Tag |
Content |
WERAM ID |
WERAM-Aim-0143 |
Ensembl Protein ID |
ENSAMEP00000013629.1 |
Gene Name |
COL2A1 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
1.40e-146 |
487.9 |
522 |
863 |
HDAC |
Class-I |
9.70e-29 |
101 |
541 |
841 |
|
Organism |
Ailuropoda melanoleuca |
Domain Profile |
HDAC Class-II
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles...... 84 +glvyd+ mlkhq+ ++++++hpE+++Riq+i+srlqe+gl++++e+l++rka++eelq+vHse+hv l++t+ +l++ +l++ ENSAMEP00000013629.1 522 TGLVYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHSERHVLLYGTN-PLSRLKLDNgklagl 609 79***********************************************************************.*************** PP class-2.txt 85 .............ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqkl 160 ++vd+d+i++e +s++aar+a+G+v++l++kv++ elkngfavvRPPGHHa++stamGFC+fn+va+a+++lqq+ ENSAMEP00000013629.1 610 laqrmfvmlpcggVGVDTDTIWNELHSSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQG 698 ***************************************************************************************** PP class-2.txt 161 kvkkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafrevvl 246 k++kili+DwDvHhGnGtq++fy+dp vly+SlHR+d+g+ffp gsga+devg g+gegfnvNvaw ggl mgd eylaafr+vv+ ENSAMEP00000013629.1 699 KASKILIMDWDVHHGNGTQQTFYQDPGVLYISLHRHDDGNFFP--GSGAADEVGAGSGEGFNVNVAWAGGLdppMGDPEYLAAFRTVVM 785 *******************************************..******************************************** PP class-2.txt 247 piakeFkPdlvlvsaGfDaaeg..dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322 pia+eF+PdlvlvsaGfDaaeg +plgg++v+akc++++t+ql++lagg vvl+lEGG++l+ai++a+ea+v aLlg ENSAMEP00000013629.1 786 PIAREFSPDLVLVSAGFDAAEGhpAPLGGYHVSAKCFGYMTQQLMSLAGGAVVLALEGGHDLTAICDASEACVAALLG 863 **********************999***************************************************96 PP
HDAC Class-I
class-1.txt 18 qkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyi.....eflkkvepenae.......elskelkkfnvgedc.P 93 ++hp r++ + + + + gl + e ++ +kas eel+++hse ++ + l++ + +n + ++ l +vg d+ ENSAMEP00000013629.1 541 SRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHSERHVllygtNPLSRLKLDNGKlagllaqRMFVMLPCGGVGVDTdT 629 46777777888888888888888888888888888888888888877633333456777777766655443322222233345555423 PP class-1.txt 94 vfdglfey..cqlitGasleaakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellk..khkrvlyididlhhGDgve 176 + ++l++ ++ +G+ + a k+ ++e + a+ G hha +s a Gfc+ n + +a +l++ k +++l +d d+hhG+g + ENSAMEP00000013629.1 630 IWNELHSSnaARWAAGSVTDLAFKVASRELKngFAVVRPPG-HHADHSTAMGFCFFNSVAIACRQLQQqgKASKILIMDWDVHHGNGTQ 717 66777643113445555566777887776551145555544.************************9977899**************** PP class-1.txt 177 eafyttdrvmtvsfhkyge.effPgtGdlsdvgaekgkyyavnvPlkdgid....DesyekifksviskvieafePeavvlqcGaDsla 260 ++fy+ v+ +s+h++++ +ffPg+G ++vga++g + vnv g+d D +y + f++v+ ++ + f+P+ v++ G D+ ENSAMEP00000013629.1 718 QTFYQDPGVLYISLHRHDDgNFFPGSGAADEVGAGSGEGFNVNVAWAGGLDppmgDPEYLAAFRTVVMPIAREFSPDLVLVSAGFDAAE 806 *****************8746***********************9888876555599******************************99 PP class-1.txt 261 gD..rlgefnlsikghaecvkfvksf..nlpllvl 291 g +lg +++s k ++ + + + s + +l l ENSAMEP00000013629.1 807 GHpaPLGGYHVSAKCFGYMTQQLMSLagGAVVLAL 841 8633699****999999988877777433333334 PP
|
Protein Sequence (Fasta) | QLQVGQQERE LRQLLNKDKS KRSAVASSVV KQKLAEVILK KQQAALERTV HPNSPSIPYR 60 TLEPLETEGA ARSMLSSFLP PVPSLPSDPP EHFPLRKTVS EPNLKLRYKP KKSLERRKNP 120 LLRKESAPPS LRRRPAETLG DSSPSSSSTP ASGCSSPNDS EQGPNPVLGS EPLPCSPWQA 180 LLGQRLRLQE TSLAPFALPT VSLLPAITLG LPAPARPTSP QADADRRTHP TLGPRGPVLG 240 SPHAPLFLPH GLEPEAGGPL PSRLQPILLL DPSVSHAPLL TGEFHGFSRG GAWSLHPAKG 300 QVRLHRPLSR TRSEPLPPSA TAPPPLGPLQ PRLERLKPHV QLIKPASQHG LSVGVSPPQR 360 PAKPSEKPRL RQIPSAEDLE TDGGGVGPVG DDGLEHRESS HGQHEARGPV PLQQHQVRRH 420 PRSWFPSPWA ATDGAESRDL ETEAPCVPQV FLWEQQRLAG RLPRGGTGDS VLLPLAQGSH 480 RPLSRAQSSP AAPASLPTPE PASQARVLPS SETPARTLPF TTGLVYDSVM LKHQCSCGDN 540 SRHPEHAGRI QSIWSRLQER GLRSQCECLR GRKASLEELQ SVHSERHVLL YGTNPLSRLK 600 LDNGKLAGLL AQRMFVMLPC GGVGVDTDTI WNELHSSNAA RWAAGSVTDL AFKVASRELK 660 NGFAVVRPPG HHADHSTAMG FCFFNSVAIA CRQLQQQGKA SKILIMDWDV HHGNGTQQTF 720 YQDPGVLYIS LHRHDDGNFF PGSGAADEVG AGSGEGFNVN VAWAGGLDPP MGDPEYLAAF 780 RTVVMPIARE FSPDLVLVSA GFDAAEGHPA PLGGYHVSAK CFGYMTQQLM SLAGGAVVLA 840 LEGGHDLTAI CDASEACVAA LLGNKVDPLS EEGWKQKPNL NAIRSLEAVI RVHSKYWGCM 900 QRLASRPDSW APRAPGADTE EVEAVTALAS LSVGILAEER PSEQLVEEEE PM 952Protein Fasta Sequence
>ENSAMEP00000013629.1|Class-I|Ailuropoda melanoleuca QLQVGQQERELRQLLNKDKSKRSAVASSVVKQKLAEVILKKQQAALERTVHPNSPSIPYRTLEPLETEGAARSMLSSFLPPVPSLPSDPPEHFPLRKTVSEPNLKLRYKPKKSLERRKNPLLRKESAPPSLRRRPAETLGDSSPSSSSTPASGCSSPNDSEQGPNPVLGSEPLPCSPWQALLGQRLRLQETSLAPFALPTVSLLPAITLGLPAPARPTSPQADADRRTHPTLGPRGPVLGSPHAPLFLPHGLEPEAGGPLPSRLQPILLLDPSVSHAPLLTGEFHGFSRGGAWSLHPAKGQVRLHRPLSRTRSEPLPPSATAPPPLGPLQPRLERLKPHVQLIKPASQHGLSVGVSPPQRPAKPSEKPRLRQIPSAEDLETDGGGVGPVGDDGLEHRESSHGQHEARGPVPLQQHQVRRHPRSWFPSPWAATDGAESRDLETEAPCVPQVFLWEQQRLAGRLPRGGTGDSVLLPLAQGSHRPLSRAQSSPAAPASLPTPEPASQARVLPSSETPARTLPFTTGLVYDSVMLKHQCSCGDNSRHPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNELHSSNAARWAAGSVTDLAFKVASRELKNGFAVVRPPGHHADHSTAMGFCFFNSVAIACRQLQQQGKASKILIMDWDVHHGNGTQQTFYQDPGVLYISLHRHDDGNFFPGSGAADEVGAGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRTVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVSAKCFGYMTQQLMSLAGGAVVLALEGGHDLTAICDASEACVAALLGNKVDPLSEEGWKQKPNLNAIRSLEAVIRVHSKYWGCMQRLASRPDSWAPRAPGADTEEVEAVTALASLSVGILAEERPSEQLVEEEEPM
|
Nucleotide Sequence (Fasta) | CAGCTGCAGG TGGGGCAGCA GGAGCGGGAG CTGCGGCAGC TTCTCAACAA GGACAAGAGC 60 AAGCGAAGTG CCGTAGCCAG CAGCGTGGTC AAGCAGAAGC TGGCAGAGGT GATTCTAAAG 120 AAACAGCAGG CAGCCCTAGA GAGAACAGTC CACCCCAATA GCCCCAGCAT TCCCTACAGA 180 ACCCTCGAGC CCTTGGAGAC GGAAGGAGCT GCTCGCTCTA TGCTCAGCAG CTTTCTGCCT 240 CCTGTTCCCA GCCTGCCCAG TGACCCCCCA GAACACTTCC CTCTCCGAAA GACAGTCTCT 300 GAGCCCAACC TGAAGCTGCG TTACAAGCCC AAGAAGTCCC TGGAGCGGAG GAAGAATCCG 360 CTGCTCAGAA AGGAGAGCGC CCCGCCCAGT CTCCGGCGGC GGCCCGCGGA GACCCTTGGT 420 GACTCCTCCC CGAGTAGCAG CAGCACGCCA GCCTCGGGCT GCAGTTCCCC TAATGACAGC 480 GAGCAGGGCC CCAACCCCGT CCTGGGCTCC GAGCCCCTGC CCTGCTCCCC ATGGCAGGCG 540 CTCTTGGGCC AGCGGCTGCG GCTGCAGGAG ACCTCTCTGG CCCCGTTCGC CTTGCCGACT 600 GTGTCCTTGC TGCCCGCAAT CACGCTGGGG CTACCTGCCC CTGCCAGGCC TACCTCTCCC 660 CAGGCTGATG CTGACCGCAG GACCCATCCG ACTCTGGGCC CTCGGGGGCC GGTCCTGGGG 720 AGCCCCCATG CTCCCCTCTT CCTGCCCCAT GGCCTGGAGC CTGAGGCTGG AGGCCCCTTG 780 CCCTCTCGAC TACAGCCCAT CCTCCTCTTG GATCCCTCAG TTTCTCACGC CCCTCTGCTG 840 ACTGGTGAGT TCCACGGTTT CTCCAGGGGA GGGGCTTGGT CCCTGCATCC TGCTAAGGGC 900 CAAGTTCGGC TCCACCGGCC ACTAAGCCGG ACCCGCTCAG AGCCCCTGCC CCCAAGCGCC 960 ACCGCCCCCC CACCGCTGGG CCCCCTGCAG CCCCGCCTGG AACGGCTCAA ACCTCACGTC 1020 CAGCTGATCA AGCCTGCCTC CCAGCATGGC CTCTCAGTGG GCGTCTCCCC TCCCCAGAGG 1080 CCAGCCAAGC CAAGTGAGAA GCCCCGACTG CGGCAGATAC CCTCCGCTGA GGACCTAGAG 1140 ACAGATGGCG GGGGTGTGGG GCCAGTGGGG GATGACGGCC TGGAACACAG GGAGTCAAGC 1200 CACGGGCAGC ATGAGGCCAG AGGCCCTGTT CCTCTCCAGC AGCACCAGGT ACGGCGGCAC 1260 CCACGTTCCT GGTTTCCAAG TCCTTGGGCA GCAACAGATG GAGCAGAATC CCGAGACCTG 1320 GAGACTGAGG CCCCCTGTGT CCCTCAGGTG TTCCTCTGGG AGCAGCAGCG ACTGGCTGGG 1380 CGGCTCCCCC GGGGAGGAAC TGGGGACTCT GTGCTGCTTC CCCTGGCCCA GGGCAGTCAC 1440 CGGCCCCTAT CCAGGGCTCA GTCGTCCCCA GCCGCACCTG CCTCACTGCC AACTCCAGAG 1500 CCCGCCAGTC AGGCCCGTGT CCTGCCCAGC TCGGAGACCC CTGCCAGGAC CCTGCCATTC 1560 ACCACAGGGC TGGTCTATGA CTCGGTCATG CTGAAGCACC AGTGCTCCTG CGGGGACAAC 1620 AGCCGGCACC CCGAGCACGC GGGCCGCATC CAGAGCATCT GGTCCCGGCT GCAGGAGCGG 1680 GGGCTCCGGA GCCAGTGTGA GTGTCTCCGG GGCCGGAAGG CCTCCCTGGA GGAGCTGCAG 1740 TCCGTGCACT CCGAGCGGCA TGTGCTCCTC TATGGCACCA ACCCGCTCAG CCGCCTCAAA 1800 CTGGACAACG GGAAGCTGGC AGGGCTCCTG GCACAGCGGA TGTTTGTGAT GCTGCCCTGT 1860 GGTGGGGTAG GGGTGGATAC CGACACCATC TGGAACGAGC TGCACTCCTC CAATGCAGCC 1920 CGCTGGGCCG CCGGCAGCGT CACCGACCTC GCCTTCAAAG TAGCTTCCCG TGAGCTAAAG 1980 AATGGTTTTG CTGTGGTTCG GCCCCCAGGA CACCATGCAG ACCATTCCAC AGCCATGGGC 2040 TTCTGCTTCT TCAACTCGGT GGCCATCGCC TGCCGGCAGC TTCAACAGCA GGGCAAGGCC 2100 AGCAAGATCC TCATCATGGA CTGGGATGTT CACCACGGCA ACGGCACCCA GCAGACCTTC 2160 TACCAGGACC CCGGTGTGCT GTACATCTCC CTGCATCGCC ACGACGACGG CAACTTCTTC 2220 CCCGGCAGTG GGGCCGCGGA TGAGGTGGGA GCTGGTAGCG GTGAGGGTTT CAACGTCAAC 2280 GTGGCCTGGG CGGGAGGTCT GGACCCTCCG ATGGGGGATC CTGAGTACCT GGCCGCCTTC 2340 AGGACGGTCG TGATGCCCAT CGCCAGAGAG TTCTCTCCGG ACCTGGTCCT GGTGTCAGCT 2400 GGGTTTGATG CTGCCGAGGG TCACCCAGCC CCGCTGGGTG GCTACCATGT TTCCGCTAAA 2460 TGTTTCGGGT ACATGACGCA GCAGCTGATG AGCTTGGCGG GAGGTGCCGT GGTGCTGGCC 2520 TTGGAAGGTG GCCATGACCT CACAGCCATC TGTGACGCTT CTGAGGCCTG CGTGGCTGCT 2580 CTTCTGGGGA ACAAGGTGGA CCCTCTCTCA GAAGAGGGCT GGAAACAGAA ACCCAACCTC 2640 AACGCCATCC GCTCTTTGGA AGCCGTGATC CGGGTGCACA GTAAATACTG GGGCTGCATG 2700 CAGCGCCTGG CTTCCCGTCC AGACTCCTGG GCGCCCAGGG CGCCAGGCGC CGACACGGAA 2760 GAAGTGGAGG CGGTGACGGC GTTGGCATCC CTCTCCGTGG GCATCCTGGC TGAAGAGCGG 2820 CCCTCGGAAC AGCTGGTGGA GGAGGAAGAA CCCATG
2857Nucleotide Fasta Sequence
>ENSAMEP00000013629.1|Class-I|Ailuropoda melanoleuca CAGCTGCAGGTGGGGCAGCAGGAGCGGGAGCTGCGGCAGCTTCTCAACAAGGACAAGAGCAAGCGAAGTGCCGTAGCCAGCAGCGTGGTCAAGCAGAAGCTGGCAGAGGTGATTCTAAAGAAACAGCAGGCAGCCCTAGAGAGAACAGTCCACCCCAATAGCCCCAGCATTCCCTACAGAACCCTCGAGCCCTTGGAGACGGAAGGAGCTGCTCGCTCTATGCTCAGCAGCTTTCTGCCTCCTGTTCCCAGCCTGCCCAGTGACCCCCCAGAACACTTCCCTCTCCGAAAGACAGTCTCTGAGCCCAACCTGAAGCTGCGTTACAAGCCCAAGAAGTCCCTGGAGCGGAGGAAGAATCCGCTGCTCAGAAAGGAGAGCGCCCCGCCCAGTCTCCGGCGGCGGCCCGCGGAGACCCTTGGTGACTCCTCCCCGAGTAGCAGCAGCACGCCAGCCTCGGGCTGCAGTTCCCCTAATGACAGCGAGCAGGGCCCCAACCCCGTCCTGGGCTCCGAGCCCCTGCCCTGCTCCCCATGGCAGGCGCTCTTGGGCCAGCGGCTGCGGCTGCAGGAGACCTCTCTGGCCCCGTTCGCCTTGCCGACTGTGTCCTTGCTGCCCGCAATCACGCTGGGGCTACCTGCCCCTGCCAGGCCTACCTCTCCCCAGGCTGATGCTGACCGCAGGACCCATCCGACTCTGGGCCCTCGGGGGCCGGTCCTGGGGAGCCCCCATGCTCCCCTCTTCCTGCCCCATGGCCTGGAGCCTGAGGCTGGAGGCCCCTTGCCCTCTCGACTACAGCCCATCCTCCTCTTGGATCCCTCAGTTTCTCACGCCCCTCTGCTGACTGGTGAGTTCCACGGTTTCTCCAGGGGAGGGGCTTGGTCCCTGCATCCTGCTAAGGGCCAAGTTCGGCTCCACCGGCCACTAAGCCGGACCCGCTCAGAGCCCCTGCCCCCAAGCGCCACCGCCCCCCCACCGCTGGGCCCCCTGCAGCCCCGCCTGGAACGGCTCAAACCTCACGTCCAGCTGATCAAGCCTGCCTCCCAGCATGGCCTCTCAGTGGGCGTCTCCCCTCCCCAGAGGCCAGCCAAGCCAAGTGAGAAGCCCCGACTGCGGCAGATACCCTCCGCTGAGGACCTAGAGACAGATGGCGGGGGTGTGGGGCCAGTGGGGGATGACGGCCTGGAACACAGGGAGTCAAGCCACGGGCAGCATGAGGCCAGAGGCCCTGTTCCTCTCCAGCAGCACCAGGTACGGCGGCACCCACGTTCCTGGTTTCCAAGTCCTTGGGCAGCAACAGATGGAGCAGAATCCCGAGACCTGGAGACTGAGGCCCCCTGTGTCCCTCAGGTGTTCCTCTGGGAGCAGCAGCGACTGGCTGGGCGGCTCCCCCGGGGAGGAACTGGGGACTCTGTGCTGCTTCCCCTGGCCCAGGGCAGTCACCGGCCCCTATCCAGGGCTCAGTCGTCCCCAGCCGCACCTGCCTCACTGCCAACTCCAGAGCCCGCCAGTCAGGCCCGTGTCCTGCCCAGCTCGGAGACCCCTGCCAGGACCCTGCCATTCACCACAGGGCTGGTCTATGACTCGGTCATGCTGAAGCACCAGTGCTCCTGCGGGGACAACAGCCGGCACCCCGAGCACGCGGGCCGCATCCAGAGCATCTGGTCCCGGCTGCAGGAGCGGGGGCTCCGGAGCCAGTGTGAGTGTCTCCGGGGCCGGAAGGCCTCCCTGGAGGAGCTGCAGTCCGTGCACTCCGAGCGGCATGTGCTCCTCTATGGCACCAACCCGCTCAGCCGCCTCAAACTGGACAACGGGAAGCTGGCAGGGCTCCTGGCACAGCGGATGTTTGTGATGCTGCCCTGTGGTGGGGTAGGGGTGGATACCGACACCATCTGGAACGAGCTGCACTCCTCCAATGCAGCCCGCTGGGCCGCCGGCAGCGTCACCGACCTCGCCTTCAAAGTAGCTTCCCGTGAGCTAAAGAATGGTTTTGCTGTGGTTCGGCCCCCAGGACACCATGCAGACCATTCCACAGCCATGGGCTTCTGCTTCTTCAACTCGGTGGCCATCGCCTGCCGGCAGCTTCAACAGCAGGGCAAGGCCAGCAAGATCCTCATCATGGACTGGGATGTTCACCACGGCAACGGCACCCAGCAGACCTTCTACCAGGACCCCGGTGTGCTGTACATCTCCCTGCATCGCCACGACGACGGCAACTTCTTCCCCGGCAGTGGGGCCGCGGATGAGGTGGGAGCTGGTAGCGGTGAGGGTTTCAACGTCAACGTGGCCTGGGCGGGAGGTCTGGACCCTCCGATGGGGGATCCTGAGTACCTGGCCGCCTTCAGGACGGTCGTGATGCCCATCGCCAGAGAGTTCTCTCCGGACCTGGTCCTGGTGTCAGCTGGGTTTGATGCTGCCGAGGGTCACCCAGCCCCGCTGGGTGGCTACCATGTTTCCGCTAAATGTTTCGGGTACATGACGCAGCAGCTGATGAGCTTGGCGGGAGGTGCCGTGGTGCTGGCCTTGGAAGGTGGCCATGACCTCACAGCCATCTGTGACGCTTCTGAGGCCTGCGTGGCTGCTCTTCTGGGGAACAAGGTGGACCCTCTCTCAGAAGAGGGCTGGAAACAGAAACCCAACCTCAACGCCATCCGCTCTTTGGAAGCCGTGATCCGGGTGCACAGTAAATACTGGGGCTGCATGCAGCGCCTGGCTTCCCGTCCAGACTCCTGGGCGCCCAGGGCGCCAGGCGCCGACACGGAAGAAGTGGAGGCGGTGACGGCGTTGGCATCCCTCTCCGTGGGCATCCTGGCTGAAGAGCGGCCCTCGGAACAGCTGGTGGAGGAGGAAGAACCCATG
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |