGSGEGFNVNVAWAGGLEPPMGDPEYLAAFRIVVMPIAQEFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSEESWKQKPNLNAIRSLEAVIRVHSKYWGCMQRLASSPNLWVPRVPGADAEEVEAVTALASLSVGILAEDRPSEQLVEEEEPMNL
|
Nucleotide Sequence (Fasta) | GGCTACCCCT CTCCCTGTGC AGACACGCCG GATTCTCAGA CTCAGCCAAT GGACCTGCGG 60 GTGGGCCAGC GGCCTGCAGT GGAGCCCCCG CCAGAGGCCC CACTTCTGGC CCTGCAGCAC 120 CCCCCGCGCC TGCACCGCCA CCTCTTCCTA GCAGGCCTGC AGCAGCAGCA ACAGCGCCCG 180 GCCGAGCCCA TGAGGCTCTC CATGGACCCA TCGATGCCCG AACTGCAGGG TGGGCAGCAG 240 GAGCAAGAGC TGCGACAGCT TCTCAATAAG GACAAGAGCA AACGAAGCGC TGTAGCCAGC 300 AGTGTGGTGA AGCAGAAACT GGCCGAGGTG ATCCTGAAGA AACAGCAGGC AGCCCTGGAG 360 AGGACAGCTC ATACCAATAG CCCCAGCATT CCCTACAGAA CTCTTGAGCC CCTGGACACG 420 GAAGGAGCTG CTCGCTCCAT GCTTAGCAGC TTTCTGCCTC CCATTCCCAG CCTGCCCAGT 480 GACCCCCCTG AACACTTCCC CCTACGTAAG ACAGCCTCTG AGCCCAACCT GAAGCTGCGC 540 TACAAACCTA AGAAATCCCT GGAGCGAAGG AAGAACCCGC TGCTCAGGAA GGAGAGTGCA 600 CCGTCCAGTC TCCGGCGGCG ACCTGCAGAG CCTCTGGGAG ACTCCTCCCC CAGTAGTAGC 660 AGCACGCCCG CCTCAGGGTG CAGCTCCCCC AATGACAGCG AGCATGGCCC CAACCCTGTC 720 CTGGGCTCCG AGGCGCTCTT GGGCCAGCGG CTGCGGCTGC AGGAGACTTC TCTGGCCCCA 780 TTCGCCTTGC CGACAGTGTC CTTGCTGCCC GCAATTACAC TGGGACTGCC CGCCCCCGCC 840 AGGGCGGACG GAGACCGCAG GACCCATCCG ACTCTGGGCC CTCGGGGTTC AGTCCTGGGG 900 AGCTCCCATA CTCCCCTCTT CCTGCCCCAT GGTCTGGATC CCGAGGCCGG GGGCACTCTG 960 CCCTCTCGCC TGCAGCCCAT TCTCCTCCTG GATCCCTCAG TCTCTCATGC CCCCCTGCTG 1020 ACTGTGCCCG GGCTTGGGCC CCTGCCCTTC CACTTTGCCC AGTCCTTACT CACCACCGAG 1080 CGGCTCTCTG GGTCAGGCCT CCACCGGCCA CTGAGCCGGA CCCGCTCGGA GCAGCTCGAG 1140 CCTCACTTCC AGCTGATCAA GCTTGACGTC ACCCCTCCCC AGAGAACAGC CAAGTCAAGT 1200 GAGAAGCCCC GGCTACAGCA GATACCCTCG GCTGAGGACC TGGAGACAGA TGGCGGGGGA 1260 GCCGGCCAGG TGGTAGATGG CAGCCTGGAA CACAGGGAGT CGAGCCATAG GCAGCCTGAG 1320 GCCAGGGGCC CTGTTCCTCT TCAGCAGCAC CAGCAGGTGT TGCTCTGGGA GCGGCAGCGT 1380 CTGTCTGGGC GGCTGCCCCG AGGGAGCCCT GGGGACTCTG TGCTGCTCCC CCTGGCCCAG 1440 GGCGGACACC GGCTCTTGTC TAGGACTCAG TCCTCCCCTG CTGCACCTGC CTCACTACCA 1500 ACTCCAGAGC CCACTTGCCA GCCCCGGGTC CTCTCCAGCT CCGAAGCCCC TGCCAAGACC 1560 CTGCCCTTTA TCACAGGGCT GGTCTATGAT TCCGTAATGC TGAAGCACCA GTGCTCCTGC 1620 GGAGACAACA GCCGGCACCC GGAGCATGCT GGCCGCATCC AGAGCATCTG GTCCCGGCTG 1680 CAAGAGCGAG GCCTCCGGAG CCAGTGTGAG TGTCTCCGGG GCCGGAAGGC CTCCCTAGAG 1740 GAGCTTCAGT CAGTCCACTC TGAGCGGCAC ATGCTTCTAT ATGGCACCAA CCCACTCAGC 1800 CGCCTTAAAC TGGACAACGA GAAGCTGTCA GAGCTCCTGG CACAGCGGAT GTTTGTGATG 1860 CTGCCCTGTG GTGGGGTTGG GGTGGATACT GACACCATCT GGAATGAGCT GCATTCTTCC 1920 AATGCAGCCC GTTGGGCTGC TGGCAGTGTC ACTGACCTCG CCTTCAAAGT GGCTTCCCGA 1980 GAGCTCAAGA ACGGTTTTGC TGTGGTGCGG CCCCCAGGAC ACCATGCAGA TCATTCCACG 2040 GCCATGGGCT TCTGCTTCTT CAACTCGGTA GCCATTGCCT GCCGTCAGCT GCAACAACAA 2100 GGCAAGGCCA GCAAGATCCT CATTGTAGAC TGGGATGTTC ACCATGGCAA TGGCACCCAG 2160 CAGACCTTCT ACCAGGACCC CAGTGTGCTG TACATCTCCC TGCATCGCCA CGATGATGGC 2220 AACTTCTTCC CCGGCAGTGG GGCTGTGGAA GAGGTCGGAG CTGGCAGTGG TGAGGGCTTC 2280 AATGTCAATG TGGCCTGGGC TGGAGGCCTG GAGCCTCCCA TGGGGGATCC CGAGTATCTG 2340 GCTGCATTCA GGATAGTCGT GATGCCCATC GCCCAAGAAT TCTCTCCAGA TCTGGTCCTG 2400 GTATCAGCTG GGTTTGATGC TGCTGAGGGT CACCCAGCCC CTCTGGGTGG CTACCATGTC 2460 TCTGCCAAAT GTTTTGGGTA CATGACACAG CAGCTGATGA ACTTGGCAGG AGGCGCTGTG 2520 GTGCTAGCCT TGGAGGGTGG CCATGACCTC ACAGCCATCT GCGATGCCTC CGAGGCTTGT 2580 GTGGCTGCTC TTTTGGGCAA CAAGGTGGAT CCCCTTTCAG AAGAAAGCTG GAAACAGAAA 2640 CCCAACCTCA ATGCCATCCG TTCCCTGGAA GCTGTGATCC GGGTGCACAG TAAATATTGG 2700 GGCTGCATGC AGCGCCTAGC CTCCTCTCCG AACCTCTGGG TGCCCAGGGT ACCAGGGGCT 2760 GATGCAGAAG AAGTAGAGGC TGTGACCGCA CTGGCATCCC TCTCTGTGGG CATCCTGGCT 2820 GAAGATAGGC CCTCAGAGCA ACTGGTGGAA GAGGAAGAAC CGATGAATCT CTAA
2875Nucleotide Fasta Sequence
>ENSCPOP00000005427.2|Class-I|Cavia porcellus GGCTACCCCTCTCCCTGTGCAGACACGCCGGATTCTCAGACTCAGCCAATGGACCTGCGGGTGGGCCAGCGGCCTGCAGTGGAGCCCCCGCCAGAGGCCCCACTTCTGGCCCTGCAGCACCCCCCGCGCCTGCACCGCCACCTCTTCCTAGCAGGCCTGCAGCAGCAGCAACAGCGCCCGGCCGAGCCCATGAGGCTCTCCATGGACCCATCGATGCCCGAACTGCAGGGTGGGCAGCAGGAGCAAGAGCTGCGACAGCTTCTCAATAAGGACAAGAGCAAACGAAGCGCTGTAGCCAGCAGTGTGGTGAAGCAGAAACTGGCCGAGGTGATCCTGAAGAAACAGCAGGCAGCCCTGGAGAGGACAGCTCATACCAATAGCCCCAGCATTCCCTACAGAACTCTTGAGCCCCTGGACACGGAAGGAGCTGCTCGCTCCATGCTTAGCAGCTTTCTGCCTCCCATTCCCAGCCTGCCCAGTGACCCCCCTGAACACTTCCCCCTACGTAAGACAGCCTCTGAGCCCAACCTGAAGCTGCGCTACAAACCTAAGAAATCCCTGGAGCGAAGGAAGAACCCGCTGCTCAGGAAGGAGAGTGCACCGTCCAGTCTCCGGCGGCGACCTGCAGAGCCTCTGGGAGACTCCTCCCCCAGTAGTAGCAGCACGCCCGCCTCAGGGTGCAGCTCCCCCAATGACAGCGAGCATGGCCCCAACCCTGTCCTGGGCTCCGAGGCGCTCTTGGGCCAGCGGCTGCGGCTGCAGGAGACTTCTCTGGCCCCATTCGCCTTGCCGACAGTGTCCTTGCTGCCCGCAATTACACTGGGACTGCCCGCCCCCGCCAGGGCGGACGGAGACCGCAGGACCCATCCGACTCTGGGCCCTCGGGGTTCAGTCCTGGGGAGCTCCCATACTCCCCTCTTCCTGCCCCATGGTCTGGATCCCGAGGCCGGGGGCACTCTGCCCTCTCGCCTGCAGCCCATTCTCCTCCTGGATCCCTCAGTCTCTCATGCCCCCCTGCTGACTGTGCCCGGGCTTGGGCCCCTGCCCTTCCACTTTGCCCAGTCCTTACTCACCACCGAGCGGCTCTCTGGGTCAGGCCTCCACCGGCCACTGAGCCGGACCCGCTCGGAGCAGCTCGAGCCTCACTTCCAGCTGATCAAGCTTGACGTCACCCCTCCCCAGAGAACAGCCAAGTCAAGTGAGAAGCCCCGGCTACAGCAGATACCCTCGGCTGAGGACCTGGAGACAGATGGCGGGGGAGCCGGCCAGGTGGTAGATGGCAGCCTGGAACACAGGGAGTCGAGCCATAGGCAGCCTGAGGCCAGGGGCCCTGTTCCTCTTCAGCAGCACCAGCAGGTGTTGCTCTGGGAGCGGCAGCGTCTGTCTGGGCGGCTGCCCCGAGGGAGCCCTGGGGACTCTGTGCTGCTCCCCCTGGCCCAGGGCGGACACCGGCTCTTGTCTAGGACTCAGTCCTCCCCTGCTGCACCTGCCTCACTACCAACTCCAGAGCCCACTTGCCAGCCCCGGGTCCTCTCCAGCTCCGAAGCCCCTGCCAAGACCCTGCCCTTTATCACAGGGCTGGTCTATGATTCCGTAATGCTGAAGCACCAGTGCTCCTGCGGAGACAACAGCCGGCACCCGGAGCATGCTGGCCGCATCCAGAGCATCTGGTCCCGGCTGCAAGAGCGAGGCCTCCGGAGCCAGTGTGAGTGTCTCCGGGGCCGGAAGGCCTCCCTAGAGGAGCTTCAGTCAGTCCACTCTGAGCGGCACATGCTTCTATATGGCACCAACCCACTCAGCCGCCTTAAACTGGACAACGAGAAGCTGTCAGAGCTCCTGGCACAGCGGATGTTTGTGATGCTGCCCTGTGGTGGGGTTGGGGTGGATACTGACACCATCTGGAATGAGCTGCATTCTTCCAATGCAGCCCGTTGGGCTGCTGGCAGTGTCACTGACCTCGCCTTCAAAGTGGCTTCCCGAGAGCTCAAGAACGGTTTTGCTGTGGTGCGGCCCCCAGGACACCATGCAGATCATTCCACGGCCATGGGCTTCTGCTTCTTCAACTCGGTAGCCATTGCCTGCCGTCAGCTGCAACAACAAGGCAAGGCCAGCAAGATCCTCATTGTAGACTGGGATGTTCACCATGGCAATGGCACCCAGCAGACCTTCTACCAGGACCCCAGTGTGCTGTACATCTCCCTGCATCGCCACGATGATGGCAACTTCTTCCCCGGCAGTGGGGCTGTGGAAGAGGTCGGAGCTGGCAGTGGTGAGGGCTTCAATGTCAATGTGGCCTGGGCTGGAGGCCTGGAGCCTCCCATGGGGGATCCCGAGTATCTGGCTGCATTCAGGATAGTCGTGATGCCCATCGCCCAAGAATTCTCTCCAGATCTGGTCCTGGTATCAGCTGGGTTTGATGCTGCTGAGGGTCACCCAGCCCCTCTGGGTGGCTACCATGTCTCTGCCAAATGTTTTGGGTACATGACACAGCAGCTGATGAACTTGGCAGGAGGCGCTGTGGTGCTAGCCTTGGAGGGTGGCCATGACCTCACAGCCATCTGCGATGCCTCCGAGGCTTGTGTGGCTGCTCTTTTGGGCAACAAGGTGGATCCCCTTTCAGAAGAAAGCTGGAAACAGAAACCCAACCTCAATGCCATCCGTTCCCTGGAAGCTGTGATCCGGGTGCACAGTAAATATTGGGGCTGCATGCAGCGCCTAGCCTCCTCTCCGAACCTCTGGGTGCCCAGGGTACCAGGGGCTGATGCAGAAGAAGTAGAGGCTGTGACCGCACTGGCATCCCTCTCTGTGGGCATCCTGGCTGAAGATAGGCCCTCAGAGCAACTGGTGGAAGAGGAAGAACCGATGAATCTCTAA
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |