WERAM Information


Tag Content
WERAM ID WERAM-Xim-0225
Ensembl Protein ID ENSXMAP00000018758.1
Gene Name hdac7b
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSXMAG00000018719.1 ENSXMAT00000018786.1 ENSXMAP00000018758.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 1.60e-138 461.3 510 837
HDAC Class-I 4.30e-34 118.5 528 800
Organism Xiphophorus maculatus
Domain Profile
  HDAC Class-II

           class-2.txt   2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles....lt 86 
+glvyd++m khq++++++++h E+++Riq+i+srlqe+gl +++e++ +rkat+ el++vHse+hv + +++++ ++ ++ ++
ENSXMAP00000018758.1 510 TGLVYDTQMQKHQCICGDNSRHAEHAGRIQSIWSRLQERGLKSQCECILSRKATRAELLSVHSENHVLMDNQKRTGSRIFVDLpcggVG 598
79****************************************************************987766655555555559999** PP
class-2.txt 87 vdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkilivDwDvHhG 175
vd d++++e+++++a+++a+G+v++l+ kv++ +lkngfavvRPPGHHa++s++ GFC+fn+va+aak+lq+kl+v+kilivDwDvHhG
ENSXMAP00000018758.1 599 VDIDTVWNEQHTAAASQVAAGCVIDLALKVAQRQLKNGFAVVRPPGHHATRSSPLGFCYFNSVAIAAKQLQHKLSVSKILIVDWDVHHG 687
***************************************************************************************** PP
class-2.txt 176 nGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafrevvlpiakeFkPdlvlvsa 261
nGtqe+fy+dp+vly+SlHRyd+g+ffp gsg+++evg g+g+gfnvNv w+ggl mgdaeylaafr vv+pia+eF+Pd+vlvsa
ENSXMAP00000018758.1 688 NGTQEAFYDDPSVLYISLHRYDDGNFFP--GSGHPNEVGVGAGKGFNVNVGWTGGLeppMGDAEYLAAFRAVVMPIAHEFSPDVVLVSA 774
****************************..*********************************************************** PP
class-2.txt 262 GfDaaeg..dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322
GfDa+eg +lgg++vtak ++ lt+ql++laggrv+l+lEGG++lkai++a+ea+v+aLlg
ENSXMAP00000018758.1 775 GFDAVEGhqPSLGGYTVTAKLFGFLTRQLMSLAGGRVILALEGGHDLKAICDASEACVSALLG 837
*******9888**************************************************96 PP

  HDAC Class-I

           class-1.txt  17 gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfd.glfeycql 104
+++h+ r++ + + + + gl+ + e + ++ka+++ell++hse+++ + ++ ++ + + +v+ d+ + + +q+
ENSXMAP00000018758.1 528 NSRHAEHAGRIQSIWSRLQERGLKSQCECILSRKATRAELLSVHSENHVLMDNQKRTGSRIFVDLPCGGVGVDIDTVWNEqHTAAASQV 616
345666777899999999999**************************985544433333333333555566666655444145567899 PP
class-1.txt 105 itGasleaakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellk..khkrvlyididlhhGDgveeafyttdrvmtvs 189
+G ++ a k+ +++ + a+ G hha +s+ Gfcy n + +a +l++ + +++l +d d+hhG+g +eafy v+ +s
ENSXMAP00000018758.1 617 AAGCVIDLALKVAQRQLKngFAVVRPPG-HHATRSSPLGFCYFNSVAIAAKQLQHklSVSKILIVDWDVHHGNGTQEAFYDDPSVLYIS 704
9***********9988762245555555.************************9845568***************************** PP
class-1.txt 190 fhkyge.effPgtGdlsdvgaekgkyyavnvPlkdg....idDesyekifksviskvieafePeavvlqcGaDslagDr..lgefnlsi 271
+h+y++ +ffPg+G+ ++vg++ gk + vnv + g + D +y + f+ v+ ++ + f+P++v++ G D++ g + lg + ++
ENSXMAP00000018758.1 705 LHRYDDgNFFPGSGHPNEVGVGAGKGFNVNVGWTGGleppMGDAEYLAAFRAVVMPIAHEFSPDVVLVSAGFDAVEGHQpsLGGYTVTA 793
****9746***********************87666222267********************************987643388888887 PP
class-1.txt 272 kghaecv 278
k ++
ENSXMAP00000018758.1 794 KLFGFLT 800
7666555 PP

Protein Sequence
(Fasta)
MDLTVTHRLL HPRPDSAMLA PQPSFYLEHL TAQHCSQFSQ HHLQYNTEQR RRKMEEKRED 60
PQQLLPKNKN EQSAVASKHV KQILRDHIIM KNQPPHDRVP GSHCSTSPGY RPPMPDMSLK 120
PQPTPCDQRK DLALRRTVSE PTLKWKLKKL ISTRPNPLQR KISAPPDVKH RTENMDSSPS 180
RSTTSASGCS SPNDTLMSDN GSLPRAPESK RVLMNNGNVA HFALPANHTA KHNITAGLPA 240
QADLRVTKPV AASTLQSLYL PLEVPSISQR LQPVFIFEPH MGLMRQQLVP LHSLSTIPQQ 300
QHPHISSSSR REGLVALGSH RPVERAHSEP LPYSHSVLPL HAGHHPHAHQ QLSQLYHKAG 360
LERFKLSTQL SKIPSEDMDV DESGSASGSG TGSLCGSELG SLSEDGHRRR ESNASTDSVY 420
DTESITSSRE SLIETSHSLS QRQVILRSTL QPDALGVPTL IWPHQSHPPV IRSRSLPPST 480
SLAPSSHVPT IIPSMSLSSP AKDAKLRFTT GLVYDTQMQK HQCICGDNSR HAEHAGRIQS 540
IWSRLQERGL KSQCECILSR KATRAELLSV HSENHVLMDN QKRTGSRIFV DLPCGGVGVD 600
IDTVWNEQHT AAASQVAAGC VIDLALKVAQ RQLKNGFAVV RPPGHHATRS SPLGFCYFNS 660
VAIAAKQLQH KLSVSKILIV DWDVHHGNGT QEAFYDDPSV LYISLHRYDD GNFFPGSGHP 720
NEVGVGAGKG FNVNVGWTGG LEPPMGDAEY LAAFRAVVMP IAHEFSPDVV LVSAGFDAVE 780
GHQPSLGGYT VTAKLFGFLT RQLMSLAGGR VILALEGGHD LKAICDASEA CVSALLGMEV 840
EPLSQSLLDQ KPCENAVRSL QRVVQIQGEF WQSVRDSATT VDLSYLQAQR HRFRRDSDSE 900
AVNAIASLSM GSLTSERKPL ERM 923
Nucleotide Sequence
(Fasta)
TGGATGTGAT CCTCAGCAGT CACATTTGGC CATTCGAAGG GTCAAGCCCA TGGATCTGAC 60
TGTAACTCAC AGGCTGTTAC ATCCACGTCC AGATTCGGCC ATGCTGGCTC CACAGCCTTC 120
ATTCTATCTG GAACATCTCA CTGCTCAACA TTGCTCTCAG TTTTCCCAGC ACCACTTGCA 180
GTATAACACT GAACAAAGAC GCAGAAAGAT GGAGGAGAAA AGAGAAGACC CACAGCAGCT 240
GTTACCAAAG AATAAAAACG AACAGAGTGC TGTAGCTAGC AAACATGTAA AGCAAATTCT 300
GCGTGATCAT ATAATTATGA AGAACCAGCC TCCTCATGAT AGGGTTCCTG GCAGCCACTG 360
CAGTACCTCT CCGGGATACA GGCCACCCAT GCCTGACATG TCCCTCAAGC CTCAACCTAC 420
ACCCTGTGAC CAGCGAAAGG ACCTCGCCCT GCGAAGAACA GTATCTGAGC CCACACTGAA 480
GTGGAAGTTG AAGAAACTCA TCTCCACAAG GCCTAACCCG CTGCAACGAA AGATCAGTGC 540
CCCTCCTGAT GTCAAACATA GGACAGAAAA TATGGACTCT TCCCCAAGCA GAAGCACCAC 600
TTCAGCATCA GGCTGCAGCT CACCAAACGA CACCCTCATG TCAGACAATG GGTCCCTCCC 660
ACGGGCTCCT GAGTCAAAGA GGGTGCTGAT GAACAATGGT AATGTAGCCC ACTTTGCTCT 720
GCCTGCCAAC CACACTGCAA AGCACAACAT CACTGCTGGA CTTCCTGCTC AGGCTGACTT 780
GCGTGTAACA AAGCCAGTGG CAGCATCGAC TTTGCAGTCT CTCTACCTCC CTCTGGAGGT 840
CCCATCTATA TCTCAACGCT TGCAGCCAGT GTTCATATTT GAACCACACA TGGGGCTGAT 900
GCGCCAGCAG CTTGTTCCTC TTCATAGTTT GAGTACCATT CCTCAGCAAC AGCATCCTCA 960
CATATCCTCC TCGTCCAGAA GAGAAGGCTT AGTTGCCTTG GGTTCACATC GACCTGTGGA 1020
GCGAGCGCAT TCAGAGCCTC TGCCTTACAG CCACTCAGTC CTGCCCCTGC ATGCCGGCCA 1080
TCATCCACAC GCCCACCAAC AGCTATCCCA GCTGTACCAC AAAGCTGGAT TGGAAAGGTT 1140
TAAGCTGAGC ACACAGCTGA GCAAGATCCC GTCTGAAGAC ATGGACGTGG ATGAGAGCGG 1200
ATCAGCATCA GGTTCTGGAA CAGGGTCTTT GTGCGGCTCA GAACTGGGTT CCCTGTCTGA 1260
AGACGGCCAC CGCCGGAGAG AAAGTAATGC CAGCACCGAT TCAGTTTATG ACACAGAGTC 1320
CATCACTTCC TCTCGGGAGA GCTTGATTGA GACATCACAC TCTCTCAGTC AGAGGCAGGT 1380
AATCCTCAGA TCAACTTTAC AGCCAGATGC GCTGGGAGTT CCTACCTTAA TCTGGCCTCA 1440
TCAGTCTCAT CCGCCTGTGA TTCGGAGCCG CTCTCTACCA CCTTCCACCT CCCTGGCGCC 1500
TTCTTCACAT GTACCCACCA TAATACCCTC TATGTCACTA TCCAGCCCTG CCAAAGATGC 1560
CAAGCTACGA TTTACAACAG GTTTGGTTTA CGATACTCAG ATGCAGAAGC ACCAGTGTAT 1620
CTGTGGAGAC AACAGCCGCC ATGCTGAGCA TGCTGGGAGA ATCCAGAGCA TCTGGTCTAG 1680
ACTGCAAGAG AGAGGGCTTA AGAGTCAATG TGAGTGCATC CTCAGTAGAA AAGCCACCCG 1740
TGCAGAGCTG CTTTCCGTCC ATTCAGAAAA CCACGTGTTA ATGGACAATC AGAAGCGCAC 1800
GGGATCACGT ATTTTTGTGG ACCTACCATG TGGAGGTGTG GGGGTGGACA TTGATACAGT 1860
TTGGAATGAG CAACATACAG CAGCTGCTTC CCAAGTAGCA GCAGGATGTG TCATAGACCT 1920
GGCCCTTAAG GTGGCACAGA GACAGCTGAA GAATGGATTT GCAGTGGTGA GACCTCCCGG 1980
ACACCACGCA ACTCGTTCTT CTCCTCTGGG CTTCTGTTAC TTCAACTCTG TGGCCATCGC 2040
AGCCAAGCAG CTCCAACACA AACTCAGTGT CAGCAAGATC CTCATAGTAG ATTGGGATGT 2100
GCACCATGGC AATGGCACCC AAGAGGCCTT CTATGATGAC CCGAGTGTTC TGTATATCTC 2160
TCTGCATCGC TATGATGATG GGAACTTCTT TCCTGGTAGT GGACATCCAA ATGAGGTGGG 2220
TGTAGGAGCG GGTAAAGGCT TCAATGTCAA TGTGGGATGG ACTGGTGGTC TGGAGCCTCC 2280
AATGGGTGAT GCAGAGTACT TGGCTGCATT CAGGGCTGTA GTGATGCCTA TTGCCCACGA 2340
GTTTTCCCCA GATGTGGTCT TGGTCTCCGC CGGCTTCGAT GCTGTTGAAG GACACCAACC 2400
TTCATTGGGG GGATACACCG TCACAGCCAA GCTTTTTGGC TTCTTGACTC GTCAGCTGAT 2460
GTCGCTGGCA GGAGGCCGGG TCATCCTCGC TCTGGAGGGG GGCCATGACC TCAAAGCCAT 2520
CTGTGATGCC TCTGAAGCCT GTGTCAGCGC CTTGCTCGGC ATGGAGGTGG AGCCTCTGTC 2580
CCAGTCACTG TTGGACCAAA AGCCCTGTGA GAATGCGGTG CGCTCTCTGC AGAGAGTCGT 2640
CCAGATCCAG GGTGAGTTCT GGCAAAGTGT GAGAGATTCA GCCACGACTG TGGATCTGTC 2700
CTACCTGCAG GCACAGAGAC ACAGATTCAG GCGAGACTCG GACAGTGAGG CGGTCAATGC 2760
CATCGCCTCC CTGTCAATGG GGTCCCTCAC TTCAGAAAGG AAACCACTTG AAAGAATGTG 2820
A 2822
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Pof-0015 ENSPFOP00000001511.2 Poecilia formosa 97 0.0 1617
WERAM-Orn-0227 ENSONIP00000024390.1 Oreochromis niloticus 71 0.0 1139
WERAM-Gaa-0079 ENSGACP00000010554.1 Gasterosteus aculeatus 64 0.0 1052
WERAM-Orla-0178 ENSORLP00000020522.1 Oryzias latipes 62 0.0 1045
WERAM-Tar-0132 ENSTRUP00000028721.1 Takifugu rubripes 62 0.0 1026
WERAM-Ten-0061 ENSTNIP00000000291.1 Tetraodon nigroviridis 51 0.0 702
WERAM-Leo-0044 ENSLOCP00000006280.1 Lepisosteus oculatus 48 0.0 688
WERAM-Anc-0160 ENSACAP00000015012.3 Anolis carolinensis 46 0.0 682
WERAM-Pes-0124 ENSPSIP00000014863.1 Pelodiscus sinensis 45 0.0 679
WERAM-Gaga-0067 ENSGALP00000010190.4 Gallus gallus 44 0.0 668
WERAM-Lac-0191 ENSLACP00000021749.1 Latimeria chalumnae 46 0.0 638
WERAM-Myl-0159 ENSMLUP00000013297.2 Myotis lucifugus 65 2e-172 604
WERAM-Dar-0198 ENSDARP00000131327.1 Danio rerio 67 3e-171 600
WERAM-Bot-0159 ENSBTAP00000023621.5 Bos taurus 65 5e-171 599
WERAM-Loa-0107 ENSLAFP00000009167.2 Loxodonta africana 65 1e-170 598
WERAM-Meg-0023 ENSMGAP00000001752.2 Meleagris gallopavo 65 2e-170 597
WERAM-Anp-0035 ENSAPLP00000004005.1 Anas platyrhynchos 64 2e-170 597
WERAM-Ict-0095 ENSSTOP00000009983.2 Ictidomys tridecemlineatus 65 2e-170 597
WERAM-Fec-0140 ENSFCAP00000013207.3 Felis catus 64 3e-170 596
WERAM-Pat-0104 ENSPTRP00000022412.3 Pan troglodytes 65 3e-170 596
WERAM-Xet-0073 ENSXETP00000023344.3 Xenopus tropicalis 67 4e-170 596
WERAM-Sus-0169 ENSSSCP00000025173.1 Sus scrofa 65 4e-170 596
WERAM-Hos-0025 ENSP00000264606.3 Homo sapiens 65 4e-170 596
WERAM-Mup-0001 ENSMPUP00000000123.1 Mustela putorius furo 65 4e-170 596
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 64 4e-170 596
WERAM-Chs-0068 ENSCSAP00000002314.1 Chlorocebus sabaeus 65 6e-170 595
WERAM-Cap-0143 ENSCPOP00000011770.2 Cavia porcellus 64 8e-170 595
WERAM-Tag-0050 ENSTGUP00000003338.1 Taeniopygia guttata 64 9e-170 595
WERAM-Fia-0056 ENSFALP00000004005.1 Ficedula albicollis 64 2e-169 593
WERAM-Aim-0131 ENSAMEP00000011965.1 Ailuropoda melanoleuca 65 2e-169 593
WERAM-Ran-0135 ENSRNOP00000027622.5 Rattus norvegicus 65 3e-169 593
WERAM-Paa-0012 ENSPANP00000003104.1 Papio anubis 65 5e-169 592
WERAM-Mum-0077 ENSMUSP00000008995.8 Mus musculus 65 6e-169 592
WERAM-Caj-0101 ENSCJAP00000017313.2 Callithrix jacchus 65 2e-168 590
WERAM-Otg-0061 ENSOGAP00000004404.2 Otolemur garnettii 64 9e-168 588
WERAM-Gog-0157 ENSGGOP00000013985.2 Gorilla gorilla 64 3e-167 586
WERAM-Tut-0038 ENSTTRP00000002947.1 Tursiops truncatus 65 9e-166 581
WERAM-Sah-0025 ENSSHAP00000002837.1 Sarcophilus harrisii 64 2e-165 580
WERAM-Asm-0202 ENSAMXP00000018862.1 Astyanax mexicanus 64 3e-165 580
WERAM-Pem-0041 ENSPMAP00000005402.1 Petromyzon marinus 65 5e-165 579
WERAM-Caf-0101 ENSCAFP00000013479.3 Canis familiaris 65 2e-164 577
WERAM-Ova-0200 ENSOARP00000020106.1 Ovis aries 63 2e-164 577
WERAM-Eqc-0166 ENSECAP00000018277.1 Equus caballus 65 6e-164 575
WERAM-Nol-0194 ENSNLEP00000021748.1 Nomascus leucogenys 63 4e-163 573
WERAM-Prc-0083 ENSPCAP00000007167.1 Procavia capensis 63 4e-162 569
WERAM-Dan-0112 ENSDNOP00000014271.3 Dasypus novemcinctus 65 2e-161 567
WERAM-Ptv-0156 ENSPVAP00000012934.1 Pteropus vampyrus 63 9e-161 565
WERAM-Gam-0063 ENSGMOP00000006368.1 Gadus morhua 63 8e-159 558
WERAM-Mam-0226 ENSMMUP00000028518.2 Macaca mulatta 67 3e-157 553
WERAM-Mae-0085 ENSMEUP00000008564.1 Macropus eugenii 62 8e-157 551
WERAM-Orc-0142 ENSOCUP00000012429.3 Oryctolagus cuniculus 62 2e-156 550
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 60 9e-156 548
WERAM-Poa-0162 ENSPPYP00000019901.2 Pongo abelii 61 3e-155 546
WERAM-Dio-0163 ENSDORP00000015416.1 Dipodomys ordii 63 6e-155 545
WERAM-Mod-0095 ENSMODP00000032765.2 Monodelphis domestica 62 9e-155 545
WERAM-Ocp-0087 ENSOPRP00000007869.2 Ochotona princeps 62 1e-154 544
WERAM-Ere-0042 ENSEEUP00000003697.1 Erinaceus europaeus 67 9e-150 528
WERAM-Mim-0022 ENSMICP00000002393.1 Microcebus murinus 61 2e-145 514
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 56 2e-144 510
WERAM-Soa-0055 ENSSARP00000005400.1 Sorex araneus 58 1e-139 495
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 61 5e-134 476
WERAM-Ect-0082 ENSETEP00000009275.1 Echinops telfairi 52 1e-121 435
WERAM-Cii-0046 ENSCINP00000016829.3 Ciona intestinalis 51 2e-118 424
WERAM-Tub-0137 ENSTBEP00000014805.1 Tupaia belangeri 65 1e-117 421
WERAM-Cae-0008 C10E2.3a Caenorhabditis elegans 47 8e-107 385
WERAM-Chh-0086 ENSCHOP00000009630.1 Choloepus hoffmanni 58 7e-102 369
WERAM-Cis-0060 ENSCSAVP00000013851.1 Ciona savignyi 53 1e-89 328
WERAM-Sol-0055 Solyc03g115150.2.1 Solanum lycopersicum 40 4e-77 287
WERAM-Php-0085 PP1S34_252V6.1 Physcomitrella patens 45 6e-77 286
WERAM-Sem-0022 EFJ08599 Selaginella moellendorffii 41 7e-77 286
WERAM-Brr-0181 Bra035942.1-P Brassica rapa 42 5e-76 283
WERAM-Bro-0168 Bo9g014470.1 Brassica oleracea 42 5e-76 283
WERAM-Lep-0079 LPERR07G18450.1 Leersia perrieri 40 1e-75 282
Created Date 25-Jun-2016